Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0009095

Physical Location & Seq

Genomic Coordinates Reverse (-)

12498539 .. 12502240

Gene Structure 3702 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g16740.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGGGGGTACTTACGTCATTCCATTATCGCGATATAGAAACGTTTAGAATCATCACACGGAAGAAAAAGCGTGCAAGTACACTTGTGGTATTAAATAATTTTCGAATGGAGTCACCAACTTTTTGTGCAATCTCAATCTTGCCCTCGGGAAATCCAATTTTGTCCTCGGCCTCCTTCGCTCCACCTCCTCCACCACGCTTCGTCCCTCGGATCCACCGGAAGCCGTGCACTCTCGTATCCGGCGCCCACAGAAGAACTCGCCTCCGACGCAGAGCCCGCCGGAAGCTTCCTCCCGAGAACGACATGTCAGTCGCCGTCCCGATGCCATCGTCCCCTCGCCGGCTCGACTTGGACCACGAGTCGTTCCTCGATTCCAGGATTAGTGCAGGAGAAAGGGATGTGTTGATAACTGATAGGGAAAAAGAGGAAAGCATGCCTTCTCCAAGCAAGACCAAACATAGAACGAGCACTGTGAAATTTTTTGGGGTCGAATTGTGCCCTGACAATGTGGCTGTTGCCATGGTGTATTTTGTACAAGGTGTTCTAGGCCTTGCAAGGCTTGCTGTCAGTTTTTATTTAAAAGACGATTTGCATCTCGACCCGGCTGAGACAGCTGTGATTACCGGCTTTTCTGCGTTGCCATGGCTGATCAAACCTATATACGGTTTTGTTAGCGATTCTGTGCCACTATTTGGTTACCGAAGAAGGTCATACTTGATTTTGTCAGGGCTTCTTGGTGCAGTGTCATGGAGTTTGATGGCCACTGTTGTTGATAACAAATTCAGTGTTGCTTTCTGCATAATTCTTGGATCTCTATCTGTTGCCTTTTCAGATGTGGTTGTAGATTCCATGGTTGTGGAGAGGGCTCGTGGTGAGTCACAAAGCATGTCAGGTTCTCTTCAGTCTTTGTGTTGGCGATCTTCTGCTTTTGGTGGAATCGTGAGTTCCTATTTTAGCGGCTCCTTGGTGGATGCTTACGGTGTAAGGTTTGTTTTTGGTCTCACGGCTTTGCTGCCACTGATGACATCTGCAGTTTCTGTTCTTGTGAATGAGCAGCCTGTGATTGGTGCCTCGAAGGGGCCAAATTTTCCTCTGGCTGGTCATAACTTGCTTGATAGCTGGAAAAAGAATGTTCTTCAGCTATGGGATGCTGTTAGGCAACCCAATGTATTTTTTCCCACGTTATTTATTTTCCTGTGGCAGGCAACCCCTCACTCAGAGTCTGCAATGTTTTACTTCACCACAAATAAACTTGGTTTTACCCCAGAGTTCTTAGGACGTGTCAAGCTTGTTACCTCTGTGGCATCATTGCTTGGGGTTGGACTGTATAATGGATTTTTGAAAACTGTTCCATTGCGGAAGACTTTTGTAGTAACAACTGTTTTTGGTTCAGCTATTGGGTTGACTCAGGTTCTCCTTGTTACTGGATTAAACAGAAAATTCGGGATAAGCGATGAGTGGTTTTCGCTTGGGGATTCTTTGGTCATAACAGTTCTCAGTCAGGCTTCTTTCATGCCTGTTCTTGTGCTGGCTGCTAGATTATGCCCGGAGGGAGTGGAAGCAACACTTTTCGCAACCCTCATGTCCATTTCAAATGCTGGGAGTGTTCTTGGGGGGCTGATGGGTGCTGGTCTGACCCAACTCTTGGGTGTAACCAAGGACCAATATGATAACTTGTCCCTTTTGATCGATCATCTGCAATCTCAGCTCCTTGTTGCCTTTACCACTCCTTGGCCTCCTTCCGCGGGATCATCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0006855 GO:0008150 GO:0008509 GO:0008514 