AT2G32140

RESISTANCE protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0018741
Physical Location & Seq
Reverse (-)
13655627 .. 13657369
1743 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G32140.1

Sequence Viewer

Length: 1062 bp
ATGGCAATAGCTTCTTCTTCTCCTTCTTCTTCTTCTAATGTATCAGTGATCCCAACGGGACCTCAAGTGTTCATCAGTTTTAGGGGAAAAGAGCTACGCAAAGGCTTCATCAGTTTTCTTGTGCCTGCCTTGAAGAAAAAAAACATCAACGTCTTTATAGATGAGCACGAGGTGAGGGGAAAAGACCTAATCAGCCTGTTTAGGAGGATAGGTGAGTCAAAAATCGCGTTGGTAATCTTCTCTGAGGGATACACCGAGTCAAAATGGTGTTTGGACGAGCTGGTACAGATCAAGAAATGCGTTGATCAAAAGAAAATCATAGCGATTCCCATCTTCTACAAGCTTGATCCCGCAGTGGTGAAGGGTCTTAAAGGAAAATTCGGCGATAAATTCAGGGATCTGATTGAGAGATATCATCATGAACCAGAAAGATACCAGAAATGGACGGAAGCTTTGACTTCTGTTTCCCGAACGTTTGCATTGTGCTTACCAGAACACAGTGATAAATCTGAGAAGGATTTCATAAGGTCAATCATCAAGGAAGTTAAGAAAGCCCTGTCAAATATCTCCAGAGAAAGAAATGGAGATAGAGAAGAAATTGACGACTGTTTCGTGGTTTCTGAAAGGAAACTCACTACCGATATGTACGATACACCAGAAGTTTCGACGTCGACGATGAGGAAGGTCTCCTCCAACAATGGAGTCGGAGTCGGTACGTTTAAGTCACAGAAACCAAATTTCGACGATGAAGATGACGACGGAGACTCCCTTTTAAAAGCGTTGGTTGCGAAGCTCGTCGCTAGTACAACTTCCATTGTAGCTGCTTACGCAGAGCTTCAGAGGGCGCATAGCGACGCTATACAAGCGGCGGAAACGGTGGTAGTTGATGTTAAAACTTTATCGGAGCTTATACGGAGTAGTAACGGAGGAGGTGGTGGAAGTGGCAGTGGAAGCGGTAGCTCCCTTGAGAATCAGCCGAGGAGATCAAAGGTGAGGAAGCAAGTGTGGGCTGAAGTTCTCGGCATCTCATCCGACTCCACCATCATATTAGAGTGTATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PP2 TIR

Protein Analysis

353

Amino Acids

39.03

Weight (kDa)

8.43

Isoelectric Point (pI)

