Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0009095

Physical Location & Seq

Genomic Coordinates Reverse (-)

17419779 .. 17423553

Gene Structure 3775 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1195900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1695 bp

ATGGAGTCACCGACCTTTTGTTCAATCTCAATCTTGCCCTCGGGAAGTTCAGTTTTGTCCTCGCACTCTTTCGCTTCACCTCCTCCACTCTGCTTCGTCCCTCGGATCCGCCGGAAGCCCTGCACTCTCCTGTCCGGCGCCCACAGAAGGGCTCGCCACCGACGTAGAGCCCGCCGGAAGCTTCCTCCGGAGAACGACATGTCCGTCGCCGTCCCCATGCCCTCGCCCACTCGCCGGCTCGACTTGGACGACGGGCCGTTCCTCAATTCCAGGATTAGAGAAATGGATGTGTTGATAACTGATAGGGAAAGGGCGGCAAGCATGCCTTCTCCAAGCAAGAACAAACATAGAAAGAGCAGTGTGAAAATTTTCGGGGTCGAATTGTGCCCTGACAATGTGGCTGTTGCCATGGTGTACTTTGTTCAAGGTGTTCTAGGCCTTGCAAGGCTTGCTGTCAGTTTTTATTTAAAAGACGATTTGCATCTTGACCCGGCTGAGACAGCTGTGATTAGCGGCTTTTCTGCGTTGCCATGGCTGATTAAACCTGTATACGGTTTTATTAGCGATTCTGTGCCACTATTTGGTTACCGAAGGAGGTCGTACTTGATTTTGTCAGGGCTTCTTGGTGCAGTATCCTGGAGCTTGATGGCCACTGTTGTTGATAGCAAATTCAGCGTTGCTTTCTGCATAATTCTTGGATCACTTTCTGTTGCCTTCTCAGACGTGGTTGTAGATTCCATGGTTGTGGAGAGGGCTCGTGGTGAGTCACAAAGCATGTCAGGTTCTCTTCAGTCTTTGTGTTGGGGATCTTCTGCTTTTGGTGGAATTGTGAGTTCTTATTTTAGCGGCTCCTTGGTGGATGCTTACGGTGTAAGGTTTGTTTTTGGTGTCACGGCTTTGCTACCACTGATGACATCTGCAGTTGCTATTATTGTGAATGAGCAGCCTGTAATTGATGCAGCAAAGGAGCAAAATTTTCCTCTGGCTGGTCAAAACTTGCTTGAAAGCTGGAAACAGAATGTTCTTCAGTTAAGGGATGCTGTTAGGCAACCCAATGTATTTTTTCCGACGCTGTTTATTTTCCTTTGGCAGGCAACCCCTCACTCAGAGTCTGCCATGTTTTACTTCACCACAAATAAACTTGGTTTTACCCCAGAATTCCTTGGACGTGTCAAGCTTGTTACCTCAATAGCGTCATTGCTTGGTGTTGGACTGTATAATGGATTTTTGAAAACTGTTCCACTGCAGAAGACTTTTCTAGTAACAACTGTTTTTGGTTCAGCTATTGGGTTGACTCAGGTTCTCCTTGTTACGGGATTAAACCGAAAATTTGGTATAAGTAATGAGTGGTTTGCAATGGGGGATTCATTGGTTATAACAGTTCTTAGTCAGGCTTCTTTCATGCCTGTTCTTGTGCTGGCTGCTAGATTATGTCCAGAGGGAGTGGAAGCAACACTTTTCGCAACCCTCATGTCCATATCAAATGCAGGGAGTGTTCTTGGGGGGCTGATGGGTGCTGGTCTGACCCAGCTCTTGGGTGTAACCAAGGACCAATATGATAACTTATCCCTTTTGATCATCTTGTGCAATCTCAGCTCCTTGTTGCCTTTACCACTCCTTGGCCTCCTTCCTCGGGATCAACCTGATGTGAAGCCGGAGGAGAGTGGATCAGATATTGAGATGAAATCTAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0006855 GO:0008150 GO:0008509 GO:0008514 GO:0008517 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0015075 GO:0015231 GO:0015238 GO:0015318 GO:0015350 GO:0015711 GO:0015849 GO:0015884 GO:0015885 GO:0015893 GO:0022857 GO:0031967 GO:0031975 GO:0034220 GO:0035461 GO:0042221 GO:0042493 GO:0042886 GO:0042887 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051180 GO:0051181 GO:0051234 GO:0051958 GO:0055085 GO:0071702 GO:0071705 GO:0072337 GO:0072349 GO:0090482 GO:0098656 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BT1

