AT2G26180

Short calmodulin-binding motif containing conserved Ile and Gln residues.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0013905
Physical Location & Seq
Reverse (-)
11143290 .. 11145103
1814 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G26180.1

Sequence Viewer

Length: 1251 bp
ATGGGTGCTTCAGGGAAATGGGTCAAGTCCATTATCGGTCTCAAGAAGCTAGAGAAGGATGAAATCGAAAAGGGTAATGGGAAAAACAAGAAATGGAAGCTATGGAGGACTACTTCAGTAGATTCATGGAAGGGTTTTCGAGGAAAACATCGGTCTGATTCAGACGGTGTTGATTCTTCTACTGTTTACTCTGCTGCTGTTGCTACTGTTCTTAGAGCTCCTCCTAAAGATTTCAAAGCTGTTAGAGAAGAATGGGCTGCTATTAGAATCCAAACCGCTTTTCGTGGATTCTTGGCGAGAAGAGCGTTGAGGGCATTGAAAGGGATAGTGAGGTTACAAGCTTTAGTGAGAGGAAGACAAGTTAGGAAACAAGCAGCTGTTACATTGAGATGCATGCAAGCTTTGGTGAGAGTACAAGCTCGTGTTAGAGCTCGTCGTGTGAGGATGACTGTTGAAGGACAAGCTGTTCAAAAGCTTTTAGATGAACATAGAACCAAATCTGATCTCTTGAAAGAAGTCGAGGAAGGGTGGTGTGATAGGAAAGGTACTGTGGATGATATTAAGTCAAAGTTGCAGCAGAGACAAGAAGGTGCTTTTAAGAGGGAACGTGCTTTGGCTTATGCTCTTGCTCAAAAGCAATGGAGGTCAACTACTAGCTCAAACCTTAAGACGAATAGTTCGATTTCGTATCTTAAAAGTCAAGAGTTTGATAAGAATAGTTGGGGATGGAGTTGGTTGGAGCGTTGGATGGCTGCTAGGCCATGGGAGACTAGACTTATGGACACTGTTGATACCGCTGCCACGCCTCCTCCTCTGCCTCATAAACATTTGAAATCACCGGAAACTGCGGATGTTGTTCAAGTTAGAAGAAACAATGTGACCACTAGAGTATCTGCAAAACCTCCTCCTCATATGCTGTCTTCAAGTCCTGGTTATGAGTTTAACGAGAGCTCAGGTTCATCCTCGATTTGTACTTCAACTACGCCTGTTTCTGGAAAAACTGGACTTGTTTCAGATAACTCTAGCAGTCAAGCAAAAAAGCACAAGCCAAGTTACATGAGCTTGACTGAATCGACAAAGGCTAAGCGAAGAACTAACCGCGGTCTCAGGCAATCTATGGATGAGTTTCAGTTTATGAAGAACTCTGGAATGTTTACAGGGGAATTGAAGACTAGTCCTTCCTCAGATCCTTTTGTTAGTTTCTCCAAACCACTCGGTGTTCCTACTCGATTCGAGAAGCCGAGAGGTTAA

Protein Analysis

416

Amino Acids

46.89

Weight (kDa)

10.49

Isoelectric Point (pI)

