AT2G29040

Exostosin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0015061
Physical Location & Seq
Reverse (-)
12472206 .. 12475236
3031 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G29040.1

Sequence Viewer

Length: 2193 bp
ATGAGAAAACCACATAGGAGAGGAGGAACAATGGCAATGGAGAAGTCTAGCTCAAAGTACAGAACCCAGTTCTGGTACGTGGCAATGGCCTCATTCCTCCTTTGGCTTGTCTTGCTTTACCTTTTTAGTTCTTCCGCTAAAACCGTTCATAACCACGAGAGATTGTTCCGGCAAGAAAATATCATCGATCTCCCTGTCGAAAACGTCCCACAAAACCACGAACCTGATGAAGCTCCTGTCGTTAACGTTGTCTCTGAGGACATTTCCGTTGATAACAGCTCTCTTCCTGTTTCTGTCGATTCTCCTCCGGATGATCAGATGTCAGAAGACAAGAAGGTTGTGACTGATCTCGTTGAAGAACTTGAGAAAGAAAGGGTTGAAAATGAGAAGAAGAGAGTTGATTCGGTTGTAATTGGACGGTCATCTAAGGCAAGGAGAGGACATCGAGAGCCACGAAAGGCGAGATCTTCGGGTAGATTGGAGGCAGAGAAGAAAAGGGTTCGTCGTAATGATGCTGATGAGAGCAATGCGGAGAATAGTGATGAGAATCATCAAGCATTAGACAAAGAACCGAACTTTTTCGAGGCTAAGAAAGACGTGGAACCAAAGAAAGCGCTAGTTGATGATAATGACGACGATCTTGAGACCAAGAGAGGCAAGGAGTTGCCGAATGATTCTTCCAGTAATGTTGTTGAAGATGATAATGACGACGATCTTGAGACCAAGAAAGGCAAGGATAACATCTCTAAATCTGAACCAAAAACTCAGAGAAATTTTGTATTGAATAAGAATAATACTTCCAAGGCGAAAAACAGAGTAATTTCCAAGAGAAACCAACCTAGTAGAGTCGGTAAAGTTATGTTACGGCCAAGAGAAACGCGAAGTAACGATCCATGTAAAGGAAAATATGTGTATATGCATGAGGTGCCAGCTTTGTTTAACGAAGAGCTTCTCAAGAACTGTTGGACATTGAGCAGGTGGACTGATATGTGCGAGTTAACGTCGAATTTCGGGTTAGGCCCTCGTCTACCAAACATGGAAGGAGTTTCTGGTTGGTATGCCACAAACCAGTTCACATTGGAAGTAATATTCCACAACAGGATGAAGCAGTACAAGTGCTTGACCAAAGACTCGTCTTTAGCTTCTGCGGTGTATGTTCCTTACTATCCGGGTTTAGACTTGATGCGGTTTTTGTGGGGACCGTTCCCTTTCATGAGAGATGCTGCCGCGCTTGATCTCATGAAGTGGCTGAGGGAGAGTCAGGAGTGGAAGAGGATGGACGGACGAGATCATTTTATGGTGGCTGGTCGAACCACTTGGGACTTTATGCGTACACCAGAGAATGAATCCGATTGGGGAAATAGGTTAATGATATTACCGGAAGTAAGAAACATGACGATGCTACTAATCGAATCAAGCCCATGGAACTACCACGGGTTCGCGGTTCCTTACCCGACCTATTTCCACCCTTCAACATACGCAGAAATCATCCAATGGCAGATGAGAATGAGAAGAATTAATCGTCGTTACTTATTCTCATTTGTCGGTGCCCCACGACCAAACCTCGGTGACAGCATAAGAACCGAGATCATGGACCAATGCAAAGCTTCAAAACGAAAATGCAAGCTTCTAGAATGCATATCGGGTTCTCAAAAATGCTACAAACCCGACCAAATCATGAAATTCTTTTTGAGCTCAACGTTCTGTCTTCAACCACCAGGTGACTCATACACACGTCGCTCCACTTTTGACTCCATCTTAGCAGGTTGTATACCAGTTTTCTTTCATCCGGGATCAGCTTATGCGCAATACATTTGGCATTTACCGAAAGATATCGCGAAATACTCTGTTTTTATTCCGGAGAAAAATGTGAAAGAAGGTAAAGTGAGTATAGAGAATGTTTTGAGTAGAATACCGAGGACAAAAGTTTTCGCTATGAGAGAACAAGTGATAAGACTGATACCGAGGTTAATGTATTTTCACCCGTCGAGTAAGAGTGAAGACACGGGAAGGTTTGAAGATGCATTCGATGTCGCGGTGGAAGGAGTTTTGGAAAGAGTGGAGGGGTTAAGGAAGAGGATAGAGGAAGGCAAGGAGGAGATTTTTGATTTTCCGGAGCAGTATTCTTGGAAATATAATGTGTTTGGGAATGTTGAGAGGCATGAGTGGGATCCTTACTTCGATCGGCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Exostosin

