AT2G16570

Glutamine phosphoribosylpyrophosphate amidotransferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
7180142 .. 7182287
2146 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G16570.1

Sequence Viewer

Length: 1701 bp
ATGGCGGCCACAACAAGCTTCTCCTCTTCCCTCTCTTTAATCACTAAACCAAACAATTCTTCTTACACCAATCAACCTCTCCCTCTCTTCCCCAAACCCTTCCTTAAACCTCCCCATCTCTCTCTCCTTCCTTCTCCCCTCTCCTCTCCTCCTCCTTCACTCATCCATGGAGTCTCCTCCTACTTCTCCTCTCCTTCACCATCCGAAGACAATTCTCATACCCCTTTTGATTACCACAACGACGAAGACGACGAAAAGCCTCGAGAAGAGTGCGGTGTCGTTGGAATCTATGGAGATCCAGAAGCTTCACGGCTCTGTTACTTAGCTCTCCACGCACTTCAACATCGTGGTCAAGAAGGTGCAGGTATTGTAACAGTTAGTCCCGAGAAAGTTCTTCAAACCATTACAGGTGTTGGTTTAGTCTCTGAGGTTTTCAACGAATCAAAACTTGATCAATTACCTGGTGAATTTGCTATTGGTCATGTTCGTTACTCAACAGCTGGAGCTTCTATGCTCAAGAACGTTCAGCCTTTCGTCGCCGGTTATCGATTCGGTTCTATCGGTGTTGCCCACAATGGTAATTTAGTAAATTACAAAACTTTGAGAGCTATGCTTGAAGAGAACGGTTCTATCTTCAATACTAGCTCTGATACTGAGGTTGTGCTTCATTTGATTGCTATTTCTAAAGCTAGACCTTTTTTTATGAGGATTATTGATGCTTGTGAGAAACTTCAAGGTGCTTATTCAATGGTGTTTGTTACTGAGGATAAGCTTGTTGCTGTTCGTGATCCTTATGGGTTTAGACCGTTAGTTATGGGTAGGAGAAGTAATGGAGCTGTTGTTTTCGCTTCGGAGACTTGTGCTCTTGATTTGATTGAAGCTACTTATGAGAGAGAGGTTTATCCTGGTGAGGTTTTGGTTGTGGATAAGGATGGTGTCAAGTCTCAGTGTTTGATGCCCAAGTTTGAGCCTAAGCAATGTATTTTCGAACATATCTACTTCTCGTTGCCTAACTCGATTGTGTTTGGTCGGTCCGTGTATGAATCTAGGCATGTTTTTGGTGAGATTTTGGCTACCGAGTCGCCTGTTGAGTGCGATGTTGTCATCGCTGTGCCTGACTCTGGTGTTGTGGCTGCTCTCGGGTACGCTGCGAAATCCGGTGTGCCGTTTCAACAGGGGTTGATTAGGTCTCATTACGTAGGGAGGACGTTCATTGAGCCGTCACAGAAGATTAGAGACTTTGGTGTGAAGCTTAAGTTGTCTCCTGTTCGTGGTGTTTTAGAAGGGAAGAGAGTTGTTGTGGTGGATGATTCGATTGTTAGAGGCACAACTTCGTCTAAGATTGTGCGTTTATTGAGAGAAGCTGGTGCAAAAGAGGTTCATATGAGGATTGCTAGTCCTCCTATAGTAGCTTCTTGTTACTATGGTGTTGATACGCCTAGCTCAGAGGAGTTGATATCCAATAGATTGAGTGTTGAGGAGATTAACGAGTTCATCGGGAGTGACTCTCTTGCGTTTCTATCGTTCGATACGTTGAAGAAACACTTGGGGAAAGACTCTAAGAGCTTCTGCTATGCGTGCTTCACGGGTGACTATCCCGTGAAGCCAACAGAAGTTAAGGTGAAACGAGGAGGAGGGGATTTCATTGATGACGGTCTCGTTGGTAGCTTCGAAAACATCGAAGCAGGTTGGGTTCGATAA

Protein Analysis

566

Amino Acids

61.84

Weight (kDa)

5.84

Isoelectric Point (pI)

