AT3G45790
ERF Family

belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0020182
Physical Location & Seq
Reverse (-)
16825005 .. 16826222
1218 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G45790.1

Sequence Viewer

Length: 1131 bp
ATGGAGATGATAGAGACAGAGATTTCGTTGTCTGGTTACCACAAAAGATATGGTCATCTCAAATTCATCGAGTTATCAGACCCTCCTCTCACAAAAAGACCTAGATATTCACCCTCGGTGATCCCTCCTCTTCCTGATCAAAACCCTATTTTCACTCTTAAACTATCTCCGATCCTTCTGAAGAACAATAAAAGGAAGAGATTTACACCGAAGAGTAGTAGTAGTCTCAGTGTTGAAGAGATAACCAAACAAGTATTCGACGGAGTAGTCAGAAAGTCTTCATCTTGGATCAAGTCTGAGTTCCTTGGAAGAGGCTCTTACGGTTCGGTTTATCTGGCGACAAGTAAGAAGGCCAAAACTAAAACGACCATGGCGATCAAATCTGCAGAGATTTCACGAGCTTCGAGTCTAATGGACGAGGAAAGAATATTAACCCGTCTCTCATCTCCTTTCATCGTTCGTTGCTATGGCCACGAGATTGCACGCGAGGAGACTCTGTTCGGTGGCGAGAGAACGAATTACAATTTGATTCTCGAGTATTGCTCTGGCAAAAGCCTCTTCGACTTGGTCAACAGTAACCTTGGAGGATTGTCAGAGAAAGATGTGAAACTTCTTGCTAGAGATATCCTTTACGGTCTCGACTACATCCACAGGGCAAACATTATTCATTGTGACATCAAACCGGAAAATATCTTACTAGCCCCTGTCGAGAACCGGATAAGACCTAATGGGTACGTGGCAAAGATTGGGGATTTCGGTTTAGCATTGGAGAAGGGTTCAAGCGAGTATGAAAAAGCATCAGGTCATAGGAGAGGCACAACGCGATACATGTCTCCGGAGCTTATACGACATGGGATTGTTGATTACGCTGTTGACACGTGGGCTTTCGGATGCACAGTTTTGGAAATGTTAACGGGACAACAAGTATGGGGAGAACATAGTGATCTCGGTTCTGTAGATTGGGACATTCTCATCGGTCAAAGCTGTTACATTCCTTATATACCGGATTGGTTATCTGAAGAAGCACAGCATTTTCTCAGCAGATGTTTAAAAAGGGACCCTGCTTCAAGTTGTAAGATGAAGTATCCAACTCTCTATTTGGTATGTGTTTCTGGAAGTTTTGGTAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

376

Amino Acids

42.41

Weight (kDa)

8.82

Isoelectric Point (pI)

49.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 98 - 356 2.5e-50 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 100 - 360 2.2e-34 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0020182)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G18530 AT3G45670 AT3G45790 AT3G46140 AT3G46160 AT4G04632