Protein Analysis

730

Amino Acids

85.15

Weight (kDa)

8.42

Isoelectric Point (pI)

51.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exostosin_GT47 PF03016 299 - 634 7.7e-82 Exostosin GT47 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G29040
fragaria_vesca FvH4_3g36470
malus_domestica MD03G1090400.v1.1 MD11G1100100.v1.1
prunus_persica Prupe.6G074500_v2.0.a1
pyrus_communis pycom11g08430
rosa_chinensis RchiOBHm_Chr5g0065321
rosa_laevigata RLG00000035783
rosa_multiflora Rmu_sc0010875.1_g000002
rosa_roxburghii Rroxscaffold_1G00015860
rosa_rugosa Rorug05G0371200
rosa_samantha Rh5AG429100 Rh5BG444400 Rh5CG466700 Rh5DG456700
rosa_wichuraiana Rw5G040280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 966
Acc16I TGCGCA 1 cut(s) 1806
Acc36I ACCTGC 2 cut(s) 966, 1754
AccB1I GGYRCC 2 cut(s) 925, 1547
AccI GTMKAC 2 cut(s) 1027, 1771
AccII CGCG 5 cut(s) 880, 1229, 1442, 1838, 2036
AccIII TCCGGA 3 cut(s) 307, 1858, 2113
AciI CCGC 7 cut(s) 135, 530, 1148, 1186, 1227, 1442, 2036
AclI AACGTT 2 cut(s) 246, 1700
AclWI GGATC 4 cut(s) 884, 1801, 2165, 2178
AcoI YGGCCR 1 cut(s) 866
AcsI RAATTY 3 cut(s) 772, 1006, 1682
AdeI CACNNNGTG 1 cut(s) 1721
AfaI GTAC 4 cut(s) 59, 77, 1112, 1333
AfeI AGCGCT 1 cut(s) 615
AfiI CCNNNNNNNGG 3 cut(s) 72, 899, 1565
AflIII ACRYGT 1 cut(s) 1733
AgsI TTSAA 8 cut(s) 356, 380, 695, 784, 1473, 1611, 1712, 2018
AjiI CACGTC 2 cut(s) 598, 1736
AjnI CCWGG 1 cut(s) 1717
Alw21I GWGCWC 1 cut(s) 1697
Alw26I GTCTC 3 cut(s) 256, 638, 713
AlwI GGATC 4 cut(s) 884, 1801, 2165, 2178
Aor13HI TCCGGA 3 cut(s) 307, 1858, 2113
Aor51HI AGCGCT 1 cut(s) 615
AoxI GGCC 4 cut(s) 87, 866, 1018, 2186
ApeKI GCWGC 1 cut(s) 1223
ApoI RAATTY 3 cut(s) 772, 1006, 1682
AseI ATTAAT 1 cut(s) 1518
Asp700I GAANNNNTTC 2 cut(s) 578, 948
AspLEI GCGC 3 cut(s) 616, 1231, 1807
AspS9I GGNCC 3 cut(s) 1019, 1199, 1594
AsuC2I CCSGG 2 cut(s) 1170, 1791