Protein Analysis

565

Amino Acids

61.22

Weight (kDa)

9.03

Isoelectric Point (pI)

49.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BT1	PF03092	142 - 554	3.7e-147	BT1 family
MFS_1	PF07690	148 - 501	7.2e-16	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009095)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32040 AT2G32040
fragaria_vesca	FvH4_4g16240 FvH4_4g16240 FvH4_4g16240 FvH4_4g16240
malus_domestica	MD16G1195900.v1.1
prunus_persica	Prupe.1G015900_v2.0.a1 Prupe.1G015900_v2.0.a1
pyrus_communis	pycom13g16740 pycom16g16510
rosa_chinensis	RchiOBHm_Chr4g0415811
rosa_laevigata	RLG00000008038
rosa_multiflora	Rmu_sc0002438.1_g000028
rosa_roxburghii	Rroxscaffold_5G00359660
rosa_rugosa	Rorug04G0136800 Rorug04G0136800
rosa_samantha	Rh4AG198000 Rh4BG196100 Rh4CG209100 Rh4DG195800
rosa_wichuraiana	Rw4G016800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1376
AasI	GACNNNNNNGTC	1 cut(s)	203
AccB1I	GGYRCC	1 cut(s)	137
AccB7I	CCANNNNNTGG	3 cut(s)	581, 1534, 1619
AccI	GTMKAC	1 cut(s)	549
AccIII	TCCGGA	1 cut(s)	187
AciI	CCGC	5 cut(s)	109, 172, 314, 513, 846
AclWI	GGATC	6 cut(s)	100, 113, 706, 814, 1644, 1675
AcoI	YGGCCR	1 cut(s)	648
AcsI	RAATTY	5 cut(s)	366, 668, 973, 1157, 1328
AcuI	CTGAAG	2 cut(s)	773, 1010
AcyI	GRCGYC	1 cut(s)	138
AfaI	GTAC	2 cut(s)	416, 602
AflIII	ACRYGT	2 cut(s)	198, 1168
AgsI	TTSAA	4 cut(s)	24, 425, 1004, 1231
AjiI	CACGTC	2 cut(s)	724, 1169
AjnI	CCWGG	2 cut(s)	269, 635
AloI	GAACNNNNNNTCC	2 cut(s)	185, 217
AluBI	AGCT	8 cut(s)	181, 503, 642, 1008, 1177, 1283, 1531, 1596
AluI	AGCT	8 cut(s)	181, 503, 642, 1008, 1177, 1283, 1531, 1596
Alw26I	GTCTC	1 cut(s)	491
AlwI	GGATC	6 cut(s)	100, 113, 706, 814, 1644, 1675
AlwNI	CAGNNNCTG	1 cut(s)	1112
Ama87I	CYCGRG	2 cut(s)	40, 1632
Aor13HI	TCCGGA	1 cut(s)	187
AoxI	GGCC	4 cut(s)	254, 436, 648, 1621
ApeKI	GCWGC	3 cut(s)	943, 959, 1421
ApoI	RAATTY	5 cut(s)	366, 668, 973, 1157, 1328
Asp700I	GAANNNNTTC	1 cut(s)	368
AspLEI	GCGC	1 cut(s)	140
AspS9I	GGNCC	2 cut(s)	254, 1549
AsuC2I	CCSGG	1 cut(s)	491
AsuHPI	GGTGA	3 cut(s)	69, 773, 1120
AvaI	CYCGRG	2 cut(s)	40, 1632
AvaII	GGWCC	1 cut(s)	1549
BaeGI	GKGCMC	1 cut(s)	389
BalI	TGGCCA	1 cut(s)	650