49.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GATase_6 PF13522 155 - 285 5.9e-20 Glutamine amidotransferase domain
GATase_7 PF13537 172 - 289 1.1e-22 Glutamine amidotransferase domain
Pribosyltran PF00156 353 - 461 1e-08 Phosphoribosyl transferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 353, 1676
AciI CCGC 2 cut(s) 5, 273
AclI AACGTT 1 cut(s) 522
AclWI GGATC 2 cut(s) 290, 782
AcoI YGGCCR 1 cut(s) 6
AcsI RAATTY 1 cut(s) 467
AfaI GTAC 1 cut(s) 1145
AfiI CCNNNNNNNGG 2 cut(s) 1121, 1271
AflII CTTAAG 1 cut(s) 1253
AjnI CCWGG 2 cut(s) 460, 904
AjuI GAANNNNNNNTTGG 6 cut(s) 43, 75, 459, 491, 1529, 1561
Alw21I GWGCWC 1 cut(s) 865
Alw26I GTCTC 8 cut(s) 178, 427, 848, 948, 1194, 1230, 1266, 1661
AlwI GGATC 2 cut(s) 290, 782
Ama87I CYCGRG 3 cut(s) 261, 383, 1139
AoxI GGCC 1 cut(s) 6
ApeKI GCWGC 2 cut(s) 1133, 1148
ApoI RAATTY 1 cut(s) 467
AspS9I GGNCC 1 cut(s) 1032
AsuHPI GGTGA 6 cut(s) 189, 476, 920, 1073, 1601, 1633
AsuII TTCGAA 2 cut(s) 987, 1671
AvaI CYCGRG 3 cut(s) 261, 383, 1139
AvaII GGWCC 1 cut(s) 1032
BaeI ACNNNNGTAYC 2 cut(s) 642, 675
BbsI GAAGAC 2 cut(s) 213, 252
Bbv12I GWGCWC 1 cut(s) 865
BbvI GCAGC 2 cut(s) 1120, 1135
BccI CCATC 3 cut(s) 123, 208, 926
BceAI ACGGC 3 cut(s) 326, 1150, 1204
BcgI CGANNNNNNTGC 2 cut(s) 252, 286
BciT130I CCWGG 2 cut(s) 462, 906
BclI TGATCA 1 cut(s) 451
BcoDI GTCTC 8 cut(s) 178, 427, 848, 948, 1194, 1230, 1266, 1661
BfaI CTAG 5 cut(s) 642, 690, 1047, 1395, 1440
BfmI CTRYAG 1 cut(s) 1404
BfrI CTTAAG 1 cut(s) 1253
BfuAI ACCTGC 2 cut(s) 353, 1676
BisI GCNGC 3 cut(s) 6, 1134, 1149
BlsI GCNGC 3 cut(s) 7, 1135, 1150
Bme1390I CCNGG 2 cut(s) 462, 906
Bme18I GGWCC 1 cut(s) 1032
BmeT110I CYCGRG 3 cut(s) 261, 383, 1139
BmgT120I GGNCC 1 cut(s) 1032
BmrFI CCNGG 2 cut(s) 462, 906
BmsI GCATC 2 cut(s) 706, 945
BpiI GAAGAC 2 cut(s) 213, 252
BplI GAGNNNNNCTC 2 cut(s) 1492, 1524
BpmI CTGGAG 1 cut(s) 522
Bpu10I CCTNAGC 1 cut(s) 972
Bpu14I TTCGAA 2 cut(s) 987, 1671
BpuEI CTTGAG 1 cut(s) 500
Bsa29I ATCGAT 1 cut(s) 547
BsaAI YACGTR 1 cut(s) 1198
BsaI GGTCTC 2 cut(s) 1194, 1661
BsaJI CCNNGG 1 cut(s) 166
BsaWI WCCGGW 1 cut(s) 1157
BsaXI ACNNNNNCTCC 2 cut(s) 825, 855
Bsc4I CCNNNNNNNGG 2 cut(s) 1121, 1271
Bse118I RCCGGY 1 cut(s) 539
Bse3DI GCAATG 1 cut(s) 983
BseBI CCWGG 2 cut(s) 462, 906
BseCI ATCGAT 1 cut(s) 547
BseDI CCNNGG 1 cut(s) 166
BseGI GGATG 4 cut(s) 162, 200, 937, 1312
BseLI CCNNNNNNNGG 2 cut(s) 1121, 1271
BseMI GCAATG 1 cut(s) 983
