Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0004709

Physical Location & Seq

Genomic Coordinates Reverse (-)

11835564 .. 11837950

Gene Structure 2387 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1142400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGGAACTGCAGTTATTGTTCACCAATGGTTTTCTGGTATCACCATCGACCCTTTTCACGGCGTTGGCAATGTTTGCAGGAGTTTTGAGTTACTTGTATGGGCCCTACTGGAGGGTGAGAAGGGTACCTGGCCCTCCAGTTATCCCCTTGCTAGGACACCTTCCCTTGCTGGCAAAGTATGGTCCTGATGTATTCTCAGTTCTTGCCAAACAATATGGCCCTCTTTTCAGGTTTCATATGGGTAGACAGCCACTAATAATTGTAGCAGATGCAGAGCTTTGTAGAGAAGTAGGAATAAAAAATTTCAAAGATATCAACAACAGAAGCATTCCGTCTCCCATCGCAGCTTCCCCACTCCATCAGAAGGGTCTCTTCTTCACCAGGGATGCAAGATGGTCGACGATGCGAAACACTATATTATCGTTGTATCAGCCATCACACCTAGCCAGCCTTGTGCCCACAATGCAGTCGTTCATCGAGTCTGCAACTCAAAAGCTCGACTCCTCCAAAGAAGCGGAAGATATTACCTTTTCTAACCTCTCCCTCAGGTTGGCCACTGATGTAATAGGACAAGCTGCATTCGGAGTCAACTTTGGCCTCTCTAAACTGGAATCCATCAACGAATCAATCGACAAGATTGACAGCAAAGACAACAACGACGATGACCAAGTCTCAGATTTTATTAACCAACACATCTATTCCACTACTCAGCTTAAGATGGACTTATCCGGTTCCTTCTCAATTATACTGGGATTACTTGCCCCTATTCTCCAGGAGCCATTTAGGCAGGTCTTGAAAAGAATTCCTGGGACAATGGACTGGAAGGTTGAGCGTACAAACCGGAAGTTGAGTGGCCGGCTTGATGAGATTGTGGTGAAAAGAATGAAAGACAGTGAACGCGGTTCAAAGGACTTCTTGTCACTCATAATGAATGCGAGGGAGTCGGAAACTGTTGCAAAGAATGTCTTCACTCAAGACTACATTAGTGCGGTTACTTATGAGCATCTCCTAGCTGGATCAGCCACTACATCATTCACATTGTCTTCAACTGTCTACTTGGTAGCTGGACACCCAGAAGTCGAGAGGAAGTTGCTGGCGGAAATTGATGGATTTGGACCTCCTGATCAGATGCCAACTGCTTATGATCTTCAACACAAATTTCCTTATATTGATCAGGTTATTAAAGAGGCAATGAGGTTTTACTTGGTTTCACCATTGGTTGCAAGAGAAACATCTAGAGAAGTCGAAATAGGAGGCTATCTTCTACCAAAGGGGACTTGGGTGTGGCTAGCACTCGGAGTTTTAGCGAAAGATCCAAACAACTTTCCGGAACCAGACACGTTCAGGCCAGAGAGATTTGATCCAGATTGCAACGAAGAGAAACAAAGGCATCCTTACGCTTTTATACCATTTGGAATCGGGCCACGAGCATGCATTGGTCAGAAATTTTCACTACAAGAATTAAAGCTCTCGCTGATTCATTTATACCGGAAGTATGTATTCCGGCACTCTCCCAACATGGAGAAACCTCTGGCACTTGAGTATGGCATTGTTCTTAATTTCAAGAATGGTGTCAAGGTTAGAGTCGTAAAGCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001763 GO:0006629 GO:0006720 GO:0006721 GO:0006810 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009653 GO:0009889 GO:0009891 GO:0009893 GO:0009914 GO:0009926 GO:0009934 GO:0009962 GO:0009963 GO:0009987 GO:0010016 GO:0010223 GO:0010346 GO:0010817 GO:0016108 GO:0016109 