BamHI	GGATCC	1 cut(s)	105
BanI	GGYRCC	1 cut(s)	137
BanII	GRGCYC	3 cut(s)	154, 172, 757
BauI	CACGAG	1 cut(s)	756
BbsI	GAAGAC	1 cut(s)	1256
BbvI	GCAGC	3 cut(s)	955, 971, 1408
BccI	CCATC	2 cut(s)	640, 1504
BceAI	ACGGC	3 cut(s)	194, 241, 909
BciT130I	CCWGG	2 cut(s)	271, 637
BciVI	GTATCC	1 cut(s)	643
BclI	TGATCA	1 cut(s)	1575
BcnI	CCSGG	1 cut(s)	491
BcoDI	GTCTC	1 cut(s)	491
BfaI	CTAG	4 cut(s)	434, 1259, 1425, 1689
BfmI	CTRYAG	2 cut(s)	918, 1244
BfoI	RGCGCY	1 cut(s)	141
BfuI	GTATCC	1 cut(s)	643
BisI	GCNGC	6 cut(s)	315, 514, 847, 944, 960, 1422
BlsI	GCNGC	6 cut(s)	316, 515, 848, 945, 961, 1423
Bme1390I	CCNGG	3 cut(s)	271, 491, 637
Bme18I	GGWCC	1 cut(s)	1549
BmeT110I	CYCGRG	2 cut(s)	40, 1632
BmgBI	CACGTC	2 cut(s)	724, 1169
BmgT120I	GGNCC	2 cut(s)	254, 1549
BmiI	GGNNCC	3 cut(s)	107, 139, 850
BmrFI	CCNGG	3 cut(s)	271, 491, 637
BmsI	GCATC	4 cut(s)	490, 850, 946, 1027
BpiI	GAAGAC	1 cut(s)	1256
BpmI	CTGGAG	1 cut(s)	658
BpuMI	CCSGG	1 cut(s)	491
BsaBI	GATNNNNATC	1 cut(s)	480
BsaHI	GRCGYC	1 cut(s)	138
BsaWI	WCCGGW	1 cut(s)	187
Bse118I	RCCGGY	1 cut(s)	234
Bse3DI	GCAATG	2 cut(s)	1196, 1362
Bse8I	GATNNNNATC	1 cut(s)	480
BseAI	TCCGGA	1 cut(s)	187
BseBI	CCWGG	2 cut(s)	271, 637
BseGI	GGATG	3 cut(s)	292, 865, 1042
BseJI	GATNNNNATC	1 cut(s)	480
BseMI	GCAATG	2 cut(s)	1196, 1362
BseMII	CTCAG	5 cut(s)	486, 732, 1119, 1310, 1606
BseRI	GAGGAG	2 cut(s)	72, 1673
BseSI	GKGCMC	1 cut(s)	389
BseXI	GCAGC	3 cut(s)	955, 971, 1408
BseYI	CCCAGC	1 cut(s)	1527
BsgI	GTGCAG	2 cut(s)	106, 648
BshFI	GGCC	4 cut(s)	256, 438, 650, 1623
BshNI	GGYRCC	1 cut(s)	137
BsiHKCI	CYCGRG	2 cut(s)	40, 1632
BsiSI	CCGG	7 cut(s)	112, 135, 175, 188, 235, 491, 1655
BslFI	GGGAC	2 cut(s)	83, 197
BsmAI	GTCTC	1 cut(s)	491
BsmFI	GGGAC	2 cut(s)	83, 197
BsnI	GGCC	4 cut(s)	256, 438, 650, 1623
BsoBI	CYCGRG	2 cut(s)	40, 1632
Bsp1286I	GDGCHC	4 cut(s)	154, 172, 389, 757
Bsp13I	TCCGGA	1 cut(s)	187
Bsp143I	GATC	6 cut(s)	105, 698, 806, 1575, 1636, 1667
Bsp19I	CCATGG	3 cut(s)	408, 530, 738
BspACI	CCGC	5 cut(s)	109, 172, 314, 513, 846
BspANI	GGCC	4 cut(s)	256, 438, 650, 1623
BspCNI	CTCAG	5 cut(s)	487, 731, 1118, 1309, 1605
BspEI	TCCGGA	1 cut(s)	187
BspLI	GGNNCC	3 cut(s)	107, 139, 850
