FvH4_2g31680

Cytochrome p450

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
24240798 .. 24243965
3168 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g31680.t2

Sequence Viewer

Length: 1203 bp
ATGGGGATGGAGTTTTTGATTACCAATGGTTCTCTGGTGTCAACCATTTTCACAGTGCTGGCAGTATTGGCTGGAGTCTTGGGATACTTGTATGCACCATACTGGGGAGTGAGAAGGGTTCCTGGCCCACGAACTATCCCTTTTCTAGGACACCTTCCCTTGCTGGCTAAGCATGGTCCTGATTTGTTCTCAGTTCTTGCCAAGCAATATGGCCCTATCTTCAGGTTTCATATGGGAAGGCAGCCACTTATAATTGTAGCAGATGCAGAACTTTGTAGAGAAGTTGGAATCAAGAAATTCAAAGACATTCCAAACAGAAGCATACCATCTCCAATCTCAGCCTCACCTCTTCACCAAAAGGGTCTCTTTTTCACCAGGGATATAAGATGGTCAACCATGAGAAACACCATTTTATCAGTGTATCAACCTTCATACCTAGCCAGCCTTGTTCCCACCATGCAATCATATATTGAATCTGCAACTCAAAACCTTGATGACTCTTCCAACAAGGAAGACATTACCTTTTCAAACCTCTCACTCAGATTGGCCACTGATGTTATTGGACAAGCTTCCTTTGGTGTCGACTTTGGCCTTTCAAAACCACAGTCTATTAGTAATTCAATCAACAAGGTTGATAATGGTGAAGACAAGAATGATGATGAAGTTTCAGATTTTATCAACCAACACATCTATTCCACAACTCAGCTTAAGATGGACTTATCAGGTTCCTTATCAATCATATTGGGACTACTTGTCCCCATAATACAAGAGCCATTTAGGCAAATCTTGAAGAGAATTCCGGGCACTATGGACTGGAAAGTAGACCGGACTAACCAGAATTTGGCAGGCCGGCTTGATCAGATTGTAATGAGGAGAATGAAAGATAGCGATCGAGGTACCAAGAATTTCTTGTCACTCATAATGAATGCAAGGGAGTCAGAGGGGGTAGCAAAGAGTGTGTTCACTCCAGACTACATTAGTGCAGTCACTTATGAACATTTGCTTGCTGGGTCGGCCACCACATCTTTTACATTGTCCTCAGCTGTTTACTTGATTTCTGGACACCCGGAAGTGGAAAGCAAGTTGCTAGCAGAAATCGATGGATTTGGTCCACATGATCAGATCCCAACAGCTCCTGATCTTCAGCACAAATTCCCTTATCTTGAACAGGTAAGTAGCATGAAACAAGAGCTAATCAAGTAG

Protein Analysis

401

Amino Acids

44.48

Weight (kDa)

6.76

Isoelectric Point (pI)

