NB-ARC domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 45 - 183 | 3.3e-09 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 254 - 321 | 2e-18 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_3 | PF07725 | 437 - 456 | 1.2e-09 | Leucine Rich Repeat |
| LRR_14 | PF23598 | 494 - 602 | 6.7e-09 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 599 - 652 | 4.9e-07 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 819 - 878 | 6.5e-07 | Leucine-rich repeat region |
| TIR | PF01582 | 1156 - 1299 | 1.4e-23 | TIR domain |
| TIR_2 | PF13676 | 1158 - 1252 | 1.6e-08 | TIR domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 3 cut(s) | 544, 2763, 3968 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 866 |
| AccI | GTMKAC | 1 cut(s) | 3162 |
| AccIII | TCCGGA | 1 cut(s) | 332 |
| AciI | CCGC | 3 cut(s) | 139, 818, 2551 |
| AclI | AACGTT | 1 cut(s) | 3942 |
| AclWI | GGATC | 9 cut(s) | 89, 931, 1295, 2067, 2157, 2508, 2834, 3250, 4051 |
| AcsI | RAATTY | 5 cut(s) | 257, 1118, 1206, 1574, 2330 |
| AcuI | CTGAAG | 7 cut(s) | 119, 787, 1098, 1190, 1211, 2192, 3376 |
| AcyI | GRCGYC | 1 cut(s) | 477 |
| AfaI | GTAC | 5 cut(s) | 462, 1072, 1477, 1621, 3664 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 170, 866, 1264, 2557, 3297, 3723, 3807, 3808, 3913 |
| AflII | CTTAAG | 1 cut(s) | 2339 |
| AflIII | ACRYGT | 4 cut(s) | 862, 1104, 2299, 2988 |
| AhlI | ACTAGT | 2 cut(s) | 22, 463 |
| AjiI | CACGTC | 2 cut(s) | 2286, 4054 |
| AjnI | CCWGG | 4 cut(s) | 163, 421, 1189, 3906 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 861, 893 |
| Alw21I | GWGCWC | 1 cut(s) | 1974 |
| Alw26I | GTCTC | 6 cut(s) | 1236, 2018, 2276, 3013, 3856, 4044 |
| AlwI | GGATC | 9 cut(s) | 89, 931, 1295, 2067, 2157, 2508, 2834, 3250, 4051 |
| Ama87I | CYCGRG | 2 cut(s) | 3238, 3503 |
| Aor13HI | TCCGGA | 1 cut(s) | 332 |
| ApeKI | GCWGC | 4 cut(s) | 141, 194, 1962, 2160 |
| ApoI | RAATTY | 5 cut(s) | 257, 1118, 1206, 1574, 2330 |
| AseI | ATTAAT | 1 cut(s) | 1530 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 1224, 1575, 2103, 2598, 3078 |
| AspA2I | CCTAGG | 1 cut(s) | 2182 |
| AspLEI | GCGC | 3 cut(s) | 545, 2764, 3969 |
| AspS9I | GGNCC | 4 cut(s) | 419, 1821, 2226, 3188 |
| AsuHPI | GGTGA | 6 cut(s) | 227, 910, 1070, 2260, 3339, 3803 |
| AsuII | TTCGAA | 1 cut(s) | 2130 |
| AvaI | CYCGRG | 2 cut(s) | 3238, 3503 |
| AvaII | GGWCC | 4 cut(s) | 419, 1821, 2226, 3188 |
| AvrII | CCTAGG | 1 cut(s) | 2182 |
| BanII | GRGCYC | 1 cut(s) | 1974 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1714, 1746 |