BspMAI	CTGCAG	2 cut(s)	922, 1248
BspPI	GGATC	6 cut(s)	100, 113, 706, 814, 1644, 1675
BspT107I	GGYRCC	1 cut(s)	137
BsrDI	GCAATG	2 cut(s)	1196, 1362
BsrFI	RCCGGY	1 cut(s)	234
BssAI	RCCGGY	1 cut(s)	234
BssMI	GATC	6 cut(s)	105, 698, 806, 1575, 1636, 1667
BssNAI	GTATAC	1 cut(s)	550
BssNI	GRCGYC	1 cut(s)	138
BssSI	CACGAG	1 cut(s)	756
BssT1I	CCWWGG	7 cut(s)	408, 530, 738, 852, 1162, 1545, 1618
Bst1107I	GTATAC	1 cut(s)	550
Bst2BI	CACGAG	1 cut(s)	756
Bst2UI	CCWGG	2 cut(s)	271, 637
Bst4CI	ACNGT	7 cut(s)	554, 655, 869, 1215, 1237, 1270, 1381
Bst6I	CTCTTC	1 cut(s)	792
BstACI	GRCGYC	1 cut(s)	138
BstAPI	GCANNNNNTGC	1 cut(s)	449
BstC8I	GCNNGC	8 cut(s)	154, 172, 236, 319, 323, 450, 1092, 1419
BstDEI	CTNAG	6 cut(s)	495, 718, 1105, 1296, 1385, 1592
BstDSI	CCRYGG	3 cut(s)	408, 530, 738
BstEII	GGTNACC	1 cut(s)	584
BstENI	CCTNNNNNAGG	1 cut(s)	1088
BstF5I	GGATG	3 cut(s)	292, 865, 1042
BstH2I	RGCGCY	1 cut(s)	141
BstHHI	GCGC	1 cut(s)	140
BstKTI	GATC	6 cut(s)	108, 701, 809, 1578, 1639, 1670
BstMAI	GTCTC	1 cut(s)	491
BstMBI	GATC	6 cut(s)	105, 698, 806, 1575, 1636, 1667
BstMWI	GCNNNNNNNGC	4 cut(s)	449, 500, 672, 1593
BstNI	CCWGG	2 cut(s)	271, 637
BstNSI	RCATGY	3 cut(s)	202, 325, 778
BstPI	GGTNACC	1 cut(s)	584
BstSCI	CCNGG	3 cut(s)	269, 489, 635
BstSFI	CTRYAG	2 cut(s)	918, 1244
BstSLI	GKGCMC	1 cut(s)	389
BstV1I	GCAGC	3 cut(s)	955, 971, 1408
BstV2I	GAAGAC	1 cut(s)	1256
BstX2I	RGATCY	2 cut(s)	105, 806
BstXI	CCANNNNNNTGG	1 cut(s)	745
BstYI	RGATCY	2 cut(s)	105, 806
BstZ17I	GTATAC	1 cut(s)	550
BsuI	GTATCC	1 cut(s)	643
BsuRI	GGCC	4 cut(s)	256, 438, 650, 1623
BtgI	CCRYGG	3 cut(s)	408, 530, 738
BtrI	CACGTC	2 cut(s)	724, 1169
BtsCI	GGATG	3 cut(s)	292, 865, 1042
BtsI	GCAGTG	2 cut(s)	364, 1241
BtsIMutI	CAGTG	4 cut(s)	364, 651, 905, 1241
Cac8I	GCNNGC	8 cut(s)	154, 172, 236, 319, 323, 450, 1092, 1419
CaiI	CAGNNNCTG	1 cut(s)	1112
CfoI	GCGC	1 cut(s)	140
Cfr10I	RCCGGY	1 cut(s)	234
Cfr13I	GGNCC	2 cut(s)	254, 1549
CseI	GACGC	2 cut(s)	1078, 1182
Csp6I	GTAC	2 cut(s)	415, 601
CspCI	CAANNNNNGTGG	2 cut(s)	640, 675
CviQI	GTAC	2 cut(s)	415, 601
DdeI	CTNAG	6 cut(s)	495, 718, 1105, 1296, 1385, 1592
DinI	GGCGCC	1 cut(s)	139
