AT4G30610

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
14944129 .. 14948605
4477 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G30610.1

Sequence Viewer

Length: 1398 bp
ATGGCAAGAACCCATTTCATTTTCCTTCTTCTTGTAGCTCTTTTATCGACAACATTTCCATCATCATCATCTTCAAGAGAGCAAGAGAAGGACAGAATCAAAGCACTTCCAGGCCAACCAAAAGTGGCATTCTCACAATACTCAGGCTATGTCAATGTTAACCAGTCTCATGGTCGTGCCCTCTTCTATTGGCTTACTGAGTCATCTTCTCCTTCTCCCCACACCAAGCCCCTTCTTCTTTGGCTCAATGGAGGACCGGGCTGCTCGTCGATTGCTTATGGAGCTTCAGAGGAAATTGGACCGTTTCGTATCAACAAAACCGGTTCCAATCTCTATCTCAACAAGTTCGCTTGGAACAAAGACGCAAACCTTCTGTTTCTTGAATCACCGGCCGGAGTTGGATATTCCTACACGAACACAAGCTCCGATCTTAAAGACTCCGGAGATGAACGAACAGCTCAAGACAACTTGATATTTCTTATCAAATGGTTATCGAGATTTCCTCAATACAAATACAGAGACTTCTATATCGCTGGTGAAAGCTATGCCGGGCATTATGTTCCTCAGCTTGCCAAAAAGATAAATGACTACAACAAAGCTTTCTCCAAACCAATCATTAATCTCAAAGGATTCTTGGTGGGAAATGCAGTGACGGACAATCAGTACGACAGTATAGGAACAGTAACTTACTGGTGGACTCACGCAATTATCTCCGACAAAAGCTACAAGTCAATCCTCAAATACTGCAATTTCACGGTGGAGAGAGTTTCCGACGATTGCGACAATGCGGTTAACTACGCTATGAACCATGAGTTTGGTGACATTGATCAGTACAGCATTTACACCCCAACGTGCGTGGCTGCTCAACAGAAGAAGAACACAACCGGTTTCTTTGTGCGGATGAAGAACACACTCTTGCGTAGACGGTTAGTGTCTGGCTATGATCCTTGTACGGAGAGTTATGCAGAGAAGTATTTTAACCGTCCCGATGTTCAGAGAGCCATGCACGCTAATGTTACTGGAATTCGCTATAAATGGACAGCTTGCAGTGATGTTCTGATCAAGACCTGGAAAGATTCGGACAAGACCATGTTGCCCATATACAAGGAACTTGCAGCGTCCGGTTTGAGGATCTGGATTTTCAGCGGTGATACAGACTCGGTGGTTCCAGTGACCGCGACACGGTTTTCCCTCAGCCATCTTAATCTCCCGGTGAAAACTCGTTGGTATCCTTGGTACACTGATAACCAGGTGGGAGGATGGACAGAGGTTTACAAGGGACTGACCTTTGCAACGGTACGAGGGGCAGGCCACGAGGTGCCTTTATTTGAACCAAAGCGTGCTCTCATTCTTTTCAGATCATTCTTGGCCGGGAAGGAACTCCCAAGATCTTATTAG

Protein Analysis

465

Amino Acids

52.84

Weight (kDa)

9.2

Isoelectric Point (pI)

