AT2G32040

BT1 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
13635094 .. 13638081
2988 bp
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UTR
Exon/CDS
Intron
AT2G32040.1

Sequence Viewer

Length: 1683 bp
ATGGCGAGTCGCTCTCTTTTCTCTATCTCAATCTCACCTTCTCAATTTACAGTTTTGCCATCCATCAACAACGAGAGACGACGCCTTGCTATCGCCGCTCGATCTCACCGACTATCACGCCGGAAGATTCGTAAGAGACCTCCTGATAGAGATATGTCCTCCATAGTTTCAATCCCGGAGCTTCCTCGCCGGCGGGATTCTGAGGAAAGCCTGCTTTTAGATTCTCGAATCAGTGTAGCTGAAGGAGATACATCGAATACAGATGTAGAAGGAGACAGAGATACTACTTCTAGTATTAGAACACAGCCTCCCCCTCGTAAAGGAAGAAATCTTAGTAGCAGCAGAATCAAATTCTACGGTGTTGAATTATCACCAGATAATGTTGCTGTAGCAATGGTGTATTTTGTTCAAGGTGTTTTAGGACTCGCTAGGCTCGCTGTTAGTTTCTATTTAAAAGATGACTTGCATCTTGATCCTGCTGAGACAGCTGTGATAACGGGTCTTTCTTCATTGCCGTGGCTTGTTAAGCCTCTCTATGGTTTTATCAGTGATTCAGTGCCTCTATTTGGTTATCGAAGGAGGTCATATCTAGTTCTCTCGGGACTTCTTGGTGCATTTTCTTGGAGTTTGATGGCTGGTTTTGTTGACAGTAAATATAGTGCTGCTTTTTGTATACTTCTCGGTTCCCTCTCTGTCGCCTTTTCTGATGTTGTAGTAGACTCAATGGTAGTGGAACGGGCTCGTGGTGAGTCACAAAGCGTGTCAGGATCGCTGCAGTCTTTGTGCTGGGGATCCTCAGCTTTTGGTGGAATTGTGAGTTCCTACTTTAGCGGCTCCCTGGTGGAGTCATATGGTGTGAGGTTTGTATTTGGGGTGACAGCTTTACTACCCTTGATAACTTCAGCAGTTGCTGTTCTCGTGAATGAACAACGTGTGGTCAGACCAGCATCAGGGCAGAAAGAGAATATAACGCTGCTCAGTCCTGGTTTTCTTCAGACCTCAAAGCAGAACATGATTCAGCTATGGGGTGCCATTAAGCAACCGAATGTTTTTCTCCCCACCTTATTTATATTCTTATGGCAAGCCACACCACACTCAGATTCTGCAATGTTTTACTTCACAACGAACAAACTCGGTTTTACCCCGGAGTTTCTGGGACGAGTTAAACTTGTGACCTCAATTGCCTCATTGCTTGGAGTAGGACTGTACAATGGATTCCTGAAGACTGTTCCATTGAGAAAAATCTTTCTCGTGACGACAATTTTTGGCACGGGTCTTGGGATGACTCAGGTTATCCTCGTGTCAGGTTTTAACAGACAGTTGGGGATTAGCGACGAATGGTTTGCTATAGGAGACTCTCTAATCCTAACAGTCCTTGCTCAGGCTTCATTCATGCCGGTTCTTGTGTTAGCAGCGAGATTATGTCCAGAAGGAATGGAAGCAACTCTGTTCGCTACACTCATGTCAATCTCTAACGGAGGCAGTGTTCTAGGTGGGCTTATGGGTGCAGGACTGACTCAAGCATTCGGCATTACAAGAGACAGTTTTGGTAACTTATCAACACTTATTATCCTCTGCAATCTTAGCTCATTGCTCCCTCTGCCTCTTCTCGGTCTTTTACCGCGAGATTCTCCAGATACTCTTACTAAAGATGACGCAGACGTTGAGATGAAGTCCAATTAA

