AT2G29650
ERF Family

Major Facilitator Superfamily

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
12673099 .. 12676092
2994 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G29650.3

Sequence Viewer

Length: 1539 bp
ATGAACGCGAGAGCTCTTCTTTGCTCTTCAAATATTCACTCTCTCTACACTTCAAATCGTCCACCTGAAAAAACCTCTTCTTCTCGCAGCCTCCGTAATCTCAAACCATCTCCAAAGTCGTTACGGGTATGGATCTACCCGCGAAATAGGTCCAGTGTTTTCCGGGTATTAGTTCGGAGCTCCGACAAGAGTGAAAGCAGTAATTCGTATTACGTAGAAGGAGATAAAGTAAGTGGAAACAATGACGTCGTTTCTGATTCGCCTAGCTCTATCGTCCTCCCATGGTGGGAAGAGTTTCCGAAGCGGTGGGTGATTGTGTTACTCTGTTTCTCAGCTTTTCTTCTCTGCAATATGGACAGAGTGAATATGAGTATAGCTATACTTCCGATGTCAGCTGAGTATGGTTGGAATCCAGCAACAGTTGGTCTGATTCAGTCTTCTTTCTTCTGGGGTTACCTTCTTACACAGATAGCTGGTGGAATTTGGGCAGACACTGTAGGAGGGAAAAGGGTTCTTGGATTCGGTGTTATTTGGTGGTCAATCGCTACAATTCTCACTCCTGTAGCTGCTAAACTCGGTCTTCCTTACTTGCTCGTTGTTCGTGCTTTCATGGGAGTTGGAGAGGGTGTTGCAATGCCTGCTATGAATAATATATTGTCGAAGTGGGTTCCTGTGCAAGAGAGAAGCAGATCACTCGCGCTTGTTTACAGCGGAATGTACCTTGGATCTGTCACCGGTTTAGCCTTTTCGCCTTTCTTGATTCATCAATTTGGATGGCCTTCTGTGTTTTATTCTTTCGGGTCTCTTGGAACTGTATGGTTGACTCTGTGGCTAACTAAGGCAGAGAGTTCACCATTAGAAGATCCAACATTGCTCCCTGAAGAAAGAAAGCTAATTGCAGACAACTGTGCTAGCAAAGAGCCAGTGAAGTCGATCCCGTGGAGGCTGATATTGTCGAAACCACCGGTTTGGGCTCTCATCAGTTGCCACTTTTGTCACAACTGGGGAACATTCATTCTCTTAACATGGATGCCAACTTATTACCATCAAGTGCTGAAGTTCAACCTTATGGAGTCAGGACTTCTCTCTGTATTTCCATGGATGACAATGGCAATATCTGCAAATGCCGGTGGATGGATTGCCGATACACTTGTCAGCCGAGGTTTCTCTGTCACGAATGTCCGCAAGATAATGCAAACAATAGGGTTTCTTGGACCAGCGTTCTTCCTAACACAGCTGAAACACATAGATTCTCCTACAATGGCTGTTTTGTGCATGGCTTGTAGTCAGGGGACTGATGCGTTTTCACAGTCTGGTCTATACTCTAACCATCAAGACATCGCTCCAAGATACTCTGGAGTGTTACTTGGTTTGTCTAATACTGCTGGAGTACTTGCCGGAGTTCTTGGCACAGCTGCGACTGGTCACATACTACAACACGGTTCTTGGGATGACGTTTTCACGATTTCGGTCGGTCTTTACCTCGTTGGGACCGTCATTTGGAACCTATTTTCAACCGGAGAGAAGATAATCGATTGA

Protein Analysis

512

Amino Acids

56.5

Weight (kDa)

9.0

Isoelectric Point (pI)

