AT2G24010

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
10214574 .. 10217739
3166 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G24010.3

Sequence Viewer

Length: 1365 bp
ATGGCAAGAATCCACTTAATCATTATACTACTAGTGATTTCATCGACATCATCATCATCATCATCATTAAGAGAGCAAGAGGAGGACATGATCAAGGCACTTCCAGGGCAACCGCAAGTAGGATTCTCACAGTTTTCGGGTTATGTGACTGTGAACGAGTCACATGGTCGATCACTTTTCTACTGGCTTACAGAGTCCCCTTCTTCTTCTCACACCAAACCACTTCTTCTTTGGCTCAATGGAGGACCGGGTTGCTCATCGATTGGTTATGGAGCTTCGGAGGAAATTGGACCGTTTCGGATCAATAAAACCGGTTCTAATCTCTATCTCAACAAGTTTACGTGGAACACAGAAGCGAATATTTTGTTTCTTGAATCGCCGGCTGGAGTTGGATTTTCGTACACTAACACAAGCTCTGATCTTAAAGATTCTGGGGACGAACGGACTGCTCAGGAAAATTTGATATTTCTAATTAAATGGATGTCGAGATTTCCTCAGTACCAATATAGAGATTTCTACATTGTTGGTGAAAGCTACGCTGGTCATTATGTTCCTCAGCTTGCCAAAAAGATCCATCTCTACAACAAAGCTTTCAACAATACACCCATCATTAACCTCAAAGGATTCATGGTGGGAAATGGAGATATGGACAAGCATTACGACAGATTAGGAGCCGCCATGTATGCGTGGTCACACGCAATGATCTCTGACAAAACTTACAAGTCTATCCTCAAACACTGCAGCTTCACTGCGGATAAAACCTCGGACAAGTGCAATTGGGCACTCTACTTCGCCTACAGAGAGTTTGGCAAAGTCAATGGGTACAGCATCTACTCACCCTCATGTGTACATCAAACCAACCAGACCAAGTTCCTGCATGGACGGCTTTTGGTAGAGGAATACGAGTACGACCCTTGTACCGAAAGCTACGCTGAGATATATTACAACCGTCCTGATGTGCAACGAGCTATGCACGCTAATCTTACCTCCATTCCTTATAAGTGGACATTGTGCAATATGGTTGTGAATAACAACTGGAAAGATTCCGAGTTTTCAATGTTGCCGATATACAAGGAACTCACTGCCGCTGGTTTGAGGATCTGGGTCTTTAGTGGCGATACAGACGCAGTGGTTCCAGTGACTGGGACTCGACTTGCCCTCAGTAAACTCAATCTTCCGGTGAAAACTCCCTGGTACCCTTGGTACTCCGAAAAGCAGGTGGGAGGATGGACAGAGGTATATGAGGGGCTTACCTTTGCGACGATAAGAGGGGCGGGCCACGAAGTGCCGGTGTTGCAACCCGAGCGTGCTCTCACTCTTTTAAGATCGTTCTTGGCCGGCAAAGAGCTTCCAAGATCTTATTAG

Protein Analysis

454

Amino Acids

51.53

Weight (kDa)

7.63

Isoelectric Point (pI)