| BbsI | GAAGAC | 3 cut(s) | 36, 3255, 3842 |
| Bbv12I | GWGCWC | 1 cut(s) | 1974 |
| BbvI | GCAGC | 4 cut(s) | 153, 206, 1949, 2147 |
| BccI | CCATC | 8 cut(s) | 913, 1381, 1849, 2053, 2216, 3026, 3381, 3747 |
| BceAI | ACGGC | 2 cut(s) | 1265, 3348 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1549, 1583, 2572, 2606 |
| BciT130I | CCWGG | 4 cut(s) | 165, 423, 1191, 3908 |
| BciVI | GTATCC | 2 cut(s) | 146, 1991 |
| BcoDI | GTCTC | 6 cut(s) | 1236, 2018, 2276, 3013, 3856, 4044 |
| BcuI | ACTAGT | 2 cut(s) | 22, 463 |
| BfmI | CTRYAG | 5 cut(s) | 85, 975, 2786, 2959, 3459 |
| BfrI | CTTAAG | 1 cut(s) | 2339 |
| BfuI | GTATCC | 2 cut(s) | 146, 1991 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3332 |
| BglII | AGATCT | 2 cut(s) | 1411, 1783 |
| BisI | GCNGC | 4 cut(s) | 142, 195, 1963, 2161 |
| BlnI | CCTAGG | 1 cut(s) | 2182 |
| BlpI | GCTNAGC | 1 cut(s) | 522 |
| BlsI | GCNGC | 4 cut(s) | 143, 196, 1964, 2162 |
| BmcAI | AGTACT | 1 cut(s) | 462 |
| Bme1390I | CCNGG | 4 cut(s) | 165, 423, 1191, 3908 |
| Bme18I | GGWCC | 4 cut(s) | 419, 1821, 2226, 3188 |
| BmeT110I | CYCGRG | 2 cut(s) | 3238, 3503 |
| BmgBI | CACGTC | 2 cut(s) | 2286, 4054 |
| BmgT120I | GGNCC | 4 cut(s) | 419, 1821, 2226, 3188 |
| BmiI | GGNNCC | 8 cut(s) | 428, 1363, 1595, 1822, 2000, 2227, 2921, 3371 |
| BmrFI | CCNGG | 4 cut(s) | 165, 423, 1191, 3908 |
| BmrI | ACTGGG | 3 cut(s) | 1270, 1632, 3817 |
| BmuI | ACTGGG | 3 cut(s) | 1270, 1632, 3817 |
| BpiI | GAAGAC | 3 cut(s) | 36, 3255, 3842 |
| BpmI | CTGGAG | 3 cut(s) | 580, 1754, 2709 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1973 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 522 |
| Bpu14I | TTCGAA | 1 cut(s) | 2130 |
| BpuEI | CTTGAG | 4 cut(s) | 683, 1394, 2448, 2474 |
| Bsa29I | ATCGAT | 1 cut(s) | 1461 |
| BsaAI | YACGTR | 1 cut(s) | 826 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2088 |
| BsaHI | GRCGYC | 1 cut(s) | 477 |
| BsaI | GGTCTC | 1 cut(s) | 2018 |
| BsaJI | CCNNGG | 9 cut(s) | 422, 1468, 1589, 1710, 1994, 2182, 2412, 2866, 3504 |
| BsaWI | WCCGGW | 2 cut(s) | 332, 3082 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1239, 1269 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 170, 866, 1264, 2557, 3297, 3723, 3807, 3808, 3913 |
| Bse118I | RCCGGY | 1 cut(s) | 2969 |
| Bse1I | ACTGG | 5 cut(s) | 563, 1265, 1627, 2076, 3812 |
| Bse3DI | GCAATG | 4 cut(s) | 33, 789, 2578, 2692 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2088 |
