MD03G1090400.v1.1

Xyloglucan galactosyltransferase KATAMARI1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0015061
Physical Location & Seq
Reverse (-)
7432867 .. 7434687
1821 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1090400.v1.1.491

Sequence Viewer

Length: 1821 bp
ATGGGAAGGCCTTTCGTGACGTTCGCAGCCTGCCGCAACCAATACTGGTTTGTATGTGCCTCATTCCTTATATGGTTTCTATTGCTTTGTGTATACCACTCGCAGTTCATGGTTGGAAAAAGCTTGATTGCGTTGTTAGGTAATCACAATATCGACATTTCTGTTACTGTTGCCAATGAGTCTGAAAATTCCGGTGATTCGGTTTCTCTGCCTGAAGAAACCAATGAAAGTAGGAGCACAAAATCAAGAGATGAAGGTCATATGAACATCGTTTTCAATGACCGAAGTGGTGGCGTTTTTAATTTGAGAACAAAAGATGTTTTCGGAATCGAAGAACACGGCATTGAAAAATTTGGGCACCTTTCTAAGAAGGAATCAAAGCCTCATGACCGTAATGACCAAGTGAACGATCCTAGAGAAAATAAAGCTGAATCTGAGAATGGGGATGAAGACGCTAAGCCAGAAGAACATTTGGATAAAAGGGATGAATCGGATTCGGAATCCGTTTCTGAATCATGCACAGGTAAGTACATATATGTTCATGACATCCCTAGCAAATTTAATAGGGACTTGTTGAAGAAATGTGGTTCACTTAGCAATTGGACTGACATGTGTGAGCTCGCTTCAAACTTTGGCCTTGGTCCCCGCCTTTCGAATTTGGAAAAAGTTTATTCAAACACTGGTTGGTTTGCTACAAATCAGTTCTTGCTAGAGGTCATATTCCACAGCCGAATGAAGCAGTACAACTGTTTGACAAAAAACTCATCACTAGCTTCAGCAATTTTCGTACCTTACTACGTTGGCCTAGACGTGGCGCGCTACCTTTGGGGATCGAGCATATCCACGAGAGATTCTGGCTCACTTGAAATTGCGAAATGGCTGAGAGAAAAACCAGAGTGGAAGAAAATGTGGGGGAGAGATCATTTTATGGTGGCAGGAAGAATTACATGGGATTTTCGGAGATGGACTGACAAGGATTCGGAGTGGGGGACGAAGCTTATGCTTTTGCCCGAATCAAAAAACATGACAATGTTGGCAATAGAATCCAGCCCTTGGAACAGCAATGACTTTGCCATACCATATCCAACATACTTCCACCCTTCAAAAGACAATGAGGTGTTCCAATGGCAAAACCGAATGAGGAGGCAGAAGCGGCGGATATTGTTCTCCTTCGCGGGCGGTCCTAGGCCTAATCTCCAAAATTCAATCCGCAACGAAATCATAGACCAATGCAGGGCAGCAAGGAGAAAATGCAAGCTCCTAGAATGCACAACTGGTCCGGACAAGTGCCACAAGCCGGTTTTTGTCATGAAAATGTTCCAAGGCTCCGTCTTCTGCCTACAGCCTCCCGGAGACTCTCTAACCCGAAGATCAATCTTCGATTCCATCCTCGCAGGCTGCATTCCGGTGTTCTTCCACCCAGGGTCCGCATACGTCCAATACGTATGGCACCTCCCTAAGGACTACACCAAATACTCAGTTCTCATACCGGCATTTGACATAAAAAACGGGAAGGTGAGCATTGAGAGGACATTGCAGAAGATTCCGAGGCAGAAAGTTTACGAGATGAGAGAGGAAGTTGTGAAGCTGATTCCGAGAGTGATATACGCAGATCCAGGATCTAGATTGGAGACGCTTGACGATGCATTCGACATTGCGGTTAAAGGGGTTCTTGAAAGAGTGGAAACAATTAGGAAGGACATGAGAGAAGGGAAGAACACAAGCTTTGATTATGCAGAGAAAGTGAGTTGGAAGTACAATTTGTTTGGGACTGTGGAGGAGCATGAATGGGATCCTTTCTTTGAGAGACAACATATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Exostosin

