Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0004709

Physical Location & Seq

Genomic Coordinates Forward (+)

53140107 .. 53143775

Gene Structure 3669 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0386000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2004 bp

ATGGAAGAAGTTTGTCTCAATAGTGAGCCAGTGTTTGATGAAGGCGATGAGTATGACTTGGAGGGAGGGCATGATGTTGGAATTGGGGAAACACAAAGTAAACAGGTCCCCCCACAACCTACTGTCGGTTTGGAGTTTGACTCTTTTGACGAAGCCTATGATTTCTACAATGTCTATGGTAAAGAACAGGGATTTGGCATCAGAGTGAGCAATTCATGGTTCAGGTCAAAGAGAAAAGAGCGGTATAGAGCAAAATTAAGTTGCAGCAGTGCAGGTTTCAAGAAAAAGAGTGAAGCCAACAATCCAAGACCTGAGACGAGAACTGGTTGTCCTGCAATGATAGTTATCAAGCTGGTGGACTCCCAAAGGTGGAGAATAGTTGAATTAGAGCTTCAACACAACCATCAGGTGAGTCCACAGATCAAAAGGTTTTACAAGTCGCATAAGAAAATGATCATTGCTGCCAAAAATGCACAACAACAGCCAAATCCTGTTACAGAAGTTCATACTATCAAGCTGTATCGAACACCTGTTATGGATGTTGGGTGCAATGGATGCTCAACTTTAAGTGAAACTGAAGGTTTAAATCCTATTGATCACTCTAAGCACTTGCAACTTAGAGAAGGAGATGCTCATGCAGTTTACAACTACTTTTGTCGAATGAAATTGACAAATCCTAATTTTTATTATTTGATGGATCTAGATGATGATGGACGTCTGAGGAATGTGTTTTGGGCTGATGCCAGGTCCAGGGCTGCGTACGGCTACTTCTGTGACACTGTAGCCATAGACACAACGTGCTTGGCAAACAAATATGAACTCCCCCTGATTTCATTTGTTGGTGTAAACCATCATGGACAATCCGTGCTGTTGGGCTGTGGGTTCCTTGGGATTGAGTCAGTGGATTGTTATGTTTGGATGCTCCGTGCATGGCTGAAATGCATGCTAGGGCGCCCTCCACAGGTTTTCATTACTGACCAATGCAAACCATTGCAAATTGCAGTGTCTGAGGTGATCCCAGAGGCTCGCCATTGCTATTGTTTGTCATATATCATGCAGAGAGTTCCGGAGAAGTTGGGAGGACTGAAGGGATATGAAGCAATCAAAAGACACTTGCAGAAATCAATCTATGATTCCTTGAAAATAGCTGAGTTTGAAACTTCCTGGGCTGAAATGATCAAGCGGCATGAACTGGGGAATAATAAATGGCTTCACACATTGTATGAGGATCGGCAGAACTGGGTTCCAGTTTATTTAAAAGACACATTTTTTGCGGGAATGATCCCTATCCGCGAAAATGAGAGCTTGCCTGCATTTTTTGATGGTTATGTACATAAACATACGTCTTTCAAGGAGTTCGTCGATAAGTATGACCTAGCTCTACATAGGAAGCGCATGAAAGAGGTGGTGGCGGATCTGGAGTCAAGAACGTCGAGCTTTGAATTGAAAACACGATGCAACTTTGAAGTGCAACTATGTAAAGTGTACACCAAGGATATTTTCAAGAGGTTCCAGTTGGAGGTTGAGGGAATGTACTCCTGCTTCAATACAAGGCAGGTCAATGTCAATGGGCCTATAATAACCTACATAGTTAAAGAACGAGTTGGAGTTGAAGGAAATGAGAAGGAAGTCAGATGCTATGAGGTTTTGTATGAGACAACACAAGTGGATATCCGATGTATCTGCAGTTTGTTCAACTACAAAGGGTATCTGTGCAGGCATGCATTAAACGTTCTAAATTACAATGGTGTGGAAGTAATCCCTTCCCGATACATTTTGCCACGGTGGAGTAAAGATTTCAAGCGCAGGTATCTTCTGCATCAAGGATCCAGTAATATTGATGTGTATGACCCAGCATACTGGCGTAATCATCTTTATAATCTCGCCCTTCCATTTGCGGAAGAAGGGGCACAATCTGAGGAACATTATAAGACGACGTTGCAAGCATTGGAGGAGTTGTTGAACAAGTTTCATCTTGTAGAGGATACCCTCAATGTAACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005856 GO:0005874 GO:0008017 GO:0008092 GO:0015630 GO:0015631 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0099080 GO:0099081 GO:0099512 GO:0099513