| BseAI | TCCGGA | 1 cut(s) | 332 |
| BseBI | CCWGG | 4 cut(s) | 165, 423, 1191, 3908 |
| BseCI | ATCGAT | 1 cut(s) | 1461 |
| BseDI | CCNNGG | 9 cut(s) | 422, 1468, 1589, 1710, 1994, 2182, 2412, 2866, 3504 |
| BseJI | GATNNNNATC | 1 cut(s) | 2088 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 170, 866, 1264, 2557, 3297, 3723, 3807, 3808, 3913 |
| BseMI | GCAATG | 4 cut(s) | 33, 789, 2578, 2692 |
| BseMII | CTCAG | 8 cut(s) | 734, 1534, 1980, 1987, 2443, 2518, 3552, 3740 |
| BseNI | ACTGG | 5 cut(s) | 563, 1265, 1627, 2076, 3812 |
| BseRI | GAGGAG | 4 cut(s) | 686, 1648, 2244, 3929 |
| BseXI | GCAGC | 4 cut(s) | 153, 206, 1949, 2147 |
| BseYI | CCCAGC | 1 cut(s) | 1817 |
| BsgI | GTGCAG | 1 cut(s) | 488 |
| BshVI | ATCGAT | 1 cut(s) | 1461 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1974 |
| BsiHKCI | CYCGRG | 2 cut(s) | 3238, 3503 |
| BsiSI | CCGG | 3 cut(s) | 333, 2970, 3083 |
| BslFI | GGGAC | 6 cut(s) | 1019, 1834, 2239, 3290, 3389, 3486 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 170, 866, 1264, 2557, 3297, 3723, 3807, 3808, 3913 |
| BsmAI | GTCTC | 6 cut(s) | 1236, 2018, 2276, 3013, 3856, 4044 |
| BsmBI | CGTCTC | 2 cut(s) | 2276, 4044 |
| BsmFI | GGGAC | 6 cut(s) | 1019, 1834, 2239, 3290, 3389, 3486 |
| BsmI | GAATGC | 3 cut(s) | 2638, 2810, 2831 |
| Bso31I | GGTCTC | 1 cut(s) | 2018 |
| BsoBI | CYCGRG | 2 cut(s) | 3238, 3503 |
| Bsp119I | TTCGAA | 1 cut(s) | 2130 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1974 |
| Bsp13I | TCCGGA | 1 cut(s) | 332 |
| Bsp1407I | TGTACA | 1 cut(s) | 1475 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 522 |
| Bsp19I | CCATGG | 2 cut(s) | 1710, 2412 |
| BspACI | CCGC | 3 cut(s) | 139, 818, 2551 |
| BspCNI | CTCAG | 8 cut(s) | 733, 1533, 1979, 1986, 2442, 2517, 3551, 3741 |
| BspDI | ATCGAT | 1 cut(s) | 1461 |
| BspEI | TCCGGA | 1 cut(s) | 332 |
| BspHI | TCATGA | 1 cut(s) | 2215 |
| BspLI | GGNNCC | 8 cut(s) | 428, 1363, 1595, 1822, 2000, 2227, 2921, 3371 |
| BspMAI | CTGCAG | 1 cut(s) | 2790 |
| BspPI | GGATC | 9 cut(s) | 89, 931, 1295, 2067, 2157, 2508, 2834, 3250, 4051 |
| BspQI | GCTCTTC | 2 cut(s) | 767, 1230 |
| BspT104I | TTCGAA | 1 cut(s) | 2130 |
| BspTI | CTTAAG | 1 cut(s) | 2339 |
| BspTNI | GGTCTC | 1 cut(s) | 2018 |
| BsrDI | GCAATG | 4 cut(s) | 33, 789, 2578, 2692 |
| BsrFI | RCCGGY | 1 cut(s) | 2969 |
| BsrGI | TGTACA | 1 cut(s) | 1475 |
| BsrI | ACTGG | 5 cut(s) | 563, 1265, 1627, 2076, 3812 |
| BssAI | RCCGGY | 1 cut(s) | 2969 |
| BssECI | CCNNGG | 9 cut(s) | 422, 1468, 1589, 1710, 1994, 2182, 2412, 2866, 3504 |