Protein Analysis

607

Amino Acids

70.18

Weight (kDa)

7.87

Isoelectric Point (pI)

44.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exostosin_GT47 PF03016 173 - 511 8.9e-89 Exostosin GT47 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G29040
fragaria_vesca FvH4_3g36470
malus_domestica MD03G1090400.v1.1 MD11G1100100.v1.1
prunus_persica Prupe.6G074500_v2.0.a1
pyrus_communis pycom11g08430
rosa_chinensis RchiOBHm_Chr5g0065321
rosa_laevigata RLG00000035783
rosa_multiflora Rmu_sc0010875.1_g000002
rosa_roxburghii Rroxscaffold_1G00015860
rosa_rugosa Rorug05G0371200
rosa_samantha Rh5AG429100 Rh5BG444400 Rh5CG466700 Rh5DG456700
rosa_wichuraiana Rw5G040280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 357, 1449
AccB7I CCANNNNNTGG 1 cut(s) 1053
AccI GTMKAC 1 cut(s) 93
AccII CGCG 2 cut(s) 817, 1175
AccIII TCCGGA 1 cut(s) 1279
AciI CCGC 9 cut(s) 34, 646, 1153, 1156, 1175, 1179, 1210, 1428, 1658
AclWI GGATC 6 cut(s) 404, 838, 1607, 1627, 1787, 1800
AcsI RAATTY 5 cut(s) 187, 350, 557, 655, 1201
AcuI CTGAAG 2 cut(s) 234, 759
AfaI GTAC 4 cut(s) 530, 743, 789, 1757
AfiI CCNNNNNNNGG 5 cut(s) 811, 1053, 1234, 1297, 1459
AflIII ACRYGT 1 cut(s) 609
AgsI TTSAA 9 cut(s) 277, 347, 577, 627, 675, 866, 1104, 1206, 1676
AjiI CACGTC 1 cut(s) 811
AjnI CCWGG 2 cut(s) 1420, 1615
AluBI AGCT 8 cut(s) 123, 428, 619, 773, 997, 1258, 1588, 1725
AluI AGCT 8 cut(s) 123, 428, 619, 773, 997, 1258, 1588, 1725
Alw21I GWGCWC 2 cut(s) 239, 621
Alw26I GTCTC 3 cut(s) 1347, 1625, 1801
AlwI GGATC 6 cut(s) 404, 838, 1607, 1627, 1787, 1800
Aor13HI TCCGGA 1 cut(s) 1279
AoxI GGCC 4 cut(s) 8, 634, 802, 1187
ApeKI GCWGC 3 cut(s) 26, 1238, 1398
ApoI RAATTY 5 cut(s) 187, 350, 557, 655, 1201
ArsI GACNNNNNNTTYG 2 cut(s) 1631, 1663
Asp700I GAANNNNTTC 1 cut(s) 1316
AspA2I CCTAGG 1 cut(s) 1184
AspLEI GCGC 2 cut(s) 817, 819
AspS9I GGNCC 4 cut(s) 641, 1181, 1277, 1425
AsuC2I CCSGG 1 cut(s) 1350
AsuHPI GGTGA 2 cut(s) 206, 1528
AsuII TTCGAA 1 cut(s) 653
AvaII GGWCC 4 cut(s) 641, 1181, 1277, 1425
AvrII CCTAGG 1 cut(s) 1184
AxyI CCTNAGG 1 cut(s) 1458
BaeGI GKGCMC 1 cut(s) 360
BamHI GGATCC 1 cut(s) 1792
