26S proteasome regulatory subunit 4 homolog
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G20140 AT4G29040 |
| fragaria_vesca | FvH4_2g19750 FvH4_3g38770 |
| malus_domestica | MD05G1182100.v1.1 MD10G1170400.v1.1 |
| prunus_persica | Prupe.8G208900_v2.0.a1 |
| pyrus_communis | pycom05g16750 |
| rosa_chinensis | RchiOBHm_Chr5g0069941 RchiOBHm_Chr6g0285461 |
| rosa_laevigata | RLG00000012638 RLG00000036109 |
| rosa_multiflora | Rmu_sc0000284.1_g000014 Rmu_sc0002367.1_g000014 Rmu_sc0007704.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00011130 Rroxscaffold_7G00183130 |
| rosa_rugosa | Rorug05G0400800 Rorug05G0400900 Rorug06G0174800 |
| rosa_samantha | Rh5AG458100 Rh5BG476800 Rh5CG500600 Rh5DG488700 Rh6AG286200 Rh6BG287400 Rh6CG288500 Rh6DG281300 |
| rosa_wichuraiana | Rw5G042760 Rw6G024580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 106 |
| Acc36I | ACCTGC | 1 cut(s) | 106 |
| AccB1I | GGYRCC | 1 cut(s) | 881 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 56, 698 |
| AccII | CGCG | 1 cut(s) | 998 |
| AciI | CCGC | 5 cut(s) | 21, 90, 143, 146, 889 |
| AclWI | GGATC | 5 cut(s) | 441, 506, 519, 1016, 1055 |
| AcsI | RAATTY | 2 cut(s) | 730, 1064 |
| AcuI | CTGAAG | 3 cut(s) | 159, 723, 1155 |
| AfaI | GTAC | 3 cut(s) | 322, 401, 477 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 20, 56, 668, 698 |
| AflIII | ACRYGT | 1 cut(s) | 1326 |
| AgsI | TTSAA | 8 cut(s) | 28, 265, 347, 443, 500, 972, 1267, 1294 |
| AjnI | CCWGG | 3 cut(s) | 445, 691, 1039 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 533, 565 |
| AloI | GAACNNNNNNTCC | 6 cut(s) | 62, 94, 224, 256, 906, 938 |
| AlwI | GGATC | 5 cut(s) | 441, 506, 519, 1016, 1055 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 698, 1187, 1214 |
| Ama87I | CYCGRG | 1 cut(s) | 632 |
| AoxI | GGCC | 1 cut(s) | 1042 |
| ApeKI | GCWGC | 1 cut(s) | 450 |
| ApoI | RAATTY | 2 cut(s) | 730, 1064 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 77, 774, 1308 |
| AspS9I | GGNCC | 4 cut(s) | 11, 134, 392, 797 |
| AsuC2I | CCSGG | 1 cut(s) | 1025 |
| AsuHPI | GGTGA | 2 cut(s) | 175, 698 |
| AsuII | TTCGAA | 1 cut(s) | 81 |
| AvaI | CYCGRG | 1 cut(s) | 632 |
| AvaII | GGWCC | 4 cut(s) | 11, 134, 392, 797 |
| AxyI | CCTNAGG | 1 cut(s) | 270 |
| BamHI | GGATCC | 1 cut(s) | 511 |
| BanI | GGYRCC | 1 cut(s) | 881 |
| BauI | CACGAG | 1 cut(s) | 102 |
| BbsI | GAAGAC | 2 cut(s) | 710, 1099 |
| BbvCI | CCTCAGC | 1 cut(s) | 285 |
| BbvI | GCAGC | 1 cut(s) | 437 |
| BccI | CCATC | 3 cut(s) | 47, 788, 953 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 23, 57, 854, 888 |