BseMII CTCAG 5 cut(s) 417, 645, 753, 959, 1458
BseXI GCAGC 2 cut(s) 1120, 1135
BsgI GTGCAG 1 cut(s) 381
BshFI GGCC 1 cut(s) 8
BshVI ATCGAT 1 cut(s) 547
BsiHKAI GWGCWC 1 cut(s) 865
BsiHKCI CYCGRG 3 cut(s) 261, 383, 1139
BsiSI CCGG 2 cut(s) 540, 1158
BslFI GGGAC 1 cut(s) 366
BslI CCNNNNNNNGG 2 cut(s) 1121, 1271
BsmAI GTCTC 8 cut(s) 178, 427, 848, 948, 1194, 1230, 1266, 1661
BsmFI GGGAC 1 cut(s) 366
BsnI GGCC 1 cut(s) 8
Bso31I GGTCTC 2 cut(s) 1194, 1661
BsoBI CYCGRG 3 cut(s) 261, 383, 1139
Bsp119I TTCGAA 2 cut(s) 987, 1671
Bsp1286I GDGCHC 1 cut(s) 865
Bsp143I GATC 3 cut(s) 295, 451, 787
Bsp19I CCATGG 1 cut(s) 166
BspACI CCGC 2 cut(s) 5, 273
BspANI GGCC 1 cut(s) 8
BspCNI CTCAG 5 cut(s) 418, 646, 754, 958, 1457
BspDI ATCGAT 1 cut(s) 547
BspMI ACCTGC 2 cut(s) 353, 1676
BspPI GGATC 2 cut(s) 290, 782
BspT104I TTCGAA 2 cut(s) 987, 1671
BspTI CTTAAG 1 cut(s) 1253
BspTNI GGTCTC 2 cut(s) 1194, 1661
BsrDI GCAATG 1 cut(s) 983
BsrFI RCCGGY 1 cut(s) 539
BssAI RCCGGY 1 cut(s) 539
BssECI CCNNGG 1 cut(s) 166
BssMI GATC 3 cut(s) 295, 451, 787
BssT1I CCWWGG 1 cut(s) 166
Bst2UI CCWGG 2 cut(s) 462, 906
Bst4CI ACNGT 4 cut(s) 376, 626, 807, 1655
Bst6I CTCTTC 5 cut(s) 31, 92, 261, 612, 1283
BstAFI CTTAAG 1 cut(s) 1253
BstBAI YACGTR 1 cut(s) 1198
BstBI TTCGAA 2 cut(s) 987, 1671
BstC8I GCNNGC 1 cut(s) 1579
BstDEI CTNAG 9 cut(s) 322, 426, 654, 762, 945, 972, 1338, 1444, 1560
BstDSI CCRYGG 1 cut(s) 166
BstF5I GGATG 4 cut(s) 162, 200, 937, 1312
BstKTI GATC 3 cut(s) 298, 454, 790
BstMAI GTCTC 8 cut(s) 178, 427, 848, 948, 1194, 1230, 1266, 1661
BstMBI GATC 3 cut(s) 295, 451, 787
BstMWI GCNNNNNNNGC 2 cut(s) 332, 1578
BstNI CCWGG 2 cut(s) 462, 906
BstNSI RCATGY 1 cut(s) 1055
BstSCI CCNGG 2 cut(s) 460, 904
BstSFI CTRYAG 1 cut(s) 1404
BstSNI TACGTA 1 cut(s) 1198
BstV1I GCAGC 2 cut(s) 1120, 1135
BstV2I GAAGAC 2 cut(s) 213, 252
BstX2I RGATCY 1 cut(s) 295
BstYI RGATCY 1 cut(s) 295
Bsu15I ATCGAT 1 cut(s) 547
BsuRI GGCC 1 cut(s) 8
BsuTUI ATCGAT 1 cut(s) 547
BtgI CCRYGG 1 cut(s) 166
BtgZI GCGATG 2 cut(s) 1090, 1110
BtsCI GGATG 4 cut(s) 162, 200, 937, 1312
BtsIMutI CAGTG 1 cut(s) 953
BveI ACCTGC 2 cut(s) 353, 1676
Cac8I GCNNGC 1 cut(s) 1579
Cfr10I RCCGGY 1 cut(s) 539
Cfr13I GGNCC 1 cut(s) 1032
ClaI ATCGAT 1 cut(s) 547
CpoI CGGWCCG 1 cut(s) 1032
CsiI ACCWGGT 1 cut(s) 460
Csp6I GTAC 1 cut(s) 1144
CspI CGGWCCG 1 cut(s) 1032
CviAII CATG 3 cut(s) 167, 482, 1052
CviQI GTAC 1 cut(s) 1144
DdeI CTNAG 9 cut(s) 322, 426, 654, 762, 945, 972, 1338, 1444, 1560