32.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 41 - 522 3.6e-84 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 251
Acc65I GGTACC 1 cut(s) 896
AccB1I GGYRCC 1 cut(s) 896
AccB7I CCANNNNNTGG 1 cut(s) 841
AccI GTMKAC 2 cut(s) 582, 822
AclWI GGATC 1 cut(s) 1117
AcoI YGGCCR 2 cut(s) 546, 1014
AcsI RAATTY 5 cut(s) 296, 795, 838, 904, 1151
AcuI CTGAAG 2 cut(s) 205, 1127
AfaI GTAC 1 cut(s) 898
AfiI CCNNNNNNNGG 4 cut(s) 104, 146, 841, 1072
AflII CTTAAG 1 cut(s) 707
AgsI TTSAA 7 cut(s) 301, 473, 528, 597, 621, 790, 1166
AhdI GACNNNNNGTC 1 cut(s) 752
AjnI CCWGG 2 cut(s) 121, 374
AluBI AGCT 5 cut(s) 569, 706, 1043, 1133, 1192
AluI AGCT 5 cut(s) 569, 706, 1043, 1133, 1192
Alw26I GTCTC 1 cut(s) 368
AlwI GGATC 1 cut(s) 1117
AlwNI CAGNNNCTG 1 cut(s) 1136
AoxI GGCC 6 cut(s) 124, 211, 546, 589, 847, 1014
ApeKI GCWGC 1 cut(s) 241
ApoI RAATTY 5 cut(s) 296, 795, 838, 904, 1151
ArsI GACNNNNNNTTYG 2 cut(s) 590, 622
Asp718I GGTACC 1 cut(s) 896
AspS9I GGNCC 4 cut(s) 125, 176, 212, 1109
AsuC2I CCSGG 2 cut(s) 801, 1067
AsuHPI GGTGA 4 cut(s) 336, 344, 364, 653
AsuNHI GCTAGC 1 cut(s) 1087
AvaII GGWCC 2 cut(s) 176, 1109
BaeGI GKGCMC 1 cut(s) 806
BalI TGGCCA 1 cut(s) 548
BanI GGYRCC 1 cut(s) 896
BbsI GAAGAC 2 cut(s) 519, 651
BbvCI CCTCAGC 1 cut(s) 1039
BbvI GCAGC 1 cut(s) 253
BccI CCATC 4 cut(s) 334, 381, 706, 1094
BciT130I CCWGG 2 cut(s) 123, 376
BciVI GTATCC 1 cut(s) 77
BclI TGATCA 2 cut(s) 856, 1117
BcnI CCSGG 2 cut(s) 801, 1067
BcoDI GTCTC 1 cut(s) 368
BfaI CTAG 3 cut(s) 146, 437, 1088
BfrI CTTAAG 1 cut(s) 707
BfuI GTATCC 1 cut(s) 77
BglI GCCNNNNNGGC 1 cut(s) 778
BisI GCNGC 1 cut(s) 242
BlpI GCTNAGC 1 cut(s) 168
BlsI GCNGC 1 cut(s) 243
Bme1390I CCNGG 4 cut(s) 123, 376, 801, 1067
Bme18I GGWCC 2 cut(s) 176, 1109
BmeRI GACNNNNNGTC 1 cut(s) 752
BmgT120I GGNCC 4 cut(s) 125, 176, 212, 1109
BmiI GGNNCC 3 cut(s) 120, 727, 898
BmrFI CCNGG 4 cut(s) 123, 376, 801, 1067
BmrI ACTGGG 1 cut(s) 112
BmsI GCATC 1 cut(s) 253
BmtI GCTAGC 1 cut(s) 1091
BmuI ACTGGG 1 cut(s) 112
BpiI GAAGAC 2 cut(s) 519, 651
BpmI CTGGAG 2 cut(s) 93, 951
Bpu10I CCTNAGC 1 cut(s) 1039
Bpu1102I GCTNAGC 1 cut(s) 168
BpuMI CCSGG 2 cut(s) 801, 1067
Bsa29I ATCGAT 1 cut(s) 1098
BsaBI GATNNNNATC 1 cut(s) 888
BsaI GGTCTC 1 cut(s) 368
BsaJI CCNNGG 1 cut(s) 375
BsaWI WCCGGW 1 cut(s) 825
Bsc4I CCNNNNNNNGG 4 cut(s) 104, 146, 841, 1072
Bse118I RCCGGY 1 cut(s) 849
Bse1I ACTGG 2 cut(s) 107, 818
Bse8I GATNNNNATC 1 cut(s) 888
BseBI CCWGG 2 cut(s) 123, 376
BseCI ATCGAT 1 cut(s) 1098
BseDI CCNNGG 1 cut(s) 375