Protein Analysis

560

Amino Acids

60.71

Weight (kDa)

9.28

Isoelectric Point (pI)

45.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BT1 PF03092 137 - 548 9.2e-158 BT1 family
MFS_1 PF07690 143 - 498 2.6e-15 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1028
AccBSI CCGCTC 1 cut(s) 98
AccI GTMKAC 2 cut(s) 673, 717
AccII CGCG 1 cut(s) 1624
AciI CCGC 4 cut(s) 96, 193, 831, 1622
AclWI GGATC 4 cut(s) 467, 775, 786, 799
AcsI RAATTY 1 cut(s) 350
AcuI CTGAAG 4 cut(s) 261, 885, 977, 1241
AcyI GRCGYC 1 cut(s) 82
AfaI GTAC 1 cut(s) 1208
AfiI CCNNNNNNNGG 6 cut(s) 320, 536, 566, 950, 1381, 1610
AflIII ACRYGT 1 cut(s) 931
AgsI TTSAA 3 cut(s) 171, 365, 410
AjnI CCWGG 2 cut(s) 837, 982
AloI GAACNNNNNNTCC 4 cut(s) 292, 324, 1470, 1502
AluBI AGCT 7 cut(s) 181, 239, 488, 800, 881, 1021, 1587
AluI AGCT 7 cut(s) 181, 239, 488, 800, 881, 1021, 1587
Alw26I GTCTC 6 cut(s) 70, 130, 267, 476, 1347, 1533
AlwI GGATC 4 cut(s) 467, 775, 786, 799
AlwNI CAGNNNCTG 2 cut(s) 911, 1103
Ama87I CYCGRG 1 cut(s) 598
ApeKI GCWGC 5 cut(s) 339, 662, 772, 973, 1412
ApoI RAATTY 1 cut(s) 350
ArsI GACNNNNNNTTYG 2 cut(s) 1325, 1357
AsuC2I CCSGG 2 cut(s) 176, 1145
AsuHPI GGTGA 5 cut(s) 27, 98, 363, 758, 886
AvaI CYCGRG 1 cut(s) 598
BamHI GGATCC 1 cut(s) 791
BanI GGYRCC 1 cut(s) 1028
BanII GRGCYC 1 cut(s) 742
BauI CACGAG 4 cut(s) 741, 917, 1250, 1298
BbsI GAAGAC 1 cut(s) 1229
BbvCI CCTCAGC 1 cut(s) 796
BbvI GCAGC 5 cut(s) 351, 649, 759, 960, 1424
BccI CCATC 3 cut(s) 67, 71, 625
BceAI ACGGC 1 cut(s) 499
BcgI CGANNNNNNTGC 2 cut(s) 1325, 1359
BciT130I CCWGG 2 cut(s) 839, 984
BcnI CCSGG 2 cut(s) 176, 1145
BcoDI GTCTC 6 cut(s) 70, 130, 267, 476, 1347, 1533
BfaI CTAG 4 cut(s) 291, 429, 590, 1490
BfmI CTRYAG 3 cut(s) 387, 773, 1347
BisI GCNGC 7 cut(s) 96, 340, 663, 773, 832, 974, 1413
BlsI GCNGC 7 cut(s) 97, 341, 664, 774, 833, 975, 1414
Bme1390I CCNGG 4 cut(s) 176, 839, 984, 1145
BmeT110I CYCGRG 1 cut(s) 598
BmiI GGNNCC 4 cut(s) 685, 793, 835, 1030
BmrFI CCNGG 4 cut(s) 176, 839, 984, 1145
BmsI GCATC 2 cut(s) 475, 956
BpiI GAAGAC 1 cut(s) 1229
BplI GAGNNNNNCTC 1 cut(s) 30
BpmI CTGGAG 1 cut(s) 1617