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4005 IQ

Protein Analysis

667

Amino Acids

77.52

Weight (kDa)

6.89

Isoelectric Point (pI)

40.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAR1	PF03101	54 - 138	1.1e-23	FAR1 DNA-binding domain
MULE	PF10551	261 - 353	2.9e-24	MULE transposase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004709)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26170 AT2G26170
fragaria_vesca	FvH4_2g31660 FvH4_2g31680 FvH4_2g31680 FvH4_2g31680 FvH4_2g31680 FvH4_2g31680
malus_domestica	MD02G1142400.v1.1 MD08G1064200.v1.1 MD15G1057500.v1.1 MD15G1057600.v1.1
prunus_persica	Prupe.1G410100_v2.0.a1 Prupe.1G410100_v2.0.a1 Prupe.1G410300_v2.0.a1 Prupe.1G410300_v2.0.a1 Prupe.1G410300_v2.0.a1
pyrus_communis	pycom08g05270 pycom15g05410 pycom15g05420 pycom15g22400
rosa_chinensis	RchiOBHm_Chr6g0311161
rosa_laevigata	RLG00000010431
rosa_multiflora	Rmu_sc0008967.1_g000014 Rmu_sc0016962.1_g000003
rosa_roxburghii	Rroxscaffold_7G00157950
rosa_rugosa	Rorug06G0386000
rosa_samantha	Rh6BG510700 Rh6CG516400 Rh6DG502900
rosa_wichuraiana	Rw6G043550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1878, 1929
AatII	GACGTC	1 cut(s)	718
Acc36I	ACCTGC	3 cut(s)	263, 1546, 1797
AccB1I	GGYRCC	1 cut(s)	951
AccBSI	CCGCTC	1 cut(s)	241
AccII	CGCG	1 cut(s)	1293
AccIII	TCCGGA	1 cut(s)	1066
AciI	CCGC	6 cut(s)	241, 1183, 1274, 1291, 1412, 1898
AclI	AACGTT	1 cut(s)	1731
AclWI	GGATC	7 cut(s)	705, 1009, 1236, 1276, 1422, 1821, 1834
AcuI	CTGAAG	2 cut(s)	597, 1106
AcyI	GRCGYC	2 cut(s)	715, 952
AdeI	CACNNNGTG	1 cut(s)	798
AfaI	GTAC	4 cut(s)	761, 1332, 1487, 1535
AfiI	CCNNNNNNNGG	5 cut(s)	125, 369, 750, 961, 1519
AjnI	CCWGG	3 cut(s)	743, 749, 1163
AjuI	GAANNNNNNNTTGG	4 cut(s)	177, 209, 1484, 1516
AloI	GAACNNNNNNTCC	2 cut(s)	313, 345
AluBI	AGCT	7 cut(s)	352, 391, 517, 1148, 1305, 1379, 1437
AluI	AGCT	7 cut(s)	352, 391, 517, 1148, 1305, 1379, 1437
Alw26I	GTCTC	3 cut(s)	20, 308, 1649
AlwI	GGATC	7 cut(s)	705, 1009, 1236, 1276, 1422, 1821, 1834
AlwNI	CAGNNNCTG	1 cut(s)	1007