52.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 11 - 359 3.7e-61 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 249
AccII CGCG 3 cut(s) 8, 142, 698
AciI CCGC 4 cut(s) 140, 304, 711, 1183
AclWI GGATC 4 cut(s) 140, 733, 857, 928
AcsI RAATTY 1 cut(s) 480
AcuI CTGAAG 2 cut(s) 900, 1076
AcyI GRCGYC 1 cut(s) 246
AfaI GTAC 2 cut(s) 719, 1392
AfiI CCNNNNNNNGG 3 cut(s) 286, 1134, 1500
AgeI ACCGGT 2 cut(s) 734, 964
AgsI TTSAA 4 cut(s) 30, 54, 1063, 1515
Alw21I GWGCWC 2 cut(s) 16, 182
Alw26I GTCTC 1 cut(s) 807
AlwI GGATC 4 cut(s) 140, 733, 857, 928
AlwNI CAGNNNCTG 1 cut(s) 494
AoxI GGCC 1 cut(s) 776
ApeKI GCWGC 3 cut(s) 87, 566, 1415
ApoI RAATTY 1 cut(s) 480
AsiGI ACCGGT 2 cut(s) 734, 964
Asp700I GAANNNNTTC 1 cut(s) 294
AspLEI GCGC 1 cut(s) 700
AspS9I GGNCC 3 cut(s) 150, 1214, 1491
AsuC2I CCSGG 1 cut(s) 164
AsuHPI GGTGA 3 cut(s) 322, 724, 843
AsuNHI GCTAGC 1 cut(s) 911
AvaII GGWCC 3 cut(s) 150, 1214, 1491
BaeI ACNNNNGTAYC 2 cut(s) 1137, 1170
BanII GRGCYC 3 cut(s) 16, 182, 976
BbsI GAAGAC 2 cut(s) 429, 572
Bbv12I GWGCWC 2 cut(s) 16, 182
BbvI GCAGC 3 cut(s) 99, 553, 1402
BccI CCATC 5 cut(s) 115, 768, 1053, 1128, 1338
BcgI CGANNNNNNTGC 2 cut(s) 676, 710
BcnI CCSGG 1 cut(s) 164
BcoDI GTCTC 1 cut(s) 807
BfaI CTAG 2 cut(s) 264, 912
BfmI CTRYAG 2 cut(s) 495, 561
BisI GCNGC 3 cut(s) 88, 567, 1416
BlsI GCNGC 3 cut(s) 89, 568, 1417
BmcAI AGTACT 1 cut(s) 1392
Bme1390I CCNGG 1 cut(s) 164
Bme18I GGWCC 3 cut(s) 150, 1214, 1491
BmgT120I GGNCC 3 cut(s) 150, 1214, 1491
BmiI GGNNCC 3 cut(s) 669, 1492, 1505
BmrFI CCNGG 1 cut(s) 164
BmrI ACTGGG 1 cut(s) 1012
BmsI GCATC 2 cut(s) 1020, 1288
BmtI GCTAGC 1 cut(s) 915
BmuI ACTGGG 1 cut(s) 1012
BpiI GAAGAC 2 cut(s) 429, 572
BpmI CTGGAG 2 cut(s) 1377, 1407
BpuMI CCSGG 1 cut(s) 164
Bsa29I ATCGAT 1 cut(s) 1533
BsaAI YACGTR 1 cut(s) 214
BsaHI GRCGYC 1 cut(s) 246
BsaI GGTCTC 1 cut(s) 807
BsaJI CCNNGG 5 cut(s) 281, 721, 938, 1097, 1159
BsaWI WCCGGW 3 cut(s) 734, 964, 1517
BsaXI ACNNNNNCTCC 4 cut(s) 213, 243, 612, 642
Bsc4I CCNNNNNNNGG 3 cut(s) 286, 1134, 1500
Bse118I RCCGGY 3 cut(s) 734, 964, 1127
Bse1I ACTGG 4 cut(s) 153, 923, 1007, 1426
