AT3G46140
ERF Family

belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0020182
Physical Location & Seq
Forward (+)
16948090 .. 16949220
1131 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G46140.1

Sequence Viewer

Length: 1131 bp
ATGGAGATGATAGAGACAGAGATTTCGTTTTCTGGTTACCTCAAAAGATATGGTCATCTCAAATTCATCGAGTTATCAGACCCTCCTCTCACAAAAAGACCTAGATATTCACCCTCGGTGATCCCTCCTCTTCCTGATCAAAACCCTATTTTCACTCTTAAACTATCTCCGATCATTCTGAAGAACAATAAAAGGAAGAGATTTACACCGAAGAGTAGTAGTAGTCGCAGTGTTGAAGAGATAACCAAACAAGTATTCGACGGAGTAGTCAGAAAGTCTTCATCTTGGATCAAGTCTGAGTTCCTTGGAAGAGGCTCTTACGGTTCGGTTTATCTGGCGACAAGTAAGAAGGCCAAAACTAAAACGACCATGGCGATCAAATCTGCAGAGATTTCACGAGCTTCGAGTCTAATGGACGAGGAAAGAATATTAACCCGTCTCTCATCTCCTTTCATTGTTCGTTGCTATGGCCACGAGATTGCACGTGAGGAGACTCTGTTCGGTGGCGAGAGAACGAATTACAATTTGATTCTCGAGTATTGCTCTGGCAAAAGCCTCTTCGACTTGGTCAACGATAACCTTGGAGGATTGTCAGAGAAAGATGTGAAACTTCTTGCTAGAGATATCCTTTACGGTCTCGACTGCATCCACAGGGCAAACATTATTCATTGTGACATTAAACCGGAAAATATCTTCTTAACCCCTGTCGAGAACCGGATAAGACCTAGTGGGTATGTGGCAAAGATTGGGGATTTCGGTTTAGCATTGGAGAAGGGTTCAAGCGAGTATGAAAAAGCATCAGGTCATAGGAGAGGCACAACGCGATACATGTCTCCGGAGCTTATACGACATGGGATTGTTGATTACGCTGTTGACACGTGGGCTTTCGGATGCACAGTTTTGGAAATGTTAACGGGACAACAAGTATGGGGAGAACATAGTGATCTCGGTTCTGTAGATTGGGACATTCTCATCGGTCAAAGCTGTTACATTCCTTATATACCGGATTGGTTATCTGAAGAAGCACAGCATTTTCTCAGCAGATGTTTAAAAAGGGACCCTGCTTCAAGGTGGGGGATTGGTGCACTCTTGAACCACCCCTTTTTGCAATGTGGATCTATAATTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

376

Amino Acids

42.45

Weight (kDa)

8.64

Isoelectric Point (pI)

49.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 98 - 369 3.5e-53 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 100 - 363 7.3e-33 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0020182)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G18530 AT3G45670 AT3G45790 AT3G46140 AT3G46160 AT4G04632