GO:0008517 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0015075 GO:0015231 GO:0015238 GO:0015318 GO:0015350 GO:0015711 GO:0015849 GO:0015884 GO:0015885 GO:0015893 GO:0022857 GO:0031967 GO:0031975 GO:0034220 GO:0035461 GO:0042221 GO:0042493 GO:0042886 GO:0042887 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051180 GO:0051181 GO:0051234 GO:0051958 GO:0055085 GO:0071702 GO:0071705 GO:0072337 GO:0072349 GO:0090482 GO:0098656 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BT1

Protein Analysis

586

Amino Acids

63.92

Weight (kDa)

9.6

Isoelectric Point (pI)

48.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009095)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32040 AT2G32040
fragaria_vesca	FvH4_4g16240 FvH4_4g16240 FvH4_4g16240 FvH4_4g16240
malus_domestica	MD16G1195900.v1.1
prunus_persica	Prupe.1G015900_v2.0.a1 Prupe.1G015900_v2.0.a1
pyrus_communis	pycom13g16740 pycom16g16510
rosa_chinensis	RchiOBHm_Chr4g0415811
rosa_laevigata	RLG00000008038
rosa_multiflora	Rmu_sc0002438.1_g000028
rosa_roxburghii	Rroxscaffold_5G00359660
rosa_rugosa	Rorug04G0136800 Rorug04G0136800
rosa_samantha	Rh4AG198000 Rh4BG196100 Rh4CG209100 Rh4DG195800
rosa_wichuraiana	Rw4G016800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	308
AccB1I	GGYRCC	2 cut(s)	242, 1067
AccB7I	CCANNNNNTGG	3 cut(s)	692, 1645, 1731
AccII	CGCG	2 cut(s)	30, 1745
AciI	CCGC	5 cut(s)	277, 957, 1357, 1743, 1745
AclI	AACGTT	1 cut(s)	41
AclWI	GGATC	4 cut(s)	205, 218, 817, 1756
AcoI	YGGCCR	1 cut(s)	759
AcsI	RAATTY	4 cut(s)	476, 779, 1084, 1439
AcuI	CTGAAG	2 cut(s)	884, 1121
AcyI	GRCGYC	1 cut(s)	243
AfaI	GTAC	3 cut(s)	9, 79, 534
AflIII	ACRYGT	2 cut(s)	303, 1279
AgsI	TTSAA	2 cut(s)	1342, 1593
AhdI	GACNNNNNGTC	1 cut(s)	358
AjiI	CACGTC	1 cut(s)	1280
AjnI	CCWGG	1 cut(s)	374
AluBI	AGCT	7 cut(s)	286, 614, 1119, 1141, 1288, 1394, 1708
AluI	AGCT	7 cut(s)	286, 614, 1119, 1141, 1288, 1394, 1708
Alw21I	GWGCWC	2 cut(s)	230, 470
Alw26I	GTCTC	2 cut(s)	602, 1004
Alw44I	GTGCAC	1 cut(s)	226
AlwI	GGATC	4 cut(s)	205, 218, 817, 1756
AlwNI	CAGNNNCTG	2 cut(s)	1037, 1223
Ama87I	CYCGRG	2 cut(s)	145, 293
AoxI	GGCC	5 cut(s)	168, 547, 759, 1079, 1733
