Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0004709

Physical Location & Seq

Genomic Coordinates Reverse (-)

3850899 .. 3853453

Gene Structure 2555 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1057500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGATAGGCAGCATTGAACTGTTGTTTAACATCTTCATGGTGTTGATAGTACTGGGAGGAATTTTGGGGTATTTGTATGGGCCCTACTGGAGAGTAAGAAGGGTACCTGGCCCTCCAACTATCCCTCTGGTAGGACACATTCCCTTGATGGCAAAGTATGGTCCTGATATATTCTCAGTTTTTGCTGAAGAGTATGGCCCTATTTTCAGGTTTCATATCGGGAGACAACCACTCATAATTGTAGCAGATGCAGAGCTTTGTAGAGAAGTTGGAATAAAGAAATTCAAAGACATTAAAAACAGAAGCATTCCACCTCCCCTTGCAGCTTCCCCTCTTCATCAGAAGGGTCTCTTTTTAACCAGGGATGCGAGATGGGTGACGACGCGAAACACTATATTATCAGTGTATCAACCTTCCCACTTAGCCAACCTTGTGCCTACAATGCAGTCATTTGTTGAATGTGCAACTGAAAAACTTGACTCCATGGCGAAAGTAGAAGAAGATATTACCTTTTCCGCCATCTCCCTTCGATTGGCCACAGATGTAATAGGACAAGCTGCATTTGGTGTCAACTTTGGCCTTTCTAAACCACAATCAGTCGGCGAATCAGTCGAAAAGTTTGATGGCAAAGACAATAATGACGATGAAGTCTCAGACTTTATCAACCAACACATATATTCCACAACACAGGTTAAGATGGATTTTTCGGGTTCCTTATCGATCATACTAGGACTACTTGTCCCCATACTTCAGTGGCCATTTTGGCAGATGTTGAAGAGAATTCCTGGCACTATGGATGGGAAAATCGAACATAATAACAGGCATTTGACTAGCCGGCTTGGTGCAGTTGTGGAAAAGAGAATGAAAGACAGCAGACGAGGTTCAAAGGACTTCTTGTCAGTTATACTGAATGCAAGGGAGTCAGGGAGGCTTTCGAAGAATGTTTTCACAACAGATTACATTAGTGCACTTGCTTATGAGCATCTCCTTGCCGGGTCGGCCACCACAGCATTCACATTGTCTTCAGCTGTCTACTTGGTTGCTGGACATCCAGAAGTAGAAAAAAAGTTGCTGGCAGAGATCGATGGATTTGGACCGCCTGATCAGATGGCAACTGCAAGTGATCTTCAACACAAATTTCCTTATCTTGATCAGGCAAGGCTTCTCAAATTTCAATGTTGCATTGAGGAATCTTCCTCATTAGCAATGAGGTTTTACATGGTTTCCCCATTAGTTGCTAGAGAAACATCTCGAGACGTCGAAATAGGCGGTTATATTTTACCAAAGGGGACTTGGGTTTGGTTAGCCCTCGGAGTATTAGCGAAAGATCAAAAGAACTTCCCAGAGCCAGAAAAGTTCAGGCCAGAGAGGTTTGATCCAAGCTGCAAAGAAGAGAAACAAAGGCATCCTTATGCTTTTATACCGTTTGGACTCGGGCCTCGATCCTGCATCGGTCAGAAATTTGCCATACAAGAAATAAAGCTTGCACTGATTCACTTATACCGGAAGTATGTGTTCCGGCACTCTCCATATATGGAGTCACCTCTGGAGCTTGAGTTTGGCATTGTTCTCAAGTTCAAGAATGGTGTCAAGCTTCGGGTCATAAAGCGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001763 GO:0006629 GO:0006720 GO:0006721 GO:0006810 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009653 GO:0009889 GO:0009891 GO:0009893 GO:0009914 GO:0009926 GO:0009934 GO:0009962 GO:0009963 GO:0009987 GO:0010016 GO:0010223 GO:0010346 GO:0010817 GO:0016108 