AT2G18530

MAP kinase kinase kinase activity

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
8039670 .. 8040780
1111 bp
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UTR
Exon/CDS
Intron
AT2G18530.1

Sequence Viewer

Length: 642 bp
ATGTCTTTTACAAATAATTGTGTCTATTTAAACGTTCATGTCTTTTTAATTCTATATATAGATGTTTATATGTATTACAACACGTTACAAGAGTACTGTTCAGGAAGAAACCTAGCGAAACACATTGAAAGAAACGGAGGAAAATTACCGAAAGATGATGTGAGGAGTTTCGCTAATGAGATATTGCTTGGTCTCAAGTATATTCATGAAGAGAAGATCATTCATTGTGACATCAAACCAAAGAATATCTCACTTGTGTATGAGAATAACCGATTTGGTAGTGTTGGTGGGTTTTCTGCTAAGATCGCTGGTTTTGGAAAAGAGATAAAGAAATGGTCAGTTGAGTATGGTGAAGGATTAGGTCACATGAGAGAGGTTATGATGGGCATGGTTTTGGATTATGGTGCTGATGTGTGGGCTTTTGGCTGTACCGTGCTTGAGATGTTGACAGGAGAACGAGTTTGGAGTGAGTTTGGCAAAGGATTTCTCACAAAGTGTTTGGAGAGAGACCCTGCTAAGAGGTGGTGTGTTGATTGTTTGCTCAAACATGGGTTCCTTAAATGGATTGACGAAGAGGAGGAAGAAGATGACTTTTATGATGAAATAGGAGATGTGGAGGTAGAATATGAAGCAAATCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

213

Amino Acids

24.66

Weight (kDa)

4.99

Isoelectric Point (pI)

41.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 14 - 156 3.4e-21 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 29 - 158 8.2e-12 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0020182)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G18530 AT3G45670 AT3G45790 AT3G46140 AT3G46160 AT4G04632