DpnI	GATC	6 cut(s)	107, 700, 808, 1577, 1638, 1669
DpnII	GATC	6 cut(s)	105, 698, 806, 1575, 1636, 1667
DraI	TTTAAA	1 cut(s)	468
DrdI	GACNNNNNNGTC	1 cut(s)	203
DseDI	GACNNNNNNGTC	1 cut(s)	203
EaeI	YGGCCR	1 cut(s)	648
Eam1104I	CTCTTC	1 cut(s)	792
EarI	CTCTTC	1 cut(s)	792
EciI	GGCGGA	1 cut(s)	98
Eco130I	CCWWGG	7 cut(s)	408, 530, 738, 852, 1162, 1545, 1618
Eco147I	AGGCCT	1 cut(s)	438
Eco24I	GRGCYC	3 cut(s)	154, 172, 757
Eco47I	GGWCC	1 cut(s)	1549
Eco57I	CTGAAG	2 cut(s)	773, 1010
Eco88I	CYCGRG	2 cut(s)	40, 1632
Eco91I	GGTNACC	1 cut(s)	584
EcoNI	CCTNNNNNAGG	1 cut(s)	1088
EcoO65I	GGTNACC	1 cut(s)	584
EcoRI	GAATTC	1 cut(s)	1157
EcoRII	CCWGG	2 cut(s)	269, 635
EcoT14I	CCWWGG	7 cut(s)	408, 530, 738, 852, 1162, 1545, 1618
EcoT38I	GRGCYC	3 cut(s)	154, 172, 757
EgeI	GGCGCC	1 cut(s)	139
EheI	GGCGCC	1 cut(s)	139
ErhI	CCWWGG	7 cut(s)	408, 530, 738, 852, 1162, 1545, 1618
FalI	AAGNNNNNCTT	4 cut(s)	310, 342, 1440, 1472
FaqI	GGGAC	2 cut(s)	83, 197
FauI	CCCGC	1 cut(s)	179
FbaI	TGATCA	1 cut(s)	1575
FblI	GTMKAC	1 cut(s)	549
Fnu4HI	GCNGC	6 cut(s)	315, 514, 847, 944, 960, 1422
FokI	GGATG	3 cut(s)	299, 872, 1049
FriOI	GRGCYC	3 cut(s)	154, 172, 757
Fsp4HI	GCNGC	6 cut(s)	315, 514, 847, 944, 960, 1422
FspBI	CTAG	4 cut(s)	434, 1259, 1425, 1689
GlaI	GCGC	1 cut(s)	139
GluI	GCNGC	6 cut(s)	315, 514, 847, 944, 960, 1422
GsaI	CCCAGC	1 cut(s)	1531
GsuI	CTGGAG	1 cut(s)	658
HaeII	RGCGCY	1 cut(s)	141
HaeIII	GGCC	4 cut(s)	256, 438, 650, 1623
HapII	CCGG	7 cut(s)	112, 135, 175, 188, 235, 491, 1655
HgaI	GACGC	2 cut(s)	1078, 1182
HhaI	GCGC	1 cut(s)	140
Hin1I	GRCGYC	1 cut(s)	138
Hin6I	GCGC	1 cut(s)	138
HinP1I	GCGC	1 cut(s)	138
HincII	GTYRAC	1 cut(s)	1293
HindII	GTYRAC	1 cut(s)	1293
HindIII	AAGCTT	2 cut(s)	179, 1175
HinfI	GANTC	7 cut(s)	5, 566, 734, 764, 1109, 1294, 1364
HpaII	CCGG	7 cut(s)	112, 135, 175, 188, 235, 491, 1655
HphI	GGTGA	3 cut(s)	69, 773, 1120
Hpy166II	GTNNAC	3 cut(s)	415, 550, 1293
Hpy188I	TCNGA	6 cut(s)	105, 721, 1068, 1108, 1524, 1672
Hpy188III	TCNNGA	5 cut(s)	42, 188, 485, 1436, 1634
Hpy8I	GTNNAC	3 cut(s)	415, 550, 1293
Hpy99I	CGWCG	4 cut(s)	165, 209, 254, 1072
HpyAV	CCTTC	5 cut(s)	141, 336, 585, 724, 1637