| BciT130I | CCWGG | 3 cut(s) | 447, 693, 1041 |
| BcnI | CCSGG | 1 cut(s) | 1025 |
| BfuAI | ACCTGC | 1 cut(s) | 106 |
| BglII | AGATCT | 1 cut(s) | 296 |
| BisI | GCNGC | 4 cut(s) | 90, 144, 147, 451 |
| BlsI | GCNGC | 4 cut(s) | 91, 145, 148, 452 |
| BmcAI | AGTACT | 1 cut(s) | 401 |
| Bme1390I | CCNGG | 4 cut(s) | 447, 693, 1025, 1041 |
| Bme18I | GGWCC | 4 cut(s) | 11, 134, 392, 797 |
| BmeT110I | CYCGRG | 1 cut(s) | 632 |
| BmgT120I | GGNCC | 4 cut(s) | 11, 134, 392, 797 |
| BmiI | GGNNCC | 4 cut(s) | 513, 546, 799, 883 |
| BmrFI | CCNGG | 4 cut(s) | 447, 693, 1025, 1041 |
| BmrI | ACTGGG | 1 cut(s) | 708 |
| BmsI | GCATC | 2 cut(s) | 453, 862 |
| BmuI | ACTGGG | 1 cut(s) | 708 |
| BpiI | GAAGAC | 2 cut(s) | 710, 1099 |
| Bpu10I | CCTNAGC | 2 cut(s) | 285, 717 |
| Bpu14I | TTCGAA | 1 cut(s) | 81 |
| BpuMI | CCSGG | 1 cut(s) | 1025 |
| BsaBI | GATNNNNATC | 2 cut(s) | 363, 432 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 62, 92, 151, 181, 224, 254 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 20, 56, 668, 698 |
| Bse1I | ACTGG | 1 cut(s) | 703 |
| Bse21I | CCTNAGG | 1 cut(s) | 270 |
| Bse3DI | GCAATG | 1 cut(s) | 707 |
| Bse8I | GATNNNNATC | 2 cut(s) | 363, 432 |
| BseBI | CCWGG | 3 cut(s) | 447, 693, 1041 |
| BseGI | GGATG | 2 cut(s) | 628, 1248 |
| BseJI | GATNNNNATC | 2 cut(s) | 363, 432 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 20, 56, 668, 698 |
| BseMI | GCAATG | 1 cut(s) | 707 |
| BseMII | CTCAG | 6 cut(s) | 276, 284, 387, 599, 918, 1194 |
| BseNI | ACTGG | 1 cut(s) | 703 |
| BseRI | GAGGAG | 1 cut(s) | 990 |
| BseXI | GCAGC | 1 cut(s) | 437 |
| Bsh1236I | CGCG | 1 cut(s) | 998 |
| BshFI | GGCC | 1 cut(s) | 1044 |
| BshNI | GGYRCC | 1 cut(s) | 881 |
| BsiHKCI | CYCGRG | 1 cut(s) | 632 |
| BsiSI | CCGG | 3 cut(s) | 18, 1025, 1045 |
| BslFI | GGGAC | 1 cut(s) | 783 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 20, 56, 668, 698 |
| BsmFI | GGGAC | 1 cut(s) | 783 |
| BsnI | GGCC | 1 cut(s) | 1044 |
| BsoBI | CYCGRG | 1 cut(s) | 632 |
| Bsp119I | TTCGAA | 1 cut(s) | 81 |
| Bsp143I | GATC | 8 cut(s) | 40, 296, 310, 433, 511, 675, 1008, 1047 |
| Bsp68I | TCGCGA | 1 cut(s) | 998 |
| BspACI | CCGC | 5 cut(s) | 21, 90, 143, 146, 889 |
| BspANI | GGCC | 1 cut(s) | 1044 |
| BspCNI | CTCAG | 6 cut(s) | 277, 283, 388, 598, 917, 1193 |
| BspFNI | CGCG | 1 cut(s) | 998 |
| BspLI | GGNNCC | 4 cut(s) | 513, 546, 799, 883 |
| BspMI | ACCTGC | 1 cut(s) | 106 |
| BspPI | GGATC | 5 cut(s) | 441, 506, 519, 1016, 1055 |
| BspQI | GCTCTTC | 1 cut(s) | 342 |
| BspT104I | TTCGAA | 1 cut(s) | 81 |
| BspT107I | GGYRCC | 1 cut(s) | 881 |