38.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 22 - 193 2.8e-40 TIR domain
TIR_2 PF13676 23 - 117 3.3e-11 TIR domain
DUF641 PF04859 258 - 303 3.8e-06 Plant protein of unknown function (DUF641)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0018741)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19960 AT1G65390 AT1G65390 AT1G65390 AT2G32140 AT5G45070 AT5G45080 AT5G45090 AT5G45090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 671
AccI GTMKAC 1 cut(s) 671
AccII CGCG 1 cut(s) 227
AciI CCGC 4 cut(s) 351, 866, 869, 954
AclI AACGTT 1 cut(s) 473
AclWI GGATC 3 cut(s) 43, 341, 405
AcsI RAATTY 3 cut(s) 377, 389, 736
AcuI CTGAAG 2 cut(s) 821, 1032
AcyI GRCGYC 1 cut(s) 668
AdeI CACNNNGTG 1 cut(s) 172
AfaI GTAC 4 cut(s) 285, 647, 715, 805
AgsI TTSAA 1 cut(s) 133
Alw21I GWGCWC 1 cut(s) 168
Alw26I GTCTC 2 cut(s) 691, 756
AlwI GGATC 3 cut(s) 43, 341, 405
ApeKI GCWGC 1 cut(s) 821
ApoI RAATTY 3 cut(s) 377, 389, 736
ArsI GACNNNNNNTTYG 4 cut(s) 436, 468, 593, 625
Asp700I GAANNNNTTC 1 cut(s) 518
AspLEI GCGC 1 cut(s) 847
AspS9I GGNCC 1 cut(s) 59
AsuHPI GGTGA 4 cut(s) 184, 224, 370, 1003
AvaII GGWCC 1 cut(s) 59
BauI CACGAG 1 cut(s) 167
Bbv12I GWGCWC 1 cut(s) 168
BbvI GCAGC 1 cut(s) 808
BccI CCATC 2 cut(s) 338, 1049
BciVI GTATCC 1 cut(s) 242
BclI TGATCA 1 cut(s) 304
BcoDI GTCTC 2 cut(s) 691, 756
BfaI CTAG 1 cut(s) 801
BfuI GTATCC 1 cut(s) 242
BisI GCNGC 2 cut(s) 822, 867
BlsI GCNGC 2 cut(s) 823, 868
Bme18I GGWCC 1 cut(s) 59
BmgT120I GGNCC 1 cut(s) 59
BmiI GGNNCC 1 cut(s) 60
BmsI GCATC 1 cut(s) 1032
BpmI CTGGAG 1 cut(s) 553
BpuEI CTTGAG 2 cut(s) 48, 986
BsaBI GATNNNNATC 1 cut(s) 329
BsaHI GRCGYC 1 cut(s) 668
BsaI GGTCTC 1 cut(s) 691
BsaJI CCNNGG 1 cut(s) 977
BsaXI ACNNNNNCTCC 6 cut(s) 196, 226, 693, 723, 749, 779
Bse8I GATNNNNATC 1 cut(s) 329
BseDI CCNNGG 1 cut(s) 977
BseGI GGATG 1 cut(s) 1028
BseJI GATNNNNATC 1 cut(s) 329
BseMII CTCAG 2 cut(s) 234, 501
BseRI GAGGAG 3 cut(s) 679, 942, 994
BseXI GCAGC 1 cut(s) 808
Bsh1236I CGCG 1 cut(s) 227
BsiHKAI GWGCWC 1 cut(s) 168
BslFI GGGAC 1 cut(s) 72
BsmAI GTCTC 2 cut(s) 691, 756
BsmFI GGGAC 1 cut(s) 72
Bso31I GGTCTC 1 cut(s) 691
Bsp1286I GDGCHC 1 cut(s) 168
Bsp143I GATC 6 cut(s) 48, 288, 304, 346, 397, 983
BspACI CCGC 4 cut(s) 351, 866, 869, 954
BspCNI CTCAG 2 cut(s) 235, 502
BspFNI CGCG 1 cut(s) 227
BspHI TCATGA 1 cut(s) 418
BspLI GGNNCC 1 cut(s) 60
BspPI GGATC 3 cut(s) 43, 341, 405
BspTNI GGTCTC 1 cut(s) 691
BssECI CCNNGG 1 cut(s) 977
BssMI GATC 6 cut(s) 48, 288, 304, 346, 397, 983
BssNI GRCGYC 1 cut(s) 668
BssSI CACGAG 1 cut(s) 167
Bst2BI CACGAG 1 cut(s) 167
Bst4CI ACNGT 3 cut(s) 500, 608, 877
BstACI GRCGYC 1 cut(s) 668
BstC8I GCNNGC 1 cut(s) 126
BstDEI CTNAG 2 cut(s) 243, 510
BstF5I GGATG 1 cut(s) 1028
BstFNI CGCG 1 cut(s) 227
BstHHI GCGC 1 cut(s) 847
BstKTI GATC 6 cut(s) 51, 291, 307, 349, 400, 986
BstMAI GTCTC 2 cut(s) 691, 756
BstMBI GATC 6 cut(s) 48, 288, 304, 346, 397, 983
BstMWI GCNNNNNNNGC 4 cut(s) 785, 827, 863, 951