GO:0016109 GO:0016114 GO:0016116 GO:0016117 GO:0019222 GO:0022603 GO:0032501 GO:0032502 GO:0042440 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0046148 GO:0048367 GO:0048509 GO:0048518 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0051179 GO:0051234 GO:0060918 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:1901576 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

539

Amino Acids

60.67

Weight (kDa)

9.14

Isoelectric Point (pI)

47.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	36 - 525	1.9e-77	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004709)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26170 AT2G26170
fragaria_vesca	FvH4_2g31660 FvH4_2g31680 FvH4_2g31680 FvH4_2g31680 FvH4_2g31680 FvH4_2g31680
malus_domestica	MD02G1142400.v1.1 MD08G1064200.v1.1 MD15G1057500.v1.1 MD15G1057600.v1.1
prunus_persica	Prupe.1G410100_v2.0.a1 Prupe.1G410100_v2.0.a1 Prupe.1G410300_v2.0.a1 Prupe.1G410300_v2.0.a1 Prupe.1G410300_v2.0.a1
pyrus_communis	pycom08g05270 pycom15g05410 pycom15g05420 pycom15g22400
rosa_chinensis	RchiOBHm_Chr6g0311161
rosa_laevigata	RLG00000010431
rosa_multiflora	Rmu_sc0008967.1_g000014 Rmu_sc0016962.1_g000003
rosa_roxburghii	Rroxscaffold_7G00157950
rosa_rugosa	Rorug06G0386000
rosa_samantha	Rh6BG510700 Rh6CG516400 Rh6DG502900
rosa_wichuraiana	Rw6G043550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	647
AatII	GACGTC	1 cut(s)	1260
Acc65I	GGTACC	1 cut(s)	103
AccB1I	GGYRCC	1 cut(s)	103
AccI	GTMKAC	1 cut(s)	1032
AccII	CGCG	1 cut(s)	385
AciI	CCGC	4 cut(s)	516, 1097, 1269, 1609
AclWI	GGATC	2 cut(s)	1370, 1437
AcoI	YGGCCR	3 cut(s)	534, 755, 999
AcsI	RAATTY	6 cut(s)	60, 281, 780, 1136, 1169, 1460
AcuI	CTGAAG	3 cut(s)	207, 734, 1008
AcyI	GRCGYC	1 cut(s)	1257
AfaI	GTAC	2 cut(s)	51, 105
AfiI	CCNNNNNNNGG	2 cut(s)	131, 532
AgsI	TTSAA	8 cut(s)	17, 286, 458, 775, 885, 1130, 1175, 1579
AhdI	GACNNNNNGTC	2 cut(s)	737, 895
AjnI	CCWGG	3 cut(s)	106, 359, 784
AluBI	AGCT	8 cut(s)	256, 326, 557, 1028, 1383, 1483, 1552, 1594
AluI	AGCT	8 cut(s)	256, 326, 557, 1028, 1383, 1483, 1552, 1594
Alw21I	GWGCWC	1 cut(s)	970
Alw26I	GTCTC	4 cut(s)	217, 353, 655, 1248
Alw44I	GTGCAC	1 cut(s)	966
AlwI	GGATC	2 cut(s)	1370, 1437
Ama87I	CYCGRG	2 cut(s)	1251, 1433