BanI GGYRCC 2 cut(s) 357, 1449
BanII GRGCYC 1 cut(s) 621
BauI CACGAG 1 cut(s) 844
BbsI GAAGAC 2 cut(s) 456, 1324
Bbv12I GWGCWC 2 cut(s) 239, 621
BbvI GCAGC 3 cut(s) 38, 1250, 1385
BccI CCATC 2 cut(s) 957, 1394
BceAI ACGGC 1 cut(s) 355
BcgI CGANNNNNNTGC 2 cut(s) 982, 1016
BciT130I CCWGG 2 cut(s) 1422, 1617
BcnI CCSGG 1 cut(s) 1350
BcoDI GTCTC 3 cut(s) 1347, 1625, 1801
BfaI CTAG 8 cut(s) 414, 552, 710, 770, 806, 1185, 1262, 1623
BfmI CTRYAG 1 cut(s) 1340
BisI GCNGC 5 cut(s) 27, 34, 1154, 1239, 1399
BlnI CCTAGG 1 cut(s) 1184
BlpI GCTNAGC 1 cut(s) 456
BlsI GCNGC 5 cut(s) 28, 35, 1155, 1240, 1400
Bme1390I CCNGG 3 cut(s) 1350, 1422, 1617
Bme18I GGWCC 4 cut(s) 641, 1181, 1277, 1425
BmgBI CACGTC 1 cut(s) 811
BmgT120I GGNCC 4 cut(s) 641, 1181, 1277, 1425
BmiI GGNNCC 6 cut(s) 359, 643, 1327, 1426, 1451, 1794
BmrFI CCNGG 3 cut(s) 1350, 1422, 1617
BmsI GCATC 1 cut(s) 1633
BpiI GAAGAC 2 cut(s) 456, 1324
Bpu1102I GCTNAGC 1 cut(s) 456
Bpu14I TTCGAA 1 cut(s) 653
BpuMI CCSGG 1 cut(s) 1350
BsaAI YACGTR 1 cut(s) 1444
BsaJI CCNNGG 7 cut(s) 637, 1052, 1184, 1321, 1420, 1421, 1547
BsaWI WCCGGW 3 cut(s) 191, 1279, 1405
Bsc4I CCNNNNNNNGG 5 cut(s) 811, 1053, 1234, 1297, 1459
Bse118I RCCGGY 2 cut(s) 1297, 1489
Bse1I ACTGG 3 cut(s) 50, 685, 1279
Bse21I CCTNAGG 1 cut(s) 1458
Bse3DI GCAATG 3 cut(s) 1069, 1532, 1653
BseAI TCCGGA 1 cut(s) 1279
BseBI CCWGG 2 cut(s) 1422, 1617
BseDI CCNNGG 7 cut(s) 637, 1052, 1184, 1321, 1420, 1421, 1547
BseGI GGATG 4 cut(s) 451, 490, 546, 1386
BseLI CCNNNNNNNGG 5 cut(s) 811, 1053, 1234, 1297, 1459
BseMI GCAATG 3 cut(s) 1069, 1532, 1653
BseMII CTCAG 3 cut(s) 426, 872, 1491
BseNI ACTGG 3 cut(s) 50, 685, 1279
BsePI GCGCGC 1 cut(s) 815
BseRI GAGGAG 2 cut(s) 1156, 1793
BseSI GKGCMC 1 cut(s) 360
BseXI GCAGC 3 cut(s) 38, 1250, 1385
Bsh1236I CGCG 2 cut(s) 817, 1175
BshFI GGCC 4 cut(s) 10, 636, 804, 1189
BshNI GGYRCC 2 cut(s) 357, 1449
BsiHKAI GWGCWC 2 cut(s) 239, 621
BsiSI CCGG 6 cut(s) 192, 1280, 1298, 1350, 1406, 1490
BslFI GGGAC 4 cut(s) 581, 627, 1003, 1783
BslI CCNNNNNNNGG 5 cut(s) 811, 1053, 1234, 1297, 1459
BsmAI GTCTC 3 cut(s) 1347, 1625, 1801
BsmBI CGTCTC 1 cut(s) 1625