GO:0016114 GO:0016116 GO:0016117 GO:0019222 GO:0022603 GO:0032501 GO:0032502 GO:0042440 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0046148 GO:0048367 GO:0048509 GO:0048518 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0051179 GO:0051234 GO:0060918 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:1901576 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

533

Amino Acids

60.11

Weight (kDa)

8.79

Isoelectric Point (pI)

36.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	43 - 519	2.7e-84	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004709)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26170 AT2G26170
fragaria_vesca	FvH4_2g31660 FvH4_2g31680 FvH4_2g31680 FvH4_2g31680 FvH4_2g31680 FvH4_2g31680
malus_domestica	MD02G1142400.v1.1 MD08G1064200.v1.1 MD15G1057500.v1.1 MD15G1057600.v1.1
prunus_persica	Prupe.1G410100_v2.0.a1 Prupe.1G410100_v2.0.a1 Prupe.1G410300_v2.0.a1 Prupe.1G410300_v2.0.a1 Prupe.1G410300_v2.0.a1
pyrus_communis	pycom08g05270 pycom15g05410 pycom15g05420 pycom15g22400
rosa_chinensis	RchiOBHm_Chr6g0311161
rosa_laevigata	RLG00000010431
rosa_multiflora	Rmu_sc0008967.1_g000014 Rmu_sc0016962.1_g000003
rosa_roxburghii	Rroxscaffold_7G00157950
rosa_rugosa	Rorug06G0386000
rosa_samantha	Rh6BG510700 Rh6CG516400 Rh6DG502900
rosa_wichuraiana	Rw6G043550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	778
Acc65I	GGTACC	1 cut(s)	124
AccB1I	GGYRCC	1 cut(s)	124
AccI	GTMKAC	3 cut(s)	244, 398, 1053
AccII	CGCG	1 cut(s)	900
AccIII	TCCGGA	1 cut(s)	1327
AciI	CCGC	5 cut(s)	515, 900, 989, 1097, 1594
AclWI	GGATC	3 cut(s)	1024, 1307, 1355
AcoI	YGGCCR	2 cut(s)	552, 853
AcsI	RAATTY	4 cut(s)	301, 801, 1157, 1445
AfaI	GTAC	2 cut(s)	126, 835
AfiI	CCNNNNNNNGG	5 cut(s)	58, 111, 152, 364, 550
AflII	CTTAAG	1 cut(s)	713
AflIII	ACRYGT	1 cut(s)	1338
AgsI	TTSAA	6 cut(s)	307, 796, 906, 1047, 1151, 1564
AhdI	GACNNNNNGTC	1 cut(s)	916
AjnI	CCWGG	4 cut(s)	127, 380, 771, 805
AluBI	AGCT	8 cut(s)	277, 347, 496, 575, 712, 1013, 1064, 1468
AluI	AGCT	8 cut(s)	277, 347, 496, 575, 712, 1013, 1064, 1468
Alw26I	GTCTC	3 cut(s)	339, 374, 676
AlwI	GGATC	3 cut(s)	1024, 1307, 1355
Aor13HI	TCCGGA	1 cut(s)	1327
AoxI	GGCC	8 cut(s)	101, 130, 217, 552, 595, 853, 1346, 1421