Bse3DI GCAATG 2 cut(s) 639, 869
BseCI ATCGAT 1 cut(s) 1533
BseDI CCNNGG 5 cut(s) 281, 721, 938, 1097, 1159
BseGI GGATG 5 cut(s) 779, 1035, 1107, 1139, 1456
BseLI CCNNNNNNNGG 3 cut(s) 286, 1134, 1500
BseMI GCAATG 2 cut(s) 639, 869
BseMII CTCAG 2 cut(s) 345, 387
BseNI ACTGG 4 cut(s) 153, 923, 1007, 1426
BseXI GCAGC 3 cut(s) 99, 553, 1402
Bsh1236I CGCG 3 cut(s) 8, 142, 698
Bsh1285I CGRYCG 1 cut(s) 1473
BshFI GGCC 1 cut(s) 778
BshTI ACCGGT 2 cut(s) 734, 964
BshVI ATCGAT 1 cut(s) 1533
BsiEI CGRYCG 1 cut(s) 1473
BsiHKAI GWGCWC 2 cut(s) 16, 182
BsiSI CCGG 6 cut(s) 163, 735, 965, 1128, 1398, 1518
BslFI GGGAC 2 cut(s) 1306, 1504
BslI CCNNNNNNNGG 3 cut(s) 286, 1134, 1500
BsmAI GTCTC 1 cut(s) 807
BsmFI GGGAC 2 cut(s) 1306, 1504
BsnI GGCC 1 cut(s) 778
Bso31I GGTCTC 1 cut(s) 807
Bsp1286I GDGCHC 3 cut(s) 16, 182, 976
Bsp143I GATC 5 cut(s) 132, 689, 725, 862, 933
Bsp19I CCATGG 2 cut(s) 281, 1097
BspACI CCGC 4 cut(s) 140, 304, 711, 1183
BspANI GGCC 1 cut(s) 778
BspCNI CTCAG 2 cut(s) 344, 388
BspDI ATCGAT 1 cut(s) 1533
BspFNI CGCG 3 cut(s) 8, 142, 698
BspLI GGNNCC 3 cut(s) 669, 1492, 1505
BspOI GCTAGC 1 cut(s) 915
BspPI GGATC 4 cut(s) 140, 733, 857, 928
BspQI GCTCTTC 2 cut(s) 21, 31
BspTNI GGTCTC 1 cut(s) 807
BsrDI GCAATG 2 cut(s) 639, 869
BsrFI RCCGGY 3 cut(s) 734, 964, 1127
BsrI ACTGG 4 cut(s) 153, 923, 1007, 1426
BssAI RCCGGY 3 cut(s) 734, 964, 1127
BssECI CCNNGG 5 cut(s) 281, 721, 938, 1097, 1159
BssMI GATC 5 cut(s) 132, 689, 725, 862, 933
BssNI GRCGYC 1 cut(s) 246
BssT1I CCWWGG 3 cut(s) 281, 721, 1097
Bst4CI ACNGT 7 cut(s) 421, 496, 814, 908, 1311, 1442, 1495
Bst6I CTCTTC 4 cut(s) 21, 31, 82, 285
BstACI GRCGYC 1 cut(s) 246
BstAPI GCANNNNNTGC 2 cut(s) 638, 1118
BstBAI YACGTR 1 cut(s) 214
BstC8I GCNNGC 2 cut(s) 639, 913
BstDEI CTNAG 3 cut(s) 331, 396, 837
BstDSI CCRYGG 3 cut(s) 281, 938, 1097
BstEII GGTNACC 1 cut(s) 452
BstF5I GGATG 5 cut(s) 779, 1035, 1107, 1139, 1456
BstFNI CGCG 3 cut(s) 8, 142, 698
BstHHI GCGC 1 cut(s) 700
BstKTI GATC 5 cut(s) 135, 692, 728, 865, 936
BstMAI GTCTC 1 cut(s) 807
BstMBI GATC 5 cut(s) 132, 689, 725, 862, 933
BstMCI CGRYCG 1 cut(s) 1473