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 266
AccII CGCG 2 cut(s) 486, 823
AccIII TCCGGA 1 cut(s) 835
AclWI GGATC 3 cut(s) 115, 166, 296
AcoI YGGCCR 1 cut(s) 469
AcsI RAATTY 1 cut(s) 62
AcuI CTGAAG 2 cut(s) 200, 1038
AcvI CACGTG 1 cut(s) 879
AfaI GTAC 1 cut(s) 734
AflIII ACRYGT 2 cut(s) 828, 876
AgsI TTSAA 3 cut(s) 236, 780, 1068
AjuI GAANNNNNNNTTGG 2 cut(s) 239, 271
AloI GAACNNNNNNTCC 2 cut(s) 482, 514
AluBI AGCT 3 cut(s) 401, 841, 984
AluI AGCT 3 cut(s) 401, 841, 984
Alw26I GTCTC 6 cut(s) 8, 230, 443, 485, 641, 837
AlwI GGATC 3 cut(s) 115, 166, 296
Ama87I CYCGRG 1 cut(s) 533
Aor13HI TCCGGA 1 cut(s) 835
AoxI GGCC 2 cut(s) 351, 469
ApoI RAATTY 1 cut(s) 62
ArsI GACNNNNNNTTYG 2 cut(s) 7, 39
Asp700I GAANNNNTTC 1 cut(s) 277
AspS9I GGNCC 1 cut(s) 1057
AsuHPI GGTGA 2 cut(s) 102, 130
AvaI CYCGRG 1 cut(s) 533
AvaII GGWCC 1 cut(s) 1057
BalI TGGCCA 1 cut(s) 471
BauI CACGAG 2 cut(s) 396, 473
BbrPI CACGTG 1 cut(s) 879
BbsI GAAGAC 1 cut(s) 270
BciVI GTATCC 1 cut(s) 1095
BclI TGATCA 1 cut(s) 136
BcoDI GTCTC 6 cut(s) 8, 230, 443, 485, 641, 837
BfaI CTAG 3 cut(s) 102, 618, 698
BfmI CTRYAG 2 cut(s) 384, 954
BfuI GTATCC 1 cut(s) 1095
Bme18I GGWCC 1 cut(s) 1057
BmeT110I CYCGRG 1 cut(s) 533
BmgT120I GGNCC 1 cut(s) 1057
BmiI GGNNCC 2 cut(s) 1058, 1059
BmsI GCATC 2 cut(s) 806, 881
BpiI GAAGAC 1 cut(s) 270
BplI GAGNNNNNCTC 2 cut(s) 527, 559
BsaAI YACGTR 2 cut(s) 736, 879
BsaI GGTCTC 1 cut(s) 641
BsaJI CCNNGG 4 cut(s) 114, 304, 369, 580
BsaWI WCCGGW 4 cut(s) 682, 714, 835, 1003
BsaXI ACNNNNNCTCC 2 cut(s) 482, 512
BseAI TCCGGA 1 cut(s) 835
BseDI CCNNGG 4 cut(s) 114, 304, 369, 580
BseGI GGATG 2 cut(s) 645, 896
BseMII CTCAG 3 cut(s) 241, 288, 1051
BseRI GAGGAG 3 cut(s) 75, 117, 503
Bsh1236I CGCG 2 cut(s) 486, 823
BshFI GGCC 2 cut(s) 353, 471
BsiHKCI CYCGRG 1 cut(s) 533
BsiSI CCGG 4 cut(s) 683, 715, 836, 1004
BslFI GGGAC 3 cut(s) 930, 977, 1070
BsmAI GTCTC 6 cut(s) 8, 230, 443, 485, 641, 837
BsmBI CGTCTC 1 cut(s) 443
BsmFI GGGAC 3 cut(s) 930, 977, 1070
BsnI GGCC 2 cut(s) 353, 471
Bso31I GGTCTC 1 cut(s) 641
BsoBI CYCGRG 1 cut(s) 533
Bsp13I TCCGGA 1 cut(s) 835
Bsp143I GATC 6 cut(s) 120, 136, 171, 288, 375, 943
Bsp19I CCATGG 1 cut(s) 369
BspANI GGCC 2 cut(s) 353, 471
BspCNI CTCAG 3 cut(s) 240, 289, 1050
BspEI TCCGGA 1 cut(s) 835
BspFNI CGCG 2 cut(s) 486, 823
BspLI GGNNCC 2 cut(s) 1058, 1059
BspMAI CTGCAG 1 cut(s) 388
BspPI GGATC 3 cut(s) 115, 166, 296
BspTNI GGTCTC 1 cut(s) 641
BssECI CCNNGG 4 cut(s) 114, 304, 369, 580
BssMI GATC 6 cut(s) 120, 136, 171, 288, 375, 943
BssSI CACGAG 2 cut(s) 396, 473
BssT1I CCWWGG 3 cut(s) 304, 369, 580
Bst2BI CACGAG 2 cut(s) 396, 473
Bst4CI ACNGT 4 cut(s) 323, 575, 635, 898
Bst6I CTCTTC 6 cut(s) 135, 191, 206, 231, 304, 563
BstBAI YACGTR 2 cut(s) 736, 879
BstC8I GCNNGC 1 cut(s) 484
BstDEI CTNAG 3 cut(s) 227, 297, 1037