| BssNI | GRCGYC | 1 cut(s) | 477 |
| BssT1I | CCWWGG | 5 cut(s) | 1468, 1589, 1710, 2182, 2412 |
| Bst2UI | CCWGG | 4 cut(s) | 165, 423, 1191, 3908 |
| Bst6I | CTCTTC | 4 cut(s) | 767, 1230, 1239, 3906 |
| BstACI | GRCGYC | 1 cut(s) | 477 |
| BstAFI | CTTAAG | 1 cut(s) | 2339 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2759 |
| BstAUI | TGTACA | 1 cut(s) | 1475 |
| BstBAI | YACGTR | 1 cut(s) | 826 |
| BstBI | TTCGAA | 1 cut(s) | 2130 |
| BstC8I | GCNNGC | 1 cut(s) | 3684 |
| BstDSI | CCRYGG | 3 cut(s) | 1710, 1994, 2412 |
| BstHHI | GCGC | 3 cut(s) | 545, 2764, 3969 |
| BstMAI | GTCTC | 6 cut(s) | 1236, 2018, 2276, 3013, 3856, 4044 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 147, 194, 700, 2703, 2759, 3332 |
| BstNI | CCWGG | 4 cut(s) | 165, 423, 1191, 3908 |
| BstNSI | RCATGY | 8 cut(s) | 781, 866, 995, 1108, 1330, 2303, 2992, 3989 |
| BstSCI | CCNGG | 4 cut(s) | 163, 421, 1189, 3906 |
| BstSFI | CTRYAG | 5 cut(s) | 85, 975, 2786, 2959, 3459 |
| BstV1I | GCAGC | 4 cut(s) | 153, 206, 1949, 2147 |
| BstV2I | GAAGAC | 3 cut(s) | 36, 3255, 3842 |
| BstX2I | RGATCY | 6 cut(s) | 81, 1411, 1783, 2059, 2149, 2500 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 212, 947 |
| BstYI | RGATCY | 6 cut(s) | 81, 1411, 1783, 2059, 2149, 2500 |
| Bsu15I | ATCGAT | 1 cut(s) | 1461 |
| BsuI | GTATCC | 2 cut(s) | 146, 1991 |
| BsuTUI | ATCGAT | 1 cut(s) | 1461 |
| BtgI | CCRYGG | 3 cut(s) | 1710, 1994, 2412 |
| BtrI | CACGTC | 2 cut(s) | 2286, 4054 |
| BtsI | GCAGTG | 2 cut(s) | 476, 2092 |
| BtsIMutI | CAGTG | 6 cut(s) | 476, 1258, 2092, 2512, 3120, 3400 |
| Cac8I | GCNNGC | 1 cut(s) | 3684 |
| CciI | TCATGA | 1 cut(s) | 2215 |
| CfoI | GCGC | 3 cut(s) | 545, 2764, 3969 |
| Cfr10I | RCCGGY | 1 cut(s) | 2969 |
| Cfr13I | GGNCC | 4 cut(s) | 419, 1821, 2226, 3188 |
| ClaI | ATCGAT | 1 cut(s) | 1461 |
| CseI | GACGC | 2 cut(s) | 398, 466 |
| Csp6I | GTAC | 5 cut(s) | 461, 1071, 1476, 1620, 3663 |
| CviQI | GTAC | 5 cut(s) | 461, 1071, 1476, 1620, 3663 |
| DraI | TTTAAA | 3 cut(s) | 507, 2013, 4029 |
| Eam1104I | CTCTTC | 4 cut(s) | 767, 1230, 1239, 3906 |
| EarI | CTCTTC | 4 cut(s) | 767, 1230, 1239, 3906 |
| EciI | GGCGGA | 1 cut(s) | 833 |
| Ecl136II | GAGCTC | 1 cut(s) | 1972 |
| Eco130I | CCWWGG | 5 cut(s) | 1468, 1589, 1710, 2182, 2412 |
| Eco24I | GRGCYC | 1 cut(s) | 1974 |
| Eco31I | GGTCTC | 1 cut(s) | 2018 |
| Eco47I | GGWCC | 4 cut(s) | 419, 1821, 2226, 3188 |
| Eco53kI | GAGCTC | 1 cut(s) | 1972 |
