AT2G26170

cytochrome P450

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
11140809 .. 11143360
2552 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G26170.1

Sequence Viewer

Length: 1569 bp
ATGAAGACGCAACATCAATGGTGGGAAGTTCTTGATCCATTCTTGACACAACACGAAGCTCTTATTGCATTCTTGACTTTTGCAGCGGTTGTAATTGTGATTTACTTGTACCGACCCTCCTGGTCCGTATGCAATGTTCCCGGTCCAACCGCTATGCCTCTAGTTGGTCACTTGCCCTTGATGGCTAAGTATGGTCCTGATGTCTTCTCCGTTCTTGCTAAGCAATATGGCCCTATTTTCAGATTTCAGATGGGGAGGCAACCACTGATAATAATAGCAGAAGCAGAGCTTTGCAGAGAAGTTGGGATAAAGAAGTTCAAAGATCTTCCAAACAGAAGCATTCCTTCCCCAATCTCAGCTTCTCCTCTTCACAAGAAAGGCCTCTTCTTCACCAGGGACAAGAGATGGTCTAAAATGAGAAACACCATCCTATCTCTCTATCAGCCTTCACATTTAACAAGTCTTATCCCTACAATGCATAGTTTCATCACTTCTGCTACTCATAATCTTGATTCTAAACCGCGAGATATCGTTTTCTCCAACCTCTTCCTCAAACTTACCACTGATATCATCGGACAAGCGGCTTTTGGAGTCGACTTCGGTCTTTCCGGGAAGAAACCAATCAAAGATGTGGAGGTGACTGATTTCATAAACCAGCATGTCTACTCTACAACACAACTCAAGATGGATTTATCAGGATCACTCTCTATCATCTTAGGCTTACTGATTCCGATTCTTCAAGAGCCGTTTAGGCAGGTGTTGAAGAGGATACCGGGAACAATGGACTGGAGAGTCGAGAAGACTAATGCAAGACTGAGTGGACAACTTAATGAGATTGTGTCAAAGCGAGCCAAGGAGGCTGAGACTGACTCAAAAGACTTCTTGTCATTGATTTTGAAAGCTCGAGAGTCCGATCCTTTCGCCAAAAACATCTTCACATCGGATTATATTAGTGCTGTGACTTATGAGCATCTTCTTGCTGGCTCTGCAACCACTGCTTTCACACTATCCTCTGTTCTTTACTTAGTCTCTGGTCATCTTGATGTTGAGAAACGTCTGCTTCAAGAAATTGACGGGTTTGGGAACCGTGATCTGATCCCGACTGCTCATGACTTACAACACAAGTTTCCATACCTCGATCAGGTCATTAAAGAGGCTATGAGATTCTACATGGTTTCTCCTTTGGTTGCAAGGGAAACTGCTAAAGAAGTGGAGATAGGAGGTTATTTACTCCCAAAGGGGACATGGGTTTGGTTAGCACTAGGAGTTCTAGCAAAGGACCCTAAAAACTTTCCAGAACCGGAGAAGTTCAAGCCGGAAAGATTTGATCCGAACGGAGAAGAGGAGAAACATAGACATCCATACGCTTTCATCCCATTCGGTATCGGTCCACGAGCCTGTGTTGGACAGAGATTTGCCCTGCAAGAGATCAAACTCACATTACTGCATCTCTACCGTAATTACATTTTCAGACATTCCCTAGAAATGGAGATACCACTGCAGCTTGATTATGGTATAATTCTCAGCTTCAAGAACGGGGTTAAGCTCAGAACCATCAAAAGATTCTGA

Protein Analysis

522

Amino Acids

59.42

Weight (kDa)

9.31

Isoelectric Point (pI)