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclI AACGTT 1 cut(s) 33
AdeI CACNNNGTG 1 cut(s) 495
AfaI GTAC 2 cut(s) 95, 430
AflIII ACRYGT 1 cut(s) 81
AgsI TTSAA 1 cut(s) 128
Alw26I GTCTC 2 cut(s) 197, 501
AsuHPI GGTGA 1 cut(s) 362
BccI CCATC 1 cut(s) 376
BcoDI GTCTC 2 cut(s) 197, 501
BfaI CTAG 1 cut(s) 113
BmcAI AGTACT 1 cut(s) 95
BmiI GGNNCC 1 cut(s) 554
BpuEI CTTGAG 2 cut(s) 179, 458
BsaI GGTCTC 2 cut(s) 197, 501
BsaXI ACNNNNNCTCC 2 cut(s) 444, 474
BseRI GAGGAG 2 cut(s) 178, 590
BsmAI GTCTC 2 cut(s) 197, 501
Bso31I GGTCTC 2 cut(s) 197, 501
Bsp143I GATC 2 cut(s) 216, 303
BspHI TCATGA 1 cut(s) 205
BspLI GGNNCC 1 cut(s) 554
BspTNI GGTCTC 2 cut(s) 197, 501
BssMI GATC 2 cut(s) 216, 303
Bst4CI ACNGT 2 cut(s) 98, 433
Bst6I CTCTTC 2 cut(s) 204, 567
BstDEI CTNAG 2 cut(s) 300, 516
BstKTI GATC 2 cut(s) 219, 306
BstMAI GTCTC 2 cut(s) 197, 501
BstMBI GATC 2 cut(s) 216, 303
BstMWI GCNNNNNNNGC 1 cut(s) 305
CciI TCATGA 1 cut(s) 205
Csp6I GTAC 2 cut(s) 94, 429
CviAII CATG 5 cut(s) 38, 206, 367, 388, 548
CviJI RGCY 2 cut(s) 419, 426
CviKI_1 RGCY 2 cut(s) 419, 426
CviQI GTAC 2 cut(s) 94, 429
DdeI CTNAG 2 cut(s) 300, 516
DpnI GATC 2 cut(s) 218, 305
DpnII GATC 2 cut(s) 216, 303
DraI TTTAAA 1 cut(s) 30
DraIII CACNNNGTG 1 cut(s) 495
Eam1104I CTCTTC 2 cut(s) 204, 567
EarI CTCTTC 2 cut(s) 204, 567
Eco31I GGTCTC 2 cut(s) 197, 501
FaeI CATG 5 cut(s) 41, 209, 370, 391, 551
FatI CATG 5 cut(s) 37, 205, 366, 387, 547
FspBI CTAG 1 cut(s) 113
Hin1II CATG 5 cut(s) 41, 209, 370, 391, 551
HincII GTYRAC 1 cut(s) 447
HindII GTYRAC 1 cut(s) 447
HphI GGTGA 1 cut(s) 362
Hpy166II GTNNAC 1 cut(s) 447
Hpy188III TCNNGA 2 cut(s) 102, 206
Hpy8I GTNNAC 1 cut(s) 447
HpyAV CCTTC 1 cut(s) 347
HpyCH4III ACNGT 2 cut(s) 98, 433
HpyCH4IV ACGT 2 cut(s) 33, 83
HpyF10VI GCNNNNNNNGC 1 cut(s) 305
HpyF3I CTNAG 2 cut(s) 300, 516
HpySE526I ACGT 2 cut(s) 33, 83
Hsp92II CATG 5 cut(s) 41, 209, 370, 391, 551
Kzo9I GATC 2 cut(s) 216, 303
LpnPI CCDG 4 cut(s) 87, 294, 435, 525
MaeI CTAG 1 cut(s) 113
MaeII ACGT 2 cut(s) 33, 83
MaeIII GTNAC 3 cut(s) 84, 227, 362
MalI GATC 2 cut(s) 218, 305
MboI GATC 2 cut(s) 216, 303
MboII GAAGA 6 cut(s) 117, 221, 226, 584, 593, 596
MluCI AATT 3 cut(s) 16, 48, 143
MnlI CCTC 7 cut(s) 131, 156, 367, 513, 568, 571, 610
MseI TTAA 3 cut(s) 29, 47, 558
MwoI GCNNNNNNNGC 1 cut(s) 305
NdeII GATC 2 cut(s) 216, 303
NlaIII CATG 5 cut(s) 41, 209, 370, 391, 551
NlaIV GGNNCC 1 cut(s) 554
NmuCI GTSAC 2 cut(s) 227, 362
PagI TCATGA 1 cut(s) 205
Psp1406I AACGTT 1 cut(s) 33
PspN4I GGNNCC 1 cut(s) 554
RsaI GTAC 2 cut(s) 95, 430
RsaNI GTAC 2 cut(s) 94, 429
SaqAI TTAA 3 cut(s) 29, 47, 558
Sau3AI GATC 2 cut(s) 216, 303
ScaI AGTACT 1 cut(s) 95
SetI ASST 7 cut(s) 36, 86, 114, 364, 378, 524, 621
SmlI CTYRAG 2 cut(s) 194, 437
SmoI CTYRAG 2 cut(s) 194, 437
Sse9I AATT 3 cut(s) 16, 48, 143
SspMI CTAG 1 cut(s) 113
TaaI ACNGT 2 cut(s) 98, 433
TaiI ACGT 2 cut(s) 36, 86
TasI AATT 3 cut(s) 16, 48, 143
TatI WGTACW 1 cut(s) 93
Tru1I TTAA 3 cut(s) 29, 47, 558
Tru9I TTAA 3 cut(s) 29, 47, 558
TseFI GTSAC 2 cut(s) 227, 362
Tsp45I GTSAC 2 cut(s) 227, 362
TspDTI ATGAA 6 cut(s) 26, 194, 212, 222, 615, 642
TspGWI ACGGA 1 cut(s) 150
XspI CTAG 1 cut(s) 113
ZrmI AGTACT 1 cut(s) 95
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.