ApaLI	GTGCAC	1 cut(s)	226
ApeKI	GCWGC	3 cut(s)	1012, 1054, 1532
ApoI	RAATTY	4 cut(s)	476, 779, 1084, 1439
AspLEI	GCGC	1 cut(s)	245
AspS9I	GGNCC	3 cut(s)	352, 1079, 1660
AsuC2I	CCSGG	2 cut(s)	602, 1547
AsuHPI	GGTGA	3 cut(s)	105, 884, 1231
AsuII	TTCGAA	1 cut(s)	103
AvaI	CYCGRG	2 cut(s)	145, 293
AvaII	GGWCC	2 cut(s)	352, 1660
BaeGI	GKGCMC	2 cut(s)	230, 500
BaeI	ACNNNNGTAYC	3 cut(s)	32, 219, 252
BalI	TGGCCA	1 cut(s)	761
BamHI	GGATCC	1 cut(s)	210
BanI	GGYRCC	2 cut(s)	242, 1067
BanII	GRGCYC	2 cut(s)	277, 868
BauI	CACGAG	2 cut(s)	356, 867
BbsI	GAAGAC	1 cut(s)	1367
Bbv12I	GWGCWC	2 cut(s)	230, 470
BbvI	GCAGC	3 cut(s)	999, 1066, 1519
BccI	CCATC	3 cut(s)	334, 751, 1615
BceAI	ACGGC	3 cut(s)	208, 299, 1020
BciT130I	CCWGG	1 cut(s)	376
BciVI	GTATCC	1 cut(s)	247
BclI	TGATCA	1 cut(s)	648
BcnI	CCSGG	2 cut(s)	602, 1547
BcoDI	GTCTC	2 cut(s)	602, 1004
BfaI	CTAG	2 cut(s)	545, 1536
BfmI	CTRYAG	1 cut(s)	1029
BfoI	RGCGCY	1 cut(s)	246
BfuI	GTATCC	1 cut(s)	247
BisI	GCNGC	4 cut(s)	958, 1013, 1055, 1533
BlsI	GCNGC	4 cut(s)	959, 1014, 1056, 1534
Bme1390I	CCNGG	3 cut(s)	376, 602, 1547
Bme18I	GGWCC	2 cut(s)	352, 1660
BmeRI	GACNNNNNGTC	1 cut(s)	358
BmeT110I	CYCGRG	2 cut(s)	145, 293
BmgBI	CACGTC	1 cut(s)	1280
BmgT120I	GGNCC	3 cut(s)	352, 1079, 1660
BmiI	GGNNCC	5 cut(s)	212, 244, 961, 1069, 1080
BmrFI	CCNGG	3 cut(s)	376, 602, 1547
BmsI	GCATC	5 cut(s)	312, 601, 961, 1138, 1313
BpiI	GAAGAC	1 cut(s)	1367
Bpu14I	TTCGAA	1 cut(s)	103
BpuMI	CCSGG	2 cut(s)	602, 1547
Bsa29I	ATCGAT	1 cut(s)	1689
BsaBI	GATNNNNATC	2 cut(s)	591, 814
BsaHI	GRCGYC	1 cut(s)	243
BsaI	GGTCTC	1 cut(s)	1004
BsaWI	WCCGGW	1 cut(s)	216
Bse118I	RCCGGY	2 cut(s)	339, 623
Bse1I	ACTGG	1 cut(s)	1429
Bse3DI	GCAATG	3 cut(s)	1233, 1307, 1352
Bse8I	GATNNNNATC	2 cut(s)	591, 814
BseBI	CCWGG	1 cut(s)	376
BseCI	ATCGAT	1 cut(s)	1689
BseGI	GGATG	4 cut(s)	403, 976, 1153, 1751
BseJI	GATNNNNATC	2 cut(s)	591, 814
BseMI	GCAATG	3 cut(s)	1233, 1307, 1352
BseMII	CTCAG	5 cut(s)	597, 1230, 1421, 1510, 1718
BseNI	ACTGG	1 cut(s)	1429
BseRI	GAGGAG	1 cut(s)	177
BseSI	GKGCMC	2 cut(s)	230, 500
BseXI	GCAGC	3 cut(s)	999, 1066, 1519
BseYI	CCCAGC	1 cut(s)	1598