Aor13HI	TCCGGA	1 cut(s)	1066
AoxI	GGCC	1 cut(s)	1571
ApeKI	GCWGC	3 cut(s)	264, 461, 755
ArsI	GACNNNNNNTTYG	2 cut(s)	1253, 1285
AspLEI	GCGC	3 cut(s)	954, 1395, 1806
AspS9I	GGNCC	3 cut(s)	106, 747, 1571
AsuHPI	GGTGA	2 cut(s)	421, 1024
AvaII	GGWCC	2 cut(s)	106, 747
BaeGI	GKGCMC	1 cut(s)	1912
BamHI	GGATCC	1 cut(s)	1826
BanI	GGYRCC	1 cut(s)	951
BarI	GAAGNNNNNNTAC	4 cut(s)	752, 784, 1526, 1558
BbvI	GCAGC	3 cut(s)	276, 448, 742
BccI	CCATC	5 cut(s)	411, 688, 704, 858, 1316
BceAI	ACGGC	1 cut(s)	778
BcgI	CGANNNNNNTGC	2 cut(s)	1665, 1699
BciT130I	CCWGG	3 cut(s)	745, 751, 1165
BciVI	GTATCC	1 cut(s)	1978
BclI	TGATCA	3 cut(s)	453, 595, 1176
BcoDI	GTCTC	3 cut(s)	20, 308, 1649
BfaI	CTAG	3 cut(s)	701, 947, 1376
BfmI	CTRYAG	2 cut(s)	780, 1684
BfoI	RGCGCY	1 cut(s)	955
BfuAI	ACCTGC	3 cut(s)	263, 1546, 1797
BfuI	GTATCC	1 cut(s)	1978
BisI	GCNGC	4 cut(s)	265, 462, 756, 1184
BlsI	GCNGC	4 cut(s)	266, 463, 757, 1185
Bme1390I	CCNGG	3 cut(s)	745, 751, 1165
Bme18I	GGWCC	2 cut(s)	106, 747
BmgT120I	GGNCC	3 cut(s)	106, 747, 1571
BmiI	GGNNCC	6 cut(s)	108, 884, 953, 1245, 1511, 1828
BmrFI	CCNGG	3 cut(s)	745, 751, 1165
BmrI	ACTGGG	2 cut(s)	1202, 1249
BmsI	GCATC	8 cut(s)	207, 545, 619, 730, 909, 1445, 1625, 1828
BmuI	ACTGGG	2 cut(s)	1202, 1249
BplI	GAGNNNNNCTC	2 cut(s)	125, 157
BpmI	CTGGAG	1 cut(s)	1439
BsaBI	GATNNNNATC	2 cut(s)	344, 1286
BsaHI	GRCGYC	2 cut(s)	715, 952
BsaJI	CCNNGG	5 cut(s)	750, 886, 1164, 1491, 1781
BsaWI	WCCGGW	1 cut(s)	1066
BsaXI	ACNNNNNCTCC	2 cut(s)	1943, 1973
Bsc4I	CCNNNNNNNGG	5 cut(s)	125, 369, 750, 961, 1519
Bse1I	ACTGG	8 cut(s)	29, 328, 1197, 1244, 1247, 1513, 1830, 1865
Bse3DI	GCAATG	5 cut(s)	342, 456, 556, 989, 1030
Bse8I	GATNNNNATC	2 cut(s)	344, 1286
BseAI	TCCGGA	1 cut(s)	1066
BseBI	CCWGG	3 cut(s)	745, 751, 1165
BseDI	CCNNGG	5 cut(s)	750, 886, 1164, 1491, 1781
BseGI	GGATG	3 cut(s)	544, 560, 924
BseJI	GATNNNNATC	2 cut(s)	344, 1286
BseLI	CCNNNNNNNGG	5 cut(s)	125, 369, 750, 961, 1519
BseMI	GCAATG	5 cut(s)	342, 456, 556, 989, 1030
BseMII	CTCAG	5 cut(s)	303, 710, 999, 1140, 1908