34.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 47 - 492 4.9e-83 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 745
AasI GACNNNNNNGTC 1 cut(s) 791
Acc36I ACCTGC 1 cut(s) 745
AccI GTMKAC 2 cut(s) 594, 663
AccII CGCG 1 cut(s) 523
AciI CCGC 4 cut(s) 86, 150, 521, 581
AclWI GGATC 5 cut(s) 29, 706, 908, 1090, 1322
AfaI GTAC 1 cut(s) 110
AfiI CCNNNNNNNGG 3 cut(s) 164, 1141, 1486
AgsI TTSAA 7 cut(s) 319, 740, 763, 898, 1064, 1312, 1531
AhdI GACNNNNNGTC 1 cut(s) 883
AjnI CCWGG 2 cut(s) 119, 392
AjuI GAANNNNNNNTTGG 4 cut(s) 343, 375, 917, 949
AluBI AGCT 7 cut(s) 59, 289, 359, 902, 1504, 1527, 1546
AluI AGCT 7 cut(s) 59, 289, 359, 902, 1504, 1527, 1546
Alw26I GTCTC 2 cut(s) 857, 1033
AlwI GGATC 5 cut(s) 29, 706, 908, 1090, 1322
Ama87I CYCGRG 1 cut(s) 903
AoxI GGCC 2 cut(s) 229, 379
ApeKI GCWGC 2 cut(s) 83, 1501
AspS9I GGNCC 6 cut(s) 123, 143, 194, 230, 1279, 1388
AsuC2I CCSGG 3 cut(s) 141, 610, 774
AsuHPI GGTGA 2 cut(s) 382, 649
AvaI CYCGRG 1 cut(s) 903
AvaII GGWCC 5 cut(s) 123, 143, 194, 1279, 1388
BauI CACGAG 1 cut(s) 1392
BbsI GAAGAC 3 cut(s) 11, 196, 806
BbvI GCAGC 2 cut(s) 95, 1513
BccI CCATC 6 cut(s) 175, 244, 399, 434, 679, 1562
BceAI ACGGC 1 cut(s) 730
BciT130I CCWGG 2 cut(s) 121, 394
BciVI GTATCC 1 cut(s) 762
BcnI CCSGG 3 cut(s) 141, 610, 774
BcoDI GTCTC 2 cut(s) 857, 1033
BfaI CTAG 4 cut(s) 161, 1262, 1271, 1481
BfmI CTRYAG 1 cut(s) 1499
BfuAI ACCTGC 1 cut(s) 745
BfuI GTATCC 1 cut(s) 762
BglI GCCNNNNNGGC 2 cut(s) 751, 857
BglII AGATCT 1 cut(s) 322
BisI GCNGC 3 cut(s) 84, 582, 1502
BlpI GCTNAGC 1 cut(s) 219
BlsI GCNGC 3 cut(s) 85, 583, 1503
Bme1390I CCNGG 5 cut(s) 121, 141, 394, 610, 774
Bme18I GGWCC 5 cut(s) 123, 143, 194, 1279, 1388
BmeRI GACNNNNNGTC 1 cut(s) 883
BmeT110I CYCGRG 1 cut(s) 903
BmgT120I GGNCC 6 cut(s) 123, 143, 194, 230, 1279, 1388
BmiI GGNNCC 2 cut(s) 1085, 1281
BmrFI CCNGG 5 cut(s) 121, 141, 394, 610, 774
BmsI GCATC 2 cut(s) 979, 1456
BoxI GACNNNNGTC 1 cut(s) 600
BpiI GAAGAC 3 cut(s) 11, 196, 806
BplI GAGNNNNNCTC 2 cut(s) 854, 886
BpmI CTGGAG 1 cut(s) 808
Bpu1102I GCTNAGC 1 cut(s) 219