BstMWI GCNNNNNNNGC 2 cut(s) 638, 1118
BstPI GGTNACC 1 cut(s) 452
BstSCI CCNGG 1 cut(s) 162
BstSFI CTRYAG 2 cut(s) 495, 561
BstSNI TACGTA 1 cut(s) 214
BstUI CGCG 3 cut(s) 8, 142, 698
BstV1I GCAGC 3 cut(s) 99, 553, 1402
BstV2I GAAGAC 2 cut(s) 429, 572
BstX2I RGATCY 3 cut(s) 132, 725, 862
BstXI CCANNNNNNTGG 1 cut(s) 969
BstYI RGATCY 3 cut(s) 132, 725, 862
Bsu15I ATCGAT 1 cut(s) 1533
BsuRI GGCC 1 cut(s) 778
BsuTUI ATCGAT 1 cut(s) 1533
BtgI CCRYGG 3 cut(s) 281, 938, 1097
BtgZI GCGATG 1 cut(s) 1324
BtsCI GGATG 5 cut(s) 779, 1035, 1107, 1139, 1456
BtsIMutI CAGTG 3 cut(s) 160, 492, 930
Cac8I GCNNGC 2 cut(s) 639, 913
CaiI CAGNNNCTG 1 cut(s) 494
CfoI GCGC 1 cut(s) 700
Cfr10I RCCGGY 3 cut(s) 734, 964, 1127
Cfr13I GGNCC 3 cut(s) 150, 1214, 1491
ClaI ATCGAT 1 cut(s) 1533
Csp6I GTAC 2 cut(s) 718, 1391
CspAI ACCGGT 2 cut(s) 734, 964
CviAII CATG 5 cut(s) 282, 610, 1026, 1098, 1276
CviQI GTAC 2 cut(s) 718, 1391
DdeI CTNAG 3 cut(s) 331, 396, 837
DpnI GATC 5 cut(s) 134, 691, 727, 864, 935
DpnII GATC 5 cut(s) 132, 689, 725, 862, 933
Eam1104I CTCTTC 4 cut(s) 21, 31, 82, 285
EarI CTCTTC 4 cut(s) 21, 31, 82, 285
Ecl136II GAGCTC 2 cut(s) 14, 180
Eco105I TACGTA 1 cut(s) 214
Eco130I CCWWGG 3 cut(s) 281, 721, 1097
Eco24I GRGCYC 3 cut(s) 16, 182, 976
Eco31I GGTCTC 1 cut(s) 807
Eco47I GGWCC 3 cut(s) 150, 1214, 1491
Eco53kI GAGCTC 2 cut(s) 14, 180
Eco57I CTGAAG 2 cut(s) 900, 1076
Eco91I GGTNACC 1 cut(s) 452
EcoICRI GAGCTC 2 cut(s) 14, 180
EcoO65I GGTNACC 1 cut(s) 452
EcoT14I CCWWGG 3 cut(s) 281, 721, 1097
EcoT38I GRGCYC 3 cut(s) 16, 182, 976
ErhI CCWWGG 3 cut(s) 281, 721, 1097
FaeI CATG 5 cut(s) 285, 613, 1029, 1101, 1279
FaqI GGGAC 2 cut(s) 1306, 1504
FatI CATG 5 cut(s) 281, 609, 1025, 1097, 1275
FauI CCCGC 1 cut(s) 147
Fnu4HI GCNGC 3 cut(s) 88, 567, 1416
FokI GGATG 5 cut(s) 786, 1042, 1114, 1146, 1463
FriOI GRGCYC 3 cut(s) 16, 182, 976
Fsp4HI GCNGC 3 cut(s) 88, 567, 1416
FspBI CTAG 2 cut(s) 264, 912
GlaI GCGC 1 cut(s) 699
GluI GCNGC 3 cut(s) 88, 567, 1416
GsuI CTGGAG 2 cut(s) 1377, 1407
HaeIII GGCC 1 cut(s) 778
HapII CCGG 6 cut(s) 163, 735, 965, 1128, 1398, 1518
HhaI GCGC 1 cut(s) 700