BseNI	ACTGG	8 cut(s)	29, 328, 1197, 1244, 1247, 1513, 1830, 1865
BseRI	GAGGAG	1 cut(s)	1967
BseSI	GKGCMC	1 cut(s)	1912
BseXI	GCAGC	3 cut(s)	276, 448, 742
BseYI	CCCAGC	1 cut(s)	1852
BsgI	GTGCAG	2 cut(s)	291, 1735
Bsh1236I	CGCG	1 cut(s)	1293
BshFI	GGCC	1 cut(s)	1573
BshNI	GGYRCC	1 cut(s)	951
BsiSI	CCGG	1 cut(s)	1067
BsiWI	CGTACG	1 cut(s)	759
BslFI	GGGAC	1 cut(s)	92
BslI	CCNNNNNNNGG	5 cut(s)	125, 369, 750, 961, 1519
BsmAI	GTCTC	3 cut(s)	20, 308, 1649
BsmBI	CGTCTC	1 cut(s)	308
BsmFI	GGGAC	1 cut(s)	92
BsnI	GGCC	1 cut(s)	1573
Bsp1286I	GDGCHC	1 cut(s)	1912
Bsp13I	TCCGGA	1 cut(s)	1066
Bsp1407I	TGTACA	2 cut(s)	1330, 1485
BspACI	CCGC	6 cut(s)	241, 1183, 1274, 1291, 1412, 1898
BspANI	GGCC	1 cut(s)	1573
BspCNI	CTCAG	5 cut(s)	304, 711, 1000, 1141, 1909
BspEI	TCCGGA	1 cut(s)	1066
BspFNI	CGCG	1 cut(s)	1293
BspLI	GGNNCC	6 cut(s)	108, 884, 953, 1245, 1511, 1828
BspMAI	CTGCAG	1 cut(s)	1688
BspMI	ACCTGC	3 cut(s)	263, 1546, 1797
BspPI	GGATC	7 cut(s)	705, 1009, 1236, 1276, 1422, 1821, 1834
BspT107I	GGYRCC	1 cut(s)	951
BsrBI	CCGCTC	1 cut(s)	241
BsrDI	GCAATG	5 cut(s)	342, 456, 556, 989, 1030
BsrGI	TGTACA	2 cut(s)	1330, 1485
BsrI	ACTGG	8 cut(s)	29, 328, 1197, 1244, 1247, 1513, 1830, 1865
BssECI	CCNNGG	5 cut(s)	750, 886, 1164, 1491, 1781
BssNI	GRCGYC	2 cut(s)	715, 952
BssT1I	CCWWGG	2 cut(s)	886, 1491
Bst2UI	CCWGG	3 cut(s)	745, 751, 1165
Bst4CI	ACNGT	3 cut(s)	124, 781, 1785
BstACI	GRCGYC	2 cut(s)	715, 952
BstAPI	GCANNNNNTGC	1 cut(s)	555
BstAUI	TGTACA	2 cut(s)	1330, 1485
BstC8I	GCNNGC	7 cut(s)	944, 1027, 1307, 1311, 1718, 1722, 1944
BstDEI	CTNAG	7 cut(s)	312, 603, 617, 719, 1008, 1149, 1917
BstDSI	CCRYGG	1 cut(s)	1781
BstF5I	GGATG	3 cut(s)	544, 560, 924
BstFNI	CGCG	1 cut(s)	1293
BstH2I	RGCGCY	1 cut(s)	955
BstHHI	GCGC	3 cut(s)	954, 1395, 1806
BstMAI	GTCTC	3 cut(s)	20, 308, 1649
BstMWI	GCNNNNNNNGC	2 cut(s)	470, 555
BstNI	CCWGG	3 cut(s)	745, 751, 1165
BstNSI	RCATGY	2 cut(s)	946, 1724
BstSCI	CCNGG	3 cut(s)	743, 749, 1163
BstSFI	CTRYAG	2 cut(s)	780, 1684
BstSLI	GKGCMC	1 cut(s)	1912
BstUI	CGCG	1 cut(s)	1293
