pycom15g05420

Cytochrome p450

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
3230126 .. 3232615
2490 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g05420.2

Sequence Viewer

Length: 1206 bp
ATGATTGCTTGGAAGAAGAGGAGACCCTTCAGAAAATTGGTGGGGATGGAAGTGTTGCTTGCTACCAGTGTTTGGTTGATGTCCACAATCTTCACAGGGTTGGCAATATTGGGAGGAATTTTGGGGTACTTGTATGGGCCCTACTGGGGGGTGAGAAGGGTACCTGGCCCACCAACTATCCCCTTGCTAGGACACCTTCCCTTGCTGGCAAAGTATGGTCCTGATGTATTCTCAGTTCTTGCCGAACAGTACGGCCCTATTTTCAGGTTTCATATGGGCAGGCAACCATTGATAATTGTAGCAGATGCTGAGCTTTGTAGAGAAGTTGGAATAAAGAAATTCAAAGACATTCCGAACAGAAGCATTCCAGCTCCCATCTCAGCCTCCCCTCTTCATCAAAAGGGTCTTTTTTTCACTAGGGATGCAAGATGGTCGACAATGCGAAACACTATATTATCGGTGTATCAGCCATCACACCTCGCCAGCCTTGTGCCTACCATGCAGTCCTTCATTGAATCTGCAACTGAGAAACTGCACTCCTCCAAAGAAGAAGAGATTACATTTTCTACCCTTTCCCTCGGATTAGCTACTGATGTACTAGGGCAAGCTGCATTTGGTGTCAACTTTGGCCTTTCTAATACACATTCGATCGGCAAATCAATCAAAAAGATTGACGGAGAAGACAACGACGATGAAGTCTCGGACTTTATCAACCAACATATTTATTCCACAACGCAGCTTAAGATGGACTTCTCAGGTTCCTTATCTATCATACTCGGTTTACTAGTCCCCATACTCCAGGAGCCATTTCGGCAGATTTTGAAGAGAATTCCGGGCACTATGGACTGGAAAGTTGAGCGAACGAACCGGAAGTTGAGTGGCCGGGTTGACGATATTGTGGCGAAGAGAATGAAAGACCGTGAGCGAGGCTCGAAGGACTTCTTGTCGGTAATTATGAATGCAATGGAATCAGAGGCGGTTTCGAAGAATTTCTTCACTCCTGACTACATTAGTGCAGTTACTTACGAGCATCTCCTTGCTGGATCAGCCACCACAGCATTCACATTGTCTTCAATTGTCTACTTGGTTGCTGGACATCCAGAAGTCGAAAAAAAGTTGCTGGCAGAGATTGATGGATTTGGACCGCCTGATCGATCCCAACTGCTCATGATCTTCAACACAAGTTTCCTTACATTGATCAGGTGA

Protein Analysis

402

Amino Acids

44.71

Weight (kDa)

9.18

Isoelectric Point (pI)