Bpu10I CCTNAGC 2 cut(s) 796, 1380
BpuEI CTTGAG 1 cut(s) 1503
BpuMI CCSGG 2 cut(s) 176, 1145
BsaHI GRCGYC 1 cut(s) 82
BsaI GGTCTC 1 cut(s) 130
BsaJI CCNNGG 3 cut(s) 515, 837, 1143
BsaXI ACNNNNNCTCC 4 cut(s) 292, 322, 1470, 1500
Bsc4I CCNNNNNNNGG 6 cut(s) 320, 536, 566, 950, 1381, 1610
Bse118I RCCGGY 2 cut(s) 189, 1396
Bse3DI GCAATG 5 cut(s) 399, 509, 1113, 1187, 1589
BseBI CCWGG 2 cut(s) 839, 984
BseDI CCNNGG 3 cut(s) 515, 837, 1143
BseGI GGATG 2 cut(s) 59, 1287
BseLI CCNNNNNNNGG 6 cut(s) 320, 536, 566, 950, 1381, 1610
BseMI GCAATG 5 cut(s) 399, 509, 1113, 1187, 1589
BseMII CTCAG 7 cut(s) 192, 471, 810, 991, 1110, 1301, 1394
BseXI GCAGC 5 cut(s) 351, 649, 759, 960, 1424
BseYI CCCAGC 1 cut(s) 786
BsgI GTGCAG 1 cut(s) 1527
Bsh1236I CGCG 1 cut(s) 1624
BshNI GGYRCC 1 cut(s) 1028
BsiHKCI CYCGRG 1 cut(s) 598
BsiSI CCGG 5 cut(s) 121, 176, 190, 1145, 1397
BslFI GGGAC 2 cut(s) 615, 1170
BslI CCNNNNNNNGG 6 cut(s) 320, 536, 566, 950, 1381, 1610
BsmAI GTCTC 6 cut(s) 70, 130, 267, 476, 1347, 1533
BsmBI CGTCTC 1 cut(s) 70
BsmFI GGGAC 2 cut(s) 615, 1170
BsmI GAATGC 1 cut(s) 1523
Bso31I GGTCTC 1 cut(s) 130
BsoBI CYCGRG 1 cut(s) 598
Bsp1286I GDGCHC 1 cut(s) 742
Bsp1407I TGTACA 1 cut(s) 1206
Bsp143I GATC 4 cut(s) 101, 472, 767, 791
BspACI CCGC 4 cut(s) 96, 193, 831, 1622
BspCNI CTCAG 7 cut(s) 193, 472, 809, 990, 1109, 1300, 1393
BspFNI CGCG 1 cut(s) 1624
BspLI GGNNCC 4 cut(s) 685, 793, 835, 1030
BspMAI CTGCAG 1 cut(s) 777
BspPI GGATC 4 cut(s) 467, 775, 786, 799
BspT107I GGYRCC 1 cut(s) 1028
BspTNI GGTCTC 1 cut(s) 130
BsrBI CCGCTC 1 cut(s) 98
BsrDI GCAATG 5 cut(s) 399, 509, 1113, 1187, 1589
BsrFI RCCGGY 2 cut(s) 189, 1396
BsrGI TGTACA 1 cut(s) 1206
BssAI RCCGGY 2 cut(s) 189, 1396
BssECI CCNNGG 3 cut(s) 515, 837, 1143
BssMI GATC 4 cut(s) 101, 472, 767, 791
BssNAI GTATAC 1 cut(s) 674
BssNI GRCGYC 1 cut(s) 82
BssSI CACGAG 4 cut(s) 741, 917, 1250, 1298
Bst1107I GTATAC 1 cut(s) 674
Bst2BI CACGAG 4 cut(s) 741, 917, 1250, 1298
Bst2UI CCWGG 2 cut(s) 839, 984
Bst4CI ACNGT 8 cut(s) 52, 359, 650, 1206, 1228, 1320, 1372, 1544
Bst6I CTCTTC 1 cut(s) 1611
BstACI GRCGYC 1 cut(s) 82
BstAUI TGTACA 1 cut(s) 1206