45.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 6 - 197 2.2e-68 Serine carboxypeptidase
Peptidase_S10 PF00450 221 - 457 4.5e-59 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 999
AarI CACCTGC 1 cut(s) 1207
Acc36I ACCTGC 1 cut(s) 1207
Acc65I GGTACC 1 cut(s) 1194
AccB1I GGYRCC 1 cut(s) 1194
AccB7I CCANNNNNTGG 1 cut(s) 1142
AciI CCGC 5 cut(s) 113, 675, 752, 1086, 1274
AclWI GGATC 3 cut(s) 308, 565, 1106
AcoI YGGCCR 1 cut(s) 1335
AcsI RAATTY 1 cut(s) 457
AdeI CACNNNGTG 1 cut(s) 1285
AfaI GTAC 8 cut(s) 401, 500, 824, 849, 908, 919, 1196, 1205
AfiI CCNNNNNNNGG 2 cut(s) 119, 1142
AgeI ACCGGT 1 cut(s) 311
AgsI TTSAA 3 cut(s) 374, 595, 1056
AhlI ACTAGT 1 cut(s) 31
AjnI CCWGG 2 cut(s) 103, 1190
AluBI AGCT 9 cut(s) 275, 414, 534, 559, 590, 744, 927, 968, 1348
AluI AGCT 9 cut(s) 275, 414, 534, 559, 590, 744, 927, 968, 1348
Alw21I GWGCWC 1 cut(s) 1312
AlwI GGATC 3 cut(s) 308, 565, 1106
AlwNI CAGNNNCTG 1 cut(s) 1142
Ama87I CYCGRG 1 cut(s) 1301
AoxI GGCC 2 cut(s) 1276, 1335
ApeKI GCWGC 1 cut(s) 741
ApoI RAATTY 1 cut(s) 457
AsiGI ACCGGT 1 cut(s) 311
Asp718I GGTACC 1 cut(s) 1194
AspS9I GGNCC 3 cut(s) 245, 290, 1276
AsuC2I CCSGG 1 cut(s) 249
AsuHPI GGTGA 3 cut(s) 539, 828, 1192
AvaI CYCGRG 1 cut(s) 1301
AvaII GGWCC 2 cut(s) 245, 290
BaeGI GKGCMC 1 cut(s) 784
BaeI ACNNNNGTAYC 2 cut(s) 901, 934
BanI GGYRCC 1 cut(s) 1194
Bbv12I GWGCWC 1 cut(s) 1312
BbvCI CCTCAGC 1 cut(s) 555
BbvI GCAGC 1 cut(s) 753
BccI CCATC 3 cut(s) 582, 614, 1221
BceAI ACGGC 1 cut(s) 899
BcgI CGANNNNNNTGC 2 cut(s) 428, 462
BciT130I CCWGG 2 cut(s) 105, 1192
BclI TGATCA 1 cut(s) 90
BcnI CCSGG 1 cut(s) 249
BcuI ACTAGT 1 cut(s) 31
BfaI CTAG 1 cut(s) 32
BfmI CTRYAG 2 cut(s) 739, 796
BfuAI ACCTGC 1 cut(s) 1207
BglII AGATCT 1 cut(s) 1355
BisI GCNGC 3 cut(s) 675, 742, 1086
BlsI GCNGC 3 cut(s) 676, 743, 1087
Bme1390I CCNGG 3 cut(s) 105, 249, 1192
Bme18I GGWCC 2 cut(s) 245, 290
BmeT110I CYCGRG 1 cut(s) 1301
BmgT120I GGNCC 3 cut(s) 245, 290, 1276
BmiI GGNNCC 3 cut(s) 673, 1134, 1196
BmrFI CCNGG 3 cut(s) 105, 249, 1192
BmrI ACTGGG 1 cut(s) 1152
BmsI GCATC 1 cut(s) 837
BmuI ACTGGG 1 cut(s) 1152
BplI GAGNNNNNCTC 2 cut(s) 478, 510
BpmI CTGGAG 1 cut(s) 405
Bpu10I CCTNAGC 2 cut(s) 450, 555
BpuMI CCSGG 1 cut(s) 249
Bsa29I ATCGAT 1 cut(s) 260
BsaAI YACGTR 1 cut(s) 342
BsaJI CCNNGG 4 cut(s) 104, 762, 1190, 1199
BsaWI WCCGGW 2 cut(s) 311, 1177
Bsc4I CCNNNNNNNGG 2 cut(s) 119, 1142
Bse118I RCCGGY 4 cut(s) 311, 379, 1288, 1337
Bse1I ACTGG 4 cut(s) 188, 1040, 1136, 1147
Bse3DI GCAATG 1 cut(s) 705
BseBI CCWGG 2 cut(s) 105, 1192
BseCI ATCGAT 1 cut(s) 260
BseDI CCNNGG 4 cut(s) 104, 762, 1190, 1199
BseGI GGATG 2 cut(s) 486, 1232