| BsrDI | GCAATG | 1 cut(s) | 707 |
| BsrI | ACTGG | 1 cut(s) | 703 |
| BssMI | GATC | 8 cut(s) | 40, 296, 310, 433, 511, 675, 1008, 1047 |
| BssSI | CACGAG | 1 cut(s) | 102 |
| Bst2BI | CACGAG | 1 cut(s) | 102 |
| Bst2UI | CCWGG | 3 cut(s) | 447, 693, 1041 |
| Bst4CI | ACNGT | 1 cut(s) | 163 |
| Bst6I | CTCTTC | 5 cut(s) | 231, 270, 342, 1077, 1146 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 98 |
| BstBI | TTCGAA | 1 cut(s) | 81 |
| BstC8I | GCNNGC | 2 cut(s) | 714, 1224 |
| BstF5I | GGATG | 2 cut(s) | 628, 1248 |
| BstFNI | CGCG | 1 cut(s) | 998 |
| BstKTI | GATC | 8 cut(s) | 43, 299, 313, 436, 514, 678, 1011, 1050 |
| BstMBI | GATC | 8 cut(s) | 40, 296, 310, 433, 511, 675, 1008, 1047 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 98, 124, 193 |
| BstNI | CCWGG | 3 cut(s) | 447, 693, 1041 |
| BstNSI | RCATGY | 2 cut(s) | 1259, 1330 |
| BstSCI | CCNGG | 4 cut(s) | 445, 691, 1023, 1039 |
| BstUI | CGCG | 1 cut(s) | 998 |
| BstV1I | GCAGC | 1 cut(s) | 437 |
| BstV2I | GAAGAC | 2 cut(s) | 710, 1099 |
| BstX2I | RGATCY | 2 cut(s) | 296, 511 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 959 |
| BstYI | RGATCY | 2 cut(s) | 296, 511 |
| Bsu36I | CCTNAGG | 1 cut(s) | 270 |
| BsuRI | GGCC | 1 cut(s) | 1044 |
| BtsCI | GGATG | 2 cut(s) | 628, 1248 |
| BtsI | GCAGTG | 1 cut(s) | 729 |
| BtsIMutI | CAGTG | 2 cut(s) | 696, 729 |
| BtuMI | TCGCGA | 1 cut(s) | 998 |
| BveI | ACCTGC | 1 cut(s) | 106 |
| Cac8I | GCNNGC | 2 cut(s) | 714, 1224 |
| CaiI | CAGNNNCTG | 3 cut(s) | 698, 1187, 1214 |
| Cfr13I | GGNCC | 4 cut(s) | 11, 134, 392, 797 |
| CseI | GACGC | 3 cut(s) | 905, 1226, 1261 |
| Csp6I | GTAC | 3 cut(s) | 321, 400, 476 |
| CviAII | CATG | 3 cut(s) | 934, 1256, 1327 |
| CviQI | GTAC | 3 cut(s) | 321, 400, 476 |
| DpnI | GATC | 8 cut(s) | 42, 298, 312, 435, 513, 677, 1010, 1049 |
| DpnII | GATC | 8 cut(s) | 40, 296, 310, 433, 511, 675, 1008, 1047 |
| Eam1104I | CTCTTC | 5 cut(s) | 231, 270, 342, 1077, 1146 |
| EarI | CTCTTC | 5 cut(s) | 231, 270, 342, 1077, 1146 |
| EciI | GGCGGA | 1 cut(s) | 36 |
| Eco32I | GATATC | 1 cut(s) | 1081 |
| Eco47I | GGWCC | 4 cut(s) | 11, 134, 392, 797 |
| Eco57I | CTGAAG | 3 cut(s) | 159, 723, 1155 |
| Eco81I | CCTNAGG | 1 cut(s) | 270 |
| Eco88I | CYCGRG | 1 cut(s) | 632 |
| EcoO109I | RGGNCCY | 2 cut(s) | 11, 134 |
| EcoRI | GAATTC | 1 cut(s) | 1064 |
| EcoRII | CCWGG | 3 cut(s) | 445, 691, 1039 |
| EcoRV | GATATC | 1 cut(s) | 1081 |
| EcoT22I | ATGCAT | 1 cut(s) | 468 |
| FaeI | CATG | 3 cut(s) | 937, 1259, 1330 |
| FaqI | GGGAC | 1 cut(s) | 783 |
| FatI | CATG | 3 cut(s) | 933, 1255, 1326 |
| FauNDI | CATATG | 1 cut(s) | 559 |