33.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 695
Acc65I GGTACC 1 cut(s) 160
AccB1I GGYRCC 1 cut(s) 160
AccB7I CCANNNNNTGG 1 cut(s) 72
AccI GTMKAC 2 cut(s) 434, 1080
AciI CCGC 2 cut(s) 977, 1145
AclWI GGATC 2 cut(s) 1051, 1149
AcoI YGGCCR 1 cut(s) 880
AcsI RAATTY 4 cut(s) 117, 338, 828, 988
AcuI CTGAAG 1 cut(s) 13
AfaI GTAC 4 cut(s) 128, 162, 251, 597
AfiI CCNNNNNNNGG 4 cut(s) 72, 146, 147, 188
AflII CTTAAG 1 cut(s) 740
AgsI TTSAA 5 cut(s) 343, 515, 823, 1074, 1177
AhdI GACNNNNNGTC 1 cut(s) 943
AhlI ACTAGT 1 cut(s) 784
AjnI CCWGG 2 cut(s) 163, 798
AluBI AGCT 5 cut(s) 313, 371, 587, 608, 739
AluI AGCT 5 cut(s) 313, 371, 587, 608, 739
Alw26I GTCTC 2 cut(s) 16, 703
AlwI GGATC 2 cut(s) 1051, 1149
AlwNI CAGNNNCTG 1 cut(s) 308
AoxI GGCC 5 cut(s) 137, 166, 253, 628, 880
ApaI GGGCCC 1 cut(s) 141
ApeKI GCWGC 2 cut(s) 608, 736
ApoI RAATTY 4 cut(s) 117, 338, 828, 988
Asp700I GAANNNNTTC 3 cut(s) 938, 989, 992
Asp718I GGTACC 1 cut(s) 160
AspS9I GGNCC 6 cut(s) 137, 138, 167, 218, 254, 1142
AsuC2I CCSGG 2 cut(s) 834, 884
AsuHPI GGTGA 1 cut(s) 163
AsuII TTCGAA 1 cut(s) 983
AvaII GGWCC 2 cut(s) 218, 1142
BaeGI GKGCMC 2 cut(s) 141, 839
BanI GGYRCC 1 cut(s) 160
BanII GRGCYC 1 cut(s) 141
BbsI GAAGAC 2 cut(s) 687, 1062
BbvI GCAGC 2 cut(s) 595, 748
BccI CCATC 6 cut(s) 40, 383, 423, 478, 739, 1127
BceAI ACGGC 1 cut(s) 268
BcgI CGANNNNNNTGC 2 cut(s) 414, 448
BciT130I CCWGG 2 cut(s) 165, 800
BclI TGATCA 1 cut(s) 1197
BcnI CCSGG 2 cut(s) 834, 884
BcoDI GTCTC 2 cut(s) 16, 703
BcuI ACTAGT 1 cut(s) 784
BfaI CTAG 4 cut(s) 188, 417, 599, 785
BfrI CTTAAG 1 cut(s) 740
BglI GCCNNNNNGGC 1 cut(s) 811
BisI GCNGC 2 cut(s) 609, 737
BlpI GCTNAGC 1 cut(s) 309
BlsI GCNGC 2 cut(s) 610, 738
Bme1390I CCNGG 4 cut(s) 165, 800, 834, 884
Bme18I GGWCC 2 cut(s) 218, 1142
BmeRI GACNNNNNGTC 1 cut(s) 943
BmgT120I GGNCC 6 cut(s) 137, 138, 167, 218, 254, 1142
BmiI GGNNCC 4 cut(s) 139, 162, 760, 804
BmrFI CCNGG 4 cut(s) 165, 800, 834, 884
BmrI ACTGGG 1 cut(s) 154
BmsI GCATC 3 cut(s) 295, 412, 1039
BmuI ACTGGG 1 cut(s) 154
BpiI GAAGAC 2 cut(s) 687, 1062
BplI GAGNNNNNCTC 2 cut(s) 914, 946
BpmI CTGGAG 1 cut(s) 782
Bpu1102I GCTNAGC 1 cut(s) 309
Bpu14I TTCGAA 1 cut(s) 983
BpuMI CCSGG 2 cut(s) 834, 884
Bsa29I ATCGAT 1 cut(s) 1153
BsaI GGTCTC 1 cut(s) 16
BsaJI CCNNGG 1 cut(s) 577
BsaWI WCCGGW 1 cut(s) 867
Bsc4I CCNNNNNNNGG 4 cut(s) 72, 146, 147, 188
Bse1I ACTGG 3 cut(s) 66, 149, 851
Bse3DI GCAATG 1 cut(s) 969
BseBI CCWGG 2 cut(s) 165, 800
BseCI ATCGAT 1 cut(s) 1153