BstV1I	GCAGC	3 cut(s)	276, 448, 742
BstX2I	RGATCY	3 cut(s)	697, 1414, 1826
BstXI	CCANNNNNNTGG	1 cut(s)	1860
BstYI	RGATCY	3 cut(s)	697, 1414, 1826
BsuI	GTATCC	1 cut(s)	1978
BsuRI	GGCC	1 cut(s)	1573
BtgI	CCRYGG	1 cut(s)	1781
BtgZI	GCGATG	1 cut(s)	60
BtsCI	GGATG	3 cut(s)	544, 560, 924
BtsI	GCAGTG	2 cut(s)	274, 1008
BtsIMutI	CAGTG	5 cut(s)	36, 274, 777, 906, 1008
BveI	ACCTGC	3 cut(s)	263, 1546, 1797
Cac8I	GCNNGC	7 cut(s)	944, 1027, 1307, 1311, 1718, 1722, 1944
CaiI	CAGNNNCTG	1 cut(s)	1007
CfoI	GCGC	3 cut(s)	954, 1395, 1806
Cfr13I	GGNCC	3 cut(s)	106, 747, 1571
Csp6I	GTAC	4 cut(s)	760, 1331, 1486, 1534
CspCI	CAANNNNNGTGG	2 cut(s)	1647, 1682
CviQI	GTAC	4 cut(s)	760, 1331, 1486, 1534
DdeI	CTNAG	7 cut(s)	312, 603, 617, 719, 1008, 1149, 1917
DinI	GGCGCC	1 cut(s)	953
DraI	TTTAAA	2 cut(s)	585, 1257
DraIII	CACNNNGTG	1 cut(s)	798
EciI	GGCGGA	1 cut(s)	1427
Eco130I	CCWWGG	2 cut(s)	886, 1491
Eco32I	GATATC	1 cut(s)	1672
Eco47I	GGWCC	2 cut(s)	106, 747
Eco57I	CTGAAG	2 cut(s)	597, 1106
EcoO109I	RGGNCCY	1 cut(s)	106
EcoRII	CCWGG	3 cut(s)	743, 749, 1163
EcoRV	GATATC	1 cut(s)	1672
EcoT14I	CCWWGG	2 cut(s)	886, 1491
EcoT22I	ATGCAT	2 cut(s)	944, 1726
EgeI	GGCGCC	1 cut(s)	953
EheI	GGCGCC	1 cut(s)	953
ErhI	CCWWGG	2 cut(s)	886, 1491
Esp3I	CGTCTC	1 cut(s)	308
FaqI	GGGAC	1 cut(s)	92
FauI	CCCGC	1 cut(s)	1267
FbaI	TGATCA	3 cut(s)	453, 595, 1176
Fnu4HI	GCNGC	4 cut(s)	265, 462, 756, 1184
FokI	GGATG	3 cut(s)	551, 567, 931
Fsp4HI	GCNGC	4 cut(s)	265, 462, 756, 1184
FspBI	CTAG	3 cut(s)	701, 947, 1376
GlaI	GCGC	3 cut(s)	953, 1394, 1805
GluI	GCNGC	4 cut(s)	265, 462, 756, 1184
GsaI	CCCAGC	1 cut(s)	1856
GsuI	CTGGAG	1 cut(s)	1439
HaeII	RGCGCY	1 cut(s)	955
HaeIII	GGCC	1 cut(s)	1573
HapII	CCGG	1 cut(s)	1067
HhaI	GCGC	3 cut(s)	954, 1395, 1806
Hin1I	GRCGYC	2 cut(s)	715, 952
Hin6I	GCGC	3 cut(s)	952, 1393, 1804
HinP1I	GCGC	3 cut(s)	952, 1393, 1804
HinfI	GANTC	6 cut(s)	140, 359, 412, 896, 1133, 1421
HpaII	CCGG	1 cut(s)	1067
HphI	GGTGA	2 cut(s)	421, 1024
Hpy166II	GTNNAC	7 cut(s)	101, 358, 416, 643, 847, 1486, 1488
Hpy188I	TCNGA	6 cut(s)	203, 720, 1009, 1634, 1676, 1918