BpuEI CTTGAG 1 cut(s) 665
BpuMI CCSGG 3 cut(s) 141, 610, 774
BsaJI CCNNGG 2 cut(s) 393, 852
BsaWI WCCGGW 1 cut(s) 1300
BsaXI ACNNNNNCTCC 2 cut(s) 101, 131
Bsc4I CCNNNNNNNGG 3 cut(s) 164, 1141, 1486
Bse1I ACTGG 1 cut(s) 791
Bse3DI GCAATG 1 cut(s) 139
BseBI CCWGG 2 cut(s) 121, 394
BseDI CCNNGG 2 cut(s) 393, 852
BseGI GGATG 3 cut(s) 426, 1357, 1371
BseLI CCNNNNNNNGG 3 cut(s) 164, 1141, 1486
BseMI GCAATG 1 cut(s) 139
BseMII CTCAG 5 cut(s) 369, 806, 852, 1537, 1561
BseNI ACTGG 1 cut(s) 791
BseRI GAGGAG 2 cut(s) 354, 1358
BseXI GCAGC 2 cut(s) 95, 1513
Bsh1236I CGCG 1 cut(s) 523
BshFI GGCC 2 cut(s) 231, 381
BsiHKCI CYCGRG 1 cut(s) 903
BsiSI CCGG 5 cut(s) 141, 609, 773, 1301, 1316
BslFI GGGAC 2 cut(s) 410, 1255
BslI CCNNNNNNNGG 3 cut(s) 164, 1141, 1486
BsmAI GTCTC 2 cut(s) 857, 1033
BsmFI GGGAC 2 cut(s) 410, 1255
BsmI GAATGC 2 cut(s) 68, 339
BsnI GGCC 2 cut(s) 231, 381
BsoBI CYCGRG 1 cut(s) 903
Bsp143I GATC 9 cut(s) 34, 322, 698, 913, 1090, 1095, 1138, 1327, 1428
Bsp1720I GCTNAGC 1 cut(s) 219
BspACI CCGC 4 cut(s) 86, 150, 521, 581
BspANI GGCC 2 cut(s) 231, 381
BspCNI CTCAG 5 cut(s) 368, 807, 853, 1536, 1560
BspFNI CGCG 1 cut(s) 523
BspHI TCATGA 1 cut(s) 1108
BspLI GGNNCC 2 cut(s) 1085, 1281
BspMAI CTGCAG 1 cut(s) 1503
BspMI ACCTGC 1 cut(s) 745
BspPI GGATC 5 cut(s) 29, 706, 908, 1090, 1322
BsrDI GCAATG 1 cut(s) 139
BsrI ACTGG 1 cut(s) 791
BssECI CCNNGG 2 cut(s) 393, 852
BssMI GATC 9 cut(s) 34, 322, 698, 913, 1090, 1095, 1138, 1327, 1428
BssSI CACGAG 1 cut(s) 1392
BssT1I CCWWGG 1 cut(s) 852
Bst2BI CACGAG 1 cut(s) 1392
Bst2UI CCWGG 2 cut(s) 121, 394
Bst4CI ACNGT 2 cut(s) 1088, 1457
Bst6I CTCTTC 5 cut(s) 372, 389, 551, 758, 1335
BstAPI GCANNNNNTGC 1 cut(s) 995
BstC8I GCNNGC 2 cut(s) 849, 982
BstDEI CTNAG 9 cut(s) 186, 219, 355, 715, 815, 861, 1024, 1523, 1547
BstENI CCTNNNNNAGG 1 cut(s) 1139
BstF5I GGATG 3 cut(s) 426, 1357, 1371
BstFNI CGCG 1 cut(s) 523
BstKTI GATC 9 cut(s) 37, 325, 701, 916, 1093, 1098, 1141, 1330, 1431
BstMAI GTCTC 2 cut(s) 857, 1033
BstMBI GATC 9 cut(s) 34, 322, 698, 913, 1090, 1095, 1138, 1327, 1428
BstMWI GCNNNNNNNGC 5 cut(s) 65, 751, 857, 986, 995