BsgI	GTGCAG	2 cut(s)	405, 759
Bsh1236I	CGCG	2 cut(s)	30, 1745
BshFI	GGCC	5 cut(s)	170, 549, 761, 1081, 1735
BshNI	GGYRCC	2 cut(s)	242, 1067
BshVI	ATCGAT	1 cut(s)	1689
BsiHKAI	GWGCWC	2 cut(s)	230, 470
BsiHKCI	CYCGRG	2 cut(s)	145, 293
BsiSI	CCGG	7 cut(s)	217, 240, 280, 340, 602, 624, 1547
BslFI	GGGAC	4 cut(s)	188, 302, 316, 1663
BsmAI	GTCTC	2 cut(s)	602, 1004
BsmFI	GGGAC	4 cut(s)	188, 302, 316, 1663
BsnI	GGCC	5 cut(s)	170, 549, 761, 1081, 1735
Bso31I	GGTCTC	1 cut(s)	1004
BsoBI	CYCGRG	2 cut(s)	145, 293
Bsp119I	TTCGAA	1 cut(s)	103
Bsp1286I	GDGCHC	5 cut(s)	230, 277, 470, 500, 868
Bsp1407I	TGTACA	1 cut(s)	532
Bsp143I	GATC	7 cut(s)	210, 648, 809, 917, 1686, 1690, 1748
Bsp19I	CCATGG	3 cut(s)	519, 641, 849
Bsp68I	TCGCGA	1 cut(s)	30
BspACI	CCGC	5 cut(s)	277, 957, 1357, 1743, 1745
BspANI	GGCC	5 cut(s)	170, 549, 761, 1081, 1735
BspCNI	CTCAG	5 cut(s)	598, 1229, 1420, 1509, 1717
BspDI	ATCGAT	1 cut(s)	1689
BspFNI	CGCG	2 cut(s)	30, 1745
BspLI	GGNNCC	5 cut(s)	212, 244, 961, 1069, 1080
BspMAI	CTGCAG	1 cut(s)	1033
BspPI	GGATC	4 cut(s)	205, 218, 817, 1756
BspT104I	TTCGAA	1 cut(s)	103
BspT107I	GGYRCC	2 cut(s)	242, 1067
BspTNI	GGTCTC	1 cut(s)	1004
BsrDI	GCAATG	3 cut(s)	1233, 1307, 1352
BsrFI	RCCGGY	2 cut(s)	339, 623
BsrGI	TGTACA	1 cut(s)	532
BsrI	ACTGG	1 cut(s)	1429
BssAI	RCCGGY	2 cut(s)	339, 623
BssMI	GATC	7 cut(s)	210, 648, 809, 917, 1686, 1690, 1748
BssNI	GRCGYC	1 cut(s)	243
BssSI	CACGAG	2 cut(s)	356, 867
BssT1I	CCWWGG	6 cut(s)	519, 641, 849, 963, 1656, 1730
Bst2BI	CACGAG	2 cut(s)	356, 867
Bst2UI	CCWGG	1 cut(s)	376
Bst4CI	ACNGT	8 cut(s)	472, 665, 766, 980, 1326, 1348, 1381, 1492
Bst6I	CTCTTC	1 cut(s)	903
BstACI	GRCGYC	1 cut(s)	243
BstAPI	GCANNNNNTGC	1 cut(s)	560
BstAUI	TGTACA	1 cut(s)	532
BstBI	TTCGAA	1 cut(s)	103
BstC8I	GCNNGC	7 cut(s)	72, 277, 341, 434, 561, 1203, 1530
BstDEI	CTNAG	6 cut(s)	606, 1216, 1273, 1407, 1496, 1704
BstDSI	CCRYGG	4 cut(s)	519, 641, 849, 1743
BstEII	GGTNACC	1 cut(s)	695
BstENI	CCTNNNNNAGG	1 cut(s)	1199
BstF5I	GGATG	4 cut(s)	403, 976, 1153, 1751
BstFNI	CGCG	2 cut(s)	30, 1745
BstH2I	RGCGCY	1 cut(s)	246
BstHHI	GCGC	1 cut(s)	245
BstKTI	GATC	7 cut(s)	213, 651, 812, 920, 1689, 1693, 1751