41.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 37 - 457 6.1e-151 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1318
AccI GTMKAC 1 cut(s) 922
AccII CGCG 1 cut(s) 1178
AccIII TCCGGA 1 cut(s) 440
AciI CCGC 4 cut(s) 788, 898, 1146, 1176
AclWI GGATC 2 cut(s) 938, 1139
AcoI YGGCCR 2 cut(s) 390, 1368
AcsI RAATTY 1 cut(s) 1023
AcuI CTGAAG 1 cut(s) 270
AdeI CACNNNGTG 1 cut(s) 1318
AfaI GTAC 5 cut(s) 665, 833, 952, 1238, 1299
AfiI CCNNNNNNNGG 2 cut(s) 1128, 1182
AgeI ACCGGT 2 cut(s) 320, 884
AgsI TTSAA 3 cut(s) 75, 383, 1331
AjnI CCWGG 3 cut(s) 109, 1067, 1248
AloI GAACNNNNNNTCC 2 cut(s) 407, 439
AluBI AGCT 9 cut(s) 38, 284, 423, 458, 543, 568, 599, 723, 1043
AluI AGCT 9 cut(s) 38, 284, 423, 458, 543, 568, 599, 723, 1043
Alw21I GWGCWC 1 cut(s) 1345
Alw26I GTCTC 2 cut(s) 171, 513
AlwI GGATC 2 cut(s) 938, 1139
Aor13HI TCCGGA 1 cut(s) 440
AoxI GGCC 4 cut(s) 112, 390, 1309, 1368
ApeKI GCWGC 3 cut(s) 261, 860, 1115
ApoI RAATTY 1 cut(s) 1023
AseI ATTAAT 1 cut(s) 618
AsiGI ACCGGT 2 cut(s) 320, 884
AspS9I GGNCC 2 cut(s) 254, 299
AsuC2I CCSGG 4 cut(s) 258, 550, 1211, 1372
AsuHPI GGTGA 5 cut(s) 378, 548, 830, 1160, 1225
AvaII GGWCC 2 cut(s) 254, 299
BaeGI GKGCMC 1 cut(s) 181
BanI GGYRCC 1 cut(s) 1318
BauI CACGAG 1 cut(s) 1313
Bbv12I GWGCWC 1 cut(s) 1345
BbvCI CCTCAGC 2 cut(s) 564, 1193
BbvI GCAGC 3 cut(s) 248, 847, 1127
BccI CCATC 3 cut(s) 67, 1206, 1254
BciT130I CCWGG 3 cut(s) 111, 1069, 1250
BciVI GTATCC 1 cut(s) 1239
BclI TGATCA 2 cut(s) 826, 1059
BcnI CCSGG 4 cut(s) 258, 550, 1211, 1372
BcoDI GTCTC 2 cut(s) 171, 513
BfuI GTATCC 1 cut(s) 1239
BglII AGATCT 1 cut(s) 1388
BisI GCNGC 3 cut(s) 262, 861, 1116
BlsI GCNGC 3 cut(s) 263, 862, 1117
Bme1390I CCNGG 7 cut(s) 111, 258, 550, 1069, 1211, 1250, 1372
Bme18I GGWCC 2 cut(s) 254, 299
BmgT120I GGNCC 2 cut(s) 254, 299
BmiI GGNNCC 3 cut(s) 325, 1167, 1320
BmrFI CCNGG 7 cut(s) 111, 258, 550, 1069, 1211, 1250, 1372
BplI GAGNNNNNCTC 2 cut(s) 487, 519
Bpu10I CCTNAGC 2 cut(s) 564, 1193
BpuEI CTTGAG 1 cut(s) 444
BpuMI CCSGG 4 cut(s) 258, 550, 1211, 1372
BsaJI CCNNGG 1 cut(s) 1232
BsaWI WCCGGW 4 cut(s) 320, 440, 884, 1121
BsaXI ACNNNNNCTCC 2 cut(s) 407, 437
Bsc4I CCNNNNNNNGG 2 cut(s) 1128, 1182
Bse118I RCCGGY 3 cut(s) 320, 388, 884
Bse1I ACTGG 4 cut(s) 163, 695, 1024, 1169
BseAI TCCGGA 1 cut(s) 440
BseBI CCWGG 3 cut(s) 111, 1069, 1250
BseDI CCNNGG 1 cut(s) 1232
BseGI GGATG 2 cut(s) 906, 1265
BseLI CCNNNNNNNGG 2 cut(s) 1128, 1182
BseMII CTCAG 4 cut(s) 156, 189, 578, 1207
BseNI ACTGG 4 cut(s) 163, 695, 1024, 1169