HpyCH4III	ACNGT	7 cut(s)	554, 655, 869, 1215, 1237, 1270, 1381
HpyCH4IV	ACGT	3 cut(s)	163, 723, 1168
HpyF10VI	GCNNNNNNNGC	4 cut(s)	449, 500, 672, 1593
HpyF3I	CTNAG	6 cut(s)	495, 718, 1105, 1296, 1385, 1592
HpySE526I	ACGT	3 cut(s)	163, 723, 1168
Hsp92I	GRCGYC	1 cut(s)	138
HspAI	GCGC	1 cut(s)	138
KasI	GGCGCC	1 cut(s)	137
Kpn2I	TCCGGA	1 cut(s)	187
KroI	GCCGGC	1 cut(s)	234
KroNI	GCCGGC	1 cut(s)	236
Ksp22I	TGATCA	1 cut(s)	1575
Kzo9I	GATC	6 cut(s)	105, 698, 806, 1575, 1636, 1667
LmnI	GCTCC	4 cut(s)	639, 854, 967, 1601
Lsp1109I	GCAGC	3 cut(s)	955, 971, 1408
LweI	GCATC	4 cut(s)	490, 850, 946, 1027
MaeI	CTAG	4 cut(s)	434, 1259, 1425, 1689
MaeII	ACGT	3 cut(s)	163, 723, 1168
MaeIII	GTNAC	8 cut(s)	6, 584, 765, 889, 1180, 1261, 1309, 1540
MalI	GATC	6 cut(s)	107, 700, 808, 1577, 1638, 1669
MboI	GATC	6 cut(s)	105, 698, 806, 1575, 1636, 1667
MboII	GAAGA	4 cut(s)	779, 801, 1016, 1261
MflI	RGATCY	2 cut(s)	105, 806
MhlI	GDGCHC	4 cut(s)	154, 172, 389, 757
MlsI	TGGCCA	1 cut(s)	650
MluNI	TGGCCA	1 cut(s)	650
Mly113I	GGCGCC	1 cut(s)	138
MlyI	GAGTC	4 cut(s)	14, 773, 1118, 1288
MmeI	TCCRAC	2 cut(s)	1091, 1189
Mox20I	TGGCCA	1 cut(s)	650
MroI	TCCGGA	1 cut(s)	187
MroNI	GCCGGC	1 cut(s)	234
MroXI	GAANNNNTTC	1 cut(s)	368
MscI	TGGCCA	1 cut(s)	650
MseI	TTAA	4 cut(s)	467, 540, 1031, 1319
MslI	CAYNNNNRTG	1 cut(s)	743
Msp20I	TGGCCA	1 cut(s)	650
MspA1I	CMGCKG	1 cut(s)	503
MspI	CCGG	7 cut(s)	112, 135, 175, 188, 235, 491, 1655
MspR9I	CCNGG	3 cut(s)	271, 491, 637
MvaI	CCWGG	2 cut(s)	271, 637
MwoI	GCNNNNNNNGC	4 cut(s)	449, 500, 672, 1593
NaeI	GCCGGC	1 cut(s)	236
NarI	GGCGCC	1 cut(s)	138
NciI	CCSGG	1 cut(s)	491
NcoI	CCATGG	3 cut(s)	408, 530, 738
NdeII	GATC	6 cut(s)	105, 698, 806, 1575, 1636, 1667
NgoMIV	GCCGGC	1 cut(s)	234
NlaIV	GGNNCC	3 cut(s)	107, 139, 850
NmuCI	GTSAC	3 cut(s)	6, 765, 889
NspI	RCATGY	3 cut(s)	202, 325, 778
PaeI	GCATGC	1 cut(s)	325
PceI	AGGCCT	1 cut(s)	438
PciI	ACATGT	1 cut(s)	198
PcsI	WCGNNNNNNNCGW	3 cut(s)	160, 201, 246
PdiI	GCCGGC	1 cut(s)	236
PdmI	GAANNNNTTC	1 cut(s)	368
PfeI	GAWTC	3 cut(s)	566, 734, 1364
PflMI	CCANNNNNTGG	3 cut(s)	581, 1534, 1619
PfoI	TCCNGGA	2 cut(s)	269, 635
PkrI	GCNGC	6 cut(s)	316, 515, 848, 945, 961, 1423