BstC8I GCNNGC 4 cut(s) 191, 212, 435, 1083
BstDEI CTNAG 9 cut(s) 201, 332, 480, 796, 977, 1096, 1287, 1380, 1583
BstDSI CCRYGG 1 cut(s) 515
BstENI CCTNNNNNAGG 2 cut(s) 318, 1379
BstF5I GGATG 2 cut(s) 59, 1287
BstFNI CGCG 1 cut(s) 1624
BstKTI GATC 4 cut(s) 104, 475, 770, 794
BstMAI GTCTC 6 cut(s) 70, 130, 267, 476, 1347, 1533
BstMBI GATC 4 cut(s) 101, 472, 767, 791
BstMWI GCNNNNNNNGC 6 cut(s) 95, 434, 485, 526, 1584, 1600
BstNI CCWGG 2 cut(s) 839, 984
BstSCI CCNGG 4 cut(s) 174, 837, 982, 1143
BstSFI CTRYAG 3 cut(s) 387, 773, 1347
BstUI CGCG 1 cut(s) 1624
BstV1I GCAGC 5 cut(s) 351, 649, 759, 960, 1424
BstV2I GAAGAC 1 cut(s) 1229
BstX2I RGATCY 1 cut(s) 791
BstYI RGATCY 1 cut(s) 791
BstZ17I GTATAC 1 cut(s) 674
BtgI CCRYGG 1 cut(s) 515
BtsCI GGATG 2 cut(s) 59, 1287
BtsI GCAGTG 1 cut(s) 1489
BtsIMutI CAGTG 4 cut(s) 238, 553, 561, 1489
Cac8I GCNNGC 4 cut(s) 191, 212, 435, 1083
CaiI CAGNNNCTG 2 cut(s) 911, 1103
Cfr10I RCCGGY 2 cut(s) 189, 1396
CseI GACGC 2 cut(s) 90, 1664
Csp6I GTAC 1 cut(s) 1207
CspCI CAANNNNNGTGG 2 cut(s) 711, 746
CviAII CATG 3 cut(s) 1012, 1393, 1462
CviQI GTAC 1 cut(s) 1207
DdeI CTNAG 9 cut(s) 201, 332, 480, 796, 977, 1096, 1287, 1380, 1583
DpnI GATC 4 cut(s) 103, 474, 769, 793
DpnII GATC 4 cut(s) 101, 472, 767, 791
DraI TTTAAA 1 cut(s) 453
Eam1104I CTCTTC 1 cut(s) 1611
EarI CTCTTC 1 cut(s) 1611
Eco24I GRGCYC 1 cut(s) 742
Eco31I GGTCTC 1 cut(s) 130
Eco57I CTGAAG 4 cut(s) 261, 885, 977, 1241
Eco88I CYCGRG 1 cut(s) 598
EcoNI CCTNNNNNAGG 2 cut(s) 318, 1379
EcoRII CCWGG 2 cut(s) 837, 982
EcoT38I GRGCYC 1 cut(s) 742
Esp3I CGTCTC 1 cut(s) 70
FaeI CATG 3 cut(s) 1015, 1396, 1465
FaqI GGGAC 2 cut(s) 615, 1170
FatI CATG 3 cut(s) 1011, 1392, 1461
FauI CCCGC 1 cut(s) 186
FauNDI CATATG 1 cut(s) 850
FblI GTMKAC 2 cut(s) 673, 717
Fnu4HI GCNGC 7 cut(s) 96, 340, 663, 773, 832, 974, 1413
FokI GGATG 2 cut(s) 46, 1294
FriOI GRGCYC 1 cut(s) 742
Fsp4HI GCNGC 7 cut(s) 96, 340, 663, 773, 832, 974, 1413
FspBI CTAG 4 cut(s) 291, 429, 590, 1490
GluI GCNGC 7 cut(s) 96, 340, 663, 773, 832, 974, 1413
GsaI CCCAGC 1 cut(s) 790
GsuI CTGGAG 1 cut(s) 1617
HapII CCGG 5 cut(s) 121, 176, 190, 1145, 1397