BseDI CCNNGG 1 cut(s) 577
BseGI GGATG 3 cut(s) 51, 427, 1096
BseLI CCNNNNNNNGG 4 cut(s) 72, 146, 147, 188
BseMI GCAATG 1 cut(s) 969
BseMII CTCAG 5 cut(s) 246, 300, 393, 516, 768
BseNI ACTGG 3 cut(s) 66, 149, 851
BseRI GAGGAG 2 cut(s) 34, 529
BseSI GKGCMC 2 cut(s) 141, 839
BseXI GCAGC 2 cut(s) 595, 748
BsgI GTGCAG 2 cut(s) 518, 1035
Bsh1285I CGRYCG 1 cut(s) 651
BshFI GGCC 5 cut(s) 139, 168, 255, 630, 882
BshNI GGYRCC 1 cut(s) 160
BshVI ATCGAT 1 cut(s) 1153
BsiEI CGRYCG 1 cut(s) 651
BsiSI CCGG 3 cut(s) 833, 868, 883
BslFI GGGAC 1 cut(s) 773
BslI CCNNNNNNNGG 4 cut(s) 72, 146, 147, 188
BsmAI GTCTC 2 cut(s) 16, 703
BsmFI GGGAC 1 cut(s) 773
BsmI GAATGC 3 cut(s) 363, 964, 1058
BsnI GGCC 5 cut(s) 139, 168, 255, 630, 882
Bso31I GGTCTC 1 cut(s) 16
Bsp119I TTCGAA 1 cut(s) 983
Bsp120I GGGCCC 1 cut(s) 137
Bsp1286I GDGCHC 2 cut(s) 141, 839
Bsp143I GATC 6 cut(s) 648, 1043, 1150, 1154, 1170, 1197
Bsp1720I GCTNAGC 1 cut(s) 309
BspACI CCGC 2 cut(s) 977, 1145
BspANI GGCC 5 cut(s) 139, 168, 255, 630, 882
BspCNI CTCAG 5 cut(s) 245, 301, 392, 517, 767
BspDI ATCGAT 1 cut(s) 1153
BspHI TCATGA 1 cut(s) 1167
BspLI GGNNCC 4 cut(s) 139, 162, 760, 804
BspPI GGATC 2 cut(s) 1051, 1149
BspT104I TTCGAA 1 cut(s) 983
BspT107I GGYRCC 1 cut(s) 160
BspTI CTTAAG 1 cut(s) 740
BspTNI GGTCTC 1 cut(s) 16
BsrDI GCAATG 1 cut(s) 969
BsrI ACTGG 3 cut(s) 66, 149, 851
BssECI CCNNGG 1 cut(s) 577
BssMI GATC 6 cut(s) 648, 1043, 1150, 1154, 1170, 1197
Bst2UI CCWGG 2 cut(s) 165, 800
Bst4CI ACNGT 2 cut(s) 249, 920
Bst6I CTCTTC 5 cut(s) 11, 396, 546, 818, 899
BstAFI CTTAAG 1 cut(s) 740
BstBI TTCGAA 1 cut(s) 983
BstC8I GCNNGC 6 cut(s) 60, 207, 281, 484, 606, 1122
BstDEI CTNAG 5 cut(s) 232, 309, 379, 525, 754
BstF5I GGATG 3 cut(s) 51, 427, 1096
BstKTI GATC 6 cut(s) 651, 1046, 1153, 1157, 1173, 1200
BstMAI GTCTC 2 cut(s) 16, 703
BstMBI GATC 6 cut(s) 648, 1043, 1150, 1154, 1170, 1197
BstMCI CGRYCG 1 cut(s) 651
BstMWI GCNNNNNNNGC 4 cut(s) 499, 811, 1046, 1055
BstNI CCWGG 2 cut(s) 165, 800
BstSCI CCNGG 4 cut(s) 163, 798, 832, 882
BstSLI GKGCMC 2 cut(s) 141, 839
BstV1I GCAGC 2 cut(s) 595, 748
BstV2I GAAGAC 2 cut(s) 687, 1062
Bsu15I ATCGAT 1 cut(s) 1153
BsuRI GGCC 5 cut(s) 139, 168, 255, 630, 882
BsuTUI ATCGAT 1 cut(s) 1153
BtsCI GGATG 3 cut(s) 51, 427, 1096
BtsIMutI CAGTG 1 cut(s) 73
Cac8I GCNNGC 6 cut(s) 60, 207, 281, 484, 606, 1122
CaiI CAGNNNCTG 1 cut(s) 308
CciI TCATGA 1 cut(s) 1167
Cfr13I GGNCC 6 cut(s) 137, 138, 167, 218, 254, 1142
ClaI ATCGAT 1 cut(s) 1153