BseSI GKGCMC 1 cut(s) 181
BseX3I CGGCCG 1 cut(s) 390
BseXI GCAGC 3 cut(s) 248, 847, 1127
Bsh1236I CGCG 1 cut(s) 1178
Bsh1285I CGRYCG 1 cut(s) 393
BshFI GGCC 4 cut(s) 114, 392, 1311, 1370
BshNI GGYRCC 1 cut(s) 1318
BshTI ACCGGT 2 cut(s) 320, 884
BsiEI CGRYCG 1 cut(s) 393
BsiHKAI GWGCWC 1 cut(s) 1345
BslFI GGGAC 2 cut(s) 969, 1293
BslI CCNNNNNNNGG 2 cut(s) 1128, 1182
BsmAI GTCTC 2 cut(s) 171, 513
BsmFI GGGAC 2 cut(s) 969, 1293
BsmI GAATGC 1 cut(s) 128
BsnI GGCC 4 cut(s) 114, 392, 1311, 1370
Bsp1286I GDGCHC 2 cut(s) 181, 1345
Bsp13I TCCGGA 1 cut(s) 440
Bsp143I GATC 7 cut(s) 427, 826, 943, 1059, 1131, 1358, 1388
BspACI CCGC 4 cut(s) 788, 898, 1146, 1176
BspANI GGCC 4 cut(s) 114, 392, 1311, 1370
BspCNI CTCAG 4 cut(s) 155, 190, 577, 1206
BspEI TCCGGA 1 cut(s) 440
BspFNI CGCG 1 cut(s) 1178
BspLI GGNNCC 3 cut(s) 325, 1167, 1320
BspPI GGATC 2 cut(s) 938, 1139
BspT107I GGYRCC 1 cut(s) 1318
BsrFI RCCGGY 3 cut(s) 320, 388, 884
BsrI ACTGG 4 cut(s) 163, 695, 1024, 1169
BssAI RCCGGY 3 cut(s) 320, 388, 884
BssECI CCNNGG 1 cut(s) 1232
BssMI GATC 7 cut(s) 427, 826, 943, 1059, 1131, 1358, 1388
BssSI CACGAG 1 cut(s) 1313
BssT1I CCWWGG 1 cut(s) 1232
Bst2BI CACGAG 1 cut(s) 1313
Bst2UI CCWGG 3 cut(s) 111, 1069, 1250
Bst4CI ACNGT 8 cut(s) 303, 671, 682, 757, 927, 983, 1185, 1297
Bst6I CTCTTC 1 cut(s) 188
BstC8I GCNNGC 5 cut(s) 570, 1008, 1045, 1309, 1341
BstDEI CTNAG 4 cut(s) 142, 198, 564, 1193
BstF5I GGATG 2 cut(s) 906, 1265
BstFNI CGCG 1 cut(s) 1178
BstKTI GATC 7 cut(s) 430, 829, 946, 1062, 1134, 1361, 1391
BstMAI GTCTC 2 cut(s) 171, 513
BstMBI GATC 7 cut(s) 427, 826, 943, 1059, 1131, 1358, 1388
BstMCI CGRYCG 1 cut(s) 393
BstMWI GCNNNNNNNGC 2 cut(s) 281, 1007
BstNI CCWGG 3 cut(s) 111, 1069, 1250
BstSCI CCNGG 7 cut(s) 109, 256, 548, 1067, 1209, 1248, 1370
BstSLI GKGCMC 1 cut(s) 181
BstUI CGCG 1 cut(s) 1178
BstV1I GCAGC 3 cut(s) 248, 847, 1127
BstX2I RGATCY 2 cut(s) 1131, 1388
BstXI CCANNNNNNTGG 2 cut(s) 170, 815
BstYI RGATCY 2 cut(s) 1131, 1388
BstZI CGGCCG 1 cut(s) 390
BsuI GTATCC 1 cut(s) 1239
BsuRI GGCC 4 cut(s) 114, 392, 1311, 1370
BtsCI GGATG 2 cut(s) 906, 1265
BtsI GCAGTG 2 cut(s) 654, 1054
BtsIMutI CAGTG 4 cut(s) 654, 1054, 1176, 1239
Cac8I GCNNGC 5 cut(s) 570, 1008, 1045, 1309, 1341
Cfr10I RCCGGY 3 cut(s) 320, 388, 884
Cfr13I GGNCC 2 cut(s) 254, 299
CseI GACGC 2 cut(s) 371, 1107
CsiI ACCWGGT 1 cut(s) 1248
Csp6I GTAC 5 cut(s) 664, 832, 951, 1237, 1298
CspAI ACCGGT 2 cut(s) 320, 884
CspCI CAANNNNNGTGG 2 cut(s) 837, 872
CviAII CATG 4 cut(s) 170, 809, 1003, 1090