| Eco57I | CTGAAG | 7 cut(s) | 119, 787, 1098, 1190, 1211, 2192, 3376 |
| Eco88I | CYCGRG | 2 cut(s) | 3238, 3503 |
| EcoICRI | GAGCTC | 1 cut(s) | 1972 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1821 |
| EcoRI | GAATTC | 1 cut(s) | 1206 |
| EcoRII | CCWGG | 4 cut(s) | 163, 421, 1189, 3906 |
| EcoT14I | CCWWGG | 5 cut(s) | 1468, 1589, 1710, 2182, 2412 |
| EcoT22I | ATGCAT | 4 cut(s) | 930, 1155, 3018, 3997 |
| EcoT38I | GRGCYC | 1 cut(s) | 1974 |
| ErhI | CCWWGG | 5 cut(s) | 1468, 1589, 1710, 2182, 2412 |
| Esp3I | CGTCTC | 2 cut(s) | 2276, 4044 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 246, 278 |
| FaqI | GGGAC | 6 cut(s) | 1019, 1834, 2239, 3290, 3389, 3486 |
| FauNDI | CATATG | 1 cut(s) | 152 |
| FblI | GTMKAC | 1 cut(s) | 3162 |
| Fnu4HI | GCNGC | 4 cut(s) | 142, 195, 1963, 2161 |
| FriOI | GRGCYC | 1 cut(s) | 1974 |
| Fsp4HI | GCNGC | 4 cut(s) | 142, 195, 1963, 2161 |
| FspAI | RTGCGCAY | 2 cut(s) | 544, 3968 |
| FspI | TGCGCA | 3 cut(s) | 544, 2763, 3968 |
| GlaI | GCGC | 3 cut(s) | 544, 2763, 3968 |
| GluI | GCNGC | 4 cut(s) | 142, 195, 1963, 2161 |
| GsaI | CCCAGC | 1 cut(s) | 1821 |
| GsuI | CTGGAG | 3 cut(s) | 580, 1754, 2709 |
| HapII | CCGG | 3 cut(s) | 333, 2970, 3083 |
| HgaI | GACGC | 2 cut(s) | 398, 466 |
| HhaI | GCGC | 3 cut(s) | 545, 2764, 3969 |
| Hin1I | GRCGYC | 1 cut(s) | 477 |
| Hin6I | GCGC | 3 cut(s) | 543, 2762, 3967 |
| HinP1I | GCGC | 3 cut(s) | 543, 2762, 3967 |
| HincII | GTYRAC | 2 cut(s) | 481, 3814 |
| HindII | GTYRAC | 2 cut(s) | 481, 3814 |
| HindIII | AAGCTT | 3 cut(s) | 225, 1898, 2342 |
| HpaII | CCGG | 3 cut(s) | 333, 2970, 3083 |
| HphI | GGTGA | 6 cut(s) | 227, 910, 1070, 2260, 3339, 3803 |
| Hpy166II | GTNNAC | 8 cut(s) | 20, 118, 481, 1340, 2525, 3163, 3814, 3946 |
| Hpy8I | GTNNAC | 8 cut(s) | 20, 118, 481, 1340, 2525, 3163, 3814, 3946 |
| Hpy99I | CGWCG | 1 cut(s) | 3369 |
| HpyAV | CCTTC | 5 cut(s) | 494, 836, 946, 962, 3360 |
| HpyCH4IV | ACGT | 8 cut(s) | 825, 2265, 2285, 2887, 3159, 3364, 3942, 4053 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 147, 194, 700, 2703, 2759, 3332 |
| HpySE526I | ACGT | 8 cut(s) | 825, 2265, 2285, 2887, 3159, 3364, 3942, 4053 |
| Hsp92I | GRCGYC | 1 cut(s) | 477 |
| HspAI | GCGC | 3 cut(s) | 543, 2762, 3967 |
| Kpn2I | TCCGGA | 1 cut(s) | 332 |
| LguI | GCTCTTC | 2 cut(s) | 767, 1230 |
| LmnI | GCTCC | 5 cut(s) | 426, 699, 1773, 2670, 3369 |
| Lsp1109I | GCAGC | 4 cut(s) | 153, 206, 1949, 2147 |
| MaeII | ACGT | 8 cut(s) | 825, 2265, 2285, 2887, 3159, 3364, 3942, 4053 |