BstMAI	GTCTC	2 cut(s)	602, 1004
BstMBI	GATC	7 cut(s)	210, 648, 809, 917, 1686, 1690, 1748
BstMWI	GCNNNNNNNGC	6 cut(s)	176, 267, 276, 560, 611, 1705
BstNI	CCWGG	1 cut(s)	376
BstNSI	RCATGY	3 cut(s)	307, 436, 889
BstPI	GGTNACC	1 cut(s)	695
BstSCI	CCNGG	3 cut(s)	374, 600, 1545
BstSFI	CTRYAG	1 cut(s)	1029
BstSLI	GKGCMC	2 cut(s)	230, 500
BstUI	CGCG	2 cut(s)	30, 1745
BstV1I	GCAGC	3 cut(s)	999, 1066, 1519
BstV2I	GAAGAC	1 cut(s)	1367
BstX2I	RGATCY	2 cut(s)	210, 809
BstXI	CCANNNNNNTGG	1 cut(s)	856
BstYI	RGATCY	2 cut(s)	210, 809
Bsu15I	ATCGAT	1 cut(s)	1689
BsuI	GTATCC	1 cut(s)	247
BsuRI	GGCC	5 cut(s)	170, 549, 761, 1081, 1735
BsuTUI	ATCGAT	1 cut(s)	1689
BtgI	CCRYGG	4 cut(s)	519, 641, 849, 1743
BtgZI	GCGATG	1 cut(s)	1467
BtrI	CACGTC	1 cut(s)	1280
BtsCI	GGATG	4 cut(s)	403, 976, 1153, 1751
BtsI	GCAGTG	1 cut(s)	747
BtsIMutI	CAGTG	5 cut(s)	468, 747, 762, 790, 1016
BtuMI	TCGCGA	1 cut(s)	30
Cac8I	GCNNGC	7 cut(s)	72, 277, 341, 434, 561, 1203, 1530
CaiI	CAGNNNCTG	2 cut(s)	1037, 1223
CfoI	GCGC	1 cut(s)	245
Cfr10I	RCCGGY	2 cut(s)	339, 623
Cfr13I	GGNCC	3 cut(s)	352, 1079, 1660
Cfr42I	CCGCGG	1 cut(s)	1746
ClaI	ATCGAT	1 cut(s)	1689
CseI	GACGC	1 cut(s)	276
Csp6I	GTAC	3 cut(s)	8, 78, 533
CspCI	CAANNNNNGTGG	2 cut(s)	751, 786
CviAII	CATG	9 cut(s)	304, 433, 520, 642, 747, 850, 886, 1513, 1582
CviQI	GTAC	3 cut(s)	8, 78, 533
DdeI	CTNAG	6 cut(s)	606, 1216, 1273, 1407, 1496, 1704
DinI	GGCGCC	1 cut(s)	244
DpnI	GATC	7 cut(s)	212, 650, 811, 919, 1688, 1692, 1750
DpnII	GATC	7 cut(s)	210, 648, 809, 917, 1686, 1690, 1748
DraI	TTTAAA	1 cut(s)	579
DrdI	GACNNNNNNGTC	1 cut(s)	308
DriI	GACNNNNNGTC	1 cut(s)	358
DseDI	GACNNNNNNGTC	1 cut(s)	308
EaeI	YGGCCR	1 cut(s)	759
Eam1104I	CTCTTC	1 cut(s)	903
Eam1105I	GACNNNNNGTC	1 cut(s)	358
EarI	CTCTTC	1 cut(s)	903
Eco130I	CCWWGG	6 cut(s)	519, 641, 849, 963, 1656, 1730
Eco147I	AGGCCT	1 cut(s)	549
Eco24I	GRGCYC	2 cut(s)	277, 868
Eco31I	GGTCTC	1 cut(s)	1004
Eco47I	GGWCC	2 cut(s)	352, 1660
Eco57I	CTGAAG	2 cut(s)	884, 1121
Eco88I	CYCGRG	2 cut(s)	145, 293
Eco91I	GGTNACC	1 cut(s)	695
EcoNI	CCTNNNNNAGG	1 cut(s)	1199
EcoO65I	GGTNACC	1 cut(s)	695
EcoRII	CCWGG	1 cut(s)	374