AoxI	GGCC	9 cut(s)	80, 109, 196, 534, 577, 755, 999, 1361, 1436
ApaI	GGGCCC	1 cut(s)	84
ApaLI	GTGCAC	1 cut(s)	966
ApeKI	GCWGC	4 cut(s)	9, 323, 557, 1383
ApoI	RAATTY	6 cut(s)	60, 281, 780, 1136, 1169, 1460
Asp700I	GAANNNNTTC	1 cut(s)	944
Asp718I	GGTACC	1 cut(s)	103
AspS9I	GGNCC	7 cut(s)	80, 81, 110, 161, 197, 1094, 1436
AsuC2I	CCSGG	1 cut(s)	994
AsuHPI	GGTGA	2 cut(s)	388, 1533
AsuII	TTCGAA	1 cut(s)	935
AvaI	CYCGRG	2 cut(s)	1251, 1433
AvaII	GGWCC	2 cut(s)	161, 1094
BaeGI	GKGCMC	2 cut(s)	84, 970
BalI	TGGCCA	2 cut(s)	536, 757
BanI	GGYRCC	1 cut(s)	103
BanII	GRGCYC	1 cut(s)	84
BbsI	GAAGAC	1 cut(s)	1014
Bbv12I	GWGCWC	1 cut(s)	970
BbvI	GCAGC	4 cut(s)	21, 335, 544, 1370
BccI	CCATC	8 cut(s)	142, 366, 527, 617, 691, 791, 1079, 1102
BciT130I	CCWGG	3 cut(s)	108, 361, 786
BclI	TGATCA	2 cut(s)	1102, 1150
BcnI	CCSGG	1 cut(s)	994
BcoDI	GTCTC	4 cut(s)	217, 353, 655, 1248
BfaI	CTAG	3 cut(s)	728, 831, 1239
BglI	GCCNNNNNGGC	2 cut(s)	763, 998
BisI	GCNGC	4 cut(s)	10, 324, 558, 1384
BlsI	GCNGC	4 cut(s)	11, 325, 559, 1385
BmcAI	AGTACT	1 cut(s)	51
Bme1390I	CCNGG	4 cut(s)	108, 361, 786, 994
Bme18I	GGWCC	2 cut(s)	161, 1094
BmeRI	GACNNNNNGTC	2 cut(s)	737, 895
BmeT110I	CYCGRG	2 cut(s)	1251, 1433
BmgT120I	GGNCC	7 cut(s)	80, 81, 110, 161, 197, 1094, 1436
BmiI	GGNNCC	3 cut(s)	82, 105, 712
BmrFI	CCNGG	4 cut(s)	108, 361, 786, 994
BmrI	ACTGGG	1 cut(s)	62
BmsI	GCATC	5 cut(s)	238, 355, 991, 1414, 1458
BmuI	ACTGGG	1 cut(s)	62
BpiI	GAAGAC	1 cut(s)	1014
BpmI	CTGGAG	2 cut(s)	109, 1568
Bpu14I	TTCGAA	1 cut(s)	935
BpuEI	CTTGAG	2 cut(s)	1556, 1574
BpuMI	CCSGG	1 cut(s)	994
Bsa29I	ATCGAT	2 cut(s)	719, 1083
BsaHI	GRCGYC	1 cut(s)	1257
BsaI	GGTCTC	1 cut(s)	353
BsaJI	CCNNGG	3 cut(s)	360, 483, 1309
BsaWI	WCCGGW	1 cut(s)	1503
BsaXI	ACNNNNNCTCC	2 cut(s)	1541, 1571
Bsc4I	CCNNNNNNNGG	2 cut(s)	131, 532
Bse118I	RCCGGY	1 cut(s)	834
Bse1I	ACTGG	2 cut(s)	57, 92
Bse3DI	GCAATG	1 cut(s)	1212
BseBI	CCWGG	3 cut(s)	108, 361, 786
BseCI	ATCGAT	2 cut(s)	719, 1083
BseDI	CCNNGG	3 cut(s)	360, 483, 1309
BseGI	GGATG	4 cut(s)	370, 802, 1048, 1405
BseLI	CCNNNNNNNGG	2 cut(s)	131, 532
BseMI	GCAATG	1 cut(s)	1212
BseMII	CTCAG	2 cut(s)	189, 666
BseNI	ACTGG	2 cut(s)	57, 92
BseSI	GKGCMC	2 cut(s)	84, 970
BseXI	GCAGC	4 cut(s)	21, 335, 544, 1370