PleI	GAGTC	4 cut(s)	13, 772, 1117, 1288
PluTI	GGCGCC	1 cut(s)	141
PpsI	GAGTC	4 cut(s)	13, 772, 1117, 1288
PscI	ACATGT	1 cut(s)	198
PsiI	TTATAA	1 cut(s)	1376
Psp6I	CCWGG	2 cut(s)	269, 635
PspEI	GGTNACC	1 cut(s)	584
PspFI	CCCAGC	1 cut(s)	1527
PspGI	CCWGG	2 cut(s)	269, 635
PspN4I	GGNNCC	3 cut(s)	107, 139, 850
PspPI	GGNCC	2 cut(s)	254, 1549
PstI	CTGCAG	2 cut(s)	922, 1248
PstNI	CAGNNNCTG	1 cut(s)	1112
PsuI	RGATCY	2 cut(s)	105, 806
PvuII	CAGCTG	1 cut(s)	503
RsaI	GTAC	2 cut(s)	416, 602
RsaNI	GTAC	2 cut(s)	415, 601
RseI	CAYNNNNRTG	1 cut(s)	743
SaqAI	TTAA	4 cut(s)	467, 540, 1031, 1319
SatI	GCNGC	6 cut(s)	315, 514, 847, 944, 960, 1422
Sau3AI	GATC	6 cut(s)	105, 698, 806, 1575, 1636, 1667
Sau96I	GGNCC	2 cut(s)	254, 1549
SchI	GAGTC	4 cut(s)	14, 773, 1118, 1288
ScrFI	CCNGG	3 cut(s)	271, 491, 637
SduI	GDGCHC	4 cut(s)	154, 172, 389, 757
SfaNI	GCATC	4 cut(s)	490, 850, 946, 1027
SfcI	CTRYAG	2 cut(s)	918, 1244
SfoI	GGCGCC	1 cut(s)	139
SinI	GGWCC	1 cut(s)	1549
SmiMI	CAYNNNNRTG	1 cut(s)	743
SphI	GCATGC	1 cut(s)	325
SseBI	AGGCCT	1 cut(s)	438
SsiI	CCGC	5 cut(s)	109, 172, 314, 513, 846
SspDI	GGCGCC	1 cut(s)	137
SspMI	CTAG	4 cut(s)	434, 1259, 1425, 1689
StuI	AGGCCT	1 cut(s)	438
StyD4I	CCNGG	3 cut(s)	269, 489, 635
StyI	CCWWGG	7 cut(s)	408, 530, 738, 852, 1162, 1545, 1618
TaaI	ACNGT	7 cut(s)	554, 655, 869, 1215, 1237, 1270, 1381
TaiI	ACGT	3 cut(s)	166, 726, 1171
TaqI	TCGA	2 cut(s)	240, 378
TatI	WGTACW	1 cut(s)	414
TauI	GCSGC	3 cut(s)	317, 516, 849
TfiI	GAWTC	3 cut(s)	566, 734, 1364
Tru1I	TTAA	4 cut(s)	467, 540, 1031, 1319
Tru9I	TTAA	4 cut(s)	467, 540, 1031, 1319
TscAI	CASTG	4 cut(s)	364, 658, 912, 1248
TseFI	GTSAC	3 cut(s)	6, 765, 889
TseI	GCWGC	3 cut(s)	943, 959, 1421
Tsp45I	GTSAC	3 cut(s)	6, 765, 889
TspDTI	ATGAA	2 cut(s)	1356, 1390
TspGWI	ACGGA	1 cut(s)	193
TspRI	CASTG	4 cut(s)	364, 658, 912, 1248
Van91I	CCANNNNNTGG	3 cut(s)	581, 1534, 1619
VpaK11BI	GGWCC	1 cut(s)	1549
XagI	CCTNNNNNAGG	1 cut(s)	1088
XapI	RAATTY	5 cut(s)	366, 668, 973, 1157, 1328
XceI	RCATGY	3 cut(s)	202, 325, 778
XmiI	GTMKAC	1 cut(s)	549
XmnI	GAANNNNTTC	1 cut(s)	368
XspI	CTAG	4 cut(s)	434, 1259, 1425, 1689

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.