EcoT14I	CCWWGG	6 cut(s)	519, 641, 849, 963, 1656, 1730
EcoT38I	GRGCYC	2 cut(s)	277, 868
EgeI	GGCGCC	1 cut(s)	244
EheI	GGCGCC	1 cut(s)	244
ErhI	CCWWGG	6 cut(s)	519, 641, 849, 963, 1656, 1730
FaeI	CATG	9 cut(s)	307, 436, 523, 645, 750, 853, 889, 1516, 1585
FalI	AAGNNNNNCTT	4 cut(s)	421, 453, 1551, 1583
FaqI	GGGAC	4 cut(s)	188, 302, 316, 1663
FatI	CATG	9 cut(s)	303, 432, 519, 641, 746, 849, 885, 1512, 1581
FauI	CCCGC	2 cut(s)	284, 1738
FbaI	TGATCA	1 cut(s)	648
Fnu4HI	GCNGC	4 cut(s)	958, 1013, 1055, 1533
FokI	GGATG	4 cut(s)	410, 983, 1160, 1738
FriOI	GRGCYC	2 cut(s)	277, 868
Fsp4HI	GCNGC	4 cut(s)	958, 1013, 1055, 1533
FspBI	CTAG	2 cut(s)	545, 1536
GlaI	GCGC	1 cut(s)	244
GluI	GCNGC	4 cut(s)	958, 1013, 1055, 1533
GsaI	CCCAGC	1 cut(s)	1602
HaeII	RGCGCY	1 cut(s)	246
HaeIII	GGCC	5 cut(s)	170, 549, 761, 1081, 1735
HapII	CCGG	7 cut(s)	217, 240, 280, 340, 602, 624, 1547
HgaI	GACGC	1 cut(s)	276
HhaI	GCGC	1 cut(s)	245
Hin1I	GRCGYC	1 cut(s)	243
Hin1II	CATG	9 cut(s)	307, 436, 523, 645, 750, 853, 889, 1516, 1585
Hin6I	GCGC	1 cut(s)	243
HinP1I	GCGC	1 cut(s)	243
HincII	GTYRAC	1 cut(s)	1404
HindII	GTYRAC	1 cut(s)	1404
HindIII	AAGCTT	2 cut(s)	284, 1286
HpaII	CCGG	7 cut(s)	217, 240, 280, 340, 602, 624, 1547
HphI	GGTGA	3 cut(s)	105, 884, 1231
Hpy166II	GTNNAC	3 cut(s)	80, 228, 1404
Hpy188I	TCNGA	5 cut(s)	210, 266, 832, 1219, 1635
Hpy188III	TCNNGA	8 cut(s)	29, 147, 293, 319, 596, 940, 1444, 1755
Hpy8I	GTNNAC	3 cut(s)	80, 228, 1404
Hpy99I	CGWCG	1 cut(s)	270
HpyAV	CCTTC	5 cut(s)	184, 447, 699, 1069, 1749
HpyCH4III	ACNGT	8 cut(s)	472, 665, 766, 980, 1326, 1348, 1381, 1492
HpyCH4IV	ACGT	4 cut(s)	14, 41, 1181, 1279
HpyF10VI	GCNNNNNNNGC	6 cut(s)	176, 267, 276, 560, 611, 1705
HpyF3I	CTNAG	6 cut(s)	606, 1216, 1273, 1407, 1496, 1704
HpySE526I	ACGT	4 cut(s)	14, 41, 1181, 1279
Hsp92I	GRCGYC	1 cut(s)	243
Hsp92II	CATG	9 cut(s)	307, 436, 523, 645, 750, 853, 889, 1516, 1585
HspAI	GCGC	1 cut(s)	243
KasI	GGCGCC	1 cut(s)	242
KroI	GCCGGC	1 cut(s)	339
KroNI	GCCGGC	1 cut(s)	341
Ksp22I	TGATCA	1 cut(s)	648
KspI	CCGCGG	1 cut(s)	1746
Kzo9I	GATC	7 cut(s)	210, 648, 809, 917, 1686, 1690, 1748
LmnI	GCTCC	3 cut(s)	184, 965, 1713
Lsp1109I	GCAGC	3 cut(s)	999, 1066, 1519