Hpy188III	TCNNGA	7 cut(s)	280, 701, 1067, 1418, 1425, 1504, 1767
Hpy8I	GTNNAC	7 cut(s)	101, 358, 416, 643, 847, 1486, 1488
Hpy99I	CGWCG	3 cut(s)	1364, 1435, 1939
HpyAV	CCTTC	9 cut(s)	35, 572, 617, 1081, 1607, 1618, 1773, 1898, 1898
HpyCH4III	ACNGT	3 cut(s)	124, 781, 1785
HpyCH4IV	ACGT	6 cut(s)	715, 797, 1343, 1430, 1731, 1937
HpyF10VI	GCNNNNNNNGC	2 cut(s)	470, 555
HpyF3I	CTNAG	7 cut(s)	312, 603, 617, 719, 1008, 1149, 1917
HpySE526I	ACGT	6 cut(s)	715, 797, 1343, 1430, 1731, 1937
Hsp92I	GRCGYC	2 cut(s)	715, 952
HspAI	GCGC	3 cut(s)	952, 1393, 1804
KasI	GGCGCC	1 cut(s)	951
Kpn2I	TCCGGA	1 cut(s)	1066
Ksp22I	TGATCA	3 cut(s)	453, 595, 1176
LmnI	GCTCC	1 cut(s)	927
Lsp1109I	GCAGC	3 cut(s)	276, 448, 742
LweI	GCATC	8 cut(s)	207, 545, 619, 730, 909, 1445, 1625, 1828
MaeI	CTAG	3 cut(s)	701, 947, 1376
MaeII	ACGT	6 cut(s)	715, 797, 1343, 1430, 1731, 1937
MaeIII	GTNAC	3 cut(s)	493, 773, 1996
MbiI	CCGCTC	1 cut(s)	241
MboII	GAAGA	3 cut(s)	17, 1805, 1913
MflI	RGATCY	3 cut(s)	697, 1414, 1826
MhlI	GDGCHC	1 cut(s)	1912
MluCI	AATT	9 cut(s)	81, 211, 254, 383, 665, 679, 996, 1442, 1738
Mly113I	GGCGCC	1 cut(s)	952
MlyI	GAGTC	5 cut(s)	134, 353, 421, 905, 1430
MmeI	TCCRAC	3 cut(s)	58, 1497, 1585
Mph1103I	ATGCAT	2 cut(s)	944, 1726
MroI	TCCGGA	1 cut(s)	1066
MseI	TTAA	6 cut(s)	257, 566, 584, 1256, 1593, 1727
MslI	CAYNNNNRTG	1 cut(s)	203
MspI	CCGG	1 cut(s)	1067
MspR9I	CCNGG	3 cut(s)	745, 751, 1165
MvaI	CCWGG	3 cut(s)	745, 751, 1165
MvnI	CGCG	1 cut(s)	1293
MwoI	GCNNNNNNNGC	2 cut(s)	470, 555
NarI	GGCGCC	1 cut(s)	952
NlaIV	GGNNCC	6 cut(s)	108, 884, 953, 1245, 1511, 1828
NmuCI	GTSAC	1 cut(s)	773
NsiI	ATGCAT	2 cut(s)	944, 1726
NspI	RCATGY	2 cut(s)	946, 1724
PaeI	GCATGC	2 cut(s)	946, 1724
PfeI	GAWTC	1 cut(s)	1133
Pfl23II	CGTACG	1 cut(s)	759
PkrI	GCNGC	4 cut(s)	266, 463, 757, 1185
PleI	GAGTC	5 cut(s)	134, 353, 420, 904, 1429
PluTI	GGCGCC	1 cut(s)	955
PpsI	GAGTC	5 cut(s)	134, 353, 420, 904, 1429
PpuMI	RGGWCCY	1 cut(s)	106
PsiI	TTATAA	2 cut(s)	1878, 1929
Psp1406I	AACGTT	1 cut(s)	1731