| MfeI | CAATTG | 1 cut(s) | 2707 |
| MflI | RGATCY | 6 cut(s) | 81, 1411, 1783, 2059, 2149, 2500 |
| MhlI | GDGCHC | 1 cut(s) | 1974 |
| MlyI | GAGTC | 1 cut(s) | 3505 |
| MmeI | TCCRAC | 4 cut(s) | 558, 847, 2701, 3347 |
| Mph1103I | ATGCAT | 4 cut(s) | 930, 1155, 3018, 3997 |
| MroI | TCCGGA | 1 cut(s) | 332 |
| MroXI | GAANNNNTTC | 5 cut(s) | 1224, 1575, 2103, 2598, 3078 |
| MslI | CAYNNNNRTG | 6 cut(s) | 2220, 2309, 2643, 3021, 3257, 3990 |
| MspCI | CTTAAG | 1 cut(s) | 2339 |
| MspI | CCGG | 3 cut(s) | 333, 2970, 3083 |
| MspR9I | CCNGG | 4 cut(s) | 165, 423, 1191, 3908 |
| MssI | GTTTAAAC | 1 cut(s) | 507 |
| MunI | CAATTG | 1 cut(s) | 2707 |
| Mva1269I | GAATGC | 3 cut(s) | 2638, 2810, 2831 |
| MvaI | CCWGG | 4 cut(s) | 165, 423, 1191, 3908 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 147, 194, 700, 2703, 2759, 3332 |
| NcoI | CCATGG | 2 cut(s) | 1710, 2412 |
| NdeI | CATATG | 1 cut(s) | 152 |
| NlaIV | GGNNCC | 8 cut(s) | 428, 1363, 1595, 1822, 2000, 2227, 2921, 3371 |
| NmeAIII | GCCGAG | 2 cut(s) | 1909, 2047 |
| NmuCI | GTSAC | 7 cut(s) | 660, 898, 1400, 1636, 2266, 2302, 2984 |
| NsbI | TGCGCA | 3 cut(s) | 544, 2763, 3968 |
| NsiI | ATGCAT | 4 cut(s) | 930, 1155, 3018, 3997 |
| NspI | RCATGY | 8 cut(s) | 781, 866, 995, 1108, 1330, 2303, 2992, 3989 |
| NspV | TTCGAA | 1 cut(s) | 2130 |
| PagI | TCATGA | 1 cut(s) | 2215 |
| PciI | ACATGT | 4 cut(s) | 862, 1104, 2299, 2988 |
| PciSI | GCTCTTC | 2 cut(s) | 767, 1230 |
| PctI | GAATGC | 3 cut(s) | 2638, 2810, 2831 |
| PdmI | GAANNNNTTC | 5 cut(s) | 1224, 1575, 2103, 2598, 3078 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 866 |
| PfoI | TCCNGGA | 1 cut(s) | 1189 |
| PkrI | GCNGC | 4 cut(s) | 143, 196, 1964, 2162 |
| PleI | GAGTC | 1 cut(s) | 3504 |
| PmeI | GTTTAAAC | 1 cut(s) | 507 |
| PpsI | GAGTC | 1 cut(s) | 3504 |
| Ppu21I | YACGTR | 1 cut(s) | 826 |
| PpuMI | RGGWCCY | 1 cut(s) | 1821 |
| PscI | ACATGT | 4 cut(s) | 862, 1104, 2299, 2988 |
| PshBI | ATTAAT | 1 cut(s) | 1530 |
| Psp124BI | GAGCTC | 1 cut(s) | 1974 |
| Psp1406I | AACGTT | 1 cut(s) | 3942 |
| Psp5II | RGGWCCY | 1 cut(s) | 1821 |
| Psp6I | CCWGG | 4 cut(s) | 163, 421, 1189, 3906 |
| PspFI | CCCAGC | 1 cut(s) | 1817 |
| PspGI | CCWGG | 4 cut(s) | 163, 421, 1189, 3906 |
| PspN4I | GGNNCC | 8 cut(s) | 428, 1363, 1595, 1822, 2000, 2227, 2921, 3371 |
| PspPI | GGNCC | 4 cut(s) | 419, 1821, 2226, 3188 |
| PspPPI | RGGWCCY | 1 cut(s) | 1821 |
| PstI | CTGCAG | 1 cut(s) | 2790 |
| PsuI | RGATCY | 6 cut(s) | 81, 1411, 1783, 2059, 2149, 2500 |