LweI	GCATC	5 cut(s)	312, 601, 961, 1138, 1313
MaeI	CTAG	2 cut(s)	545, 1536
MaeII	ACGT	4 cut(s)	14, 41, 1181, 1279
MaeIII	GTNAC	7 cut(s)	111, 695, 876, 1291, 1372, 1420, 1651
MalI	GATC	7 cut(s)	212, 650, 811, 919, 1688, 1692, 1750
MboI	GATC	7 cut(s)	210, 648, 809, 917, 1686, 1690, 1748
MboII	GAAGA	7 cut(s)	73, 264, 714, 890, 912, 1127, 1372
MflI	RGATCY	2 cut(s)	210, 809
MhlI	GDGCHC	5 cut(s)	230, 277, 470, 500, 868
MlsI	TGGCCA	1 cut(s)	761
MluCI	AATT	8 cut(s)	97, 156, 476, 491, 779, 801, 1084, 1439
MluNI	TGGCCA	1 cut(s)	761
Mly113I	GGCGCC	1 cut(s)	243
MlyI	GAGTC	5 cut(s)	119, 368, 884, 1229, 1399
MmeI	TCCRAC	2 cut(s)	289, 1300
Mox20I	TGGCCA	1 cut(s)	761
MroNI	GCCGGC	1 cut(s)	339
MscI	TGGCCA	1 cut(s)	761
MseI	TTAA	3 cut(s)	92, 578, 1430
MslI	CAYNNNNRTG	1 cut(s)	854
Msp20I	TGGCCA	1 cut(s)	761
MspA1I	CMGCKG	2 cut(s)	614, 1745
MspI	CCGG	7 cut(s)	217, 240, 280, 340, 602, 624, 1547
MspR9I	CCNGG	3 cut(s)	376, 602, 1547
MvaI	CCWGG	1 cut(s)	376
MvnI	CGCG	2 cut(s)	30, 1745
MwoI	GCNNNNNNNGC	6 cut(s)	176, 267, 276, 560, 611, 1705
NaeI	GCCGGC	1 cut(s)	341
NarI	GGCGCC	1 cut(s)	243
NciI	CCSGG	2 cut(s)	602, 1547
NcoI	CCATGG	3 cut(s)	519, 641, 849
NdeII	GATC	7 cut(s)	210, 648, 809, 917, 1686, 1690, 1748
NgoMIV	GCCGGC	1 cut(s)	339
NlaIII	CATG	9 cut(s)	307, 436, 523, 645, 750, 853, 889, 1516, 1585
NlaIV	GGNNCC	5 cut(s)	212, 244, 961, 1069, 1080
NmeAIII	GCCGAG	1 cut(s)	146
NmuCI	GTSAC	2 cut(s)	111, 876
NruI	TCGCGA	1 cut(s)	30
NspI	RCATGY	3 cut(s)	307, 436, 889
NspV	TTCGAA	1 cut(s)	103
PaeI	GCATGC	1 cut(s)	436
PceI	AGGCCT	1 cut(s)	549
PciI	ACATGT	1 cut(s)	303
PcsI	WCGNNNNNNNCGW	1 cut(s)	1449
PdiI	GCCGGC	1 cut(s)	341
PfeI	GAWTC	6 cut(s)	48, 371, 677, 845, 936, 1475
PflMI	CCANNNNNTGG	3 cut(s)	692, 1645, 1731
PfoI	TCCNGGA	1 cut(s)	374
PkrI	GCNGC	4 cut(s)	959, 1014, 1056, 1534
PleI	GAGTC	5 cut(s)	118, 367, 883, 1228, 1399
PluTI	GGCGCC	1 cut(s)	246
PpsI	GAGTC	5 cut(s)	118, 367, 883, 1228, 1399
PscI	ACATGT	1 cut(s)	303
Psp1406I	AACGTT	1 cut(s)	41
Psp6I	CCWGG	1 cut(s)	374
PspEI	GGTNACC	1 cut(s)	695
PspFI	CCCAGC	1 cut(s)	1598
PspGI	CCWGG	1 cut(s)	374
PspN4I	GGNNCC	5 cut(s)	212, 244, 961, 1069, 1080