43.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013905)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G26180
fragaria_vesca FvH4_2g31650
malus_domestica MD08G1064300.v1.1 MD15G1057400.v1.1
prunus_persica Prupe.1G409900_v2.0.a1
pyrus_communis pycom08g05280
rosa_chinensis RchiOBHm_Chr6g0311171
rosa_laevigata RLG00000010430
rosa_multiflora Rmu_sc0008967.1_g000015 Rmu_sc0016962.1_g000004
rosa_roxburghii Rroxscaffold_7G00157940
rosa_rugosa Rorug06G0386000
rosa_samantha Rh6AG500100 Rh6BG510800 Rh6CG516500 Rh6DG503000
rosa_wichuraiana Rw6G043560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 1101
AciI CCGC 5 cut(s) 276, 795, 848, 1099, 1101
AclWI GGATC 1 cut(s) 1181
AcuI CTGAAG 1 cut(s) 99
AdeI CACNNNGTG 1 cut(s) 1217
AfaI GTAC 3 cut(s) 414, 547, 973
AfiI CCNNNNNNNGG 1 cut(s) 992
AflII CTTAAG 1 cut(s) 665
AhlI ACTAGT 1 cut(s) 1172
AjnI CCWGG 1 cut(s) 928
AjuI GAANNNNNNNTTGG 2 cut(s) 264, 296
AloI GAACNNNNNNTCC 2 cut(s) 450, 482
Alw21I GWGCWC 3 cut(s) 220, 433, 953
Alw26I GTCTC 4 cut(s) 44, 574, 761, 1109
AlwI GGATC 1 cut(s) 1181
AoxI GGCC 1 cut(s) 758
ApeKI GCWGC 6 cut(s) 194, 257, 374, 574, 752, 797
ArsI GACNNNNNNTTYG 2 cut(s) 661, 693
AsuHPI GGTGA 2 cut(s) 418, 828
BaeI ACNNNNGTAYC 2 cut(s) 873, 906
BanII GRGCYC 3 cut(s) 220, 433, 953
BauI CACGAG 1 cut(s) 420
BbsI GAAGAC 3 cut(s) 361, 912, 1175
Bbv12I GWGCWC 3 cut(s) 220, 433, 953
BbvI GCAGC 6 cut(s) 181, 244, 386, 586, 739, 784
BccI CCATC 2 cut(s) 720, 742
BciT130I CCWGG 1 cut(s) 930
BcoDI GTCTC 4 cut(s) 44, 574, 761, 1109
BcuI ACTAGT 1 cut(s) 1172
BfaI CTAG 7 cut(s) 50, 654, 756, 771, 885, 1023, 1173
BfrI CTTAAG 1 cut(s) 665
BisI GCNGC 6 cut(s) 195, 258, 375, 575, 753, 798
BlpI GCTNAGC 1 cut(s) 1083
BlsI GCNGC 6 cut(s) 196, 259, 376, 576, 754, 799
Bme1390I CCNGG 1 cut(s) 930
BmrFI CCNGG 1 cut(s) 930
BmsI GCATC 1 cut(s) 380
BpiI GAAGAC 3 cut(s) 361, 912, 1175
Bpu10I CCTNAGC 1 cut(s) 952
Bpu1102I GCTNAGC 1 cut(s) 1083
BpuEI CTTGAG 1 cut(s) 26
BsaI GGTCTC 2 cut(s) 44, 1109
BsaJI CCNNGG 2 cut(s) 761, 1099
BsaWI WCCGGW 1 cut(s) 838
BsaXI ACNNNNNCTCC 2 cut(s) 793, 823
Bsc4I CCNNNNNNNGG 1 cut(s) 992
Bse1I ACTGG 1 cut(s) 1006
Bse3DI GCAATG 1 cut(s) 644
BseBI CCWGG 1 cut(s) 930
BseDI CCNNGG 2 cut(s) 761, 1099
BseGI GGATG 8 cut(s) 64, 450, 559, 731, 753, 856, 959, 1126