BseLI CCNNNNNNNGG 2 cut(s) 119, 1142
BseMI GCAATG 1 cut(s) 705
BseMII CTCAG 5 cut(s) 464, 509, 569, 924, 1174
BseNI ACTGG 4 cut(s) 188, 1040, 1136, 1147
BseRI GAGGAG 1 cut(s) 95
BseSI GKGCMC 1 cut(s) 784
BseXI GCAGC 1 cut(s) 753
BshFI GGCC 2 cut(s) 1278, 1337
BshNI GGYRCC 1 cut(s) 1194
BshTI ACCGGT 1 cut(s) 311
BshVI ATCGAT 1 cut(s) 260
BsiHKAI GWGCWC 1 cut(s) 1312
BsiHKCI CYCGRG 1 cut(s) 1301
BsiSI CCGG 6 cut(s) 248, 312, 380, 1178, 1289, 1338
BslFI GGGAC 3 cut(s) 181, 449, 1159
BslI CCNNNNNNNGG 2 cut(s) 119, 1142
BsmFI GGGAC 3 cut(s) 181, 449, 1159
BsnI GGCC 2 cut(s) 1278, 1337
BsoBI CYCGRG 1 cut(s) 1301
Bsp1286I GDGCHC 2 cut(s) 784, 1312
Bsp1407I TGTACA 1 cut(s) 847
Bsp143I GATC 9 cut(s) 90, 170, 300, 418, 570, 702, 1098, 1325, 1355
BspACI CCGC 5 cut(s) 113, 675, 752, 1086, 1274
BspANI GGCC 2 cut(s) 1278, 1337
BspCNI CTCAG 5 cut(s) 463, 508, 568, 925, 1173
BspDI ATCGAT 1 cut(s) 260
BspLI GGNNCC 3 cut(s) 673, 1134, 1196
BspMAI CTGCAG 1 cut(s) 743
BspMI ACCTGC 1 cut(s) 1207
BspPI GGATC 3 cut(s) 308, 565, 1106
BspT107I GGYRCC 1 cut(s) 1194
BsrDI GCAATG 1 cut(s) 705
BsrFI RCCGGY 4 cut(s) 311, 379, 1288, 1337
BsrGI TGTACA 1 cut(s) 847
BsrI ACTGG 4 cut(s) 188, 1040, 1136, 1147
BssAI RCCGGY 4 cut(s) 311, 379, 1288, 1337
BssECI CCNNGG 4 cut(s) 104, 762, 1190, 1199
BssMI GATC 9 cut(s) 90, 170, 300, 418, 570, 702, 1098, 1325, 1355
BssT1I CCWWGG 1 cut(s) 1199
Bst2UI CCWGG 2 cut(s) 105, 1192
Bst4CI ACNGT 4 cut(s) 132, 151, 294, 950
BstAUI TGTACA 1 cut(s) 847
BstBAI YACGTR 1 cut(s) 342
BstC8I GCNNGC 6 cut(s) 381, 561, 975, 1276, 1308, 1339
BstDEI CTNAG 5 cut(s) 450, 495, 555, 933, 1160
BstF5I GGATG 2 cut(s) 486, 1232
BstKTI GATC 9 cut(s) 93, 173, 303, 421, 573, 705, 1101, 1328, 1358
BstMBI GATC 9 cut(s) 90, 170, 300, 418, 570, 702, 1098, 1325, 1355
BstMWI GCNNNNNNNGC 5 cut(s) 683, 883, 974, 1294, 1303
BstNI CCWGG 2 cut(s) 105, 1192
BstSCI CCNGG 3 cut(s) 103, 247, 1190
BstSFI CTRYAG 2 cut(s) 739, 796
BstSLI GKGCMC 1 cut(s) 784
BstV1I GCAGC 1 cut(s) 753
BstX2I RGATCY 3 cut(s) 570, 1098, 1355
BstYI RGATCY 3 cut(s) 570, 1098, 1355
Bsu15I ATCGAT 1 cut(s) 260
BsuRI GGCC 2 cut(s) 1278, 1337
BsuTUI ATCGAT 1 cut(s) 260
BtsCI GGATG 2 cut(s) 486, 1232
BtsI GCAGTG 4 cut(s) 736, 747, 1080, 1134
BtsIMutI CAGTG 5 cut(s) 736, 747, 1080, 1134, 1143
BveI ACCTGC 1 cut(s) 1207
Cac8I GCNNGC 6 cut(s) 381, 561, 975, 1276, 1308, 1339
CaiI CAGNNNCTG 1 cut(s) 1142
Cfr10I RCCGGY 4 cut(s) 311, 379, 1288, 1337
Cfr13I GGNCC 3 cut(s) 245, 290, 1276
ClaI ATCGAT 1 cut(s) 260
CseI GACGC 1 cut(s) 1133
Csp6I GTAC 8 cut(s) 400, 499, 823, 848, 907, 918, 1195, 1204
CspAI ACCGGT 1 cut(s) 311