ApaI	GGGCCC	1 cut(s)	105
ApeKI	GCWGC	2 cut(s)	344, 575
ApoI	RAATTY	4 cut(s)	301, 801, 1157, 1445
Asp700I	GAANNNNTTC	1 cut(s)	965
Asp718I	GGTACC	1 cut(s)	124
AspS9I	GGNCC	7 cut(s)	101, 102, 131, 182, 218, 1115, 1421
AsuHPI	GGTGA	6 cut(s)	13, 33, 127, 370, 886, 1203
AsuNHI	GCTAGC	1 cut(s)	1288
AvaII	GGWCC	2 cut(s)	182, 1115
AxyI	CCTNAGG	1 cut(s)	545
BaeGI	GKGCMC	2 cut(s)	105, 459
BalI	TGGCCA	1 cut(s)	554
BanI	GGYRCC	1 cut(s)	124
BanII	GRGCYC	1 cut(s)	105
BauI	CACGAG	1 cut(s)	1425
BbsI	GAAGAC	2 cut(s)	958, 1035
BbvI	GCAGC	2 cut(s)	356, 562
BccI	CCATC	8 cut(s)	52, 347, 366, 387, 442, 623, 712, 1100
BceAI	ACGGC	1 cut(s)	75
BcgI	CGANNNNNNTGC	2 cut(s)	378, 412
BciT130I	CCWGG	4 cut(s)	129, 382, 773, 807
BclI	TGATCA	2 cut(s)	1123, 1171
BcoDI	GTCTC	3 cut(s)	339, 374, 676
BfaI	CTAG	5 cut(s)	152, 443, 1010, 1236, 1289
BfmI	CTRYAG	1 cut(s)	8
BfrI	CTTAAG	1 cut(s)	713
BfuAI	ACCTGC	1 cut(s)	778
BglI	GCCNNNNNGGC	1 cut(s)	784
BisI	GCNGC	2 cut(s)	345, 576
BlsI	GCNGC	2 cut(s)	346, 577
Bme1390I	CCNGG	4 cut(s)	129, 382, 773, 807
Bme18I	GGWCC	2 cut(s)	182, 1115
BmeRI	GACNNNNNGTC	1 cut(s)	916
BmgT120I	GGNCC	7 cut(s)	101, 102, 131, 182, 218, 1115, 1421
BmiI	GGNNCC	5 cut(s)	103, 126, 733, 777, 1332
BmrFI	CCNGG	4 cut(s)	129, 382, 773, 807
BmrI	ACTGGG	1 cut(s)	758
BmsI	GCATC	6 cut(s)	259, 376, 393, 1012, 1119, 1399
BmtI	GCTAGC	1 cut(s)	1292
BmuI	ACTGGG	1 cut(s)	758
BpiI	GAAGAC	2 cut(s)	958, 1035
BpmI	CTGGAG	3 cut(s)	120, 130, 755
BpuEI	CTTGAG	2 cut(s)	957, 1559
BsaI	GGTCTC	1 cut(s)	374
BsaJI	CCNNGG	2 cut(s)	381, 806
BsaWI	WCCGGW	4 cut(s)	728, 840, 1327, 1488
Bsc4I	CCNNNNNNNGG	5 cut(s)	58, 111, 152, 364, 550
Bse118I	RCCGGY	1 cut(s)	855
Bse1I	ACTGG	5 cut(s)	113, 137, 612, 753, 824
Bse21I	CCTNAGG	1 cut(s)	545
Bse3DI	GCAATG	2 cut(s)	75, 1197
BseAI	TCCGGA	1 cut(s)	1327
BseBI	CCWGG	4 cut(s)	129, 382, 773, 807
BseDI	CCNNGG	2 cut(s)	381, 806
BseGI	GGATG	2 cut(s)	391, 1390
BseLI	CCNNNNNNNGG	5 cut(s)	58, 111, 152, 364, 550
BseMI	GCAATG	2 cut(s)	75, 1197
BseMII	CTCAG	4 cut(s)	210, 559, 687, 722
BseNI	ACTGG	5 cut(s)	113, 137, 612, 753, 824
BseRI	GAGGAG	1 cut(s)	493
BseSI	GKGCMC	2 cut(s)	105, 459
BseXI	GCAGC	2 cut(s)	356, 562
Bsh1236I	CGCG	1 cut(s)	900
BshFI	GGCC	8 cut(s)	103, 132, 219, 554, 597, 855, 1348, 1423