PspPI	GGNCC	3 cut(s)	352, 1079, 1660
PsrI	GAACNNNNNNTAC	2 cut(s)	525, 557
PstI	CTGCAG	1 cut(s)	1033
PstNI	CAGNNNCTG	2 cut(s)	1037, 1223
PsuI	RGATCY	2 cut(s)	210, 809
PvuII	CAGCTG	1 cut(s)	614
RruI	TCGCGA	1 cut(s)	30
RsaI	GTAC	3 cut(s)	9, 79, 534
RsaNI	GTAC	3 cut(s)	8, 78, 533
RseI	CAYNNNNRTG	1 cut(s)	854
SacII	CCGCGG	1 cut(s)	1746
SaqAI	TTAA	3 cut(s)	92, 578, 1430
SatI	GCNGC	4 cut(s)	958, 1013, 1055, 1533
Sau3AI	GATC	7 cut(s)	210, 648, 809, 917, 1686, 1690, 1748
Sau96I	GGNCC	3 cut(s)	352, 1079, 1660
SchI	GAGTC	5 cut(s)	119, 368, 884, 1229, 1399
ScrFI	CCNGG	3 cut(s)	376, 602, 1547
SduI	GDGCHC	5 cut(s)	230, 277, 470, 500, 868
SfaNI	GCATC	5 cut(s)	312, 601, 961, 1138, 1313
SfcI	CTRYAG	1 cut(s)	1029
SfoI	GGCGCC	1 cut(s)	244
Sfr303I	CCGCGG	1 cut(s)	1746
SfuI	TTCGAA	1 cut(s)	103
SgrBI	CCGCGG	1 cut(s)	1746
SinI	GGWCC	2 cut(s)	352, 1660
SmiMI	CAYNNNNRTG	1 cut(s)	854
SphI	GCATGC	1 cut(s)	436
Sse9I	AATT	8 cut(s)	97, 156, 476, 491, 779, 801, 1084, 1439
SseBI	AGGCCT	1 cut(s)	549
SsiI	CCGC	5 cut(s)	277, 957, 1357, 1743, 1745
SspDI	GGCGCC	1 cut(s)	242
SspMI	CTAG	2 cut(s)	545, 1536
StuI	AGGCCT	1 cut(s)	549
StyD4I	CCNGG	3 cut(s)	374, 600, 1545
StyI	CCWWGG	6 cut(s)	519, 641, 849, 963, 1656, 1730
TaaI	ACNGT	8 cut(s)	472, 665, 766, 980, 1326, 1348, 1381, 1492
TaiI	ACGT	4 cut(s)	17, 44, 1184, 1282
TaqI	TCGA	7 cut(s)	103, 345, 369, 489, 597, 1073, 1689
TasI	AATT	8 cut(s)	97, 156, 476, 491, 779, 801, 1084, 1439
TatI	WGTACW	2 cut(s)	77, 532
TauI	GCSGC	1 cut(s)	960
TfiI	GAWTC	6 cut(s)	48, 371, 677, 845, 936, 1475
Tru1I	TTAA	3 cut(s)	92, 578, 1430
Tru9I	TTAA	3 cut(s)	92, 578, 1430
TscAI	CASTG	5 cut(s)	475, 747, 769, 790, 1023
TseFI	GTSAC	2 cut(s)	111, 876
TseI	GCWGC	3 cut(s)	1012, 1054, 1532
Tsp45I	GTSAC	2 cut(s)	111, 876
TspDTI	ATGAA	1 cut(s)	1501
TspGWI	ACGGA	1 cut(s)	73
TspRI	CASTG	5 cut(s)	475, 747, 769, 790, 1023
Van91I	CCANNNNNTGG	3 cut(s)	692, 1645, 1731
VneI	GTGCAC	1 cut(s)	226
VpaK11BI	GGWCC	2 cut(s)	352, 1660
XagI	CCTNNNNNAGG	1 cut(s)	1199
XapI	RAATTY	4 cut(s)	476, 779, 1084, 1439
XceI	RCATGY	3 cut(s)	307, 436, 889
XspI	CTAG	2 cut(s)	545, 1536

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.