BsgI	GTGCAG	1 cut(s)	864
Bsh1236I	CGCG	1 cut(s)	385
BshFI	GGCC	9 cut(s)	82, 111, 198, 536, 579, 757, 1001, 1363, 1438
BshNI	GGYRCC	1 cut(s)	103
BshVI	ATCGAT	2 cut(s)	719, 1083
BsiHKAI	GWGCWC	1 cut(s)	970
BsiHKCI	CYCGRG	2 cut(s)	1251, 1433
BsiSI	CCGG	4 cut(s)	835, 993, 1504, 1519
BslFI	GGGAC	2 cut(s)	725, 1303
BslI	CCNNNNNNNGG	2 cut(s)	131, 532
BsmAI	GTCTC	4 cut(s)	217, 353, 655, 1248
BsmBI	CGTCTC	1 cut(s)	1248
BsmFI	GGGAC	2 cut(s)	725, 1303
BsmI	GAATGC	3 cut(s)	306, 916, 1010
BsnI	GGCC	9 cut(s)	82, 111, 198, 536, 579, 757, 1001, 1363, 1438
Bso31I	GGTCTC	1 cut(s)	353
BsoBI	CYCGRG	2 cut(s)	1251, 1433
Bsp119I	TTCGAA	1 cut(s)	935
Bsp120I	GGGCCC	1 cut(s)	80
Bsp1286I	GDGCHC	2 cut(s)	84, 970
Bsp143I	GATC	8 cut(s)	720, 1080, 1102, 1123, 1150, 1327, 1375, 1442
Bsp19I	CCATGG	1 cut(s)	483
BspACI	CCGC	4 cut(s)	516, 1097, 1269, 1609
BspANI	GGCC	9 cut(s)	82, 111, 198, 536, 579, 757, 1001, 1363, 1438
BspCNI	CTCAG	2 cut(s)	188, 665
BspDI	ATCGAT	2 cut(s)	719, 1083
BspFNI	CGCG	1 cut(s)	385
BspLI	GGNNCC	3 cut(s)	82, 105, 712
BspPI	GGATC	2 cut(s)	1370, 1437
BspT104I	TTCGAA	1 cut(s)	935
BspT107I	GGYRCC	1 cut(s)	103
BspTNI	GGTCTC	1 cut(s)	353
BsrDI	GCAATG	1 cut(s)	1212
BsrFI	RCCGGY	1 cut(s)	834
BsrI	ACTGG	2 cut(s)	57, 92
BssAI	RCCGGY	1 cut(s)	834
BssECI	CCNNGG	3 cut(s)	360, 483, 1309
BssMI	GATC	8 cut(s)	720, 1080, 1102, 1123, 1150, 1327, 1375, 1442
BssNI	GRCGYC	1 cut(s)	1257
BssT1I	CCWWGG	1 cut(s)	483
Bst2UI	CCWGG	3 cut(s)	108, 361, 786
Bst4CI	ACNGT	2 cut(s)	21, 1425
Bst6I	CTCTTC	4 cut(s)	183, 339, 770, 1386
BstACI	GRCGYC	1 cut(s)	1257
BstBI	TTCGAA	1 cut(s)	935
BstC8I	GCNNGC	3 cut(s)	836, 1074, 1485
BstDEI	CTNAG	3 cut(s)	175, 421, 652
BstDSI	CCRYGG	1 cut(s)	483
BstENI	CCTNNNNNAGG	1 cut(s)	129
BstF5I	GGATG	4 cut(s)	370, 802, 1048, 1405
BstFNI	CGCG	1 cut(s)	385
BstKTI	GATC	8 cut(s)	723, 1083, 1105, 1126, 1153, 1330, 1378, 1445
BstMAI	GTCTC	4 cut(s)	217, 353, 655, 1248
BstMBI	GATC	8 cut(s)	720, 1080, 1102, 1123, 1150, 1327, 1375, 1442
BstMWI	GCNNNNNNNGC	4 cut(s)	442, 763, 998, 1007
BstNI	CCWGG	3 cut(s)	108, 361, 786
BstSCI	CCNGG	4 cut(s)	106, 359, 784, 992
BstSLI	GKGCMC	2 cut(s)	84, 970
BstUI	CGCG	1 cut(s)	385
BstV1I	GCAGC	4 cut(s)	21, 335, 544, 1370
BstV2I	GAAGAC	1 cut(s)	1014