BstNI CCWGG 2 cut(s) 121, 394
BstNSI RCATGY 1 cut(s) 662
BstPAI GACNNNNGTC 1 cut(s) 600
BstSCI CCNGG 5 cut(s) 119, 139, 392, 608, 772
BstSFI CTRYAG 1 cut(s) 1499
BstUI CGCG 1 cut(s) 523
BstV1I GCAGC 2 cut(s) 95, 1513
BstV2I GAAGAC 3 cut(s) 11, 196, 806
BstX2I RGATCY 1 cut(s) 322
BstYI RGATCY 1 cut(s) 322
BsuI GTATCC 1 cut(s) 762
BsuRI GGCC 2 cut(s) 231, 381
BtsCI GGATG 3 cut(s) 426, 1357, 1371
BtsI GCAGTG 2 cut(s) 993, 1496
BtsIMutI CAGTG 4 cut(s) 263, 561, 993, 1496
BveI ACCTGC 1 cut(s) 745
Cac8I GCNNGC 2 cut(s) 849, 982
CciI TCATGA 1 cut(s) 1108
Cfr13I GGNCC 6 cut(s) 123, 143, 194, 230, 1279, 1388
CseI GACGC 1 cut(s) 16
Csp6I GTAC 1 cut(s) 109
CviAII CATG 4 cut(s) 659, 1109, 1171, 1245
CviQI GTAC 1 cut(s) 109
DdeI CTNAG 9 cut(s) 186, 219, 355, 715, 815, 861, 1024, 1523, 1547
DpnI GATC 9 cut(s) 36, 324, 700, 915, 1092, 1097, 1140, 1329, 1430
DpnII GATC 9 cut(s) 34, 322, 698, 913, 1090, 1095, 1138, 1327, 1428
DrdI GACNNNNNNGTC 1 cut(s) 791
DriI GACNNNNNGTC 1 cut(s) 883
DseDI GACNNNNNNGTC 1 cut(s) 791
Eam1104I CTCTTC 5 cut(s) 372, 389, 551, 758, 1335
Eam1105I GACNNNNNGTC 1 cut(s) 883
EarI CTCTTC 5 cut(s) 372, 389, 551, 758, 1335
Eco130I CCWWGG 1 cut(s) 852
Eco147I AGGCCT 1 cut(s) 381
Eco32I GATATC 2 cut(s) 529, 568
Eco47I GGWCC 5 cut(s) 123, 143, 194, 1279, 1388
Eco88I CYCGRG 1 cut(s) 903
EcoNI CCTNNNNNAGG 1 cut(s) 1139
EcoO109I RGGNCCY 1 cut(s) 1279
EcoRII CCWGG 2 cut(s) 119, 392
EcoRV GATATC 2 cut(s) 529, 568
EcoT14I CCWWGG 1 cut(s) 852
EcoT22I ATGCAT 1 cut(s) 480
ErhI CCWWGG 1 cut(s) 852
FaeI CATG 4 cut(s) 662, 1112, 1174, 1248
FalI AAGNNNNNCTT 4 cut(s) 273, 305, 328, 360
FaqI GGGAC 2 cut(s) 410, 1255
FatI CATG 4 cut(s) 658, 1108, 1170, 1244
FblI GTMKAC 2 cut(s) 594, 663
Fnu4HI GCNGC 3 cut(s) 84, 582, 1502
FokI GGATG 3 cut(s) 413, 1344, 1358
Fsp4HI GCNGC 3 cut(s) 84, 582, 1502
FspBI CTAG 4 cut(s) 161, 1262, 1271, 1481
GluI GCNGC 3 cut(s) 84, 582, 1502
GsuI CTGGAG 1 cut(s) 808
HaeIII GGCC 2 cut(s) 231, 381
HapII CCGG 5 cut(s) 141, 609, 773, 1301, 1316
HgaI GACGC 1 cut(s) 16
Hin1II CATG 4 cut(s) 662, 1112, 1174, 1248