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 266
AccII CGCG 1 cut(s) 823
AccIII TCCGGA 1 cut(s) 835
AclWI GGATC 3 cut(s) 115, 296, 1123
AcoI YGGCCR 1 cut(s) 469
AcsI RAATTY 1 cut(s) 62
AcuI CTGAAG 2 cut(s) 200, 1038
AcvI CACGTG 2 cut(s) 485, 879
AflIII ACRYGT 2 cut(s) 828, 876
AgsI TTSAA 4 cut(s) 236, 780, 1068, 1093
AjuI GAANNNNNNNTTGG 2 cut(s) 239, 271
AloI GAACNNNNNNTCC 2 cut(s) 482, 514
AluBI AGCT 3 cut(s) 401, 841, 984
AluI AGCT 3 cut(s) 401, 841, 984
Alw21I GWGCWC 1 cut(s) 1087
Alw26I GTCTC 5 cut(s) 8, 443, 485, 641, 837
Alw44I GTGCAC 1 cut(s) 1083
AlwI GGATC 3 cut(s) 115, 296, 1123
Ama87I CYCGRG 1 cut(s) 533
Aor13HI TCCGGA 1 cut(s) 835
AoxI GGCC 2 cut(s) 351, 469
ApaLI GTGCAC 1 cut(s) 1083
ApoI RAATTY 1 cut(s) 62
ArsI GACNNNNNNTTYG 2 cut(s) 7, 39
Asp700I GAANNNNTTC 1 cut(s) 277
AspS9I GGNCC 1 cut(s) 1057
AsuHPI GGTGA 2 cut(s) 102, 130
AvaI CYCGRG 1 cut(s) 533
AvaII GGWCC 1 cut(s) 1057
BaeGI GKGCMC 1 cut(s) 1087
BalI TGGCCA 1 cut(s) 471
BauI CACGAG 2 cut(s) 396, 473
BbrPI CACGTG 2 cut(s) 485, 879
BbsI GAAGAC 1 cut(s) 270
Bbv12I GWGCWC 1 cut(s) 1087
BclI TGATCA 1 cut(s) 136
BcoDI GTCTC 5 cut(s) 8, 443, 485, 641, 837
BfaI CTAG 3 cut(s) 102, 618, 726
BfmI CTRYAG 2 cut(s) 384, 954
Bme18I GGWCC 1 cut(s) 1057
BmeT110I CYCGRG 1 cut(s) 533
BmgT120I GGNCC 1 cut(s) 1057
BmiI GGNNCC 2 cut(s) 1058, 1059
BmsI GCATC 3 cut(s) 654, 806, 881
BpiI GAAGAC 1 cut(s) 270
BplI GAGNNNNNCTC 2 cut(s) 527, 559
BsaAI YACGTR 2 cut(s) 485, 879
BsaI GGTCTC 1 cut(s) 641
BsaJI CCNNGG 4 cut(s) 114, 304, 369, 580
BsaWI WCCGGW 4 cut(s) 682, 714, 835, 1003
BsaXI ACNNNNNCTCC 2 cut(s) 482, 512
Bse3DI GCAATG 1 cut(s) 1115
BseAI TCCGGA 1 cut(s) 835
BseDI CCNNGG 4 cut(s) 114, 304, 369, 580
BseGI GGATG 2 cut(s) 645, 896
BseMI GCAATG 1 cut(s) 1115
BseMII CTCAG 2 cut(s) 288, 1051
BseRI GAGGAG 3 cut(s) 75, 117, 503
BseSI GKGCMC 1 cut(s) 1087
Bsh1236I CGCG 1 cut(s) 823
BshFI GGCC 2 cut(s) 353, 471
BsiHKAI GWGCWC 1 cut(s) 1087
BsiHKCI CYCGRG 1 cut(s) 533
BsiSI CCGG 4 cut(s) 683, 715, 836, 1004
BslFI GGGAC 3 cut(s) 930, 977, 1070
BsmAI GTCTC 5 cut(s) 8, 443, 485, 641, 837
BsmBI CGTCTC 1 cut(s) 443
BsmFI GGGAC 3 cut(s) 930, 977, 1070
BsnI GGCC 2 cut(s) 353, 471
Bso31I GGTCTC 1 cut(s) 641
BsoBI CYCGRG 1 cut(s) 533
Bsp1286I GDGCHC 1 cut(s) 1087
Bsp13I TCCGGA 1 cut(s) 835
Bsp143I GATC 7 cut(s) 120, 136, 171, 288, 375, 943, 1115
Bsp19I CCATGG 1 cut(s) 369
BspANI GGCC 2 cut(s) 353, 471
BspCNI CTCAG 2 cut(s) 289, 1050
BspEI TCCGGA 1 cut(s) 835
BspFNI CGCG 1 cut(s) 823
BspLI GGNNCC 2 cut(s) 1058, 1059
BspMAI CTGCAG 1 cut(s) 388
BspPI GGATC 3 cut(s) 115, 296, 1123
BspTNI GGTCTC 1 cut(s) 641
BsrDI GCAATG 1 cut(s) 1115
BssECI CCNNGG 4 cut(s) 114, 304, 369, 580
BssMI GATC 7 cut(s) 120, 136, 171, 288, 375, 943, 1115
BssSI CACGAG 2 cut(s) 396, 473
BssT1I CCWWGG 3 cut(s) 304, 369, 580
Bst2BI CACGAG 2 cut(s) 396, 473