Hin1I GRCGYC 1 cut(s) 246
Hin1II CATG 5 cut(s) 285, 613, 1029, 1101, 1279
Hin6I GCGC 1 cut(s) 698
HinP1I GCGC 1 cut(s) 698
HincII GTYRAC 1 cut(s) 822
HindII GTYRAC 1 cut(s) 822
HinfI GANTC 8 cut(s) 257, 409, 430, 519, 760, 823, 1073, 1250
HpaII CCGG 6 cut(s) 163, 735, 965, 1128, 1398, 1518
HphI GGTGA 3 cut(s) 322, 724, 843
Hpy166II GTNNAC 4 cut(s) 62, 706, 822, 851
Hpy188I TCNGA 6 cut(s) 177, 184, 256, 300, 387, 429
Hpy188III TCNNGA 6 cut(s) 757, 1077, 1174, 1334, 1356, 1462
Hpy8I GTNNAC 4 cut(s) 62, 706, 822, 851
Hpy99I CGWCG 1 cut(s) 251
HpyAV CCTTC 3 cut(s) 212, 467, 789
HpyCH4III ACNGT 7 cut(s) 421, 496, 814, 908, 1311, 1442, 1495
HpyCH4IV ACGT 3 cut(s) 213, 246, 1455
HpyCH4V TGCA 7 cut(s) 348, 632, 676, 899, 1121, 1195, 1275
HpyF10VI GCNNNNNNNGC 2 cut(s) 638, 1118
HpyF3I CTNAG 3 cut(s) 331, 396, 837
HpySE526I ACGT 3 cut(s) 213, 246, 1455
Hsp92I GRCGYC 1 cut(s) 246
Hsp92II CATG 5 cut(s) 285, 613, 1029, 1101, 1279
HspAI GCGC 1 cut(s) 698
Kzo9I GATC 5 cut(s) 132, 689, 725, 862, 933
LguI GCTCTTC 2 cut(s) 21, 31
LmnI GCTCC 4 cut(s) 177, 185, 879, 1348
Lsp1109I GCAGC 3 cut(s) 99, 553, 1402
LweI GCATC 2 cut(s) 1020, 1288
MaeI CTAG 2 cut(s) 264, 912
MaeII ACGT 3 cut(s) 213, 246, 1455
MaeIII GTNAC 8 cut(s) 120, 318, 452, 730, 995, 1171, 1362, 1424
MalI GATC 5 cut(s) 134, 691, 727, 864, 935
MboI GATC 5 cut(s) 132, 689, 725, 862, 933
MflI RGATCY 3 cut(s) 132, 725, 862
MhlI GDGCHC 3 cut(s) 16, 182, 976
MluCI AATT 5 cut(s) 202, 480, 549, 767, 894
MlyI GAGTC 2 cut(s) 817, 1082
MmeI TCCRAC 4 cut(s) 207, 386, 598, 890
MnlI CCTC 8 cut(s) 85, 101, 287, 494, 616, 936, 1154, 1493
MroXI GAANNNNTTC 1 cut(s) 294
MseI TTAA 1 cut(s) 1022
MspA1I CMGCKG 4 cut(s) 395, 711, 1237, 1415
MspI CCGG 6 cut(s) 163, 735, 965, 1128, 1398, 1518
MspR9I CCNGG 1 cut(s) 164
MvnI CGCG 3 cut(s) 8, 142, 698
MwoI GCNNNNNNNGC 2 cut(s) 638, 1118
NciI CCSGG 1 cut(s) 164
NcoI CCATGG 2 cut(s) 281, 1097
NdeII GATC 5 cut(s) 132, 689, 725, 862, 933
NheI GCTAGC 1 cut(s) 911
NlaIII CATG 5 cut(s) 285, 613, 1029, 1101, 1279
NlaIV GGNNCC 3 cut(s) 669, 1492, 1505
NmeAIII GCCGAG 1 cut(s) 1184
NmuCI GTSAC 4 cut(s) 730, 995, 1171, 1424