Bsu15I	ATCGAT	2 cut(s)	719, 1083
BsuRI	GGCC	9 cut(s)	82, 111, 198, 536, 579, 757, 1001, 1363, 1438
BsuTUI	ATCGAT	2 cut(s)	719, 1083
BtgI	CCRYGG	1 cut(s)	483
BtsCI	GGATG	4 cut(s)	370, 802, 1048, 1405
BtsIMutI	CAGTG	3 cut(s)	408, 758, 1487
Cac8I	GCNNGC	3 cut(s)	836, 1074, 1485
Cfr10I	RCCGGY	1 cut(s)	834
Cfr13I	GGNCC	7 cut(s)	80, 81, 110, 161, 197, 1094, 1436
ClaI	ATCGAT	2 cut(s)	719, 1083
CseI	GACGC	1 cut(s)	391
Csp6I	GTAC	2 cut(s)	50, 104
CviAII	CATG	3 cut(s)	37, 484, 1219
CviQI	GTAC	2 cut(s)	50, 104
DdeI	CTNAG	3 cut(s)	175, 421, 652
DpnI	GATC	8 cut(s)	722, 1082, 1104, 1125, 1152, 1329, 1377, 1444
DpnII	GATC	8 cut(s)	720, 1080, 1102, 1123, 1150, 1327, 1375, 1442
DrdI	GACNNNNNNGTC	1 cut(s)	647
DriI	GACNNNNNGTC	2 cut(s)	737, 895
DseDI	GACNNNNNNGTC	1 cut(s)	647
EaeI	YGGCCR	3 cut(s)	534, 755, 999
Eam1104I	CTCTTC	4 cut(s)	183, 339, 770, 1386
Eam1105I	GACNNNNNGTC	2 cut(s)	737, 895
EarI	CTCTTC	4 cut(s)	183, 339, 770, 1386
EciI	GGCGGA	1 cut(s)	505
Eco130I	CCWWGG	1 cut(s)	483
Eco24I	GRGCYC	1 cut(s)	84
Eco31I	GGTCTC	1 cut(s)	353
Eco47I	GGWCC	2 cut(s)	161, 1094
Eco57I	CTGAAG	3 cut(s)	207, 734, 1008
Eco88I	CYCGRG	2 cut(s)	1251, 1433
EcoNI	CCTNNNNNAGG	1 cut(s)	129
EcoO109I	RGGNCCY	1 cut(s)	81
EcoRI	GAATTC	1 cut(s)	780
EcoRII	CCWGG	3 cut(s)	106, 359, 784
EcoT14I	CCWWGG	1 cut(s)	483
EcoT38I	GRGCYC	1 cut(s)	84
ErhI	CCWWGG	1 cut(s)	483
Esp3I	CGTCTC	1 cut(s)	1248
FaeI	CATG	3 cut(s)	40, 487, 1222
FalI	AAGNNNNNCTT	6 cut(s)	335, 367, 878, 910, 1393, 1425
FaqI	GGGAC	2 cut(s)	725, 1303
FatI	CATG	3 cut(s)	36, 483, 1218
FbaI	TGATCA	2 cut(s)	1102, 1150
FblI	GTMKAC	1 cut(s)	1032
Fnu4HI	GCNGC	4 cut(s)	10, 324, 558, 1384
FokI	GGATG	4 cut(s)	377, 809, 1035, 1392
FriOI	GRGCYC	1 cut(s)	84
Fsp4HI	GCNGC	4 cut(s)	10, 324, 558, 1384
FspBI	CTAG	3 cut(s)	728, 831, 1239
GluI	GCNGC	4 cut(s)	10, 324, 558, 1384
GsuI	CTGGAG	2 cut(s)	109, 1568
HaeIII	GGCC	9 cut(s)	82, 111, 198, 536, 579, 757, 1001, 1363, 1438
HapII	CCGG	4 cut(s)	835, 993, 1504, 1519
HgaI	GACGC	1 cut(s)	391
Hin1I	GRCGYC	1 cut(s)	1257
Hin1II	CATG	3 cut(s)	40, 487, 1222
HincII	GTYRAC	1 cut(s)	571
HindII	GTYRAC	1 cut(s)	571
HindIII	AAGCTT	2 cut(s)	1481, 1592
HinfI	GANTC	7 cut(s)	479, 605, 920, 1190, 1431, 1492, 1538
HpaII	CCGG	4 cut(s)	835, 993, 1504, 1519