BsmFI GGGAC 4 cut(s) 581, 627, 1003, 1783
BsmI GAATGC 3 cut(s) 1271, 1401, 1646
BsnI GGCC 4 cut(s) 10, 636, 804, 1189
Bsp119I TTCGAA 1 cut(s) 653
Bsp1286I GDGCHC 3 cut(s) 239, 360, 621
Bsp13I TCCGGA 1 cut(s) 1279
Bsp143I GATC 7 cut(s) 409, 830, 919, 1370, 1612, 1619, 1792
Bsp1720I GCTNAGC 1 cut(s) 456
BspACI CCGC 9 cut(s) 34, 646, 1153, 1156, 1175, 1179, 1210, 1428, 1658
BspANI GGCC 4 cut(s) 10, 636, 804, 1189
BspCNI CTCAG 3 cut(s) 427, 873, 1490
BspEI TCCGGA 1 cut(s) 1279
BspFNI CGCG 2 cut(s) 817, 1175
BspHI TCATGA 3 cut(s) 385, 541, 1308
BspLI GGNNCC 6 cut(s) 359, 643, 1327, 1426, 1451, 1794
BspPI GGATC 6 cut(s) 404, 838, 1607, 1627, 1787, 1800
BspT104I TTCGAA 1 cut(s) 653
BspT107I GGYRCC 2 cut(s) 357, 1449
BsrDI GCAATG 3 cut(s) 1069, 1532, 1653
BsrFI RCCGGY 2 cut(s) 1297, 1489
BsrI ACTGG 3 cut(s) 50, 685, 1279
BssAI RCCGGY 2 cut(s) 1297, 1489
BssECI CCNNGG 7 cut(s) 637, 1052, 1184, 1321, 1420, 1421, 1547
BssHII GCGCGC 1 cut(s) 815
BssMI GATC 7 cut(s) 409, 830, 919, 1370, 1612, 1619, 1792
BssNAI GTATAC 1 cut(s) 94
BssSI CACGAG 1 cut(s) 844
BssT1I CCWWGG 4 cut(s) 637, 1052, 1184, 1321
Bst1107I GTATAC 1 cut(s) 94
Bst2BI CACGAG 1 cut(s) 844
Bst2UI CCWGG 2 cut(s) 1422, 1617
Bst4CI ACNGT 4 cut(s) 169, 392, 749, 1774
BstBAI YACGTR 1 cut(s) 1444
BstBI TTCGAA 1 cut(s) 653
BstC8I GCNNGC 6 cut(s) 31, 621, 817, 1177, 1256, 1396
BstDEI CTNAG 7 cut(s) 366, 435, 456, 593, 881, 1458, 1477
BstENI CCTNNNNNAGG 1 cut(s) 1457
BstF5I GGATG 4 cut(s) 451, 490, 546, 1386
BstFNI CGCG 2 cut(s) 817, 1175
BstHHI GCGC 2 cut(s) 817, 819
BstKTI GATC 7 cut(s) 412, 833, 922, 1373, 1615, 1622, 1795
BstMAI GTCTC 3 cut(s) 1347, 1625, 1801
BstMBI GATC 7 cut(s) 409, 830, 919, 1370, 1612, 1619, 1792
BstMWI GCNNNNNNNGC 1 cut(s) 1153
BstNI CCWGG 2 cut(s) 1422, 1617
BstNSI RCATGY 1 cut(s) 613
BstSCI CCNGG 3 cut(s) 1348, 1420, 1615
BstSFI CTRYAG 1 cut(s) 1340
BstSLI GKGCMC 1 cut(s) 360
BstSNI TACGTA 1 cut(s) 1444
BstUI CGCG 2 cut(s) 817, 1175
BstV1I GCAGC 3 cut(s) 38, 1250, 1385
BstV2I GAAGAC 2 cut(s) 456, 1324
BstX2I RGATCY 3 cut(s) 1612, 1619, 1792
BstYI RGATCY 3 cut(s) 1612, 1619, 1792
BstZ17I GTATAC 1 cut(s) 94
Bsu36I CCTNAGG 1 cut(s) 1458