AsuHPI GGTGA 3 cut(s) 1580, 1733, 1973
AvaII GGWCC 2 cut(s) 1199, 1594
BaeGI GKGCMC 1 cut(s) 1552
BaeI ACNNNNGTAYC 2 cut(s) 1952, 1985
BamHI GGATCC 1 cut(s) 2170
BanI GGYRCC 2 cut(s) 925, 1547
BanII GRGCYC 1 cut(s) 1697
BauI CACGAG 1 cut(s) 155
BbsI GAAGAC 3 cut(s) 333, 1700, 2007
Bbv12I GWGCWC 1 cut(s) 1697
BbvCI CCTCAGC 1 cut(s) 1250
BbvI GCAGC 1 cut(s) 1210
BccI CCATC 2 cut(s) 1270, 1763
BceAI ACGGC 1 cut(s) 881
BciT130I CCWGG 1 cut(s) 1719
BclI TGATCA 1 cut(s) 313
BcnI CCSGG 2 cut(s) 1170, 1791
BcoDI GTCTC 3 cut(s) 256, 638, 713
BfaI CTAG 4 cut(s) 48, 617, 840, 1631
BfoI RGCGCY 1 cut(s) 617
BfuAI ACCTGC 2 cut(s) 966, 1754
BglII AGATCT 1 cut(s) 464
BisI GCNGC 2 cut(s) 1224, 1227
BlsI GCNGC 2 cut(s) 1225, 1228
Bme1390I CCNGG 3 cut(s) 1170, 1719, 1791
Bme18I GGWCC 2 cut(s) 1199, 1594
BmgBI CACGTC 2 cut(s) 598, 1736
BmgT120I GGNCC 3 cut(s) 1019, 1199, 1594
BmiI GGNNCC 6 cut(s) 603, 927, 1200, 1446, 1549, 2172
BmrFI CCNGG 3 cut(s) 1170, 1719, 1791
BmrI ACTGGG 1 cut(s) 61
BmsI GCATC 5 cut(s) 502, 1173, 1210, 1389, 2011
BmuI ACTGGG 1 cut(s) 61
BpiI GAAGAC 3 cut(s) 333, 1700, 2007
Bpu10I CCTNAGC 1 cut(s) 1250
BpuEI CTTGAG 4 cut(s) 383, 662, 737, 938
BpuMI CCSGG 2 cut(s) 1170, 1791
Bsa29I ATCGAT 1 cut(s) 186
BsaAI YACGTR 1 cut(s) 79
BsaBI GATNNNNATC 1 cut(s) 546
BsaI GGTCTC 2 cut(s) 638, 713
BsaJI CCNNGG 6 cut(s) 801, 1421, 1432, 1564, 1916, 1964
BsaWI WCCGGW 4 cut(s) 307, 1378, 1858, 2113
Bsc4I CCNNNNNNNGG 3 cut(s) 72, 899, 1565
Bse1I ACTGG 4 cut(s) 67, 681, 1069, 1775
Bse3DI GCAATG 3 cut(s) 42, 90, 532
Bse8I GATNNNNATC 1 cut(s) 546
BseAI TCCGGA 3 cut(s) 307, 1858, 2113
BseBI CCWGG 1 cut(s) 1719
BseCI ATCGAT 1 cut(s) 186
BseDI CCNNGG 6 cut(s) 801, 1421, 1432, 1564, 1916, 1964
BseGI GGATG 5 cut(s) 316, 1107, 1281, 1488, 1786
BseJI GATNNNNATC 1 cut(s) 546
BseLI CCNNNNNNNGG 3 cut(s) 72, 899, 1565
BseMI GCAATG 3 cut(s) 42, 90, 532
BseMII CTCAG 3 cut(s) 246, 779, 1241
BseNI ACTGG 4 cut(s) 67, 681, 1069, 1775
BseRI GAGGAG 3 cut(s) 36, 294, 2111
BseSI GKGCMC 1 cut(s) 1552
BseXI GCAGC 1 cut(s) 1210
Bsh1236I CGCG 5 cut(s) 880, 1229, 1442, 1838, 2036
Bsh1285I CGRYCG 1 cut(s) 2185
BshFI GGCC 4 cut(s) 89, 868, 1020, 2188
BshNI GGYRCC 2 cut(s) 925, 1547