HincII GTYRAC 1 cut(s) 595
HindII GTYRAC 1 cut(s) 595
HinfI GANTC 9 cut(s) 512, 591, 727, 733, 792, 869, 908, 1164, 1563
HpaII CCGG 5 cut(s) 141, 609, 773, 1301, 1316
HphI GGTGA 2 cut(s) 382, 649
Hpy166II GTNNAC 4 cut(s) 595, 664, 821, 1391
Hpy8I GTNNAC 4 cut(s) 595, 664, 821, 1391
HpyAV CCTTC 2 cut(s) 354, 456
HpyCH4III ACNGT 2 cut(s) 1088, 1457
HpyCH4IV ACGT 1 cut(s) 1054
HpyF10VI GCNNNNNNNGC 5 cut(s) 65, 751, 857, 986, 995
HpyF3I CTNAG 9 cut(s) 186, 219, 355, 715, 815, 861, 1024, 1523, 1547
HpySE526I ACGT 1 cut(s) 1054
Hsp92II CATG 4 cut(s) 662, 1112, 1174, 1248
Kzo9I GATC 9 cut(s) 34, 322, 698, 913, 1090, 1095, 1138, 1327, 1428
Lsp1109I GCAGC 2 cut(s) 95, 1513
LweI GCATC 2 cut(s) 979, 1456
MaeI CTAG 4 cut(s) 161, 1262, 1271, 1481
MaeII ACGT 1 cut(s) 1054
MaeIII GTNAC 3 cut(s) 167, 637, 958
MalI GATC 9 cut(s) 36, 324, 700, 915, 1092, 1097, 1140, 1329, 1430
MboI GATC 9 cut(s) 34, 322, 698, 913, 1090, 1095, 1138, 1327, 1428
MflI RGATCY 1 cut(s) 322
MluCI AATT 4 cut(s) 93, 1068, 1459, 1518
MlyI GAGTC 4 cut(s) 600, 801, 863, 917
MmeI TCCRAC 3 cut(s) 170, 564, 1384
Mph1103I ATGCAT 1 cut(s) 480
MseI TTAA 4 cut(s) 455, 828, 1149, 1542
MslI CAYNNNNRTG 1 cut(s) 1041
MspA1I CMGCKG 1 cut(s) 86
MspI CCGG 5 cut(s) 141, 609, 773, 1301, 1316
MspR9I CCNGG 5 cut(s) 121, 141, 394, 610, 774
Mva1269I GAATGC 2 cut(s) 68, 339
MvaI CCWGG 2 cut(s) 121, 394
MvnI CGCG 1 cut(s) 523
MwoI GCNNNNNNNGC 5 cut(s) 65, 751, 857, 986, 995
NciI CCSGG 3 cut(s) 141, 610, 774
NdeII GATC 9 cut(s) 34, 322, 698, 913, 1090, 1095, 1138, 1327, 1428
NlaIII CATG 4 cut(s) 662, 1112, 1174, 1248
NlaIV GGNNCC 2 cut(s) 1085, 1281
NmuCI GTSAC 3 cut(s) 167, 637, 958
NsiI ATGCAT 1 cut(s) 480
NspI RCATGY 1 cut(s) 662
PaeR7I CTCGAG 1 cut(s) 903
PagI TCATGA 1 cut(s) 1108
PaqCI CACCTGC 1 cut(s) 745
PceI AGGCCT 1 cut(s) 381
PctI GAATGC 2 cut(s) 68, 339
PfeI GAWTC 5 cut(s) 512, 727, 733, 1164, 1563
PfoI TCCNGGA 1 cut(s) 608
PkrI GCNGC 3 cut(s) 85, 583, 1503
PleI GAGTC 4 cut(s) 599, 800, 863, 916
PpsI GAGTC 4 cut(s) 599, 800, 863, 916
PpuMI RGGWCCY 1 cut(s) 1279
PshAI GACNNNNGTC 1 cut(s) 600