HphI	GGTGA	2 cut(s)	388, 1533
Hpy166II	GTNNAC	3 cut(s)	571, 968, 1033
Hpy188I	TCNGA	5 cut(s)	342, 655, 1107, 1313, 1458
Hpy188III	TCNNGA	8 cut(s)	164, 220, 1052, 1148, 1251, 1253, 1547, 1579
Hpy8I	GTNNAC	3 cut(s)	571, 968, 1033
Hpy99I	CGWCG	2 cut(s)	385, 1262
HpyAV	CCTTC	4 cut(s)	93, 337, 423, 536
HpyCH4III	ACNGT	2 cut(s)	21, 1425
HpyCH4IV	ACGT	1 cut(s)	1257
HpyF10VI	GCNNNNNNNGC	4 cut(s)	442, 763, 998, 1007
HpyF3I	CTNAG	3 cut(s)	175, 421, 652
HpySE526I	ACGT	1 cut(s)	1257
Hsp92I	GRCGYC	1 cut(s)	1257
Hsp92II	CATG	3 cut(s)	40, 487, 1222
KpnI	GGTACC	1 cut(s)	107
KroI	GCCGGC	1 cut(s)	834
KroNI	GCCGGC	1 cut(s)	836
Ksp22I	TGATCA	2 cut(s)	1102, 1150
Kzo9I	GATC	8 cut(s)	720, 1080, 1102, 1123, 1150, 1327, 1375, 1442
LmnI	GCTCC	1 cut(s)	1549
Lsp1109I	GCAGC	4 cut(s)	21, 335, 544, 1370
LweI	GCATC	5 cut(s)	238, 355, 991, 1414, 1458
MaeI	CTAG	3 cut(s)	728, 831, 1239
MaeII	ACGT	1 cut(s)	1257
MaeIII	GTNAC	2 cut(s)	376, 1539
MalI	GATC	8 cut(s)	722, 1082, 1104, 1125, 1152, 1329, 1377, 1444
MboI	GATC	8 cut(s)	720, 1080, 1102, 1123, 1150, 1327, 1375, 1442
MhlI	GDGCHC	2 cut(s)	84, 970
MlsI	TGGCCA	2 cut(s)	536, 757
MluCI	AATT	7 cut(s)	60, 237, 281, 780, 1136, 1169, 1460
MluNI	TGGCCA	2 cut(s)	536, 757
MlyI	GAGTC	4 cut(s)	473, 929, 1425, 1547
MmeI	TCCRAC	2 cut(s)	140, 250
Mox20I	TGGCCA	2 cut(s)	536, 757
MroNI	GCCGGC	1 cut(s)	834
MroXI	GAANNNNTTC	1 cut(s)	944
MscI	TGGCCA	2 cut(s)	536, 757
MseI	TTAA	4 cut(s)	27, 294, 356, 693
MslI	CAYNNNNRTG	2 cut(s)	35, 1410
Msp20I	TGGCCA	2 cut(s)	536, 757
MspA1I	CMGCKG	1 cut(s)	1028
MspI	CCGG	4 cut(s)	835, 993, 1504, 1519
MspR9I	CCNGG	4 cut(s)	108, 361, 786, 994
Mva1269I	GAATGC	3 cut(s)	306, 916, 1010
MvaI	CCWGG	3 cut(s)	108, 361, 786
MvnI	CGCG	1 cut(s)	385
MwoI	GCNNNNNNNGC	4 cut(s)	442, 763, 998, 1007
NaeI	GCCGGC	1 cut(s)	836
NciI	CCSGG	1 cut(s)	994
NcoI	CCATGG	1 cut(s)	483
NdeII	GATC	8 cut(s)	720, 1080, 1102, 1123, 1150, 1327, 1375, 1442
NgoMIV	GCCGGC	1 cut(s)	834
NlaIII	CATG	3 cut(s)	40, 487, 1222
NlaIV	GGNNCC	3 cut(s)	82, 105, 712
NmuCI	GTSAC	2 cut(s)	376, 1539
NspV	TTCGAA	1 cut(s)	935
PaeR7I	CTCGAG	1 cut(s)	1251
PctI	GAATGC	3 cut(s)	306, 916, 1010
PdiI	GCCGGC	1 cut(s)	836
PdmI	GAANNNNTTC	1 cut(s)	944
PfeI	GAWTC	3 cut(s)	605, 1190, 1492