BshVI ATCGAT 1 cut(s) 186
BsiEI CGRYCG 1 cut(s) 2185
BsiHKAI GWGCWC 1 cut(s) 1697
BsiSI CCGG 7 cut(s) 169, 308, 1169, 1379, 1790, 1859, 2114
BslFI GGGAC 3 cut(s) 191, 1212, 1334
BslI CCNNNNNNNGG 3 cut(s) 72, 899, 1565
BsmAI GTCTC 3 cut(s) 256, 638, 713
BsmFI GGGAC 3 cut(s) 191, 1212, 1334
BsmI GAATGC 2 cut(s) 1640, 2024
BsnI GGCC 4 cut(s) 89, 868, 1020, 2188
Bso31I GGTCTC 2 cut(s) 638, 713
Bsp1286I GDGCHC 2 cut(s) 1552, 1697
Bsp13I TCCGGA 3 cut(s) 307, 1858, 2113
Bsp19I CCATGG 1 cut(s) 1421
Bsp68I TCGCGA 1 cut(s) 1838
BspACI CCGC 7 cut(s) 135, 530, 1148, 1186, 1227, 1442, 2036
BspANI GGCC 4 cut(s) 89, 868, 1020, 2188
BspCNI CTCAG 3 cut(s) 247, 778, 1242
BspDI ATCGAT 1 cut(s) 186
BspEI TCCGGA 3 cut(s) 307, 1858, 2113
BspFNI CGCG 5 cut(s) 880, 1229, 1442, 1838, 2036
BspHI TCATGA 3 cut(s) 1212, 1239, 1677
BspLI GGNNCC 6 cut(s) 603, 927, 1200, 1446, 1549, 2172
BspMI ACCTGC 2 cut(s) 966, 1754
BspPI GGATC 4 cut(s) 884, 1801, 2165, 2178
BspQI GCTCTTC 1 cut(s) 939
BspT107I GGYRCC 2 cut(s) 925, 1547
BspTNI GGTCTC 2 cut(s) 638, 713
BsrDI GCAATG 3 cut(s) 42, 90, 532
BsrI ACTGG 4 cut(s) 67, 681, 1069, 1775
BssECI CCNNGG 6 cut(s) 801, 1421, 1432, 1564, 1916, 1964
BssNAI GTATAC 1 cut(s) 1772
BssSI CACGAG 1 cut(s) 155
BssT1I CCWWGG 2 cut(s) 801, 1421
Bst1107I GTATAC 1 cut(s) 1772
Bst2BI CACGAG 1 cut(s) 155
Bst2UI CCWGG 1 cut(s) 1719
Bst4CI ACNGT 4 cut(s) 145, 420, 962, 1203
Bst6I CTCTTC 5 cut(s) 288, 386, 939, 1265, 2069
BstAPI GCANNNNNTGC 1 cut(s) 925
BstBAI YACGTR 1 cut(s) 79
BstC8I GCNNGC 2 cut(s) 930, 1625
BstDEI CTNAG 6 cut(s) 255, 426, 588, 765, 1250, 1759
BstDSI CCRYGG 2 cut(s) 1421, 1432
BstF5I GGATG 5 cut(s) 316, 1107, 1281, 1488, 1786
BstFNI CGCG 5 cut(s) 880, 1229, 1442, 1838, 2036
BstH2I RGCGCY 1 cut(s) 617
BstHHI GCGC 3 cut(s) 616, 1231, 1807
BstMAI GTCTC 3 cut(s) 256, 638, 713
BstMCI CGRYCG 1 cut(s) 2185
BstMWI GCNNNNNNNGC 2 cut(s) 112, 925
BstNI CCWGG 1 cut(s) 1719
BstSCI CCNGG 3 cut(s) 1168, 1717, 1789
BstSLI GKGCMC 1 cut(s) 1552
BstUI CGCG 5 cut(s) 880, 1229, 1442, 1838, 2036
BstV1I GCAGC 1 cut(s) 1210
BstV2I GAAGAC 3 cut(s) 333, 1700, 2007
BstX2I RGATCY 2 cut(s) 464, 2170
BstYI RGATCY 2 cut(s) 464, 2170
BstZ17I GTATAC 1 cut(s) 1772