BseGI GGATG 1 cut(s) 12
BseJI GATNNNNATC 1 cut(s) 888
BseLI CCNNNNNNNGG 4 cut(s) 104, 146, 841, 1072
BseMII CTCAG 5 cut(s) 204, 351, 553, 716, 1053
BseNI ACTGG 2 cut(s) 107, 818
BseRI GAGGAG 1 cut(s) 886
BseSI GKGCMC 1 cut(s) 806
BseXI GCAGC 1 cut(s) 253
BseYI CCCAGC 1 cut(s) 1007
BsgI GTGCAG 1 cut(s) 1002
Bsh1285I CGRYCG 1 cut(s) 892
BshFI GGCC 6 cut(s) 126, 213, 548, 591, 849, 1016
BshNI GGYRCC 1 cut(s) 896
BshVI ATCGAT 1 cut(s) 1098
BsiEI CGRYCG 1 cut(s) 892
BsiSI CCGG 4 cut(s) 800, 826, 850, 1067
BslFI GGGAC 2 cut(s) 740, 759
BslI CCNNNNNNNGG 4 cut(s) 104, 146, 841, 1072
BsmAI GTCTC 1 cut(s) 368
BsmFI GGGAC 2 cut(s) 740, 759
BsmI GAATGC 1 cut(s) 931
BsnI GGCC 6 cut(s) 126, 213, 548, 591, 849, 1016
Bso31I GGTCTC 1 cut(s) 368
Bsp1286I GDGCHC 1 cut(s) 806
Bsp143I GATC 5 cut(s) 856, 889, 1117, 1122, 1138
Bsp1720I GCTNAGC 1 cut(s) 168
BspANI GGCC 6 cut(s) 126, 213, 548, 591, 849, 1016
BspCNI CTCAG 5 cut(s) 203, 350, 552, 715, 1052
BspDI ATCGAT 1 cut(s) 1098
BspLI GGNNCC 3 cut(s) 120, 727, 898
BspOI GCTAGC 1 cut(s) 1091
BspPI GGATC 1 cut(s) 1117
BspT107I GGYRCC 1 cut(s) 896
BspTI CTTAAG 1 cut(s) 707
BspTNI GGTCTC 1 cut(s) 368
BsrFI RCCGGY 1 cut(s) 849
BsrI ACTGG 2 cut(s) 107, 818
BssAI RCCGGY 1 cut(s) 849
BssECI CCNNGG 1 cut(s) 375
BssMI GATC 5 cut(s) 856, 889, 1117, 1122, 1138
Bst2UI CCWGG 2 cut(s) 123, 376
Bst4CI ACNGT 2 cut(s) 55, 606
Bst6I CTCTTC 3 cut(s) 354, 505, 785
BstAFI CTTAAG 1 cut(s) 707
BstC8I GCNNGC 7 cut(s) 60, 165, 442, 847, 851, 1005, 1089
BstDEI CTNAG 6 cut(s) 168, 190, 337, 539, 702, 1039
BstENI CCTNNNNNAGG 1 cut(s) 144
BstF5I GGATG 1 cut(s) 12
BstKTI GATC 5 cut(s) 859, 892, 1120, 1125, 1141
BstMAI GTCTC 1 cut(s) 368
BstMBI GATC 5 cut(s) 856, 889, 1117, 1122, 1138
BstMCI CGRYCG 1 cut(s) 892
BstMWI GCNNNNNNNGC 4 cut(s) 68, 169, 778, 1013
BstNI CCWGG 2 cut(s) 123, 376
BstSCI CCNGG 4 cut(s) 121, 374, 799, 1065
BstSLI GKGCMC 1 cut(s) 806
BstV1I GCAGC 1 cut(s) 253
BstV2I GAAGAC 2 cut(s) 519, 651
BstX2I RGATCY 1 cut(s) 1122
BstYI RGATCY 1 cut(s) 1122
Bsu15I ATCGAT 1 cut(s) 1098
BsuI GTATCC 1 cut(s) 77
BsuRI GGCC 6 cut(s) 126, 213, 548, 591, 849, 1016
BsuTUI ATCGAT 1 cut(s) 1098
BtsCI GGATG 1 cut(s) 12
BtsIMutI CAGTG 3 cut(s) 60, 423, 549
Cac8I GCNNGC 7 cut(s) 60, 165, 442, 847, 851, 1005, 1089
CaiI CAGNNNCTG 1 cut(s) 1136
Cfr10I RCCGGY 1 cut(s) 849
Cfr13I GGNCC 4 cut(s) 125, 176, 212, 1109
ClaI ATCGAT 1 cut(s) 1098
Csp6I GTAC 1 cut(s) 897
CviAII CATG 5 cut(s) 173, 397, 457, 1115, 1180
CviQI GTAC 1 cut(s) 897