HgaI GACGC 2 cut(s) 90, 1664
Hin1I GRCGYC 1 cut(s) 82
Hin1II CATG 3 cut(s) 1015, 1396, 1465
HincII GTYRAC 1 cut(s) 646
HindII GTYRAC 1 cut(s) 646
HpaII CCGG 5 cut(s) 121, 176, 190, 1145, 1397
HphI GGTGA 5 cut(s) 27, 98, 363, 758, 886
Hpy166II GTNNAC 3 cut(s) 646, 674, 718
Hpy188I TCNGA 5 cut(s) 202, 706, 941, 996, 1099
Hpy8I GTNNAC 3 cut(s) 646, 674, 718
Hpy99I CGWCG 2 cut(s) 84, 1337
HpyAV CCTTC 5 cut(s) 48, 236, 263, 570, 1424
HpyCH4III ACNGT 8 cut(s) 52, 359, 650, 1206, 1228, 1320, 1372, 1544
HpyCH4IV ACGT 2 cut(s) 931, 1662
HpyCH4V TGCA 6 cut(s) 466, 614, 775, 1106, 1508, 1578
HpyF10VI GCNNNNNNNGC 6 cut(s) 95, 434, 485, 526, 1584, 1600
HpyF3I CTNAG 9 cut(s) 201, 332, 480, 796, 977, 1096, 1287, 1380, 1583
HpySE526I ACGT 2 cut(s) 931, 1662
Hsp92I GRCGYC 1 cut(s) 82
Hsp92II CATG 3 cut(s) 1015, 1396, 1465
KroI GCCGGC 1 cut(s) 189
KroNI GCCGGC 1 cut(s) 191
Kzo9I GATC 4 cut(s) 101, 472, 767, 791
LmnI GCTCC 3 cut(s) 178, 839, 1599
Lsp1109I GCAGC 5 cut(s) 351, 649, 759, 960, 1424
LweI GCATC 2 cut(s) 475, 956
MaeI CTAG 4 cut(s) 291, 429, 590, 1490
MaeII ACGT 2 cut(s) 931, 1662
MaeIII GTNAC 5 cut(s) 750, 874, 1171, 1252, 1550
MalI GATC 4 cut(s) 103, 474, 769, 793
MbiI CCGCTC 1 cut(s) 98
MboI GATC 4 cut(s) 101, 472, 767, 791
MboII GAAGA 6 cut(s) 136, 336, 498, 983, 1234, 1598
MfeI CAATTG 1 cut(s) 1179
MflI RGATCY 1 cut(s) 791
MhlI GDGCHC 1 cut(s) 742
MluCI AATT 7 cut(s) 44, 350, 365, 810, 1179, 1260, 1678
MlyI GAGTC 8 cut(s) 16, 417, 713, 758, 854, 1279, 1349, 1510
MreI CGCCGGCG 1 cut(s) 189
MroNI GCCGGC 1 cut(s) 189
MseI TTAA 6 cut(s) 452, 525, 1035, 1164, 1311, 1681
MslI CAYNNNNRTG 1 cut(s) 514
MspA1I CMGCKG 1 cut(s) 488
MspI CCGG 5 cut(s) 121, 176, 190, 1145, 1397
MspR9I CCNGG 4 cut(s) 176, 839, 984, 1145
MunI CAATTG 1 cut(s) 1179
Mva1269I GAATGC 1 cut(s) 1523
MvaI CCWGG 2 cut(s) 839, 984
MvnI CGCG 1 cut(s) 1624
MwoI GCNNNNNNNGC 6 cut(s) 95, 434, 485, 526, 1584, 1600
NaeI GCCGGC 1 cut(s) 191
NciI CCSGG 2 cut(s) 176, 1145
NdeI CATATG 1 cut(s) 850
NdeII GATC 4 cut(s) 101, 472, 767, 791
NgoMIV GCCGGC 1 cut(s) 189
NlaIII CATG 3 cut(s) 1015, 1396, 1465
NlaIV GGNNCC 4 cut(s) 685, 793, 835, 1030
