AT2G21195

No description available

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
9083144 .. 9083909
766 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G21195.3

Sequence Viewer

Length: 282 bp
ATGGAACCGCCGGCCACCGCATCTAATCGCTCTTCCAGACGGCTACTCTTTGACCGCCGTTACGGCTGGGTGGTCGACGAATGGAAGGACCCATCGGAGGAAGCTCTCGCCGGCGGCAGAGGAATGTTTTGTGTAGTTCCCTTGACGAAAACTCTGTTTCAGACAGCTTCACAATCAATGAACTCAGCTGTCAAATTTCTGGATATGAAGTTTCAGAAATTGGCAAATCCTATGCACAATCCAAGTGGAGATTTAGGGTCAAAATCAAATGTGTTGGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

93

Amino Acids

10.36

Weight (kDa)

8.93

Isoelectric Point (pI)

57.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013362)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G21195 AT2G21195 AT2G21195 AT2G21195
fragaria_vesca FvH4_2g00852
malus_domestica MD05G1004000.v1.1
prunus_persica Prupe.8G007200_v2.0.a1
pyrus_communis pycom05g00350
rosa_chinensis RchiOBHm_Chr6g0251251
rosa_laevigata RLG00000015470
rosa_multiflora Rmu_sc0015396.1_g000005
rosa_roxburghii Rroxscaffold_7G00216880
rosa_rugosa Rorug05G0501200
rosa_samantha Rh6AG010600 Rh6BG001400 Rh6CG007600 Rh6DG008000
rosa_wichuraiana Rw6G001200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 75
AciI CCGC 4 cut(s) 8, 18, 55, 114
AcoI YGGCCR 1 cut(s) 12
AcsI RAATTY 1 cut(s) 194
AfiI CCNNNNNNNGG 1 cut(s) 97
AluBI AGCT 3 cut(s) 104, 167, 188
AluI AGCT 3 cut(s) 104, 167, 188
AoxI GGCC 1 cut(s) 12
ApoI RAATTY 1 cut(s) 194
AspS9I GGNCC 1 cut(s) 88
AvaII GGWCC 1 cut(s) 88
BccI CCATC 1 cut(s) 100
BceAI ACGGC 3 cut(s) 42, 56, 79
BglI GCCNNNNNGGC 1 cut(s) 63
BisI GCNGC 1 cut(s) 115
BlsI GCNGC 1 cut(s) 116
Bme18I GGWCC 1 cut(s) 88
BmgT120I GGNCC 1 cut(s) 88
BmiI GGNNCC 2 cut(s) 6, 90
BmsI GCATC 1 cut(s) 29
Bsc4I CCNNNNNNNGG 1 cut(s) 97
Bse118I RCCGGY 2 cut(s) 10, 110
BseLI CCNNNNNNNGG 1 cut(s) 97
BseMII CTCAG 1 cut(s) 198
BseYI CCCAGC 1 cut(s) 66
BshFI GGCC 1 cut(s) 14
BsiSI CCGG 2 cut(s) 11, 111
BslI CCNNNNNNNGG 1 cut(s) 97
BsnI GGCC 1 cut(s) 14
BspACI CCGC 4 cut(s) 8, 18, 55, 114
BspANI GGCC 1 cut(s) 14
BspCNI CTCAG 1 cut(s) 197
BspLI GGNNCC 2 cut(s) 6, 90
BspQI GCTCTTC 1 cut(s) 37
BsrFI RCCGGY 2 cut(s) 10, 110
BssAI RCCGGY 2 cut(s) 10, 110
Bst6I CTCTTC 1 cut(s) 37
BstC8I GCNNGC 2 cut(s) 12, 112
BstDEI CTNAG 1 cut(s) 184
BstMWI GCNNNNNNNGC 1 cut(s) 63
BsuRI GGCC 1 cut(s) 14
Cac8I GCNNGC 2 cut(s) 12, 112