BshNI	GGYRCC	1 cut(s)	124
BsiSI	CCGG	6 cut(s)	729, 841, 856, 1328, 1489, 1504
BslFI	GGGAC	2 cut(s)	823, 1288
BslI	CCNNNNNNNGG	5 cut(s)	58, 111, 152, 364, 550
BsmAI	GTCTC	3 cut(s)	339, 374, 676
BsmBI	CGTCTC	1 cut(s)	339
BsmFI	GGGAC	2 cut(s)	823, 1288
BsmI	GAATGC	3 cut(s)	327, 578, 937
BsnI	GGCC	8 cut(s)	103, 132, 219, 554, 597, 855, 1348, 1423
Bso31I	GGTCTC	1 cut(s)	374
Bsp120I	GGGCCC	1 cut(s)	101
Bsp1286I	GDGCHC	2 cut(s)	105, 459
Bsp13I	TCCGGA	1 cut(s)	1327
Bsp143I	GATC	6 cut(s)	1016, 1123, 1144, 1171, 1312, 1360
BspACI	CCGC	5 cut(s)	515, 900, 989, 1097, 1594
BspANI	GGCC	8 cut(s)	103, 132, 219, 554, 597, 855, 1348, 1423
BspCNI	CTCAG	4 cut(s)	209, 558, 686, 721
BspEI	TCCGGA	1 cut(s)	1327
BspFNI	CGCG	1 cut(s)	900
BspLI	GGNNCC	5 cut(s)	103, 126, 733, 777, 1332
BspMAI	CTGCAG	1 cut(s)	12
BspMI	ACCTGC	1 cut(s)	778
BspOI	GCTAGC	1 cut(s)	1292
BspPI	GGATC	3 cut(s)	1024, 1307, 1355
BspT107I	GGYRCC	1 cut(s)	124
BspTI	CTTAAG	1 cut(s)	713
BspTNI	GGTCTC	1 cut(s)	374
BsrDI	GCAATG	2 cut(s)	75, 1197
BsrFI	RCCGGY	1 cut(s)	855
BsrI	ACTGG	5 cut(s)	113, 137, 612, 753, 824
BssAI	RCCGGY	1 cut(s)	855
BssECI	CCNNGG	2 cut(s)	381, 806
BssMI	GATC	6 cut(s)	1016, 1123, 1144, 1171, 1312, 1360
BssSI	CACGAG	1 cut(s)	1425
Bst2BI	CACGAG	1 cut(s)	1425
Bst2UI	CCWGG	4 cut(s)	129, 382, 773, 807
Bst4CI	ACNGT	3 cut(s)	893, 952, 1051
Bst6I	CTCTTC	2 cut(s)	377, 1371
BstAFI	CTTAAG	1 cut(s)	713
BstAPI	GCANNNNNTGC	1 cut(s)	74
BstC8I	GCNNGC	6 cut(s)	171, 448, 857, 1095, 1290, 1432
BstDEI	CTNAG	4 cut(s)	196, 545, 673, 708
BstENI	CCTNNNNNAGG	1 cut(s)	109
BstF5I	GGATG	2 cut(s)	391, 1390
BstFNI	CGCG	1 cut(s)	900
BstKTI	GATC	6 cut(s)	1019, 1126, 1147, 1174, 1315, 1363
BstMAI	GTCTC	3 cut(s)	339, 374, 676
BstMBI	GATC	6 cut(s)	1016, 1123, 1144, 1171, 1312, 1360
BstMWI	GCNNNNNNNGC	4 cut(s)	74, 463, 784, 1019
BstNI	CCWGG	4 cut(s)	129, 382, 773, 807
BstNSI	RCATGY	1 cut(s)	1434
BstSCI	CCNGG	4 cut(s)	127, 380, 771, 805
BstSFI	CTRYAG	1 cut(s)	8
BstSLI	GKGCMC	2 cut(s)	105, 459
BstUI	CGCG	1 cut(s)	900
BstV1I	GCAGC	2 cut(s)	356, 562
BstV2I	GAAGAC	2 cut(s)	958, 1035
BstX2I	RGATCY	1 cut(s)	1312
BstYI	RGATCY	1 cut(s)	1312
Bsu36I	CCTNAGG	1 cut(s)	545
BsuRI	GGCC	8 cut(s)	103, 132, 219, 554, 597, 855, 1348, 1423