| Fnu4HI | GCNGC | 4 cut(s) | 90, 144, 147, 451 |
| FokI | GGATG | 2 cut(s) | 615, 1255 |
| Fsp4HI | GCNGC | 4 cut(s) | 90, 144, 147, 451 |
| GluI | GCNGC | 4 cut(s) | 90, 144, 147, 451 |
| HaeIII | GGCC | 1 cut(s) | 1044 |
| HapII | CCGG | 3 cut(s) | 18, 1025, 1045 |
| HgaI | GACGC | 3 cut(s) | 905, 1226, 1261 |
| Hin1II | CATG | 3 cut(s) | 937, 1259, 1330 |
| HindIII | AAGCTT | 2 cut(s) | 185, 803 |
| HpaII | CCGG | 3 cut(s) | 18, 1025, 1045 |
| HphI | GGTGA | 2 cut(s) | 175, 698 |
| Hpy166II | GTNNAC | 4 cut(s) | 323, 770, 1144, 1261 |
| Hpy188I | TCNGA | 4 cut(s) | 45, 588, 780, 1242 |
| Hpy8I | GTNNAC | 4 cut(s) | 323, 770, 1144, 1261 |
| Hpy99I | CGWCG | 2 cut(s) | 163, 1242 |
| HpyCH4III | ACNGT | 1 cut(s) | 163 |
| HpyCH4IV | ACGT | 3 cut(s) | 405, 916, 1096 |
| HpyCH4V | TGCA | 2 cut(s) | 466, 1206 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 98, 124, 193 |
| HpySE526I | ACGT | 3 cut(s) | 405, 916, 1096 |
| Hsp92II | CATG | 3 cut(s) | 937, 1259, 1330 |
| Kzo9I | GATC | 8 cut(s) | 40, 296, 310, 433, 511, 675, 1008, 1047 |
| LguI | GCTCTTC | 1 cut(s) | 342 |
| LmnI | GCTCC | 3 cut(s) | 205, 550, 1184 |
| Lsp1109I | GCAGC | 1 cut(s) | 437 |
| LweI | GCATC | 2 cut(s) | 453, 862 |
| MaeII | ACGT | 3 cut(s) | 405, 916, 1096 |
| MaeIII | GTNAC | 3 cut(s) | 163, 615, 1249 |
| MalI | GATC | 8 cut(s) | 42, 298, 312, 435, 513, 677, 1010, 1049 |
| MboI | GATC | 8 cut(s) | 40, 296, 310, 433, 511, 675, 1008, 1047 |
| MflI | RGATCY | 2 cut(s) | 296, 511 |
| MluCI | AATT | 4 cut(s) | 200, 654, 730, 1064 |
| MlyI | GAGTC | 3 cut(s) | 160, 563, 1024 |
| MmeI | TCCRAC | 2 cut(s) | 918, 1220 |
| MnlI | CCTC | 8 cut(s) | 105, 226, 279, 280, 566, 804, 968, 1080 |
| Mph1103I | ATGCAT | 1 cut(s) | 468 |
| MroXI | GAANNNNTTC | 3 cut(s) | 77, 774, 1308 |
| MseI | TTAA | 4 cut(s) | 600, 623, 657, 984 |
| MspI | CCGG | 3 cut(s) | 18, 1025, 1045 |
| MspR9I | CCNGG | 4 cut(s) | 447, 693, 1025, 1041 |
| MvaI | CCWGG | 3 cut(s) | 447, 693, 1041 |
| MvnI | CGCG | 1 cut(s) | 998 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 98, 124, 193 |
| NciI | CCSGG | 1 cut(s) | 1025 |
| NdeI | CATATG | 1 cut(s) | 559 |
| NdeII | GATC | 8 cut(s) | 40, 296, 310, 433, 511, 675, 1008, 1047 |
| NlaIII | CATG | 3 cut(s) | 937, 1259, 1330 |
| NlaIV | GGNNCC | 4 cut(s) | 513, 546, 799, 883 |
| NmuCI | GTSAC | 2 cut(s) | 163, 1249 |
| NruI | TCGCGA | 1 cut(s) | 998 |
| NsiI | ATGCAT | 1 cut(s) | 468 |
| NspI | RCATGY | 2 cut(s) | 1259, 1330 |
| NspV | TTCGAA | 1 cut(s) | 81 |
| PaqCI | CACCTGC | 1 cut(s) | 106 |
| PciI | ACATGT | 1 cut(s) | 1326 |