PciSI GCTCTTC 2 cut(s) 21, 31
PcsI WCGNNNNNNNCGW 2 cut(s) 91, 1491
PdmI GAANNNNTTC 1 cut(s) 294
PfeI GAWTC 6 cut(s) 257, 409, 430, 519, 760, 1250
PinAI ACCGGT 2 cut(s) 734, 964
PkrI GCNGC 3 cut(s) 89, 568, 1417
PleI GAGTC 2 cut(s) 817, 1081
PpsI GAGTC 2 cut(s) 817, 1081
Ppu21I YACGTR 1 cut(s) 214
Psp124BI GAGCTC 2 cut(s) 16, 182
PspEI GGTNACC 1 cut(s) 452
PspN4I GGNNCC 3 cut(s) 669, 1492, 1505
PspPI GGNCC 3 cut(s) 150, 1214, 1491
PstNI CAGNNNCTG 1 cut(s) 494
PsuI RGATCY 3 cut(s) 132, 725, 862
PvuII CAGCTG 3 cut(s) 395, 1237, 1415
RsaI GTAC 2 cut(s) 719, 1392
RsaNI GTAC 2 cut(s) 718, 1391
SacI GAGCTC 2 cut(s) 16, 182
SapI GCTCTTC 2 cut(s) 21, 31
SaqAI TTAA 1 cut(s) 1022
SatI GCNGC 3 cut(s) 88, 567, 1416
Sau3AI GATC 5 cut(s) 132, 689, 725, 862, 933
Sau96I GGNCC 3 cut(s) 150, 1214, 1491
ScaI AGTACT 1 cut(s) 1392
SchI GAGTC 2 cut(s) 817, 1082
ScrFI CCNGG 1 cut(s) 164
SduI GDGCHC 3 cut(s) 16, 182, 976
SfaNI GCATC 2 cut(s) 1020, 1288
SfcI CTRYAG 2 cut(s) 495, 561
SinI GGWCC 3 cut(s) 150, 1214, 1491
SnaBI TACGTA 1 cut(s) 214
Sse9I AATT 5 cut(s) 202, 480, 549, 767, 894
SsiI CCGC 4 cut(s) 140, 304, 711, 1183
SspI AATATT 1 cut(s) 34
SspMI CTAG 2 cut(s) 264, 912
SstI GAGCTC 2 cut(s) 16, 182
StyD4I CCNGG 1 cut(s) 162
StyI CCWWGG 3 cut(s) 281, 721, 1097
TaaI ACNGT 7 cut(s) 421, 496, 814, 908, 1311, 1442, 1495
TaiI ACGT 3 cut(s) 216, 249, 1458
TaqI TCGA 4 cut(s) 659, 932, 956, 1533
TaqII GACCGA 3 cut(s) 566, 1459, 1463
TasI AATT 5 cut(s) 202, 480, 549, 767, 894
TatI WGTACW 1 cut(s) 1390
TfiI GAWTC 6 cut(s) 257, 409, 430, 519, 760, 1250
Tru1I TTAA 1 cut(s) 1022
Tru9I TTAA 1 cut(s) 1022
TscAI CASTG 3 cut(s) 160, 499, 930
TseFI GTSAC 4 cut(s) 730, 995, 1171, 1424
TseI GCWGC 3 cut(s) 87, 566, 1415
Tsp45I GTSAC 4 cut(s) 730, 995, 1171, 1424
TspDTI ATGAA 5 cut(s) 17, 598, 659, 752, 1003
TspGWI ACGGA 1 cut(s) 83
TspRI CASTG 3 cut(s) 160, 499, 930
VpaK11BI GGWCC 3 cut(s) 150, 1214, 1491
XapI RAATTY 1 cut(s) 480
XmnI GAANNNNTTC 1 cut(s) 294
XspI CTAG 2 cut(s) 264, 912
ZraI GACGTC 1 cut(s) 247
ZrmI AGTACT 1 cut(s) 1392
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.