DpnI GATC 3 cut(s) 297, 453, 789
DpnII GATC 3 cut(s) 295, 451, 787
EaeI YGGCCR 1 cut(s) 6
Eam1104I CTCTTC 5 cut(s) 31, 92, 261, 612, 1283
EarI CTCTTC 5 cut(s) 31, 92, 261, 612, 1283
Eco105I TACGTA 1 cut(s) 1198
Eco130I CCWWGG 1 cut(s) 166
Eco31I GGTCTC 2 cut(s) 1194, 1661
Eco32I GATATC 1 cut(s) 1458
Eco47I GGWCC 1 cut(s) 1032
Eco88I CYCGRG 3 cut(s) 261, 383, 1139
EcoRII CCWGG 2 cut(s) 460, 904
EcoRV GATATC 1 cut(s) 1458
EcoT14I CCWWGG 1 cut(s) 166
ErhI CCWWGG 1 cut(s) 166
FaeI CATG 3 cut(s) 170, 485, 1055
FalI AAGNNNNNCTT 2 cut(s) 1529, 1561
FaqI GGGAC 1 cut(s) 366
FatI CATG 3 cut(s) 166, 481, 1051
FauNDI CATATG 1 cut(s) 1383
FbaI TGATCA 1 cut(s) 451
Fnu4HI GCNGC 3 cut(s) 6, 1134, 1149
FokI GGATG 4 cut(s) 149, 187, 944, 1319
Fsp4HI GCNGC 3 cut(s) 6, 1134, 1149
FspBI CTAG 5 cut(s) 642, 690, 1047, 1395, 1440
GluI GCNGC 3 cut(s) 6, 1134, 1149
GsuI CTGGAG 1 cut(s) 522
HaeIII GGCC 1 cut(s) 8
HapII CCGG 2 cut(s) 540, 1158
Hin1II CATG 3 cut(s) 170, 485, 1055
HindIII AAGCTT 4 cut(s) 16, 303, 770, 1250
HpaII CCGG 2 cut(s) 540, 1158
HphI GGTGA 6 cut(s) 189, 476, 920, 1073, 1601, 1633
Hpy188I TCNGA 5 cut(s) 205, 427, 649, 853, 1447
Hpy188III TCNNGA 8 cut(s) 263, 299, 353, 383, 517, 785, 866, 1498
Hpy99I CGWCG 3 cut(s) 245, 254, 539
HpyAV CCTTC 7 cut(s) 109, 137, 141, 165, 204, 350, 1277
HpyCH4III ACNGT 4 cut(s) 376, 626, 807, 1655
HpyCH4IV ACGT 4 cut(s) 522, 1197, 1208, 1532
HpyCH4V TGCA 2 cut(s) 362, 1370
HpyF10VI GCNNNNNNNGC 2 cut(s) 332, 1578
HpyF3I CTNAG 9 cut(s) 322, 426, 654, 762, 945, 972, 1338, 1444, 1560
HpySE526I ACGT 4 cut(s) 522, 1197, 1208, 1532
Hsp92II CATG 3 cut(s) 170, 485, 1055
Ksp22I TGATCA 1 cut(s) 451
Kzo9I GATC 3 cut(s) 295, 451, 787
LmnI GCTCC 2 cut(s) 503, 833
Lsp1109I GCAGC 2 cut(s) 1120, 1135
LweI GCATC 2 cut(s) 706, 945
MabI ACCWGGT 1 cut(s) 460
MaeI CTAG 5 cut(s) 642, 690, 1047, 1395, 1440
MaeII ACGT 4 cut(s) 522, 1197, 1208, 1532
MaeIII GTNAC 8 cut(s) 317, 370, 488, 757, 1221, 1418, 1502, 1589
MalI GATC 3 cut(s) 297, 453, 789
MboI GATC 3 cut(s) 295, 451, 787
MflI RGATCY 1 cut(s) 295
MhlI GDGCHC 1 cut(s) 865
MluCI AATT 6 cut(s) 55, 211, 455, 467, 580, 589
MlyI GAGTC 5 cut(s) 180, 1088, 1112, 1499, 1550
MmeI TCCRAC 1 cut(s) 262
MseI TTAA 5 cut(s) 38, 105, 1254, 1485, 1617
MslI CAYNNNNRTG 1 cut(s) 1109
MspA1I CMGCKG 1 cut(s) 500
MspCI CTTAAG 1 cut(s) 1253
MspI CCGG 2 cut(s) 540, 1158
MspR9I CCNGG 2 cut(s) 462, 906
MvaI CCWGG 2 cut(s) 462, 906