BtgZI	GCGATG	1 cut(s)	325
BtsCI	GGATG	2 cut(s)	391, 1390
BtsIMutI	CAGTG	2 cut(s)	555, 898
BveI	ACCTGC	1 cut(s)	778
Cac8I	GCNNGC	6 cut(s)	171, 448, 857, 1095, 1290, 1432
Cfr10I	RCCGGY	1 cut(s)	855
Cfr13I	GGNCC	7 cut(s)	101, 102, 131, 182, 218, 1115, 1421
Csp6I	GTAC	2 cut(s)	125, 834
CviAII	CATG	2 cut(s)	1431, 1519
CviQI	GTAC	2 cut(s)	125, 834
DdeI	CTNAG	4 cut(s)	196, 545, 673, 708
DpnI	GATC	6 cut(s)	1018, 1125, 1146, 1173, 1314, 1362
DpnII	GATC	6 cut(s)	1016, 1123, 1144, 1171, 1312, 1360
DriI	GACNNNNNGTC	1 cut(s)	916
EaeI	YGGCCR	2 cut(s)	552, 853
Eam1104I	CTCTTC	2 cut(s)	377, 1371
Eam1105I	GACNNNNNGTC	1 cut(s)	916
EarI	CTCTTC	2 cut(s)	377, 1371
EciI	GGCGGA	1 cut(s)	1112
Eco24I	GRGCYC	1 cut(s)	105
Eco31I	GGTCTC	1 cut(s)	374
Eco32I	GATATC	1 cut(s)	313
Eco47I	GGWCC	2 cut(s)	182, 1115
Eco81I	CCTNAGG	1 cut(s)	545
EcoNI	CCTNNNNNAGG	1 cut(s)	109
EcoO109I	RGGNCCY	1 cut(s)	102
EcoRI	GAATTC	1 cut(s)	801
EcoRII	CCWGG	4 cut(s)	127, 380, 771, 805
EcoRV	GATATC	1 cut(s)	313
EcoT22I	ATGCAT	1 cut(s)	1436
EcoT38I	GRGCYC	1 cut(s)	105
Esp3I	CGTCTC	1 cut(s)	339
FaeI	CATG	2 cut(s)	1434, 1522
FaqI	GGGAC	2 cut(s)	823, 1288
FatI	CATG	2 cut(s)	1430, 1518
FauNDI	CATATG	1 cut(s)	237
FbaI	TGATCA	2 cut(s)	1123, 1171
FblI	GTMKAC	3 cut(s)	244, 398, 1053
Fnu4HI	GCNGC	2 cut(s)	345, 576
FokI	GGATG	2 cut(s)	398, 1377
FriOI	GRGCYC	1 cut(s)	105
Fsp4HI	GCNGC	2 cut(s)	345, 576
FspBI	CTAG	5 cut(s)	152, 443, 1010, 1236, 1289
GluI	GCNGC	2 cut(s)	345, 576
GsuI	CTGGAG	3 cut(s)	120, 130, 755
HaeIII	GGCC	8 cut(s)	103, 132, 219, 554, 597, 855, 1348, 1423
HapII	CCGG	6 cut(s)	729, 841, 856, 1328, 1489, 1504
Hin1II	CATG	2 cut(s)	1434, 1522
HincII	GTYRAC	2 cut(s)	399, 589
HindII	GTYRAC	2 cut(s)	399, 589
HinfI	GANTC	9 cut(s)	479, 500, 585, 611, 623, 941, 1416, 1477, 1584
HpaII	CCGG	6 cut(s)	729, 841, 856, 1328, 1489, 1504
HphI	GGTGA	6 cut(s)	13, 33, 127, 370, 886, 1203
Hpy166II	GTNNAC	6 cut(s)	21, 245, 399, 589, 896, 1054
Hpy188I	TCNGA	7 cut(s)	363, 584, 676, 946, 1128, 1298, 1443
Hpy188III	TCNNGA	9 cut(s)	185, 793, 974, 1081, 1121, 1236, 1328, 1364, 1564
Hpy8I	GTNNAC	6 cut(s)	21, 245, 399, 589, 896, 1054
Hpy99I	CGWCG	2 cut(s)	403, 662
HpyAV	CCTTC	5 cut(s)	114, 170, 358, 745, 817