Cfr10I RCCGGY 2 cut(s) 10, 110
Cfr13I GGNCC 1 cut(s) 88
CspCI CAANNNNNGTGG 2 cut(s) 226, 261
CviJI RGCY 6 cut(s) 14, 43, 66, 104, 167, 188
CviKI_1 RGCY 6 cut(s) 14, 43, 66, 104, 167, 188
DdeI CTNAG 1 cut(s) 184
EaeI YGGCCR 1 cut(s) 12
Eam1104I CTCTTC 1 cut(s) 37
EarI CTCTTC 1 cut(s) 37
Eco47I GGWCC 1 cut(s) 88
EcoO109I RGGNCCY 1 cut(s) 88
FaiI YATR 2 cut(s) 206, 233
FblI GTMKAC 1 cut(s) 75
Fnu4HI GCNGC 1 cut(s) 115
Fsp4HI GCNGC 1 cut(s) 115
GluI GCNGC 1 cut(s) 115
GsaI CCCAGC 1 cut(s) 70
HaeIII GGCC 1 cut(s) 14
HapII CCGG 2 cut(s) 11, 111
HincII GTYRAC 1 cut(s) 76
HindII GTYRAC 1 cut(s) 76
HpaII CCGG 2 cut(s) 11, 111
Hpy166II GTNNAC 1 cut(s) 76
Hpy188I TCNGA 3 cut(s) 97, 162, 216
Hpy188III TCNNGA 2 cut(s) 36, 200
Hpy8I GTNNAC 1 cut(s) 76
Hpy99I CGWCG 1 cut(s) 80
HpyAV CCTTC 1 cut(s) 79
HpyCH4V TGCA 1 cut(s) 235
HpyF10VI GCNNNNNNNGC 1 cut(s) 63
HpyF3I CTNAG 1 cut(s) 184
KroI GCCGGC 2 cut(s) 10, 110
KroNI GCCGGC 2 cut(s) 12, 112
LguI GCTCTTC 1 cut(s) 37
LpnPI CCDG 5 cut(s) 24, 49, 52, 124, 185
LweI GCATC 1 cut(s) 29
MaeIII GTNAC 1 cut(s) 59
MboII GAAGA 1 cut(s) 24
MluCI AATT 2 cut(s) 194, 218
MmeI TCCRAC 1 cut(s) 255
MnlI CCTC 2 cut(s) 91, 113
MreI CGCCGGCG 1 cut(s) 110
MroNI GCCGGC 2 cut(s) 10, 110
MseI TTAA 1 cut(s) 280
MspA1I CMGCKG 1 cut(s) 188
MspI CCGG 2 cut(s) 11, 111
MwoI GCNNNNNNNGC 1 cut(s) 63
NaeI GCCGGC 2 cut(s) 12, 112
NgoMIV GCCGGC 2 cut(s) 10, 110
NlaIV GGNNCC 2 cut(s) 6, 90
PciSI GCTCTTC 1 cut(s) 37
PdiI GCCGGC 2 cut(s) 12, 112
PkrI GCNGC 1 cut(s) 116
PpuMI RGGWCCY 1 cut(s) 88
Psp5II RGGWCCY 1 cut(s) 88
PspFI CCCAGC 1 cut(s) 66
PspN4I GGNNCC 2 cut(s) 6, 90
PspPI GGNCC 1 cut(s) 88
PspPPI RGGWCCY 1 cut(s) 88
PvuII CAGCTG 1 cut(s) 188
SalI GTCGAC 1 cut(s) 74
SapI GCTCTTC 1 cut(s) 37
SaqAI TTAA 1 cut(s) 280
SatI GCNGC 1 cut(s) 115
Sau96I GGNCC 1 cut(s) 88
SetI ASST 3 cut(s) 106, 169, 190
SfaNI GCATC 1 cut(s) 29
SgeI CNNG 8 cut(s) 23, 48, 79, 119, 123, 154, 212, 255
SgrAI CRCCGGYG 1 cut(s) 110
SinI GGWCC 1 cut(s) 88
Sse9I AATT 2 cut(s) 194, 218
SsiI CCGC 4 cut(s) 8, 18, 55, 114
TaqI TCGA 1 cut(s) 75
TasI AATT 2 cut(s) 194, 218
TauI GCSGC 1 cut(s) 117
Tru1I TTAA 1 cut(s) 280
Tru9I TTAA 1 cut(s) 280
TspDTI ATGAA 2 cut(s) 194, 221
VpaK11BI GGWCC 1 cut(s) 88
XapI RAATTY 1 cut(s) 194
XmiI GTMKAC 1 cut(s) 75
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.