BseLI CCNNNNNNNGG 1 cut(s) 992
BseMI GCAATG 1 cut(s) 644
BseMII CTCAG 3 cut(s) 966, 1120, 1197
BseNI ACTGG 1 cut(s) 1006
BseRI GAGGAG 5 cut(s) 210, 798, 801, 894, 897
BseXI GCAGC 6 cut(s) 181, 244, 386, 586, 739, 784
Bsh1236I CGCG 1 cut(s) 1101
BshFI GGCC 1 cut(s) 760
BsiHKAI GWGCWC 3 cut(s) 220, 433, 953
BsiSI CCGG 1 cut(s) 839
BslI CCNNNNNNNGG 1 cut(s) 992
BsmAI GTCTC 4 cut(s) 44, 574, 761, 1109
BsnI GGCC 1 cut(s) 760
Bso31I GGTCTC 2 cut(s) 44, 1109
Bsp1286I GDGCHC 3 cut(s) 220, 433, 953
Bsp143I GATC 2 cut(s) 502, 1186
Bsp1720I GCTNAGC 1 cut(s) 1083
Bsp19I CCATGG 1 cut(s) 761
BspACI CCGC 5 cut(s) 276, 795, 848, 1099, 1101
BspANI GGCC 1 cut(s) 760
BspCNI CTCAG 3 cut(s) 965, 1119, 1196
BspFNI CGCG 1 cut(s) 1101
BspPI GGATC 1 cut(s) 1181
BspQI GCTCTTC 1 cut(s) 295
BspTI CTTAAG 1 cut(s) 665
BspTNI GGTCTC 2 cut(s) 44, 1109
BsrDI GCAATG 1 cut(s) 644
BsrI ACTGG 1 cut(s) 1006
BssECI CCNNGG 2 cut(s) 761, 1099
BssMI GATC 2 cut(s) 502, 1186
BssSI CACGAG 1 cut(s) 420
BssT1I CCWWGG 1 cut(s) 761
Bst2BI CACGAG 1 cut(s) 420
Bst2UI CCWGG 1 cut(s) 930
Bst4CI ACNGT 6 cut(s) 167, 184, 208, 451, 550, 787
Bst6I CTCTTC 1 cut(s) 295
BstAFI CTTAAG 1 cut(s) 665
BstC8I GCNNGC 2 cut(s) 395, 399
BstDEI CTNAG 5 cut(s) 212, 952, 1083, 1106, 1183
BstDSI CCRYGG 2 cut(s) 761, 1099
BstF5I GGATG 8 cut(s) 64, 450, 559, 731, 753, 856, 959, 1126
BstFNI CGCG 1 cut(s) 1101
BstKTI GATC 2 cut(s) 505, 1189
BstMAI GTCTC 4 cut(s) 44, 574, 761, 1109
BstMBI GATC 2 cut(s) 502, 1186
BstMWI GCNNNNNNNGC 3 cut(s) 200, 302, 311
BstNI CCWGG 1 cut(s) 930
BstNSI RCATGY 1 cut(s) 397
BstSCI CCNGG 1 cut(s) 928
BstUI CGCG 1 cut(s) 1101
BstV1I GCAGC 6 cut(s) 181, 244, 386, 586, 739, 784
BstV2I GAAGAC 3 cut(s) 361, 912, 1175
BstX2I RGATCY 1 cut(s) 1186
BstYI RGATCY 1 cut(s) 1186
BsuRI GGCC 1 cut(s) 760
BtgI CCRYGG 2 cut(s) 761, 1099
BtsCI GGATG 8 cut(s) 64, 450, 559, 731, 753, 856, 959, 1126
BtsIMutI CAGTG 1 cut(s) 783
Cac8I GCNNGC 2 cut(s) 395, 399
Cfr42I CCGCGG 1 cut(s) 1102
Csp6I GTAC 3 cut(s) 413, 546, 972
CviAII CATG 4 cut(s) 126, 394, 762, 1057
CviQI GTAC 3 cut(s) 413, 546, 972
DdeI CTNAG 5 cut(s) 212, 952, 1083, 1106, 1183
DpnI GATC 2 cut(s) 504, 1188
DpnII GATC 2 cut(s) 502, 1186
DraIII CACNNNGTG 1 cut(s) 1217
Eam1104I CTCTTC 1 cut(s) 295
EarI CTCTTC 1 cut(s) 295
Ecl136II GAGCTC 3 cut(s) 218, 431, 951