HpyCH4III	ACNGT	3 cut(s)	893, 952, 1051
HpyCH4IV	ACGT	1 cut(s)	1340
HpyF10VI	GCNNNNNNNGC	4 cut(s)	74, 463, 784, 1019
HpyF3I	CTNAG	4 cut(s)	196, 545, 673, 708
HpySE526I	ACGT	1 cut(s)	1340
Hsp92II	CATG	2 cut(s)	1434, 1522
Kpn2I	TCCGGA	1 cut(s)	1327
KpnI	GGTACC	1 cut(s)	128
KroI	GCCGGC	1 cut(s)	855
KroNI	GCCGGC	1 cut(s)	857
Ksp22I	TGATCA	2 cut(s)	1123, 1171
Kzo9I	GATC	6 cut(s)	1016, 1123, 1144, 1171, 1312, 1360
LmnI	GCTCC	1 cut(s)	775
Lsp1109I	GCAGC	2 cut(s)	356, 562
LweI	GCATC	6 cut(s)	259, 376, 393, 1012, 1119, 1399
MaeI	CTAG	5 cut(s)	152, 443, 1010, 1236, 1289
MaeII	ACGT	1 cut(s)	1340
MaeIII	GTNAC	3 cut(s)	89, 918, 991
MalI	GATC	6 cut(s)	1018, 1125, 1146, 1173, 1314, 1362
MboI	GATC	6 cut(s)	1016, 1123, 1144, 1171, 1312, 1360
MboII	GAAGA	8 cut(s)	364, 367, 530, 958, 1035, 1139, 1253, 1388
MflI	RGATCY	1 cut(s)	1312
MhlI	GDGCHC	2 cut(s)	105, 459
MlsI	TGGCCA	1 cut(s)	554
MluCI	AATT	9 cut(s)	258, 301, 741, 801, 1101, 1157, 1445, 1460, 1558
MluNI	TGGCCA	1 cut(s)	554
MlyI	GAGTC	5 cut(s)	488, 494, 594, 950, 1593
MmeI	TCCRAC	1 cut(s)	924
Mox20I	TGGCCA	1 cut(s)	554
Mph1103I	ATGCAT	1 cut(s)	1436
MroI	TCCGGA	1 cut(s)	1327
MroNI	GCCGGC	1 cut(s)	855
MroXI	GAANNNNTTC	1 cut(s)	965
MscI	TGGCCA	1 cut(s)	554
MseI	TTAA	5 cut(s)	684, 714, 1182, 1463, 1557
MslI	CAYNNNNRTG	1 cut(s)	1429
Msp20I	TGGCCA	1 cut(s)	554
MspCI	CTTAAG	1 cut(s)	713
MspI	CCGG	6 cut(s)	729, 841, 856, 1328, 1489, 1504
MspR9I	CCNGG	4 cut(s)	129, 382, 773, 807
Mva1269I	GAATGC	3 cut(s)	327, 578, 937
MvaI	CCWGG	4 cut(s)	129, 382, 773, 807
MvnI	CGCG	1 cut(s)	900
MwoI	GCNNNNNNNGC	4 cut(s)	74, 463, 784, 1019
NaeI	GCCGGC	1 cut(s)	857
NdeI	CATATG	1 cut(s)	237
NdeII	GATC	6 cut(s)	1016, 1123, 1144, 1171, 1312, 1360
NgoMIV	GCCGGC	1 cut(s)	855
NheI	GCTAGC	1 cut(s)	1288
NlaIII	CATG	2 cut(s)	1434, 1522
NlaIV	GGNNCC	5 cut(s)	103, 126, 733, 777, 1332
NmuCI	GTSAC	1 cut(s)	918
NsiI	ATGCAT	1 cut(s)	1436
NspI	RCATGY	1 cut(s)	1434
PaeI	GCATGC	1 cut(s)	1434
PcsI	WCGNNNNNNNCGW	1 cut(s)	627
PctI	GAATGC	3 cut(s)	327, 578, 937
PdiI	GCCGGC	1 cut(s)	857
PdmI	GAANNNNTTC	1 cut(s)	965
PfeI	GAWTC	4 cut(s)	611, 623, 1416, 1477
PflFI	GACNNNGTC	1 cut(s)	668
PfoI	TCCNGGA	1 cut(s)	771
PkrI	GCNGC	2 cut(s)	346, 577
PleI	GAGTC	5 cut(s)	487, 494, 593, 949, 1592