CviAII CATG 6 cut(s) 88, 164, 628, 679, 843, 878
CviQI GTAC 8 cut(s) 400, 499, 823, 848, 907, 918, 1195, 1204
DdeI CTNAG 5 cut(s) 450, 495, 555, 933, 1160
DpnI GATC 9 cut(s) 92, 172, 302, 420, 572, 704, 1100, 1327, 1357
DpnII GATC 9 cut(s) 90, 170, 300, 418, 570, 702, 1098, 1325, 1355
DraIII CACNNNGTG 1 cut(s) 1285
EaeI YGGCCR 1 cut(s) 1335
Eco130I CCWWGG 1 cut(s) 1199
Eco47I GGWCC 2 cut(s) 245, 290
Eco88I CYCGRG 1 cut(s) 1301
EcoRII CCWGG 2 cut(s) 103, 1190
EcoT14I CCWWGG 1 cut(s) 1199
ErhI CCWWGG 1 cut(s) 1199
FaeI CATG 6 cut(s) 91, 167, 631, 682, 846, 881
FaqI GGGAC 3 cut(s) 181, 449, 1159
FatI CATG 6 cut(s) 87, 163, 627, 678, 842, 877
FauI CCCGC 1 cut(s) 1267
FbaI TGATCA 1 cut(s) 90
Fnu4HI GCNGC 3 cut(s) 675, 742, 1086
FokI GGATG 2 cut(s) 493, 1239
Fsp4HI GCNGC 3 cut(s) 675, 742, 1086
FspBI CTAG 1 cut(s) 32
GluI GCNGC 3 cut(s) 675, 742, 1086
GsuI CTGGAG 1 cut(s) 405
HaeIII GGCC 2 cut(s) 1278, 1337
HapII CCGG 6 cut(s) 248, 312, 380, 1178, 1289, 1338
HgaI GACGC 1 cut(s) 1133
Hin1II CATG 6 cut(s) 91, 167, 631, 682, 846, 881
HindIII AAGCTT 1 cut(s) 588
HinfI GANTC 9 cut(s) 9, 123, 158, 194, 374, 428, 624, 1043, 1147
HpaII CCGG 6 cut(s) 248, 312, 380, 1178, 1289, 1338
HphI GGTGA 3 cut(s) 539, 828, 1192
Hpy166II GTNNAC 6 cut(s) 154, 339, 402, 848, 1005, 1166
Hpy188I TCNGA 7 cut(s) 280, 300, 418, 709, 766, 1048, 1210
Hpy188III TCNNGA 4 cut(s) 371, 452, 486, 953
Hpy8I GTNNAC 6 cut(s) 154, 339, 402, 848, 1005, 1166
Hpy99I CGWCG 1 cut(s) 1264
HpyAV CCTTC 1 cut(s) 210
HpyCH4III ACNGT 4 cut(s) 132, 151, 294, 950
HpyCH4IV ACGT 1 cut(s) 341
HpyCH4V TGCA 7 cut(s) 741, 774, 877, 961, 973, 1014, 1297
HpyF10VI GCNNNNNNNGC 5 cut(s) 683, 883, 974, 1294, 1303
HpyF3I CTNAG 5 cut(s) 450, 495, 555, 933, 1160
HpySE526I ACGT 1 cut(s) 341
Hsp92II CATG 6 cut(s) 91, 167, 631, 682, 846, 881
KpnI GGTACC 1 cut(s) 1198
KroI GCCGGC 2 cut(s) 379, 1337
KroNI GCCGGC 2 cut(s) 381, 1339
Ksp22I TGATCA 1 cut(s) 90
Kzo9I GATC 9 cut(s) 90, 170, 300, 418, 570, 702, 1098, 1325, 1355
LmnI GCTCC 2 cut(s) 272, 671
Lsp1109I GCAGC 1 cut(s) 753
LweI GCATC 1 cut(s) 837
MaeI CTAG 1 cut(s) 32
MaeII ACGT 1 cut(s) 341
MaeIII GTNAC 4 cut(s) 145, 159, 690, 1138
MalI GATC 9 cut(s) 92, 172, 302, 420, 572, 704, 1100, 1327, 1357
MboI GATC 9 cut(s) 90, 170, 300, 418, 570, 702, 1098, 1325, 1355
MboII GAAGA 4 cut(s) 195, 198, 218, 1166
MfeI CAATTG 1 cut(s) 775
MflI RGATCY 3 cut(s) 570, 1098, 1355
MhlI GDGCHC 2 cut(s) 784, 1312
MluCI AATT 4 cut(s) 285, 457, 471, 775
MlyI GAGTC 3 cut(s) 167, 203, 1141
MmeI TCCRAC 1 cut(s) 370
MroNI GCCGGC 2 cut(s) 379, 1337
MseI TTAA 6 cut(s) 17, 68, 423, 474, 612, 1322
MslI CAYNNNNRTG 1 cut(s) 841
MspA1I CMGCKG 1 cut(s) 1088