Csp6I GTAC 4 cut(s) 127, 161, 250, 596
CviAII CATG 2 cut(s) 499, 1168
CviQI GTAC 4 cut(s) 127, 161, 250, 596
DdeI CTNAG 5 cut(s) 232, 309, 379, 525, 754
DpnI GATC 6 cut(s) 650, 1045, 1152, 1156, 1172, 1199
DpnII GATC 6 cut(s) 648, 1043, 1150, 1154, 1170, 1197
DrdI GACNNNNNNGTC 1 cut(s) 695
DriI GACNNNNNGTC 1 cut(s) 943
DseDI GACNNNNNNGTC 1 cut(s) 695
EaeI YGGCCR 1 cut(s) 880
Eam1104I CTCTTC 5 cut(s) 11, 396, 546, 818, 899
Eam1105I GACNNNNNGTC 1 cut(s) 943
EarI CTCTTC 5 cut(s) 11, 396, 546, 818, 899
Eco24I GRGCYC 1 cut(s) 141
Eco31I GGTCTC 1 cut(s) 16
Eco47I GGWCC 2 cut(s) 218, 1142
Eco57I CTGAAG 1 cut(s) 13
EcoO109I RGGNCCY 1 cut(s) 138
EcoRI GAATTC 1 cut(s) 828
EcoRII CCWGG 2 cut(s) 163, 798
EcoT38I GRGCYC 1 cut(s) 141
FaeI CATG 2 cut(s) 502, 1171
FalI AAGNNNNNCTT 8 cut(s) 42, 74, 734, 766, 926, 958, 977, 1009
FaqI GGGAC 1 cut(s) 773
FatI CATG 2 cut(s) 498, 1167
FauNDI CATATG 1 cut(s) 273
FbaI TGATCA 1 cut(s) 1197
FblI GTMKAC 2 cut(s) 434, 1080
Fnu4HI GCNGC 2 cut(s) 609, 737
FokI GGATG 3 cut(s) 58, 434, 1083
FriOI GRGCYC 1 cut(s) 141
Fsp4HI GCNGC 2 cut(s) 609, 737
FspBI CTAG 4 cut(s) 188, 417, 599, 785
GluI GCNGC 2 cut(s) 609, 737
GsuI CTGGAG 1 cut(s) 782
HaeIII GGCC 5 cut(s) 139, 168, 255, 630, 882
HapII CCGG 3 cut(s) 833, 868, 883
Hin1II CATG 2 cut(s) 502, 1171
HincII GTYRAC 3 cut(s) 435, 622, 889
HindII GTYRAC 3 cut(s) 435, 622, 889
HinfI GANTC 2 cut(s) 515, 968
HpaII CCGG 3 cut(s) 833, 868, 883
HphI GGTGA 1 cut(s) 163
Hpy166II GTNNAC 6 cut(s) 84, 435, 622, 782, 889, 1081
Hpy188I TCNGA 5 cut(s) 32, 354, 581, 703, 973
Hpy188III TCNNGA 4 cut(s) 221, 1001, 1100, 1168
Hpy8I GTNNAC 6 cut(s) 84, 435, 622, 782, 889, 1081
Hpy99I CGWCG 1 cut(s) 692
HpyAV CCTTC 5 cut(s) 37, 150, 206, 517, 928
HpyCH4III ACNGT 2 cut(s) 249, 920
HpyCH4V TGCA 7 cut(s) 425, 502, 521, 535, 611, 962, 1016
HpyF10VI GCNNNNNNNGC 4 cut(s) 499, 811, 1046, 1055
HpyF3I CTNAG 5 cut(s) 232, 309, 379, 525, 754
Hsp92II CATG 2 cut(s) 502, 1171
KpnI GGTACC 1 cut(s) 164
Ksp22I TGATCA 1 cut(s) 1197
Kzo9I GATC 6 cut(s) 648, 1043, 1150, 1154, 1170, 1197
LmnI GCTCC 2 cut(s) 376, 802
Lsp1109I GCAGC 2 cut(s) 595, 748
LweI GCATC 3 cut(s) 295, 412, 1039
MaeI CTAG 4 cut(s) 188, 417, 599, 785
MaeIII GTNAC 1 cut(s) 1018
MalI GATC 6 cut(s) 650, 1045, 1152, 1156, 1172, 1199
MboI GATC 6 cut(s) 648, 1043, 1150, 1154, 1170, 1197
MfeI CAATTG 1 cut(s) 1074
MhlI GDGCHC 2 cut(s) 141, 839
MluCI AATT 8 cut(s) 35, 117, 294, 338, 828, 951, 988, 1074
MmeI TCCRAC 1 cut(s) 307