CviQI GTAC 5 cut(s) 664, 832, 951, 1237, 1298
DdeI CTNAG 4 cut(s) 142, 198, 564, 1193
DpnI GATC 7 cut(s) 429, 828, 945, 1061, 1133, 1360, 1390
DpnII GATC 7 cut(s) 427, 826, 943, 1059, 1131, 1358, 1388
DraIII CACNNNGTG 1 cut(s) 1318
EaeI YGGCCR 2 cut(s) 390, 1368
EagI CGGCCG 1 cut(s) 390
Eam1104I CTCTTC 1 cut(s) 188
EarI CTCTTC 1 cut(s) 188
EclXI CGGCCG 1 cut(s) 390
Eco130I CCWWGG 1 cut(s) 1232
Eco47I GGWCC 2 cut(s) 254, 299
Eco52I CGGCCG 1 cut(s) 390
Eco57I CTGAAG 1 cut(s) 270
EcoRI GAATTC 1 cut(s) 1023
EcoRII CCWGG 3 cut(s) 109, 1067, 1248
EcoT14I CCWWGG 1 cut(s) 1232
ErhI CCWWGG 1 cut(s) 1232
FaeI CATG 4 cut(s) 173, 812, 1006, 1093
FaqI GGGAC 2 cut(s) 969, 1293
FatI CATG 4 cut(s) 169, 808, 1002, 1089
FbaI TGATCA 2 cut(s) 826, 1059
FblI GTMKAC 1 cut(s) 922
Fnu4HI GCNGC 3 cut(s) 262, 861, 1116
FokI GGATG 2 cut(s) 913, 1272
Fsp4HI GCNGC 3 cut(s) 262, 861, 1116
GluI GCNGC 3 cut(s) 262, 861, 1116
HaeIII GGCC 4 cut(s) 114, 392, 1311, 1370
HgaI GACGC 2 cut(s) 371, 1107
Hin1II CATG 4 cut(s) 173, 812, 1006, 1093
HincII GTYRAC 2 cut(s) 160, 793
HindII GTYRAC 2 cut(s) 160, 793
HindIII AAGCTT 1 cut(s) 597
HinfI GANTC 8 cut(s) 96, 200, 383, 437, 630, 697, 1076, 1157
HpaI GTTAAC 2 cut(s) 160, 793
HphI GGTGA 5 cut(s) 378, 548, 830, 1160, 1225
Hpy166II GTNNAC 6 cut(s) 160, 696, 793, 923, 1239, 1273
Hpy188I TCNGA 8 cut(s) 289, 427, 715, 772, 996, 1059, 1081, 1358
Hpy188III TCNNGA 8 cut(s) 75, 380, 441, 461, 495, 986, 1063, 1135
Hpy8I GTNNAC 6 cut(s) 160, 696, 793, 923, 1239, 1273
Hpy99I CGWCG 2 cut(s) 271, 776
HpyAV CCTTC 6 cut(s) 35, 82, 222, 242, 380, 1369
HpyCH4III ACNGT 8 cut(s) 303, 671, 682, 757, 927, 983, 1185, 1297
HpyCH4IV ACGT 1 cut(s) 851
HpyCH4V TGCA 7 cut(s) 647, 747, 965, 1006, 1047, 1115, 1292
HpyF10VI GCNNNNNNNGC 2 cut(s) 281, 1007
HpyF3I CTNAG 4 cut(s) 142, 198, 564, 1193
HpySE526I ACGT 1 cut(s) 851
Hsp92II CATG 4 cut(s) 173, 812, 1006, 1093
Kpn2I TCCGGA 1 cut(s) 440
Ksp22I TGATCA 2 cut(s) 826, 1059
KspAI GTTAAC 2 cut(s) 160, 793
Kzo9I GATC 7 cut(s) 427, 826, 943, 1059, 1131, 1358, 1388
LmnI GCTCC 2 cut(s) 281, 428
Lsp1109I GCAGC 3 cut(s) 248, 847, 1127
MabI ACCWGGT 1 cut(s) 1248
MaeII ACGT 1 cut(s) 851
MaeIII GTNAC 5 cut(s) 649, 682, 818, 1015, 1171
MalI GATC 7 cut(s) 429, 828, 945, 1061, 1133, 1360, 1390
MboI GATC 7 cut(s) 427, 826, 943, 1059, 1131, 1358, 1388
MboII GAAGA 8 cut(s) 20, 63, 175, 198, 227, 883, 886, 916
MflI RGATCY 2 cut(s) 1131, 1388
MhlI GDGCHC 2 cut(s) 181, 1345
MluCI AATT 4 cut(s) 294, 705, 748, 1023
MlyI GAGTC 4 cut(s) 209, 431, 691, 1151