Bst4CI ACNGT 3 cut(s) 323, 635, 898
Bst6I CTCTTC 6 cut(s) 135, 191, 206, 231, 304, 563
BstBAI YACGTR 2 cut(s) 485, 879
BstDEI CTNAG 2 cut(s) 297, 1037
BstDSI CCRYGG 1 cut(s) 369
BstEII GGTNACC 1 cut(s) 35
BstF5I GGATG 2 cut(s) 645, 896
BstFNI CGCG 1 cut(s) 823
BstKTI GATC 7 cut(s) 123, 139, 174, 291, 378, 946, 1118
BstMAI GTCTC 5 cut(s) 8, 443, 485, 641, 837
BstMBI GATC 7 cut(s) 120, 136, 171, 288, 375, 943, 1115
BstNSI RCATGY 1 cut(s) 832
BstPI GGTNACC 1 cut(s) 35
BstSFI CTRYAG 2 cut(s) 384, 954
BstSLI GKGCMC 1 cut(s) 1087
BstUI CGCG 1 cut(s) 823
BstV2I GAAGAC 1 cut(s) 270
BstX2I RGATCY 1 cut(s) 1115
BstYI RGATCY 1 cut(s) 1115
BsuRI GGCC 2 cut(s) 353, 471
BtgI CCRYGG 1 cut(s) 369
BtsCI GGATG 2 cut(s) 645, 896
BtsI GCAGTG 1 cut(s) 235
BtsIMutI CAGTG 1 cut(s) 235
Cfr13I GGNCC 1 cut(s) 1057
CviAII CATG 3 cut(s) 370, 829, 851
CviJI RGCY 8 cut(s) 315, 353, 401, 471, 555, 841, 884, 984
CviKI_1 RGCY 8 cut(s) 315, 353, 401, 471, 555, 841, 884, 984
DdeI CTNAG 2 cut(s) 297, 1037
DpnI GATC 7 cut(s) 122, 138, 173, 290, 377, 945, 1117
DpnII GATC 7 cut(s) 120, 136, 171, 288, 375, 943, 1115
DraI TTTAAA 1 cut(s) 1050
DrdI GACNNNNNNGTC 1 cut(s) 266
DseDI GACNNNNNNGTC 1 cut(s) 266
EaeI YGGCCR 1 cut(s) 469
Eam1104I CTCTTC 6 cut(s) 135, 191, 206, 231, 304, 563
EarI CTCTTC 6 cut(s) 135, 191, 206, 231, 304, 563
Eco130I CCWWGG 3 cut(s) 304, 369, 580
Eco31I GGTCTC 1 cut(s) 641
Eco32I GATATC 1 cut(s) 625
Eco47I GGWCC 1 cut(s) 1057
Eco57I CTGAAG 2 cut(s) 200, 1038
Eco72I CACGTG 2 cut(s) 485, 879
Eco88I CYCGRG 1 cut(s) 533
Eco91I GGTNACC 1 cut(s) 35
EcoO109I RGGNCCY 1 cut(s) 1057
EcoO65I GGTNACC 1 cut(s) 35
EcoRV GATATC 1 cut(s) 625
EcoT14I CCWWGG 3 cut(s) 304, 369, 580
ErhI CCWWGG 3 cut(s) 304, 369, 580
Esp3I CGTCTC 1 cut(s) 443
FaeI CATG 3 cut(s) 373, 832, 854
FalI AAGNNNNNCTT 2 cut(s) 301, 333
FaqI GGGAC 3 cut(s) 930, 977, 1070
FatI CATG 3 cut(s) 369, 828, 850
FbaI TGATCA 1 cut(s) 136
FokI GGATG 2 cut(s) 632, 903
FspBI CTAG 3 cut(s) 102, 618, 726
HaeIII GGCC 2 cut(s) 353, 471
HapII CCGG 4 cut(s) 683, 715, 836, 1004
Hin1II CATG 3 cut(s) 373, 832, 854
HincII GTYRAC 3 cut(s) 571, 874, 912
HindII GTYRAC 3 cut(s) 571, 874, 912
HinfI GANTC 3 cut(s) 406, 493, 529
HpaI GTTAAC 1 cut(s) 912
HpaII CCGG 4 cut(s) 683, 715, 836, 1004
HphI GGTGA 2 cut(s) 102, 130
Hpy166II GTNNAC 4 cut(s) 571, 874, 912, 1085
Hpy188I TCNGA 8 cut(s) 79, 171, 180, 272, 298, 595, 890, 1018
Hpy188III TCNNGA 7 cut(s) 134, 396, 533, 638, 709, 836, 1090
Hpy8I GTNNAC 4 cut(s) 571, 874, 912, 1085
Hpy99I CGWCG 1 cut(s) 263
HpyAV CCTTC 2 cut(s) 343, 766
HpyCH4III ACNGT 3 cut(s) 323, 635, 898
HpyCH4IV ACGT 2 cut(s) 484, 878
HpyCH4V TGCA 6 cut(s) 386, 482, 645, 894, 1085, 1108
HpyF3I CTNAG 2 cut(s) 297, 1037
HpySE526I ACGT 2 cut(s) 484, 878
Hsp92II CATG 3 cut(s) 373, 832, 854
KflI GGGWCCC 1 cut(s) 1057
Kpn2I TCCGGA 1 cut(s) 835
Ksp22I TGATCA 1 cut(s) 136