MspI CCGG 6 cut(s) 248, 312, 380, 1178, 1289, 1338
MspR9I CCNGG 3 cut(s) 105, 249, 1192
MunI CAATTG 1 cut(s) 775
MvaI CCWGG 2 cut(s) 105, 1192
MwoI GCNNNNNNNGC 5 cut(s) 683, 883, 974, 1294, 1303
NaeI GCCGGC 2 cut(s) 381, 1339
NciI CCSGG 1 cut(s) 249
NdeII GATC 9 cut(s) 90, 170, 300, 418, 570, 702, 1098, 1325, 1355
NgoMIV GCCGGC 2 cut(s) 379, 1337
NlaIII CATG 6 cut(s) 91, 167, 631, 682, 846, 881
NlaIV GGNNCC 3 cut(s) 673, 1134, 1196
NmuCI GTSAC 4 cut(s) 145, 159, 690, 1138
PaqCI CACCTGC 1 cut(s) 1207
PdiI GCCGGC 2 cut(s) 381, 1339
PfeI GAWTC 6 cut(s) 9, 123, 374, 428, 624, 1043
PflMI CCANNNNNTGG 1 cut(s) 1142
PinAI ACCGGT 1 cut(s) 311
PkrI GCNGC 3 cut(s) 676, 743, 1087
PleI GAGTC 3 cut(s) 166, 202, 1141
PpsI GAGTC 3 cut(s) 166, 202, 1141
Ppu21I YACGTR 1 cut(s) 342
PsiI TTATAA 1 cut(s) 999
Psp6I CCWGG 2 cut(s) 103, 1190
PspGI CCWGG 2 cut(s) 103, 1190
PspN4I GGNNCC 3 cut(s) 673, 1134, 1196
PspPI GGNCC 3 cut(s) 245, 290, 1276
PstI CTGCAG 1 cut(s) 743
PstNI CAGNNNCTG 1 cut(s) 1142
PsuI RGATCY 3 cut(s) 570, 1098, 1355
RsaI GTAC 8 cut(s) 401, 500, 824, 849, 908, 919, 1196, 1205
RsaNI GTAC 8 cut(s) 400, 499, 823, 848, 907, 918, 1195, 1204
RseI CAYNNNNRTG 1 cut(s) 841
SaqAI TTAA 6 cut(s) 17, 68, 423, 474, 612, 1322
SatI GCNGC 3 cut(s) 675, 742, 1086
Sau3AI GATC 9 cut(s) 90, 170, 300, 418, 570, 702, 1098, 1325, 1355
Sau96I GGNCC 3 cut(s) 245, 290, 1276
SchI GAGTC 3 cut(s) 167, 203, 1141
ScrFI CCNGG 3 cut(s) 105, 249, 1192
SduI GDGCHC 2 cut(s) 784, 1312
SfaNI GCATC 1 cut(s) 837
SfcI CTRYAG 2 cut(s) 739, 796
SinI GGWCC 2 cut(s) 245, 290
SmiMI CAYNNNNRTG 1 cut(s) 841
SpeI ACTAGT 1 cut(s) 31
Sse9I AATT 4 cut(s) 285, 457, 471, 775
SsiI CCGC 5 cut(s) 113, 675, 752, 1086, 1274
SspI AATATT 1 cut(s) 361
SspMI CTAG 1 cut(s) 32
StyD4I CCNGG 3 cut(s) 103, 247, 1190
StyI CCWWGG 1 cut(s) 1199
TaaI ACNGT 4 cut(s) 132, 151, 294, 950
TaiI ACGT 1 cut(s) 344
TaqI TCGA 5 cut(s) 44, 169, 260, 485, 1150
TasI AATT 4 cut(s) 285, 457, 471, 775
TatI WGTACW 1 cut(s) 847
TauI GCSGC 2 cut(s) 677, 1088
TfiI GAWTC 6 cut(s) 9, 123, 374, 428, 624, 1043
Tru1I TTAA 6 cut(s) 17, 68, 423, 474, 612, 1322
Tru9I TTAA 6 cut(s) 17, 68, 423, 474, 612, 1322
TscAI CASTG 5 cut(s) 743, 754, 1087, 1134, 1143
TseFI GTSAC 4 cut(s) 145, 159, 690, 1138
TseI GCWGC 1 cut(s) 741
Tsp45I GTSAC 4 cut(s) 145, 159, 690, 1138
TspDTI ATGAA 2 cut(s) 30, 616
TspGWI ACGGA 1 cut(s) 457
TspRI CASTG 5 cut(s) 743, 754, 1087, 1134, 1143
Van91I CCANNNNNTGG 1 cut(s) 1142
VpaK11BI GGWCC 2 cut(s) 245, 290
XapI RAATTY 1 cut(s) 457
XcmI CCANNNNNNNNNTGG 1 cut(s) 228
XspI CTAG 1 cut(s) 32
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.