| RsaI | GTAC | 5 cut(s) | 462, 1072, 1477, 1621, 3664 |
| RsaNI | GTAC | 5 cut(s) | 461, 1071, 1476, 1620, 3663 |
| RseI | CAYNNNNRTG | 6 cut(s) | 2220, 2309, 2643, 3021, 3257, 3990 |
| SacI | GAGCTC | 1 cut(s) | 1974 |
| SapI | GCTCTTC | 2 cut(s) | 767, 1230 |
| SatI | GCNGC | 4 cut(s) | 142, 195, 1963, 2161 |
| Sau96I | GGNCC | 4 cut(s) | 419, 1821, 2226, 3188 |
| ScaI | AGTACT | 1 cut(s) | 462 |
| SchI | GAGTC | 1 cut(s) | 3505 |
| ScrFI | CCNGG | 4 cut(s) | 165, 423, 1191, 3908 |
| SduI | GDGCHC | 1 cut(s) | 1974 |
| SfcI | CTRYAG | 5 cut(s) | 85, 975, 2786, 2959, 3459 |
| SfuI | TTCGAA | 1 cut(s) | 2130 |
| SinI | GGWCC | 4 cut(s) | 419, 1821, 2226, 3188 |
| SmiI | ATTTAAAT | 1 cut(s) | 2013 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 2220, 2309, 2643, 3021, 3257, 3990 |
| SmlI | CTYRAG | 5 cut(s) | 698, 1373, 2339, 2463, 2489 |
| SmoI | CTYRAG | 5 cut(s) | 698, 1373, 2339, 2463, 2489 |
| SpeI | ACTAGT | 2 cut(s) | 22, 463 |
| SsiI | CCGC | 3 cut(s) | 139, 818, 2551 |
| SspI | AATATT | 4 cut(s) | 614, 1450, 1777, 2662 |
| SstI | GAGCTC | 1 cut(s) | 1974 |
| StyD4I | CCNGG | 4 cut(s) | 163, 421, 1189, 3906 |
| StyI | CCWWGG | 5 cut(s) | 1468, 1589, 1710, 2182, 2412 |
| SwaI | ATTTAAAT | 1 cut(s) | 2013 |
| TaiI | ACGT | 8 cut(s) | 828, 2268, 2288, 2890, 3162, 3367, 3945, 4056 |
| TaqI | TCGA | 9 cut(s) | 249, 1216, 1461, 1569, 1878, 2130, 2592, 2799, 3011 |
| TaqII | GACCGA | 1 cut(s) | 2243 |
| TatI | WGTACW | 2 cut(s) | 460, 1475 |
| TscAI | CASTG | 6 cut(s) | 476, 1265, 2099, 2512, 3127, 3400 |
| TseFI | GTSAC | 7 cut(s) | 660, 898, 1400, 1636, 2266, 2302, 2984 |
| TseI | GCWGC | 4 cut(s) | 141, 194, 1962, 2160 |
| Tsp45I | GTSAC | 7 cut(s) | 660, 898, 1400, 1636, 2266, 2302, 2984 |
| TspGWI | ACGGA | 4 cut(s) | 552, 2011, 2390, 2825 |
| TspRI | CASTG | 6 cut(s) | 476, 1265, 2099, 2512, 3127, 3400 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 866 |
| Vha464I | CTTAAG | 1 cut(s) | 2339 |
| VpaK11BI | GGWCC | 4 cut(s) | 419, 1821, 2226, 3188 |
| VspI | ATTAAT | 1 cut(s) | 1530 |
| XapI | RAATTY | 5 cut(s) | 257, 1118, 1206, 1574, 2330 |
| XbaI | TCTAGA | 4 cut(s) | 446, 784, 1099, 2620 |
| XceI | RCATGY | 8 cut(s) | 781, 866, 995, 1108, 1330, 2303, 2992, 3989 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3750 |
| XmaJI | CCTAGG | 1 cut(s) | 2182 |
| XmiI | GTMKAC | 1 cut(s) | 3162 |
| XmnI | GAANNNNTTC | 5 cut(s) | 1224, 1575, 2103, 2598, 3078 |
| ZrmI | AGTACT | 1 cut(s) | 462 |
| Zsp2I | ATGCAT | 4 cut(s) | 930, 1155, 3018, 3997 |