KspAI GTTAAC 1 cut(s) 912
Kzo9I GATC 7 cut(s) 120, 136, 171, 288, 375, 943, 1115
LmnI GCTCC 1 cut(s) 838
LweI GCATC 3 cut(s) 654, 806, 881
MaeI CTAG 3 cut(s) 102, 618, 726
MaeII ACGT 2 cut(s) 484, 878
MaeIII GTNAC 3 cut(s) 35, 671, 986
MalI GATC 7 cut(s) 122, 138, 173, 290, 377, 945, 1117
MboI GATC 7 cut(s) 120, 136, 171, 288, 375, 943, 1115
MflI RGATCY 1 cut(s) 1115
MhlI GDGCHC 1 cut(s) 1087
MlsI TGGCCA 1 cut(s) 471
MluCI AATT 4 cut(s) 62, 517, 523, 1122
MluNI TGGCCA 1 cut(s) 471
MlyI GAGTC 2 cut(s) 415, 487
Mox20I TGGCCA 1 cut(s) 471
MroI TCCGGA 1 cut(s) 835
MroXI GAANNNNTTC 1 cut(s) 277
MscI TGGCCA 1 cut(s) 471
MseI TTAA 6 cut(s) 159, 431, 678, 698, 911, 1049
Msp20I TGGCCA 1 cut(s) 471
MspI CCGG 4 cut(s) 683, 715, 836, 1004
MvnI CGCG 1 cut(s) 823
NcoI CCATGG 1 cut(s) 369
NdeII GATC 7 cut(s) 120, 136, 171, 288, 375, 943, 1115
NlaIII CATG 3 cut(s) 373, 832, 854
NlaIV GGNNCC 2 cut(s) 1058, 1059
NmuCI GTSAC 1 cut(s) 671
NspI RCATGY 1 cut(s) 832
PaeR7I CTCGAG 1 cut(s) 533
PciI ACATGT 1 cut(s) 828
PcsI WCGNNNNNNNCGW 1 cut(s) 371
PdmI GAANNNNTTC 1 cut(s) 277
PfeI GAWTC 1 cut(s) 529
PflFI GACNNNGTC 1 cut(s) 566
PleI GAGTC 2 cut(s) 414, 487
PmaCI CACGTG 2 cut(s) 485, 879
PmlI CACGTG 2 cut(s) 485, 879
PpsI GAGTC 2 cut(s) 414, 487
Ppu21I YACGTR 2 cut(s) 485, 879
PpuMI RGGWCCY 1 cut(s) 1057
PscI ACATGT 1 cut(s) 828
Psp5II RGGWCCY 1 cut(s) 1057
PspCI CACGTG 2 cut(s) 485, 879
PspEI GGTNACC 1 cut(s) 35
PspN4I GGNNCC 2 cut(s) 1058, 1059
PspPI GGNCC 1 cut(s) 1057
PspPPI RGGWCCY 1 cut(s) 1057
PstI CTGCAG 1 cut(s) 388
PsuI RGATCY 1 cut(s) 1115
PsyI GACNNNGTC 1 cut(s) 566
SaqAI TTAA 6 cut(s) 159, 431, 678, 698, 911, 1049
Sau3AI GATC 7 cut(s) 120, 136, 171, 288, 375, 943, 1115
Sau96I GGNCC 1 cut(s) 1057
SchI GAGTC 2 cut(s) 415, 487
SduI GDGCHC 1 cut(s) 1087
SfaNI GCATC 3 cut(s) 654, 806, 881
SfcI CTRYAG 2 cut(s) 384, 954
Sfr274I CTCGAG 1 cut(s) 533
SinI GGWCC 1 cut(s) 1057
SlaI CTCGAG 1 cut(s) 533
SmlI CTYRAG 1 cut(s) 533
SmoI CTYRAG 1 cut(s) 533
Sse9I AATT 4 cut(s) 62, 517, 523, 1122
SspI AATATT 1 cut(s) 429
SspMI CTAG 3 cut(s) 102, 618, 726
StyI CCWWGG 3 cut(s) 304, 369, 580
TaaI ACNGT 3 cut(s) 323, 635, 898
TaiI ACGT 2 cut(s) 487, 881
TaqI TCGA 7 cut(s) 69, 258, 404, 534, 561, 639, 708
TaqII GACCGA 1 cut(s) 965
TasI AATT 4 cut(s) 62, 517, 523, 1122
TfiI GAWTC 1 cut(s) 529
Tru1I TTAA 6 cut(s) 159, 431, 678, 698, 911, 1049
Tru9I TTAA 6 cut(s) 159, 431, 678, 698, 911, 1049
TscAI CASTG 1 cut(s) 235
TseFI GTSAC 1 cut(s) 671
Tsp45I GTSAC 1 cut(s) 671
TspDTI ATGAA 5 cut(s) 55, 270, 442, 656, 804
TspGWI ACGGA 1 cut(s) 276
TspRI CASTG 1 cut(s) 235
Tth111I GACNNNGTC 1 cut(s) 566
VneI GTGCAC 1 cut(s) 1083
VpaK11BI GGWCC 1 cut(s) 1057
XapI RAATTY 1 cut(s) 62
XceI RCATGY 1 cut(s) 832
XhoI CTCGAG 1 cut(s) 533
XmnI GAANNNNTTC 1 cut(s) 277
XspI CTAG 3 cut(s) 102, 618, 726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.