Psp5II RGGWCCY 1 cut(s) 1279
Psp6I CCWGG 2 cut(s) 119, 392
PspGI CCWGG 2 cut(s) 119, 392
PspN4I GGNNCC 2 cut(s) 1085, 1281
PspPI GGNCC 6 cut(s) 123, 143, 194, 230, 1279, 1388
PspPPI RGGWCCY 1 cut(s) 1279
PsrI GAACNNNNNNTAC 2 cut(s) 120, 152
PstI CTGCAG 1 cut(s) 1503
PsuI RGATCY 1 cut(s) 322
RsaI GTAC 1 cut(s) 110
RsaNI GTAC 1 cut(s) 109
RseI CAYNNNNRTG 1 cut(s) 1041
SalI GTCGAC 1 cut(s) 593
SaqAI TTAA 4 cut(s) 455, 828, 1149, 1542
SatI GCNGC 3 cut(s) 84, 582, 1502
Sau3AI GATC 9 cut(s) 34, 322, 698, 913, 1090, 1095, 1138, 1327, 1428
Sau96I GGNCC 6 cut(s) 123, 143, 194, 230, 1279, 1388
SchI GAGTC 4 cut(s) 600, 801, 863, 917
ScrFI CCNGG 5 cut(s) 121, 141, 394, 610, 774
SfaNI GCATC 2 cut(s) 979, 1456
SfcI CTRYAG 1 cut(s) 1499
Sfr274I CTCGAG 1 cut(s) 903
SinI GGWCC 5 cut(s) 123, 143, 194, 1279, 1388
SlaI CTCGAG 1 cut(s) 903
SmiMI CAYNNNNRTG 1 cut(s) 1041
SmlI CTYRAG 2 cut(s) 680, 903
SmoI CTYRAG 2 cut(s) 680, 903
Sse9I AATT 4 cut(s) 93, 1068, 1459, 1518
SseBI AGGCCT 1 cut(s) 381
SsiI CCGC 4 cut(s) 86, 150, 521, 581
SspMI CTAG 4 cut(s) 161, 1262, 1271, 1481
StuI AGGCCT 1 cut(s) 381
StyD4I CCNGG 5 cut(s) 119, 139, 392, 608, 772
StyI CCWWGG 1 cut(s) 852
TaaI ACNGT 2 cut(s) 1088, 1457
TaiI ACGT 1 cut(s) 1057
TaqI TCGA 4 cut(s) 594, 795, 904, 1137
TaqII GACCGA 2 cut(s) 590, 1376
TasI AATT 4 cut(s) 93, 1068, 1459, 1518
TauI GCSGC 1 cut(s) 584
TfiI GAWTC 5 cut(s) 512, 727, 733, 1164, 1563
Tru1I TTAA 4 cut(s) 455, 828, 1149, 1542
Tru9I TTAA 4 cut(s) 455, 828, 1149, 1542
TscAI CASTG 4 cut(s) 270, 568, 1000, 1503
TseFI GTSAC 3 cut(s) 167, 637, 958
TseI GCWGC 2 cut(s) 83, 1501
Tsp45I GTSAC 3 cut(s) 167, 637, 958
TspDTI ATGAA 4 cut(s) 17, 475, 637, 1360
TspGWI ACGGA 3 cut(s) 115, 199, 1350
TspRI CASTG 4 cut(s) 270, 568, 1000, 1503
VpaK11BI GGWCC 5 cut(s) 123, 143, 194, 1279, 1388
XagI CCTNNNNNAGG 1 cut(s) 1139
XceI RCATGY 1 cut(s) 662
XcmI CCANNNNNNNNNTGG 1 cut(s) 1242
XhoI CTCGAG 1 cut(s) 903
XmiI GTMKAC 2 cut(s) 594, 663
XspI CTAG 4 cut(s) 161, 1262, 1271, 1481
Zsp2I ATGCAT 1 cut(s) 480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.