DdeI CTNAG 6 cut(s) 168, 190, 337, 539, 702, 1039
DpnI GATC 5 cut(s) 858, 891, 1119, 1124, 1140
DpnII GATC 5 cut(s) 856, 889, 1117, 1122, 1138
DriI GACNNNNNGTC 1 cut(s) 752
EaeI YGGCCR 2 cut(s) 546, 1014
Eam1104I CTCTTC 3 cut(s) 354, 505, 785
Eam1105I GACNNNNNGTC 1 cut(s) 752
EarI CTCTTC 3 cut(s) 354, 505, 785
Eco31I GGTCTC 1 cut(s) 368
Eco47I GGWCC 2 cut(s) 176, 1109
Eco57I CTGAAG 2 cut(s) 205, 1127
EcoNI CCTNNNNNAGG 1 cut(s) 144
EcoRI GAATTC 1 cut(s) 795
EcoRII CCWGG 2 cut(s) 121, 374
FaeI CATG 5 cut(s) 176, 400, 460, 1118, 1183
FalI AAGNNNNNCTT 6 cut(s) 350, 382, 701, 733, 893, 925
FaqI GGGAC 2 cut(s) 740, 759
FatI CATG 5 cut(s) 172, 396, 456, 1114, 1179
FauNDI CATATG 1 cut(s) 231
FbaI TGATCA 2 cut(s) 856, 1117
FblI GTMKAC 2 cut(s) 582, 822
Fnu4HI GCNGC 1 cut(s) 242
FokI GGATG 1 cut(s) 19
Fsp4HI GCNGC 1 cut(s) 242
FspBI CTAG 3 cut(s) 146, 437, 1088
GluI GCNGC 1 cut(s) 242
GsaI CCCAGC 1 cut(s) 1011
GsuI CTGGAG 2 cut(s) 93, 951
HaeIII GGCC 6 cut(s) 126, 213, 548, 591, 849, 1016
HapII CCGG 4 cut(s) 800, 826, 850, 1067
Hin1II CATG 5 cut(s) 176, 400, 460, 1118, 1183
HincII GTYRAC 3 cut(s) 42, 393, 583
HindII GTYRAC 3 cut(s) 42, 393, 583
HindIII AAGCTT 1 cut(s) 567
HinfI GANTC 5 cut(s) 75, 288, 473, 497, 935
HpaII CCGG 4 cut(s) 800, 826, 850, 1067
HphI GGTGA 4 cut(s) 336, 344, 364, 653
Hpy166II GTNNAC 7 cut(s) 42, 393, 583, 823, 963, 1048, 1112
Hpy188I TCNGA 5 cut(s) 542, 670, 861, 940, 1122
Hpy188III TCNNGA 7 cut(s) 179, 292, 787, 968, 1059, 1136, 1163
Hpy8I GTNNAC 7 cut(s) 42, 393, 583, 823, 963, 1048, 1112
HpyAV CCTTC 4 cut(s) 108, 164, 231, 438
HpyCH4III ACNGT 2 cut(s) 55, 606
HpyCH4V TGCA 6 cut(s) 95, 266, 460, 479, 929, 983
HpyF10VI GCNNNNNNNGC 4 cut(s) 68, 169, 778, 1013
HpyF3I CTNAG 6 cut(s) 168, 190, 337, 539, 702, 1039
Hsp92II CATG 5 cut(s) 176, 400, 460, 1118, 1183
KpnI GGTACC 1 cut(s) 900
KroI GCCGGC 1 cut(s) 849
KroNI GCCGGC 1 cut(s) 851
Ksp22I TGATCA 2 cut(s) 856, 1117
Kzo9I GATC 5 cut(s) 856, 889, 1117, 1122, 1138
LmnI GCTCC 1 cut(s) 1138
Lsp1109I GCAGC 1 cut(s) 253
LweI GCATC 1 cut(s) 253
MaeI CTAG 3 cut(s) 146, 437, 1088
MaeIII GTNAC 2 cut(s) 912, 985
MalI GATC 5 cut(s) 858, 891, 1119, 1124, 1140
MboI GATC 5 cut(s) 856, 889, 1117, 1122, 1138
MboII GAAGA 7 cut(s) 211, 341, 492, 524, 656, 802, 1133
MflI RGATCY 1 cut(s) 1122
MhlI GDGCHC 1 cut(s) 806
MlsI TGGCCA 1 cut(s) 548
MluCI AATT 7 cut(s) 252, 296, 616, 795, 838, 904, 1151
MluNI TGGCCA 1 cut(s) 548
MlyI GAGTC 3 cut(s) 84, 491, 944
MmeI TCCRAC 2 cut(s) 265, 528
MnlI CCTC 7 cut(s) 352, 357, 542, 864, 887, 934, 1048