BsuRI GGCC 4 cut(s) 10, 636, 804, 1189
BtrI CACGTC 1 cut(s) 811
BtsCI GGATG 4 cut(s) 451, 490, 546, 1386
BtsIMutI CAGTG 1 cut(s) 678
Cac8I GCNNGC 6 cut(s) 31, 621, 817, 1177, 1256, 1396
CciI TCATGA 3 cut(s) 385, 541, 1308
CfoI GCGC 2 cut(s) 817, 819
Cfr10I RCCGGY 2 cut(s) 1297, 1489
Cfr13I GGNCC 4 cut(s) 641, 1181, 1277, 1425
CseI GACGC 2 cut(s) 461, 1642
Csp6I GTAC 4 cut(s) 529, 742, 788, 1756
CviQI GTAC 4 cut(s) 529, 742, 788, 1756
DdeI CTNAG 7 cut(s) 366, 435, 456, 593, 881, 1458, 1477
DpnI GATC 7 cut(s) 411, 832, 921, 1372, 1614, 1621, 1794
DpnII GATC 7 cut(s) 409, 830, 919, 1370, 1612, 1619, 1792
EciI GGCGGA 1 cut(s) 1171
Ecl136II GAGCTC 1 cut(s) 619
Eco105I TACGTA 1 cut(s) 1444
Eco130I CCWWGG 4 cut(s) 637, 1052, 1184, 1321
Eco147I AGGCCT 2 cut(s) 10, 1189
Eco24I GRGCYC 1 cut(s) 621
Eco47I GGWCC 4 cut(s) 641, 1181, 1277, 1425
Eco53kI GAGCTC 1 cut(s) 619
Eco57I CTGAAG 2 cut(s) 234, 759
Eco81I CCTNAGG 1 cut(s) 1458
EcoICRI GAGCTC 1 cut(s) 619
EcoNI CCTNNNNNAGG 1 cut(s) 1457
EcoRII CCWGG 2 cut(s) 1420, 1615
EcoT14I CCWWGG 4 cut(s) 637, 1052, 1184, 1321
EcoT22I ATGCAT 1 cut(s) 1648
EcoT38I GRGCYC 1 cut(s) 621
ErhI CCWWGG 4 cut(s) 637, 1052, 1184, 1321
Esp3I CGTCTC 1 cut(s) 1625
FalI AAGNNNNNCTT 2 cut(s) 1656, 1688
FaqI GGGAC 4 cut(s) 581, 627, 1003, 1783
FauI CCCGC 2 cut(s) 653, 1168
FauNDI CATATG 1 cut(s) 261
FblI GTMKAC 1 cut(s) 93
Fnu4HI GCNGC 5 cut(s) 27, 34, 1154, 1239, 1399
FokI GGATG 4 cut(s) 458, 497, 533, 1373
FriOI GRGCYC 1 cut(s) 621
Fsp4HI GCNGC 5 cut(s) 27, 34, 1154, 1239, 1399
FspBI CTAG 8 cut(s) 414, 552, 710, 770, 806, 1185, 1262, 1623
GlaI GCGC 2 cut(s) 816, 818
GluI GCNGC 5 cut(s) 27, 34, 1154, 1239, 1399
HaeIII GGCC 4 cut(s) 10, 636, 804, 1189
HapII CCGG 6 cut(s) 192, 1280, 1298, 1350, 1406, 1490
HgaI GACGC 2 cut(s) 461, 1642
HhaI GCGC 2 cut(s) 817, 819
Hin6I GCGC 2 cut(s) 815, 817
HinP1I GCGC 2 cut(s) 815, 817
HindIII AAGCTT 3 cut(s) 121, 995, 1723
HpaII CCGG 6 cut(s) 192, 1280, 1298, 1350, 1406, 1490
HphI GGTGA 2 cut(s) 206, 1528
Hpy166II GTNNAC 4 cut(s) 94, 406, 590, 1561
Hpy188III TCNNGA 8 cut(s) 16, 246, 386, 542, 1280, 1309, 1623, 1673
Hpy8I GTNNAC 4 cut(s) 94, 406, 590, 1561