| PciSI | GCTCTTC | 1 cut(s) | 342 |
| PdmI | GAANNNNTTC | 3 cut(s) | 77, 774, 1308 |
| PfeI | GAWTC | 8 cut(s) | 28, 210, 250, 364, 493, 589, 775, 968 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 56, 698 |
| PkrI | GCNGC | 4 cut(s) | 91, 145, 148, 452 |
| PleI | GAGTC | 3 cut(s) | 160, 562, 1023 |
| PpsI | GAGTC | 3 cut(s) | 160, 562, 1023 |
| PpuMI | RGGWCCY | 2 cut(s) | 11, 134 |
| PscI | ACATGT | 1 cut(s) | 1326 |
| Psp5II | RGGWCCY | 2 cut(s) | 11, 134 |
| Psp6I | CCWGG | 3 cut(s) | 445, 691, 1039 |
| PspGI | CCWGG | 3 cut(s) | 445, 691, 1039 |
| PspN4I | GGNNCC | 4 cut(s) | 513, 546, 799, 883 |
| PspPI | GGNCC | 4 cut(s) | 11, 134, 392, 797 |
| PspPPI | RGGWCCY | 2 cut(s) | 11, 134 |
| PstNI | CAGNNNCTG | 3 cut(s) | 698, 1187, 1214 |
| PsuI | RGATCY | 2 cut(s) | 296, 511 |
| RruI | TCGCGA | 1 cut(s) | 998 |
| RsaI | GTAC | 3 cut(s) | 322, 401, 477 |
| RsaNI | GTAC | 3 cut(s) | 321, 400, 476 |
| SapI | GCTCTTC | 1 cut(s) | 342 |
| SaqAI | TTAA | 4 cut(s) | 600, 623, 657, 984 |
| SatI | GCNGC | 4 cut(s) | 90, 144, 147, 451 |
| Sau3AI | GATC | 8 cut(s) | 40, 296, 310, 433, 511, 675, 1008, 1047 |
| Sau96I | GGNCC | 4 cut(s) | 11, 134, 392, 797 |
| ScaI | AGTACT | 1 cut(s) | 401 |
| SchI | GAGTC | 3 cut(s) | 160, 563, 1024 |
| ScrFI | CCNGG | 4 cut(s) | 447, 693, 1025, 1041 |
| SfaNI | GCATC | 2 cut(s) | 453, 862 |
| SfuI | TTCGAA | 1 cut(s) | 81 |
| SinI | GGWCC | 4 cut(s) | 11, 134, 392, 797 |
| Sse9I | AATT | 4 cut(s) | 200, 654, 730, 1064 |
| SsiI | CCGC | 5 cut(s) | 21, 90, 143, 146, 889 |
| StyD4I | CCNGG | 4 cut(s) | 445, 691, 1023, 1039 |
| TaaI | ACNGT | 1 cut(s) | 163 |
| TaiI | ACGT | 3 cut(s) | 408, 919, 1099 |
| TaqI | TCGA | 5 cut(s) | 81, 190, 1011, 1050, 1062 |
| TasI | AATT | 4 cut(s) | 200, 654, 730, 1064 |
| TatI | WGTACW | 1 cut(s) | 399 |
| TauI | GCSGC | 3 cut(s) | 92, 146, 149 |
| TfiI | GAWTC | 8 cut(s) | 28, 210, 250, 364, 493, 589, 775, 968 |
| Tru1I | TTAA | 4 cut(s) | 600, 623, 657, 984 |
| Tru9I | TTAA | 4 cut(s) | 600, 623, 657, 984 |
| TscAI | CASTG | 2 cut(s) | 703, 729 |
| TseFI | GTSAC | 2 cut(s) | 163, 1249 |
| TseI | GCWGC | 1 cut(s) | 450 |
| Tsp45I | GTSAC | 2 cut(s) | 163, 1249 |
| TspDTI | ATGAA | 5 cut(s) | 519, 545, 657, 847, 1259 |
| TspGWI | ACGGA | 1 cut(s) | 136 |
| TspRI | CASTG | 2 cut(s) | 703, 729 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 56, 698 |
| VpaK11BI | GGWCC | 4 cut(s) | 11, 134, 392, 797 |
| XapI | RAATTY | 2 cut(s) | 730, 1064 |
| XceI | RCATGY | 2 cut(s) | 1259, 1330 |
| XmnI | GAANNNNTTC | 3 cut(s) | 77, 774, 1308 |
| ZrmI | AGTACT | 1 cut(s) | 401 |
| Zsp2I | ATGCAT | 1 cut(s) | 468 |