Bsu15I ATCGAT 1 cut(s) 186
BsuRI GGCC 4 cut(s) 89, 868, 1020, 2188
BsuTUI ATCGAT 1 cut(s) 186
BtgI CCRYGG 2 cut(s) 1421, 1432
BtrI CACGTC 2 cut(s) 598, 1736
BtsCI GGATG 5 cut(s) 316, 1107, 1281, 1488, 1786
BtuMI TCGCGA 1 cut(s) 1838
BveI ACCTGC 2 cut(s) 966, 1754
Cac8I GCNNGC 2 cut(s) 930, 1625
CciI TCATGA 3 cut(s) 1212, 1239, 1677
CfoI GCGC 3 cut(s) 616, 1231, 1807
Cfr13I GGNCC 3 cut(s) 1019, 1199, 1594
ClaI ATCGAT 1 cut(s) 186
CsiI ACCWGGT 1 cut(s) 1717
Csp6I GTAC 4 cut(s) 58, 76, 1111, 1332
CviQI GTAC 4 cut(s) 58, 76, 1111, 1332
DdeI CTNAG 6 cut(s) 255, 426, 588, 765, 1250, 1759
DraIII CACNNNGTG 1 cut(s) 1721
EaeI YGGCCR 1 cut(s) 866
Eam1104I CTCTTC 5 cut(s) 288, 386, 939, 1265, 2069
EarI CTCTTC 5 cut(s) 288, 386, 939, 1265, 2069
Ecl136II GAGCTC 1 cut(s) 1695
Eco130I CCWWGG 2 cut(s) 801, 1421
Eco24I GRGCYC 1 cut(s) 1697
Eco31I GGTCTC 2 cut(s) 638, 713
Eco32I GATATC 1 cut(s) 1834
Eco47I GGWCC 2 cut(s) 1199, 1594
Eco47III AGCGCT 1 cut(s) 615
Eco53kI GAGCTC 1 cut(s) 1695
EcoICRI GAGCTC 1 cut(s) 1695
EcoO109I RGGNCCY 1 cut(s) 1019
EcoRII CCWGG 1 cut(s) 1717
EcoRV GATATC 1 cut(s) 1834
EcoT14I CCWWGG 2 cut(s) 801, 1421
EcoT22I ATGCAT 3 cut(s) 921, 1640, 2026
EcoT38I GRGCYC 1 cut(s) 1697
ErhI CCWWGG 2 cut(s) 801, 1421
FaqI GGGAC 3 cut(s) 191, 1212, 1334
FbaI TGATCA 1 cut(s) 313
FblI GTMKAC 2 cut(s) 1027, 1771
Fnu4HI GCNGC 2 cut(s) 1224, 1227
FokI GGATG 5 cut(s) 323, 1114, 1288, 1475, 1773
FriOI GRGCYC 1 cut(s) 1697
Fsp4HI GCNGC 2 cut(s) 1224, 1227
FspBI CTAG 4 cut(s) 48, 617, 840, 1631
FspI TGCGCA 1 cut(s) 1806
GlaI GCGC 3 cut(s) 615, 1230, 1806
GluI GCNGC 2 cut(s) 1224, 1227
HaeII RGCGCY 1 cut(s) 617
HaeIII GGCC 4 cut(s) 89, 868, 1020, 2188
HapII CCGG 7 cut(s) 169, 308, 1169, 1379, 1790, 1859, 2114
HhaI GCGC 3 cut(s) 616, 1231, 1807
Hin6I GCGC 3 cut(s) 614, 1229, 1805
HinP1I GCGC 3 cut(s) 614, 1229, 1805
HincII GTYRAC 2 cut(s) 244, 999
HindII GTYRAC 2 cut(s) 244, 999
HindIII AAGCTT 2 cut(s) 1605, 1625
HpaI GTTAAC 2 cut(s) 244, 999
HpaII CCGG 7 cut(s) 169, 308, 1169, 1379, 1790, 1859, 2114
HphI GGTGA 3 cut(s) 1580, 1733, 1973
Hpy166II GTNNAC 7 cut(s) 244, 981, 999, 1028, 1074, 1334, 1772
Hpy188I TCNGA 6 cut(s) 256, 318, 325, 754, 768, 1351