Psp5II	RGGWCCY	1 cut(s)	106
Psp6I	CCWGG	3 cut(s)	743, 749, 1163
PspFI	CCCAGC	1 cut(s)	1852
PspGI	CCWGG	3 cut(s)	743, 749, 1163
PspLI	CGTACG	1 cut(s)	759
PspN4I	GGNNCC	6 cut(s)	108, 884, 953, 1245, 1511, 1828
PspPI	GGNCC	3 cut(s)	106, 747, 1571
PspPPI	RGGWCCY	1 cut(s)	106
PstI	CTGCAG	1 cut(s)	1688
PstNI	CAGNNNCTG	1 cut(s)	1007
PsuI	RGATCY	3 cut(s)	697, 1414, 1826
RsaI	GTAC	4 cut(s)	761, 1332, 1487, 1535
RsaNI	GTAC	4 cut(s)	760, 1331, 1486, 1534
RseI	CAYNNNNRTG	1 cut(s)	203
SaqAI	TTAA	6 cut(s)	257, 566, 584, 1256, 1593, 1727
SatI	GCNGC	4 cut(s)	265, 462, 756, 1184
Sau96I	GGNCC	3 cut(s)	106, 747, 1571
SchI	GAGTC	5 cut(s)	134, 353, 421, 905, 1430
ScrFI	CCNGG	3 cut(s)	745, 751, 1165
SduI	GDGCHC	1 cut(s)	1912
SfaNI	GCATC	8 cut(s)	207, 545, 619, 730, 909, 1445, 1625, 1828
SfcI	CTRYAG	2 cut(s)	780, 1684
SfoI	GGCGCC	1 cut(s)	953
SinI	GGWCC	2 cut(s)	106, 747
SmiMI	CAYNNNNRTG	1 cut(s)	203
SphI	GCATGC	2 cut(s)	946, 1724
Sse9I	AATT	9 cut(s)	81, 211, 254, 383, 665, 679, 996, 1442, 1738
SsiI	CCGC	6 cut(s)	241, 1183, 1274, 1291, 1412, 1898
SspDI	GGCGCC	1 cut(s)	951
SspI	AATATT	1 cut(s)	1837
SspMI	CTAG	3 cut(s)	701, 947, 1376
StyD4I	CCNGG	3 cut(s)	743, 749, 1163
StyI	CCWWGG	2 cut(s)	886, 1491
TaaI	ACNGT	3 cut(s)	124, 781, 1785
TaiI	ACGT	6 cut(s)	718, 800, 1346, 1433, 1734, 1940
TaqI	TCGA	4 cut(s)	523, 658, 1362, 1433
TasI	AATT	9 cut(s)	81, 211, 254, 383, 665, 679, 996, 1442, 1738
TatI	WGTACW	3 cut(s)	1330, 1485, 1533
TauI	GCSGC	1 cut(s)	1186
TfiI	GAWTC	1 cut(s)	1133
Tru1I	TTAA	6 cut(s)	257, 566, 584, 1256, 1593, 1727
Tru9I	TTAA	6 cut(s)	257, 566, 584, 1256, 1593, 1727
TscAI	CASTG	5 cut(s)	36, 274, 784, 906, 1008
TseFI	GTSAC	1 cut(s)	773
TseI	GCWGC	3 cut(s)	264, 461, 755
Tsp45I	GTSAC	1 cut(s)	773
TspGWI	ACGGA	2 cut(s)	853, 914
TspRI	CASTG	5 cut(s)	36, 274, 784, 906, 1008
VpaK11BI	GGWCC	2 cut(s)	106, 747
XbaI	TCTAGA	1 cut(s)	700
XceI	RCATGY	2 cut(s)	946, 1724
XspI	CTAG	3 cut(s)	701, 947, 1376
ZraI	GACGTC	1 cut(s)	716
Zsp2I	ATGCAT	2 cut(s)	944, 1726

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.