PkrI	GCNGC	4 cut(s)	11, 325, 559, 1385
PleI	GAGTC	4 cut(s)	473, 928, 1425, 1546
PpsI	GAGTC	4 cut(s)	473, 928, 1425, 1546
Psp6I	CCWGG	3 cut(s)	106, 359, 784
PspGI	CCWGG	3 cut(s)	106, 359, 784
PspN4I	GGNNCC	3 cut(s)	82, 105, 712
PspOMI	GGGCCC	1 cut(s)	80
PspPI	GGNCC	7 cut(s)	80, 81, 110, 161, 197, 1094, 1436
PvuII	CAGCTG	1 cut(s)	1028
RsaI	GTAC	2 cut(s)	51, 105
RsaNI	GTAC	2 cut(s)	50, 104
RseI	CAYNNNNRTG	2 cut(s)	35, 1410
SaqAI	TTAA	4 cut(s)	27, 294, 356, 693
SatI	GCNGC	4 cut(s)	10, 324, 558, 1384
Sau3AI	GATC	8 cut(s)	720, 1080, 1102, 1123, 1150, 1327, 1375, 1442
Sau96I	GGNCC	7 cut(s)	80, 81, 110, 161, 197, 1094, 1436
ScaI	AGTACT	1 cut(s)	51
SchI	GAGTC	4 cut(s)	473, 929, 1425, 1547
ScrFI	CCNGG	4 cut(s)	108, 361, 786, 994
SduI	GDGCHC	2 cut(s)	84, 970
SfaNI	GCATC	5 cut(s)	238, 355, 991, 1414, 1458
Sfr274I	CTCGAG	1 cut(s)	1251
SfuI	TTCGAA	1 cut(s)	935
SinI	GGWCC	2 cut(s)	161, 1094
SlaI	CTCGAG	1 cut(s)	1251
SmiMI	CAYNNNNRTG	2 cut(s)	35, 1410
SmlI	CTYRAG	3 cut(s)	1251, 1553, 1571
SmoI	CTYRAG	3 cut(s)	1251, 1553, 1571
Sse9I	AATT	7 cut(s)	60, 237, 281, 780, 1136, 1169, 1460
SsiI	CCGC	4 cut(s)	516, 1097, 1269, 1609
SspMI	CTAG	3 cut(s)	728, 831, 1239
StyD4I	CCNGG	4 cut(s)	106, 359, 784, 992
StyI	CCWWGG	1 cut(s)	483
TaaI	ACNGT	2 cut(s)	21, 1425
TaiI	ACGT	1 cut(s)	1260
TaqI	TCGA	9 cut(s)	529, 612, 719, 807, 935, 1083, 1252, 1260, 1441
TaqII	GACCGA	1 cut(s)	1442
TasI	AATT	7 cut(s)	60, 237, 281, 780, 1136, 1169, 1460
TatI	WGTACW	1 cut(s)	49
TfiI	GAWTC	3 cut(s)	605, 1190, 1492
Tru1I	TTAA	4 cut(s)	27, 294, 356, 693
Tru9I	TTAA	4 cut(s)	27, 294, 356, 693
TscAI	CASTG	3 cut(s)	408, 758, 1494
TseFI	GTSAC	2 cut(s)	376, 1539
TseI	GCWGC	4 cut(s)	9, 323, 557, 1383
Tsp45I	GTSAC	2 cut(s)	376, 1539
TspDTI	ATGAA	5 cut(s)	25, 203, 326, 660, 878
TspRI	CASTG	3 cut(s)	408, 758, 1494
VneI	GTGCAC	1 cut(s)	966
VpaK11BI	GGWCC	2 cut(s)	161, 1094
XagI	CCTNNNNNAGG	1 cut(s)	129
XapI	RAATTY	6 cut(s)	60, 281, 780, 1136, 1169, 1460
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1290
XhoI	CTCGAG	1 cut(s)	1251
XmiI	GTMKAC	1 cut(s)	1032
XmnI	GAANNNNTTC	1 cut(s)	944
XspI	CTAG	3 cut(s)	728, 831, 1239
ZraI	GACGTC	1 cut(s)	1258
ZrmI	AGTACT	1 cut(s)	51

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.