MmeI TCCRAC 3 cut(s) 379, 738, 795
MroI TCCGGA 1 cut(s) 440
MseI TTAA 6 cut(s) 159, 432, 618, 792, 978, 1203
MslI CAYNNNNRTG 2 cut(s) 174, 1011
MspA1I CMGCKG 1 cut(s) 1146
MspR9I CCNGG 7 cut(s) 111, 258, 550, 1069, 1211, 1250, 1372
Mva1269I GAATGC 1 cut(s) 128
MvaI CCWGG 3 cut(s) 111, 1069, 1250
MvnI CGCG 1 cut(s) 1178
MwoI GCNNNNNNNGC 2 cut(s) 281, 1007
NciI CCSGG 4 cut(s) 258, 550, 1211, 1372
NdeII GATC 7 cut(s) 427, 826, 943, 1059, 1131, 1358, 1388
NlaIII CATG 4 cut(s) 173, 812, 1006, 1093
NlaIV GGNNCC 3 cut(s) 325, 1167, 1320
NmuCI GTSAC 3 cut(s) 649, 818, 1171
PctI GAATGC 1 cut(s) 128
PfeI GAWTC 4 cut(s) 96, 383, 630, 1076
PinAI ACCGGT 2 cut(s) 320, 884
PkrI GCNGC 3 cut(s) 263, 862, 1117
PleI GAGTC 4 cut(s) 208, 431, 691, 1151
PpsI GAGTC 4 cut(s) 208, 431, 691, 1151
PshBI ATTAAT 1 cut(s) 618
Psp6I CCWGG 3 cut(s) 109, 1067, 1248
PspGI CCWGG 3 cut(s) 109, 1067, 1248
PspN4I GGNNCC 3 cut(s) 325, 1167, 1320
PspPI GGNCC 2 cut(s) 254, 299
PsuI RGATCY 2 cut(s) 1131, 1388
RsaI GTAC 5 cut(s) 665, 833, 952, 1238, 1299
RsaNI GTAC 5 cut(s) 664, 832, 951, 1237, 1298
RseI CAYNNNNRTG 2 cut(s) 174, 1011
SaqAI TTAA 6 cut(s) 159, 432, 618, 792, 978, 1203
SatI GCNGC 3 cut(s) 262, 861, 1116
Sau3AI GATC 7 cut(s) 427, 826, 943, 1059, 1131, 1358, 1388
Sau96I GGNCC 2 cut(s) 254, 299
SchI GAGTC 4 cut(s) 209, 431, 691, 1151
ScrFI CCNGG 7 cut(s) 111, 258, 550, 1069, 1211, 1250, 1372
SduI GDGCHC 2 cut(s) 181, 1345
SexAI ACCWGGT 1 cut(s) 1248
SinI GGWCC 2 cut(s) 254, 299
SmiMI CAYNNNNRTG 2 cut(s) 174, 1011
SmlI CTYRAG 1 cut(s) 459
SmoI CTYRAG 1 cut(s) 459
Sse9I AATT 4 cut(s) 294, 705, 748, 1023
SsiI CCGC 4 cut(s) 788, 898, 1146, 1176
StyD4I CCNGG 7 cut(s) 109, 256, 548, 1067, 1209, 1248, 1370
StyI CCWWGG 1 cut(s) 1232
TaaI ACNGT 8 cut(s) 303, 671, 682, 757, 927, 983, 1185, 1297
TaiI ACGT 1 cut(s) 854
TaqI TCGA 3 cut(s) 47, 269, 494
TasI AATT 4 cut(s) 294, 705, 748, 1023
TatI WGTACW 1 cut(s) 831
TfiI GAWTC 4 cut(s) 96, 383, 630, 1076
Tru1I TTAA 6 cut(s) 159, 432, 618, 792, 978, 1203
Tru9I TTAA 6 cut(s) 159, 432, 618, 792, 978, 1203
TscAI CASTG 4 cut(s) 654, 1054, 1176, 1246
TseFI GTSAC 3 cut(s) 649, 818, 1171
TseI GCWGC 3 cut(s) 261, 860, 1115
Tsp45I GTSAC 3 cut(s) 649, 818, 1171
TspDTI ATGAA 4 cut(s) 7, 462, 818, 917
TspGWI ACGGA 2 cut(s) 668, 968
TspRI CASTG 4 cut(s) 654, 1054, 1176, 1246
VpaK11BI GGWCC 2 cut(s) 254, 299
VspI ATTAAT 1 cut(s) 618
XapI RAATTY 1 cut(s) 1023
XmiI GTMKAC 1 cut(s) 922
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.