NmuCI GTSAC 4 cut(s) 750, 874, 1171, 1252
PcsI WCGNNNNNNNCGW 1 cut(s) 106
PctI GAATGC 1 cut(s) 1523
PdiI GCCGGC 1 cut(s) 191
PfoI TCCNGGA 1 cut(s) 174
PkrI GCNGC 7 cut(s) 97, 341, 664, 774, 833, 975, 1414
PleI GAGTC 8 cut(s) 15, 417, 713, 757, 853, 1279, 1349, 1510
PpsI GAGTC 8 cut(s) 15, 417, 713, 757, 853, 1279, 1349, 1510
Psp6I CCWGG 2 cut(s) 837, 982
PspFI CCCAGC 1 cut(s) 786
PspGI CCWGG 2 cut(s) 837, 982
PspN4I GGNNCC 4 cut(s) 685, 793, 835, 1030
PstI CTGCAG 1 cut(s) 777
PstNI CAGNNNCTG 2 cut(s) 911, 1103
PsuI RGATCY 1 cut(s) 791
PvuII CAGCTG 1 cut(s) 488
RsaI GTAC 1 cut(s) 1208
RsaNI GTAC 1 cut(s) 1207
RseI CAYNNNNRTG 1 cut(s) 514
SaqAI TTAA 6 cut(s) 452, 525, 1035, 1164, 1311, 1681
SatI GCNGC 7 cut(s) 96, 340, 663, 773, 832, 974, 1413
Sau3AI GATC 4 cut(s) 101, 472, 767, 791
SchI GAGTC 8 cut(s) 16, 417, 713, 758, 854, 1279, 1349, 1510
ScrFI CCNGG 4 cut(s) 176, 839, 984, 1145
SduI GDGCHC 1 cut(s) 742
SfaNI GCATC 2 cut(s) 475, 956
SfcI CTRYAG 3 cut(s) 387, 773, 1347
SgrAI CRCCGGYG 1 cut(s) 189
SmiMI CAYNNNNRTG 1 cut(s) 514
SmlI CTYRAG 1 cut(s) 1518
SmoI CTYRAG 1 cut(s) 1518
Sse9I AATT 7 cut(s) 44, 350, 365, 810, 1179, 1260, 1678
SsiI CCGC 4 cut(s) 96, 193, 831, 1622
SspMI CTAG 4 cut(s) 291, 429, 590, 1490
StyD4I CCNGG 4 cut(s) 174, 837, 982, 1143
TaaI ACNGT 8 cut(s) 52, 359, 650, 1206, 1228, 1320, 1372, 1544
TaiI ACGT 2 cut(s) 934, 1665
TaqI TCGA 4 cut(s) 100, 226, 254, 574
TaqII GACCGA 1 cut(s) 1601
TasI AATT 7 cut(s) 44, 350, 365, 810, 1179, 1260, 1678
TatI WGTACW 1 cut(s) 1206
TauI GCSGC 2 cut(s) 98, 834
Tru1I TTAA 6 cut(s) 452, 525, 1035, 1164, 1311, 1681
Tru9I TTAA 6 cut(s) 452, 525, 1035, 1164, 1311, 1681
TscAI CASTG 4 cut(s) 238, 553, 561, 1489
TseFI GTSAC 4 cut(s) 750, 874, 1171, 1252
TseI GCWGC 5 cut(s) 339, 662, 772, 973, 1412
Tsp45I GTSAC 4 cut(s) 750, 874, 1171, 1252
TspDTI ATGAA 4 cut(s) 498, 939, 1377, 1381
TspGWI ACGGA 1 cut(s) 1491
TspRI CASTG 4 cut(s) 238, 553, 561, 1489
XagI CCTNNNNNAGG 2 cut(s) 318, 1379
XapI RAATTY 1 cut(s) 350
XmiI GTMKAC 2 cut(s) 673, 717
XspI CTAG 4 cut(s) 291, 429, 590, 1490
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.