Mox20I TGGCCA 1 cut(s) 548
MroNI GCCGGC 1 cut(s) 849
MscI TGGCCA 1 cut(s) 548
MseI TTAA 1 cut(s) 708
Msp20I TGGCCA 1 cut(s) 548
MspA1I CMGCKG 1 cut(s) 1043
MspCI CTTAAG 1 cut(s) 707
MspI CCGG 4 cut(s) 800, 826, 850, 1067
MspR9I CCNGG 4 cut(s) 123, 376, 801, 1067
Mva1269I GAATGC 1 cut(s) 931
MvaI CCWGG 2 cut(s) 123, 376
MwoI GCNNNNNNNGC 4 cut(s) 68, 169, 778, 1013
NaeI GCCGGC 1 cut(s) 851
NciI CCSGG 2 cut(s) 801, 1067
NdeI CATATG 1 cut(s) 231
NdeII GATC 5 cut(s) 856, 889, 1117, 1122, 1138
NgoMIV GCCGGC 1 cut(s) 849
NheI GCTAGC 1 cut(s) 1087
NlaIII CATG 5 cut(s) 176, 400, 460, 1118, 1183
NlaIV GGNNCC 3 cut(s) 120, 727, 898
NmuCI GTSAC 2 cut(s) 912, 985
PctI GAATGC 1 cut(s) 931
PdiI GCCGGC 1 cut(s) 851
PfeI GAWTC 2 cut(s) 288, 473
PflMI CCANNNNNTGG 1 cut(s) 841
PkrI GCNGC 1 cut(s) 243
Ple19I CGATCG 1 cut(s) 892
PleI GAGTC 3 cut(s) 83, 491, 943
PpsI GAGTC 3 cut(s) 83, 491, 943
PsiI TTATAA 1 cut(s) 251
Psp6I CCWGG 2 cut(s) 121, 374
PspFI CCCAGC 1 cut(s) 1007
PspGI CCWGG 2 cut(s) 121, 374
PspN4I GGNNCC 3 cut(s) 120, 727, 898
PspPI GGNCC 4 cut(s) 125, 176, 212, 1109
PstNI CAGNNNCTG 1 cut(s) 1136
PsuI RGATCY 1 cut(s) 1122
PvuI CGATCG 1 cut(s) 892
PvuII CAGCTG 1 cut(s) 1043
RsaI GTAC 1 cut(s) 898
RsaNI GTAC 1 cut(s) 897
SalI GTCGAC 1 cut(s) 581
SaqAI TTAA 1 cut(s) 708
SatI GCNGC 1 cut(s) 242
Sau3AI GATC 5 cut(s) 856, 889, 1117, 1122, 1138
Sau96I GGNCC 4 cut(s) 125, 176, 212, 1109
SchI GAGTC 3 cut(s) 84, 491, 944
ScrFI CCNGG 4 cut(s) 123, 376, 801, 1067
SduI GDGCHC 1 cut(s) 806
SfaNI GCATC 1 cut(s) 253
SinI GGWCC 2 cut(s) 176, 1109
SmlI CTYRAG 1 cut(s) 707
SmoI CTYRAG 1 cut(s) 707
Sse9I AATT 7 cut(s) 252, 296, 616, 795, 838, 904, 1151
SspMI CTAG 3 cut(s) 146, 437, 1088
StyD4I CCNGG 4 cut(s) 121, 374, 799, 1065
TaaI ACNGT 2 cut(s) 55, 606
TaqI TCGA 3 cut(s) 582, 892, 1098
TasI AATT 7 cut(s) 252, 296, 616, 795, 838, 904, 1151
TfiI GAWTC 2 cut(s) 288, 473
Tru1I TTAA 1 cut(s) 708
Tru9I TTAA 1 cut(s) 708
TscAI CASTG 3 cut(s) 60, 423, 556
TseFI GTSAC 2 cut(s) 912, 985
TseI GCWGC 1 cut(s) 241
Tsp45I GTSAC 2 cut(s) 912, 985
TspDTI ATGAA 7 cut(s) 218, 420, 675, 893, 938, 1008, 1196
TspRI CASTG 3 cut(s) 60, 423, 556
Van91I CCANNNNNTGG 1 cut(s) 841
Vha464I CTTAAG 1 cut(s) 707
VpaK11BI GGWCC 2 cut(s) 176, 1109
XagI CCTNNNNNAGG 1 cut(s) 144
XapI RAATTY 5 cut(s) 296, 795, 838, 904, 1151
XcmI CCANNNNNNNNNTGG 1 cut(s) 31
XmiI GTMKAC 2 cut(s) 582, 822
XspI CTAG 3 cut(s) 146, 437, 1088
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.