MnlI CCTC 9 cut(s) 12, 107, 394, 399, 488, 550, 587, 920, 967
MroXI GAANNNNTTC 3 cut(s) 938, 989, 992
MseI TTAA 1 cut(s) 741
MspCI CTTAAG 1 cut(s) 740
MspI CCGG 3 cut(s) 833, 868, 883
MspR9I CCNGG 4 cut(s) 165, 800, 834, 884
MunI CAATTG 1 cut(s) 1074
Mva1269I GAATGC 3 cut(s) 363, 964, 1058
MvaI CCWGG 2 cut(s) 165, 800
MwoI GCNNNNNNNGC 4 cut(s) 499, 811, 1046, 1055
NciI CCSGG 2 cut(s) 834, 884
NdeI CATATG 1 cut(s) 273
NdeII GATC 6 cut(s) 648, 1043, 1150, 1154, 1170, 1197
NlaIII CATG 2 cut(s) 502, 1171
NlaIV GGNNCC 4 cut(s) 139, 162, 760, 804
NspV TTCGAA 1 cut(s) 983
PagI TCATGA 1 cut(s) 1167
PctI GAATGC 3 cut(s) 363, 964, 1058
PdmI GAANNNNTTC 3 cut(s) 938, 989, 992
PfeI GAWTC 2 cut(s) 515, 968
PflMI CCANNNNNTGG 1 cut(s) 72
PfoI TCCNGGA 1 cut(s) 798
PkrI GCNGC 2 cut(s) 610, 738
Ple19I CGATCG 1 cut(s) 651
Psp6I CCWGG 2 cut(s) 163, 798
PspGI CCWGG 2 cut(s) 163, 798
PspN4I GGNNCC 4 cut(s) 139, 162, 760, 804
PspOMI GGGCCC 1 cut(s) 137
PspPI GGNCC 6 cut(s) 137, 138, 167, 218, 254, 1142
PsrI GAACNNNNNNTAC 2 cut(s) 219, 251
PstNI CAGNNNCTG 1 cut(s) 308
PvuI CGATCG 1 cut(s) 651
RsaI GTAC 4 cut(s) 128, 162, 251, 597
RsaNI GTAC 4 cut(s) 127, 161, 250, 596
SalI GTCGAC 1 cut(s) 433
SaqAI TTAA 1 cut(s) 741
SatI GCNGC 2 cut(s) 609, 737
Sau3AI GATC 6 cut(s) 648, 1043, 1150, 1154, 1170, 1197
Sau96I GGNCC 6 cut(s) 137, 138, 167, 218, 254, 1142
ScrFI CCNGG 4 cut(s) 165, 800, 834, 884
SduI GDGCHC 2 cut(s) 141, 839
SfaNI GCATC 3 cut(s) 295, 412, 1039
SfuI TTCGAA 1 cut(s) 983
SinI GGWCC 2 cut(s) 218, 1142
SmlI CTYRAG 1 cut(s) 740
SmoI CTYRAG 1 cut(s) 740
SpeI ACTAGT 1 cut(s) 784
Sse9I AATT 8 cut(s) 35, 117, 294, 338, 828, 951, 988, 1074
SsiI CCGC 2 cut(s) 977, 1145
SspI AATATT 1 cut(s) 108
SspMI CTAG 4 cut(s) 188, 417, 599, 785
StyD4I CCNGG 4 cut(s) 163, 798, 832, 882
TaaI ACNGT 2 cut(s) 249, 920
TaqI TCGA 6 cut(s) 434, 647, 932, 983, 1107, 1153
TasI AATT 8 cut(s) 35, 117, 294, 338, 828, 951, 988, 1074
TatI WGTACW 1 cut(s) 595
TfiI GAWTC 2 cut(s) 515, 968
Tru1I TTAA 1 cut(s) 741
Tru9I TTAA 1 cut(s) 741
TscAI CASTG 1 cut(s) 73
TseI GCWGC 2 cut(s) 608, 736
TspDTI ATGAA 6 cut(s) 260, 383, 499, 708, 926, 971
TspGWI ACGGA 1 cut(s) 690
TspRI CASTG 1 cut(s) 73
Van91I CCANNNNNTGG 1 cut(s) 72
Vha464I CTTAAG 1 cut(s) 740
VpaK11BI GGWCC 2 cut(s) 218, 1142
XapI RAATTY 4 cut(s) 117, 338, 828, 988
XmiI GTMKAC 2 cut(s) 434, 1080
XmnI GAANNNNTTC 3 cut(s) 938, 989, 992
XspI CTAG 4 cut(s) 188, 417, 599, 785
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.