HpyAV CCTTC 7 cut(s) 248, 364, 1110, 1180, 1507, 1690, 1703
HpyCH4III ACNGT 4 cut(s) 169, 392, 749, 1774
HpyCH4IV ACGT 5 cut(s) 20, 798, 810, 1434, 1443
HpyCH4V TGCA 8 cut(s) 519, 1233, 1254, 1269, 1401, 1537, 1646, 1736
HpyF10VI GCNNNNNNNGC 1 cut(s) 1153
HpyF3I CTNAG 7 cut(s) 366, 435, 456, 593, 881, 1458, 1477
HpySE526I ACGT 5 cut(s) 20, 798, 810, 1434, 1443
HspAI GCGC 2 cut(s) 815, 817
Kpn2I TCCGGA 1 cut(s) 1279
Kzo9I GATC 7 cut(s) 409, 830, 919, 1370, 1612, 1619, 1792
LmnI GCTCC 4 cut(s) 234, 1263, 1331, 1780
Lsp1109I GCAGC 3 cut(s) 38, 1250, 1385
LweI GCATC 1 cut(s) 1633
MaeI CTAG 8 cut(s) 414, 552, 710, 770, 806, 1185, 1262, 1623
MaeII ACGT 5 cut(s) 20, 798, 810, 1434, 1443
MaeIII GTNAC 2 cut(s) 16, 163
MalI GATC 7 cut(s) 411, 832, 921, 1372, 1614, 1621, 1794
MboI GATC 7 cut(s) 409, 830, 919, 1370, 1612, 1619, 1792
MfeI CAATTG 1 cut(s) 598
MflI RGATCY 3 cut(s) 1612, 1619, 1792
MhlI GDGCHC 3 cut(s) 239, 360, 621
MlyI GAGTC 2 cut(s) 188, 1349
MmeI TCCRAC 3 cut(s) 94, 1109, 1730
Mph1103I ATGCAT 1 cut(s) 1648
MroI TCCGGA 1 cut(s) 1279
MroXI GAANNNNTTC 1 cut(s) 1316
MseI TTAA 4 cut(s) 300, 561, 1662, 1819
MslI CAYNNNNRTG 3 cut(s) 1028, 1313, 1406
MspI CCGG 6 cut(s) 192, 1280, 1298, 1350, 1406, 1490
MspR9I CCNGG 3 cut(s) 1350, 1422, 1617
MunI CAATTG 1 cut(s) 598
Mva1269I GAATGC 3 cut(s) 1271, 1401, 1646
MvaI CCWGG 2 cut(s) 1422, 1617
MvnI CGCG 2 cut(s) 817, 1175
MwoI GCNNNNNNNGC 1 cut(s) 1153
NciI CCSGG 1 cut(s) 1350
NdeI CATATG 1 cut(s) 261
NdeII GATC 7 cut(s) 409, 830, 919, 1370, 1612, 1619, 1792
NlaIV GGNNCC 6 cut(s) 359, 643, 1327, 1426, 1451, 1794
NmuCI GTSAC 1 cut(s) 16
NsiI ATGCAT 1 cut(s) 1648
NspI RCATGY 1 cut(s) 613
NspV TTCGAA 1 cut(s) 653
PagI TCATGA 3 cut(s) 385, 541, 1308
PasI CCCWGGG 1 cut(s) 1421
PauI GCGCGC 1 cut(s) 815
PceI AGGCCT 2 cut(s) 10, 1189
PciI ACATGT 1 cut(s) 609
PcsI WCGNNNNNNNCGW 2 cut(s) 1440, 1647
PctI GAATGC 3 cut(s) 1271, 1401, 1646
PdmI GAANNNNTTC 1 cut(s) 1316
PflMI CCANNNNNTGG 1 cut(s) 1053
PfoI TCCNGGA 2 cut(s) 1348, 1615
PkrI GCNGC 5 cut(s) 28, 35, 1155, 1240, 1400
PleI GAGTC 2 cut(s) 187, 1349
PpsI GAGTC 2 cut(s) 187, 1349