Hpy8I GTNNAC 7 cut(s) 244, 981, 999, 1028, 1074, 1334, 1772
Hpy99I CGWCG 7 cut(s) 507, 638, 713, 1006, 1527, 1740, 1990
HpyAV CCTTC 7 cut(s) 328, 1034, 1479, 1871, 2004, 2036, 2081
HpyCH4III ACNGT 4 cut(s) 145, 420, 962, 1203
HpyCH4IV ACGT 7 cut(s) 78, 204, 246, 597, 1001, 1700, 1735
HpyCH4V TGCA 5 cut(s) 919, 1602, 1623, 1638, 2024
HpyF10VI GCNNNNNNNGC 2 cut(s) 112, 925
HpyF3I CTNAG 6 cut(s) 255, 426, 588, 765, 1250, 1759
HpySE526I ACGT 7 cut(s) 78, 204, 246, 597, 1001, 1700, 1735
HspAI GCGC 3 cut(s) 614, 1229, 1805
Kpn2I TCCGGA 3 cut(s) 307, 1858, 2113
Ksp22I TGATCA 1 cut(s) 313
KspAI GTTAAC 2 cut(s) 244, 999
LguI GCTCTTC 1 cut(s) 939
LmnI GCTCC 3 cut(s) 238, 1745, 2116
Lsp1109I GCAGC 1 cut(s) 1210
LweI GCATC 5 cut(s) 502, 1173, 1210, 1389, 2011
MabI ACCWGGT 1 cut(s) 1717
MaeI CTAG 4 cut(s) 48, 617, 840, 1631
MaeII ACGT 7 cut(s) 78, 204, 246, 597, 1001, 1700, 1735
MaeIII GTNAC 6 cut(s) 340, 861, 884, 1526, 1568, 1721
MflI RGATCY 2 cut(s) 464, 2170
MhlI GDGCHC 2 cut(s) 1552, 1697
MluCI AATT 6 cut(s) 411, 772, 819, 1006, 1515, 1682
MlyI GAGTC 5 cut(s) 855, 1124, 1267, 1718, 1745
MmeI TCCRAC 1 cut(s) 944
Mph1103I ATGCAT 3 cut(s) 921, 1640, 2026
MroI TCCGGA 3 cut(s) 307, 1858, 2113
MroXI GAANNNNTTC 2 cut(s) 578, 948
MseI TTAA 8 cut(s) 243, 939, 998, 1367, 1518, 1970, 2069, 2191
MslI CAYNNNNRTG 1 cut(s) 1397
MspI CCGG 7 cut(s) 169, 308, 1169, 1379, 1790, 1859, 2114
MspR9I CCNGG 3 cut(s) 1170, 1719, 1791
Mva1269I GAATGC 2 cut(s) 1640, 2024
MvaI CCWGG 1 cut(s) 1719
MvnI CGCG 5 cut(s) 880, 1229, 1442, 1838, 2036
MwoI GCNNNNNNNGC 2 cut(s) 112, 925
NciI CCSGG 2 cut(s) 1170, 1791
NcoI CCATGG 1 cut(s) 1421
NlaIV GGNNCC 6 cut(s) 603, 927, 1200, 1446, 1549, 2172
NmuCI GTSAC 3 cut(s) 340, 1568, 1721
NruI TCGCGA 1 cut(s) 1838
NsbI TGCGCA 1 cut(s) 1806
NsiI ATGCAT 3 cut(s) 921, 1640, 2026
PagI TCATGA 3 cut(s) 1212, 1239, 1677
PaqCI CACCTGC 1 cut(s) 966
PciSI GCTCTTC 1 cut(s) 939
PcsI WCGNNNNNNNCGW 1 cut(s) 451
PctI GAATGC 2 cut(s) 1640, 2024
PdmI GAANNNNTTC 2 cut(s) 578, 948
PfeI GAWTC 6 cut(s) 299, 401, 547, 674, 1346, 1412
PfoI TCCNGGA 1 cut(s) 1789
PkrI GCNGC 2 cut(s) 1225, 1228
Ple19I CGATCG 1 cut(s) 2185
PleI GAGTC 5 cut(s) 854, 1124, 1266, 1718, 1745