Eco130I CCWWGG 1 cut(s) 761
Eco24I GRGCYC 3 cut(s) 220, 433, 953
Eco31I GGTCTC 2 cut(s) 44, 1109
Eco53kI GAGCTC 3 cut(s) 218, 431, 951
Eco57I CTGAAG 1 cut(s) 99
EcoICRI GAGCTC 3 cut(s) 218, 431, 951
EcoRII CCWGG 1 cut(s) 928
EcoT14I CCWWGG 1 cut(s) 761
EcoT22I ATGCAT 1 cut(s) 395
EcoT38I GRGCYC 3 cut(s) 220, 433, 953
ErhI CCWWGG 1 cut(s) 761
FaeI CATG 4 cut(s) 129, 397, 765, 1060
FatI CATG 4 cut(s) 125, 393, 761, 1056
FauNDI CATATG 1 cut(s) 912
Fnu4HI GCNGC 6 cut(s) 195, 258, 375, 575, 753, 798
FokI GGATG 8 cut(s) 71, 457, 566, 738, 760, 863, 946, 1133
FriOI GRGCYC 3 cut(s) 220, 433, 953
Fsp4HI GCNGC 6 cut(s) 195, 258, 375, 575, 753, 798
FspBI CTAG 7 cut(s) 50, 654, 756, 771, 885, 1023, 1173
GluI GCNGC 6 cut(s) 195, 258, 375, 575, 753, 798
HaeIII GGCC 1 cut(s) 760
HapII CCGG 1 cut(s) 839
Hin1II CATG 4 cut(s) 129, 397, 765, 1060
HincII GTYRAC 1 cut(s) 648
HindII GTYRAC 1 cut(s) 648
HindIII AAGCTT 3 cut(s) 339, 399, 473
HinfI GANTC 7 cut(s) 122, 158, 173, 267, 288, 1070, 1230
HpaII CCGG 1 cut(s) 839
HphI GGTGA 2 cut(s) 418, 828
Hpy166II GTNNAC 3 cut(s) 187, 648, 1155
Hpy188I TCNGA 5 cut(s) 157, 163, 502, 1015, 1186
Hpy188III TCNNGA 6 cut(s) 43, 508, 701, 993, 1146, 1234
Hpy8I GTNNAC 3 cut(s) 187, 648, 1155
Hpy99I CGWCG 1 cut(s) 438
HpyAV CCTTC 6 cut(s) 49, 124, 449, 518, 581, 1188
HpyCH4III ACNGT 6 cut(s) 167, 184, 208, 451, 550, 787
HpyCH4IV ACGT 1 cut(s) 607
HpyCH4V TGCA 4 cut(s) 393, 397, 574, 896
HpyF10VI GCNNNNNNNGC 3 cut(s) 200, 302, 311
HpyF3I CTNAG 5 cut(s) 212, 952, 1083, 1106, 1183
HpySE526I ACGT 1 cut(s) 607
Hsp92II CATG 4 cut(s) 129, 397, 765, 1060
KspI CCGCGG 1 cut(s) 1102
Kzo9I GATC 2 cut(s) 502, 1186
LguI GCTCTTC 1 cut(s) 295
LmnI GCTCC 2 cut(s) 223, 739
Lsp1109I GCAGC 6 cut(s) 181, 244, 386, 586, 739, 784
LweI GCATC 1 cut(s) 380
MaeI CTAG 7 cut(s) 50, 654, 756, 771, 885, 1023, 1173
MaeII ACGT 1 cut(s) 607
MaeIII GTNAC 4 cut(s) 333, 379, 877, 1052
MalI GATC 2 cut(s) 504, 1188
MboI GATC 2 cut(s) 502, 1186
MboII GAAGA 9 cut(s) 168, 260, 312, 366, 879, 912, 1101, 1150, 1180
MflI RGATCY 1 cut(s) 1186
MhlI GDGCHC 3 cut(s) 220, 433, 953
MluCI AATT 1 cut(s) 1163
MmeI TCCRAC 2 cut(s) 717, 725
Mph1103I ATGCAT 1 cut(s) 395
MseI TTAA 6 cut(s) 561, 597, 666, 693, 942, 1249
MslI CAYNNNNRTG 1 cut(s) 388