BstDSI CCRYGG 1 cut(s) 369
BstEII GGTNACC 1 cut(s) 35
BstF5I GGATG 2 cut(s) 645, 896
BstFNI CGCG 2 cut(s) 486, 823
BstKTI GATC 6 cut(s) 123, 139, 174, 291, 378, 946
BstMAI GTCTC 6 cut(s) 8, 230, 443, 485, 641, 837
BstMBI GATC 6 cut(s) 120, 136, 171, 288, 375, 943
BstNSI RCATGY 1 cut(s) 832
BstPI GGTNACC 1 cut(s) 35
BstSFI CTRYAG 2 cut(s) 384, 954
BstUI CGCG 2 cut(s) 486, 823
BstV2I GAAGAC 1 cut(s) 270
BsuI GTATCC 1 cut(s) 1095
BsuRI GGCC 2 cut(s) 353, 471
BtgI CCRYGG 1 cut(s) 369
BtsCI GGATG 2 cut(s) 645, 896
BtsIMutI CAGTG 1 cut(s) 235
Cac8I GCNNGC 1 cut(s) 484
Cfr13I GGNCC 1 cut(s) 1057
Csp6I GTAC 1 cut(s) 733
CviAII CATG 3 cut(s) 370, 829, 851
CviJI RGCY 9 cut(s) 315, 353, 401, 471, 555, 701, 841, 884, 984
CviKI_1 RGCY 9 cut(s) 315, 353, 401, 471, 555, 701, 841, 884, 984
CviQI GTAC 1 cut(s) 733
DdeI CTNAG 3 cut(s) 227, 297, 1037
DpnI GATC 6 cut(s) 122, 138, 173, 290, 377, 945
DpnII GATC 6 cut(s) 120, 136, 171, 288, 375, 943
DraI TTTAAA 1 cut(s) 1050
DrdI GACNNNNNNGTC 1 cut(s) 266
DseDI GACNNNNNNGTC 1 cut(s) 266
EaeI YGGCCR 1 cut(s) 469
Eam1104I CTCTTC 6 cut(s) 135, 191, 206, 231, 304, 563
EarI CTCTTC 6 cut(s) 135, 191, 206, 231, 304, 563
Eco130I CCWWGG 3 cut(s) 304, 369, 580
Eco31I GGTCTC 1 cut(s) 641
Eco32I GATATC 1 cut(s) 625
Eco47I GGWCC 1 cut(s) 1057
Eco57I CTGAAG 2 cut(s) 200, 1038
Eco72I CACGTG 1 cut(s) 879
Eco88I CYCGRG 1 cut(s) 533
Eco91I GGTNACC 1 cut(s) 35
EcoO109I RGGNCCY 1 cut(s) 1057
EcoO65I GGTNACC 1 cut(s) 35
EcoRV GATATC 1 cut(s) 625
EcoT14I CCWWGG 3 cut(s) 304, 369, 580
ErhI CCWWGG 3 cut(s) 304, 369, 580
Esp3I CGTCTC 1 cut(s) 443
FaeI CATG 3 cut(s) 373, 832, 854
FalI AAGNNNNNCTT 2 cut(s) 301, 333
FaqI GGGAC 3 cut(s) 930, 977, 1070
FatI CATG 3 cut(s) 369, 828, 850
FbaI TGATCA 1 cut(s) 136
FokI GGATG 2 cut(s) 632, 903
FspBI CTAG 3 cut(s) 102, 618, 698
HaeIII GGCC 2 cut(s) 353, 471
HapII CCGG 4 cut(s) 683, 715, 836, 1004
Hin1II CATG 3 cut(s) 373, 832, 854
HincII GTYRAC 3 cut(s) 571, 874, 912
HindII GTYRAC 3 cut(s) 571, 874, 912
HinfI GANTC 3 cut(s) 406, 493, 529
HpaI GTTAAC 1 cut(s) 912
HpaII CCGG 4 cut(s) 683, 715, 836, 1004
HphI GGTGA 2 cut(s) 102, 130
Hpy166II GTNNAC 3 cut(s) 571, 874, 912
Hpy188I TCNGA 8 cut(s) 79, 171, 180, 272, 298, 595, 890, 1018
Hpy188III TCNNGA 7 cut(s) 134, 396, 533, 638, 709, 836, 1113
Hpy8I GTNNAC 3 cut(s) 571, 874, 912
Hpy99I CGWCG 1 cut(s) 263
HpyAV CCTTC 3 cut(s) 185, 343, 766
HpyCH4III ACNGT 4 cut(s) 323, 575, 635, 898
HpyCH4IV ACGT 2 cut(s) 735, 878
HpyCH4V TGCA 3 cut(s) 386, 482, 894
HpyF3I CTNAG 3 cut(s) 227, 297, 1037
HpySE526I ACGT 2 cut(s) 735, 878
Hsp92II CATG 3 cut(s) 373, 832, 854
KflI GGGWCCC 1 cut(s) 1057
Kpn2I TCCGGA 1 cut(s) 835
Ksp22I TGATCA 1 cut(s) 136
KspAI GTTAAC 1 cut(s) 912
Kzo9I GATC 6 cut(s) 120, 136, 171, 288, 375, 943
LmnI GCTCC 1 cut(s) 838