PpsI	GAGTC	5 cut(s)	487, 494, 593, 949, 1592
Psp6I	CCWGG	4 cut(s)	127, 380, 771, 805
PspGI	CCWGG	4 cut(s)	127, 380, 771, 805
PspN4I	GGNNCC	5 cut(s)	103, 126, 733, 777, 1332
PspOMI	GGGCCC	1 cut(s)	101
PspPI	GGNCC	7 cut(s)	101, 102, 131, 182, 218, 1115, 1421
PsrI	GAACNNNNNNTAC	2 cut(s)	183, 215
PstI	CTGCAG	1 cut(s)	12
PsuI	RGATCY	1 cut(s)	1312
PsyI	GACNNNGTC	1 cut(s)	668
RsaI	GTAC	2 cut(s)	126, 835
RsaNI	GTAC	2 cut(s)	125, 834
RseI	CAYNNNNRTG	1 cut(s)	1429
SalI	GTCGAC	1 cut(s)	397
SaqAI	TTAA	5 cut(s)	684, 714, 1182, 1463, 1557
SatI	GCNGC	2 cut(s)	345, 576
Sau3AI	GATC	6 cut(s)	1016, 1123, 1144, 1171, 1312, 1360
Sau96I	GGNCC	7 cut(s)	101, 102, 131, 182, 218, 1115, 1421
SchI	GAGTC	5 cut(s)	488, 494, 594, 950, 1593
ScrFI	CCNGG	4 cut(s)	129, 382, 773, 807
SduI	GDGCHC	2 cut(s)	105, 459
SfaNI	GCATC	6 cut(s)	259, 376, 393, 1012, 1119, 1399
SfcI	CTRYAG	1 cut(s)	8
SinI	GGWCC	2 cut(s)	182, 1115
SmiMI	CAYNNNNRTG	1 cut(s)	1429
SmlI	CTYRAG	3 cut(s)	713, 972, 1538
SmoI	CTYRAG	3 cut(s)	713, 972, 1538
SphI	GCATGC	1 cut(s)	1434
Sse9I	AATT	9 cut(s)	258, 301, 741, 801, 1101, 1157, 1445, 1460, 1558
SsiI	CCGC	5 cut(s)	515, 900, 989, 1097, 1594
SspMI	CTAG	5 cut(s)	152, 443, 1010, 1236, 1289
StyD4I	CCNGG	4 cut(s)	127, 380, 771, 805
TaaI	ACNGT	3 cut(s)	893, 952, 1051
TaiI	ACGT	1 cut(s)	1343
TaqI	TCGA	7 cut(s)	47, 398, 477, 498, 630, 1080, 1245
TasI	AATT	9 cut(s)	258, 301, 741, 801, 1101, 1157, 1445, 1460, 1558
TfiI	GAWTC	4 cut(s)	611, 623, 1416, 1477
Tru1I	TTAA	5 cut(s)	684, 714, 1182, 1463, 1557
Tru9I	TTAA	5 cut(s)	684, 714, 1182, 1463, 1557
TscAI	CASTG	2 cut(s)	562, 898
TseFI	GTSAC	1 cut(s)	918
TseI	GCWGC	2 cut(s)	344, 575
Tsp45I	GTSAC	1 cut(s)	918
TspDTI	ATGAA	5 cut(s)	224, 463, 899, 944, 1469
TspGWI	ACGGA	1 cut(s)	321
TspRI	CASTG	2 cut(s)	562, 898
Tth111I	GACNNNGTC	1 cut(s)	668
Vha464I	CTTAAG	1 cut(s)	713
VpaK11BI	GGWCC	2 cut(s)	182, 1115
XagI	CCTNNNNNAGG	1 cut(s)	109
XapI	RAATTY	4 cut(s)	301, 801, 1157, 1445
XbaI	TCTAGA	1 cut(s)	1235
XceI	RCATGY	1 cut(s)	1434
XcmI	CCANNNNNNNNNTGG	2 cut(s)	31, 1275
XmiI	GTMKAC	3 cut(s)	244, 398, 1053
XmnI	GAANNNNTTC	1 cut(s)	965
XspI	CTAG	5 cut(s)	152, 443, 1010, 1236, 1289
Zsp2I	ATGCAT	1 cut(s)	1436

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.