MwoI GCNNNNNNNGC 2 cut(s) 332, 1578
NcoI CCATGG 1 cut(s) 166
NdeI CATATG 1 cut(s) 1383
NdeII GATC 3 cut(s) 295, 451, 787
NlaIII CATG 3 cut(s) 170, 485, 1055
NmuCI GTSAC 3 cut(s) 1221, 1502, 1589
NspI RCATGY 1 cut(s) 1055
NspV TTCGAA 2 cut(s) 987, 1671
PaeR7I CTCGAG 1 cut(s) 261
PcsI WCGNNNNNNNCGW 4 cut(s) 246, 249, 1529, 1677
PfeI GAWTC 5 cut(s) 285, 440, 549, 1043, 1310
PkrI GCNGC 3 cut(s) 7, 1135, 1150
PleI GAGTC 5 cut(s) 179, 1087, 1112, 1499, 1550
PpsI GAGTC 5 cut(s) 179, 1087, 1112, 1499, 1550
Ppu21I YACGTR 1 cut(s) 1198
Psp1406I AACGTT 1 cut(s) 522
Psp6I CCWGG 2 cut(s) 460, 904
PspGI CCWGG 2 cut(s) 460, 904
PspPI GGNCC 1 cut(s) 1032
PsuI RGATCY 1 cut(s) 295
PvuII CAGCTG 1 cut(s) 500
RsaI GTAC 1 cut(s) 1145
RsaNI GTAC 1 cut(s) 1144
RseI CAYNNNNRTG 1 cut(s) 1109
Rsr2I CGGWCCG 1 cut(s) 1032
RsrII CGGWCCG 1 cut(s) 1032
SaqAI TTAA 5 cut(s) 38, 105, 1254, 1485, 1617
SatI GCNGC 3 cut(s) 6, 1134, 1149
Sau3AI GATC 3 cut(s) 295, 451, 787
Sau96I GGNCC 1 cut(s) 1032
SchI GAGTC 5 cut(s) 180, 1088, 1112, 1499, 1550
ScrFI CCNGG 2 cut(s) 462, 906
SduI GDGCHC 1 cut(s) 865
SexAI ACCWGGT 1 cut(s) 460
SfaNI GCATC 2 cut(s) 706, 945
SfcI CTRYAG 1 cut(s) 1404
Sfr274I CTCGAG 1 cut(s) 261
SfuI TTCGAA 2 cut(s) 987, 1671
SinI GGWCC 1 cut(s) 1032
SlaI CTCGAG 1 cut(s) 261
SmiMI CAYNNNNRTG 1 cut(s) 1109
SmlI CTYRAG 3 cut(s) 261, 515, 1253
SmoI CTYRAG 3 cut(s) 261, 515, 1253
SnaBI TACGTA 1 cut(s) 1198
Sse9I AATT 6 cut(s) 55, 211, 455, 467, 580, 589
SsiI CCGC 2 cut(s) 5, 273
SspMI CTAG 5 cut(s) 642, 690, 1047, 1395, 1440
StyD4I CCNGG 2 cut(s) 460, 904
StyI CCWWGG 1 cut(s) 166
TaaI ACNGT 4 cut(s) 376, 626, 807, 1655
TaiI ACGT 4 cut(s) 525, 1200, 1211, 1535
TaqI TCGA 9 cut(s) 262, 547, 987, 1016, 1313, 1527, 1671, 1680, 1696
TaqII GACCGA 1 cut(s) 1020
TasI AATT 6 cut(s) 55, 211, 455, 467, 580, 589
TauI GCSGC 1 cut(s) 8
TfiI GAWTC 5 cut(s) 285, 440, 549, 1043, 1310
Tru1I TTAA 5 cut(s) 38, 105, 1254, 1485, 1617
Tru9I TTAA 5 cut(s) 38, 105, 1254, 1485, 1617
TscAI CASTG 1 cut(s) 953
TseFI GTSAC 3 cut(s) 1221, 1502, 1589
TseI GCWGC 2 cut(s) 1133, 1148
Tsp45I GTSAC 3 cut(s) 1221, 1502, 1589
TspDTI ATGAA 6 cut(s) 656, 1056, 1201, 1370, 1483, 1633
TspGWI ACGGA 1 cut(s) 1024
TspRI CASTG 1 cut(s) 953
Vha464I CTTAAG 1 cut(s) 1253
VpaK11BI GGWCC 1 cut(s) 1032
XapI RAATTY 1 cut(s) 467
XceI RCATGY 1 cut(s) 1055
XhoI CTCGAG 1 cut(s) 261
XspI CTAG 5 cut(s) 642, 690, 1047, 1395, 1440
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.