Ppu21I YACGTR 1 cut(s) 1444
PscI ACATGT 1 cut(s) 609
Psp124BI GAGCTC 1 cut(s) 621
Psp6I CCWGG 2 cut(s) 1420, 1615
PspGI CCWGG 2 cut(s) 1420, 1615
PspN4I GGNNCC 6 cut(s) 359, 643, 1327, 1426, 1451, 1794
PspPI GGNCC 4 cut(s) 641, 1181, 1277, 1425
PsuI RGATCY 3 cut(s) 1612, 1619, 1792
PteI GCGCGC 1 cut(s) 815
RsaI GTAC 4 cut(s) 530, 743, 789, 1757
RsaNI GTAC 4 cut(s) 529, 742, 788, 1756
RseI CAYNNNNRTG 3 cut(s) 1028, 1313, 1406
SacI GAGCTC 1 cut(s) 621
SaqAI TTAA 4 cut(s) 300, 561, 1662, 1819
SatI GCNGC 5 cut(s) 27, 34, 1154, 1239, 1399
Sau3AI GATC 7 cut(s) 409, 830, 919, 1370, 1612, 1619, 1792
Sau96I GGNCC 4 cut(s) 641, 1181, 1277, 1425
SchI GAGTC 2 cut(s) 188, 1349
ScrFI CCNGG 3 cut(s) 1350, 1422, 1617
SduI GDGCHC 3 cut(s) 239, 360, 621
SfaNI GCATC 1 cut(s) 1633
SfcI CTRYAG 1 cut(s) 1340
SfuI TTCGAA 1 cut(s) 653
SinI GGWCC 4 cut(s) 641, 1181, 1277, 1425
SmiMI CAYNNNNRTG 3 cut(s) 1028, 1313, 1406
SnaBI TACGTA 1 cut(s) 1444
SseBI AGGCCT 2 cut(s) 10, 1189
SsiI CCGC 9 cut(s) 34, 646, 1153, 1156, 1175, 1179, 1210, 1428, 1658
SspMI CTAG 8 cut(s) 414, 552, 710, 770, 806, 1185, 1262, 1623
SstI GAGCTC 1 cut(s) 621
StuI AGGCCT 2 cut(s) 10, 1189
StyD4I CCNGG 3 cut(s) 1348, 1420, 1615
StyI CCWWGG 4 cut(s) 637, 1052, 1184, 1321
TaaI ACNGT 4 cut(s) 169, 392, 749, 1774
TaiI ACGT 5 cut(s) 23, 801, 813, 1437, 1446
TaqI TCGA 6 cut(s) 153, 330, 653, 833, 1380, 1650
TaqII GACCGA 1 cut(s) 297
TatI WGTACW 3 cut(s) 528, 741, 1755
TauI GCSGC 2 cut(s) 36, 1156
Tru1I TTAA 4 cut(s) 300, 561, 1662, 1819
Tru9I TTAA 4 cut(s) 300, 561, 1662, 1819
TscAI CASTG 1 cut(s) 685
TseFI GTSAC 1 cut(s) 16
TseI GCWGC 3 cut(s) 26, 1238, 1398
Tsp45I GTSAC 1 cut(s) 16
TspGWI ACGGA 2 cut(s) 493, 1318
TspRI CASTG 1 cut(s) 685
Van91I CCANNNNNTGG 1 cut(s) 1053
VpaK11BI GGWCC 4 cut(s) 641, 1181, 1277, 1425
XagI CCTNNNNNAGG 1 cut(s) 1457
XapI RAATTY 5 cut(s) 187, 350, 557, 655, 1201
XbaI TCTAGA 1 cut(s) 1622
XceI RCATGY 1 cut(s) 613
XmaJI CCTAGG 1 cut(s) 1184
XmiI GTMKAC 1 cut(s) 93
XmnI GAANNNNTTC 1 cut(s) 1316
XspI CTAG 8 cut(s) 414, 552, 710, 770, 806, 1185, 1262, 1623
Zsp2I ATGCAT 1 cut(s) 1648
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.