MspA1I CMGCKG 3 cut(s) 377, 797, 1101
MspCI CTTAAG 1 cut(s) 665
MspI CCGG 1 cut(s) 839
MspR9I CCNGG 1 cut(s) 930
MvaI CCWGG 1 cut(s) 930
MvnI CGCG 1 cut(s) 1101
MwoI GCNNNNNNNGC 3 cut(s) 200, 302, 311
NcoI CCATGG 1 cut(s) 761
NdeI CATATG 1 cut(s) 912
NdeII GATC 2 cut(s) 502, 1186
NlaIII CATG 4 cut(s) 129, 397, 765, 1060
NmuCI GTSAC 1 cut(s) 877
NsiI ATGCAT 1 cut(s) 395
NspI RCATGY 1 cut(s) 397
PaeI GCATGC 1 cut(s) 397
PciSI GCTCTTC 1 cut(s) 295
PcsI WCGNNNNNNNCGW 1 cut(s) 677
PfeI GAWTC 7 cut(s) 122, 158, 173, 267, 288, 1070, 1230
PkrI GCNGC 6 cut(s) 196, 259, 376, 576, 754, 799
Psp124BI GAGCTC 3 cut(s) 220, 433, 953
Psp6I CCWGG 1 cut(s) 928
PspGI CCWGG 1 cut(s) 928
PsuI RGATCY 1 cut(s) 1186
PvuII CAGCTG 1 cut(s) 377
RsaI GTAC 3 cut(s) 414, 547, 973
RsaNI GTAC 3 cut(s) 413, 546, 972
RseI CAYNNNNRTG 1 cut(s) 388
SacI GAGCTC 3 cut(s) 220, 433, 953
SacII CCGCGG 1 cut(s) 1102
SapI GCTCTTC 1 cut(s) 295
SaqAI TTAA 6 cut(s) 561, 597, 666, 693, 942, 1249
SatI GCNGC 6 cut(s) 195, 258, 375, 575, 753, 798
Sau3AI GATC 2 cut(s) 502, 1186
ScrFI CCNGG 1 cut(s) 930
SduI GDGCHC 3 cut(s) 220, 433, 953
SfaNI GCATC 1 cut(s) 380
Sfr303I CCGCGG 1 cut(s) 1102
SgrBI CCGCGG 1 cut(s) 1102
SmiMI CAYNNNNRTG 1 cut(s) 388
SmlI CTYRAG 2 cut(s) 41, 665
SmoI CTYRAG 2 cut(s) 41, 665
SpeI ACTAGT 1 cut(s) 1172
SphI GCATGC 1 cut(s) 397
Sse9I AATT 1 cut(s) 1163
SsiI CCGC 5 cut(s) 276, 795, 848, 1099, 1101
SspMI CTAG 7 cut(s) 50, 654, 756, 771, 885, 1023, 1173
SstI GAGCTC 3 cut(s) 220, 433, 953
StyD4I CCNGG 1 cut(s) 928
StyI CCWWGG 1 cut(s) 761
TaaI ACNGT 6 cut(s) 167, 184, 208, 451, 550, 787
TaiI ACGT 1 cut(s) 610
TaqI TCGA 8 cut(s) 66, 139, 519, 680, 965, 1073, 1228, 1233
TaqII GACCGA 2 cut(s) 26, 141
TasI AATT 1 cut(s) 1163
TatI WGTACW 2 cut(s) 412, 971
TfiI GAWTC 7 cut(s) 122, 158, 173, 267, 288, 1070, 1230
Tru1I TTAA 6 cut(s) 561, 597, 666, 693, 942, 1249
Tru9I TTAA 6 cut(s) 561, 597, 666, 693, 942, 1249
TscAI CASTG 1 cut(s) 790
TseFI GTSAC 1 cut(s) 877
TseI GCWGC 6 cut(s) 194, 257, 374, 574, 752, 797
Tsp45I GTSAC 1 cut(s) 877
TspDTI ATGAA 5 cut(s) 75, 114, 498, 948, 1151
TspRI CASTG 1 cut(s) 790
Vha464I CTTAAG 1 cut(s) 665
XceI RCATGY 1 cut(s) 397
XspI CTAG 7 cut(s) 50, 654, 756, 771, 885, 1023, 1173
Zsp2I ATGCAT 1 cut(s) 395
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.