PpsI GAGTC 5 cut(s) 854, 1124, 1266, 1718, 1745
Ppu21I YACGTR 1 cut(s) 79
PshBI ATTAAT 1 cut(s) 1518
Psp124BI GAGCTC 1 cut(s) 1697
Psp1406I AACGTT 2 cut(s) 246, 1700
Psp6I CCWGG 1 cut(s) 1717
PspGI CCWGG 1 cut(s) 1717
PspN4I GGNNCC 6 cut(s) 603, 927, 1200, 1446, 1549, 2172
PspPI GGNCC 3 cut(s) 1019, 1199, 1594
PsuI RGATCY 2 cut(s) 464, 2170
PvuI CGATCG 1 cut(s) 2185
RruI TCGCGA 1 cut(s) 1838
RsaI GTAC 4 cut(s) 59, 77, 1112, 1333
RsaNI GTAC 4 cut(s) 58, 76, 1111, 1332
RseI CAYNNNNRTG 1 cut(s) 1397
SacI GAGCTC 1 cut(s) 1697
SapI GCTCTTC 1 cut(s) 939
SaqAI TTAA 8 cut(s) 243, 939, 998, 1367, 1518, 1970, 2069, 2191
SatI GCNGC 2 cut(s) 1224, 1227
Sau96I GGNCC 3 cut(s) 1019, 1199, 1594
SchI GAGTC 5 cut(s) 855, 1124, 1267, 1718, 1745
ScrFI CCNGG 3 cut(s) 1170, 1719, 1791
SduI GDGCHC 2 cut(s) 1552, 1697
SexAI ACCWGGT 1 cut(s) 1717
SfaNI GCATC 5 cut(s) 502, 1173, 1210, 1389, 2011
SinI GGWCC 2 cut(s) 1199, 1594
SmiMI CAYNNNNRTG 1 cut(s) 1397
SmlI CTYRAG 4 cut(s) 362, 641, 716, 953
SmoI CTYRAG 4 cut(s) 362, 641, 716, 953
Sse9I AATT 6 cut(s) 411, 772, 819, 1006, 1515, 1682
SsiI CCGC 7 cut(s) 135, 530, 1148, 1186, 1227, 1442, 2036
SspI AATATT 1 cut(s) 1089
SspMI CTAG 4 cut(s) 48, 617, 840, 1631
SstI GAGCTC 1 cut(s) 1697
StyD4I CCNGG 3 cut(s) 1168, 1717, 1789
StyI CCWWGG 2 cut(s) 801, 1421
TaaI ACNGT 4 cut(s) 145, 420, 962, 1203
TaiI ACGT 7 cut(s) 81, 207, 249, 600, 1004, 1703, 1738
TasI AATT 6 cut(s) 411, 772, 819, 1006, 1515, 1682
TatI WGTACW 2 cut(s) 57, 1110
TauI GCSGC 1 cut(s) 1229
TfiI GAWTC 6 cut(s) 299, 401, 547, 674, 1346, 1412
Tru1I TTAA 8 cut(s) 243, 939, 998, 1367, 1518, 1970, 2069, 2191
Tru9I TTAA 8 cut(s) 243, 939, 998, 1367, 1518, 1970, 2069, 2191
TseFI GTSAC 3 cut(s) 340, 1568, 1721
TseI GCWGC 1 cut(s) 1223
Tsp45I GTSAC 3 cut(s) 340, 1568, 1721
TspDTI ATGAA 8 cut(s) 137, 243, 1118, 1201, 1256, 1359, 1694, 1775
TspGWI ACGGA 2 cut(s) 256, 1296
VpaK11BI GGWCC 2 cut(s) 1199, 1594
VspI ATTAAT 1 cut(s) 1518
XapI RAATTY 3 cut(s) 772, 1006, 1682
XbaI TCTAGA 1 cut(s) 1630
XmiI GTMKAC 2 cut(s) 1027, 1771
XmnI GAANNNNTTC 2 cut(s) 578, 948
XspI CTAG 4 cut(s) 48, 617, 840, 1631
Zsp2I ATGCAT 3 cut(s) 921, 1640, 2026
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.