LweI GCATC 2 cut(s) 806, 881
MaeI CTAG 3 cut(s) 102, 618, 698
MaeII ACGT 2 cut(s) 735, 878
MaeIII GTNAC 4 cut(s) 35, 575, 671, 986
MalI GATC 6 cut(s) 122, 138, 173, 290, 377, 945
MboI GATC 6 cut(s) 120, 136, 171, 288, 375, 943
MboII GAAGA 9 cut(s) 122, 193, 208, 223, 248, 270, 321, 550, 1031
MlsI TGGCCA 1 cut(s) 471
MluCI AATT 3 cut(s) 62, 517, 523
MluNI TGGCCA 1 cut(s) 471
MlyI GAGTC 2 cut(s) 415, 487
MmeI TCCRAC 1 cut(s) 1112
Mox20I TGGCCA 1 cut(s) 471
MroI TCCGGA 1 cut(s) 835
MroXI GAANNNNTTC 1 cut(s) 277
MscI TGGCCA 1 cut(s) 471
MseI TTAA 4 cut(s) 159, 431, 911, 1049
Msp20I TGGCCA 1 cut(s) 471
MspI CCGG 4 cut(s) 683, 715, 836, 1004
MvnI CGCG 2 cut(s) 486, 823
NcoI CCATGG 1 cut(s) 369
NdeII GATC 6 cut(s) 120, 136, 171, 288, 375, 943
NlaIII CATG 3 cut(s) 373, 832, 854
NlaIV GGNNCC 2 cut(s) 1058, 1059
NmuCI GTSAC 1 cut(s) 671
NspI RCATGY 1 cut(s) 832
PaeR7I CTCGAG 1 cut(s) 533
PciI ACATGT 1 cut(s) 828
PcsI WCGNNNNNNNCGW 1 cut(s) 371
PdmI GAANNNNTTC 1 cut(s) 277
PfeI GAWTC 1 cut(s) 529
PflFI GACNNNGTC 1 cut(s) 566
PleI GAGTC 2 cut(s) 414, 487
PmaCI CACGTG 1 cut(s) 879
PmlI CACGTG 1 cut(s) 879
PpsI GAGTC 2 cut(s) 414, 487
Ppu21I YACGTR 2 cut(s) 736, 879
PpuMI RGGWCCY 1 cut(s) 1057
PscI ACATGT 1 cut(s) 828
Psp5II RGGWCCY 1 cut(s) 1057
PspCI CACGTG 1 cut(s) 879
PspEI GGTNACC 1 cut(s) 35
PspN4I GGNNCC 2 cut(s) 1058, 1059
PspPI GGNCC 1 cut(s) 1057
PspPPI RGGWCCY 1 cut(s) 1057
PstI CTGCAG 1 cut(s) 388
PsyI GACNNNGTC 1 cut(s) 566
RsaI GTAC 1 cut(s) 734
RsaNI GTAC 1 cut(s) 733
SaqAI TTAA 4 cut(s) 159, 431, 911, 1049
Sau3AI GATC 6 cut(s) 120, 136, 171, 288, 375, 943
Sau96I GGNCC 1 cut(s) 1057
SchI GAGTC 2 cut(s) 415, 487
SetI ASST 9 cut(s) 103, 403, 582, 727, 738, 805, 843, 881, 986
SfaNI GCATC 2 cut(s) 806, 881
SfcI CTRYAG 2 cut(s) 384, 954
Sfr274I CTCGAG 1 cut(s) 533
SinI GGWCC 1 cut(s) 1057
SlaI CTCGAG 1 cut(s) 533
SmlI CTYRAG 1 cut(s) 533
SmoI CTYRAG 1 cut(s) 533
Sse9I AATT 3 cut(s) 62, 517, 523
SspI AATATT 1 cut(s) 429
SspMI CTAG 3 cut(s) 102, 618, 698
StyI CCWWGG 3 cut(s) 304, 369, 580
TaaI ACNGT 4 cut(s) 323, 575, 635, 898
TaiI ACGT 2 cut(s) 738, 881
TaqI TCGA 7 cut(s) 69, 258, 404, 534, 561, 639, 708
TaqII GACCGA 1 cut(s) 965
TasI AATT 3 cut(s) 62, 517, 523
TfiI GAWTC 1 cut(s) 529
Tru1I TTAA 4 cut(s) 159, 431, 911, 1049
Tru9I TTAA 4 cut(s) 159, 431, 911, 1049
TscAI CASTG 1 cut(s) 235
TseFI GTSAC 1 cut(s) 671
Tsp45I GTSAC 1 cut(s) 671
TspDTI ATGAA 6 cut(s) 55, 270, 442, 656, 804, 1094
TspGWI ACGGA 1 cut(s) 276
TspRI CASTG 1 cut(s) 235
Tth111I GACNNNGTC 1 cut(s) 566
VpaK11BI GGWCC 1 cut(s) 1057
XapI RAATTY 1 cut(s) 62
XceI RCATGY 1 cut(s) 832
XcmI CCANNNNNNNNNTGG 1 cut(s) 47
XhoI CTCGAG 1 cut(s) 533
XmnI GAANNNNTTC 1 cut(s) 277
XspI CTAG 3 cut(s) 102, 618, 698
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.