BstUI CGCG 1 cut(s) 227
BstV1I GCAGC 1 cut(s) 808
BstX2I RGATCY 1 cut(s) 397
BstYI RGATCY 1 cut(s) 397
BsuI GTATCC 1 cut(s) 242
BtsCI GGATG 1 cut(s) 1028
BtsI GCAGTG 2 cut(s) 360, 952
BtsIMutI CAGTG 4 cut(s) 51, 360, 505, 952
Cac8I GCNNGC 1 cut(s) 126
CciI TCATGA 1 cut(s) 418
CfoI GCGC 1 cut(s) 847
Cfr13I GGNCC 1 cut(s) 59
CseI GACGC 1 cut(s) 863
Csp6I GTAC 4 cut(s) 284, 646, 714, 804
CviAII CATG 1 cut(s) 419
CviQI GTAC 4 cut(s) 284, 646, 714, 804
DdeI CTNAG 2 cut(s) 243, 510
DpnI GATC 6 cut(s) 50, 290, 306, 348, 399, 985
DpnII GATC 6 cut(s) 48, 288, 304, 346, 397, 983
DraI TTTAAA 1 cut(s) 774
DraIII CACNNNGTG 1 cut(s) 172
EciI GGCGGA 1 cut(s) 884
Eco31I GGTCTC 1 cut(s) 691
Eco32I GATATC 1 cut(s) 413
Eco47I GGWCC 1 cut(s) 59
Eco57I CTGAAG 2 cut(s) 821, 1032
EcoO109I RGGNCCY 1 cut(s) 59
EcoRV GATATC 1 cut(s) 413
FaeI CATG 1 cut(s) 422
FaqI GGGAC 1 cut(s) 72
FatI CATG 1 cut(s) 418
FauI CCCGC 1 cut(s) 358
FbaI TGATCA 1 cut(s) 304
FblI GTMKAC 1 cut(s) 671
Fnu4HI GCNGC 2 cut(s) 822, 867
FokI GGATG 1 cut(s) 1015
Fsp4HI GCNGC 2 cut(s) 822, 867
FspBI CTAG 1 cut(s) 801
GlaI GCGC 1 cut(s) 846
GluI GCNGC 2 cut(s) 822, 867
GsuI CTGGAG 1 cut(s) 553
HgaI GACGC 1 cut(s) 863
HhaI GCGC 1 cut(s) 847
Hin1I GRCGYC 1 cut(s) 668
Hin1II CATG 1 cut(s) 422
Hin6I GCGC 1 cut(s) 845
HinP1I GCGC 1 cut(s) 845
HincII GTYRAC 1 cut(s) 672
HindII GTYRAC 1 cut(s) 672
HindIII AAGCTT 2 cut(s) 341, 450
HinfI GANTC 8 cut(s) 215, 257, 325, 702, 708, 764, 970, 1034
HphI GGTGA 4 cut(s) 184, 224, 370, 1003
Hpy166II GTNNAC 1 cut(s) 672
Hpy188I TCNGA 8 cut(s) 244, 402, 511, 622, 707, 840, 904, 1033
Hpy188III TCNNGA 4 cut(s) 292, 419, 468, 570
Hpy8I GTNNAC 1 cut(s) 672
Hpy99I CGWCG 7 cut(s) 670, 673, 676, 746, 761, 800, 857
HpyAV CCTTC 4 cut(s) 33, 355, 508, 676
HpyCH4III ACNGT 3 cut(s) 500, 608, 877
HpyCH4IV ACGT 4 cut(s) 150, 473, 668, 716
HpyCH4V TGCA 1 cut(s) 479
HpyF10VI GCNNNNNNNGC 4 cut(s) 785, 827, 863, 951
HpyF3I CTNAG 2 cut(s) 243, 510
HpySE526I ACGT 4 cut(s) 150, 473, 668, 716
Hsp92I GRCGYC 1 cut(s) 668
Hsp92II CATG 1 cut(s) 422
HspAI GCGC 1 cut(s) 845
Ksp22I TGATCA 1 cut(s) 304
Kzo9I GATC 6 cut(s) 48, 288, 304, 346, 397, 983
LmnI GCTCC 2 cut(s) 904, 965
Lsp1109I GCAGC 1 cut(s) 808
LweI GCATC 1 cut(s) 1032
MaeI CTAG 1 cut(s) 801
MaeII ACGT 4 cut(s) 150, 473, 668, 716
MaeIII GTNAC 2 cut(s) 723, 920
MalI GATC 6 cut(s) 50, 290, 306, 348, 399, 985
MboI GATC 6 cut(s) 48, 288, 304, 346, 397, 983
MflI RGATCY 1 cut(s) 397
MhlI GDGCHC 1 cut(s) 168
MluCI AATT 4 cut(s) 377, 389, 597, 736
MlyI GAGTC 6 cut(s) 224, 266, 711, 717, 758, 1028
MmeI TCCRAC 3 cut(s) 685, 717, 1056
MroXI GAANNNNTTC 1 cut(s) 518
MseI TTAA 5 cut(s) 369, 546, 720, 773, 891
MvnI CGCG 1 cut(s) 227
MwoI GCNNNNNNNGC 4 cut(s) 785, 827, 863, 951
NdeII GATC 6 cut(s) 48, 288, 304, 346, 397, 983
NlaIII CATG 1 cut(s) 422
NlaIV GGNNCC 1 cut(s) 60
NmeAIII GCCGAG 2 cut(s) 999, 1002
NmuCI GTSAC 1 cut(s) 723
PagI TCATGA 1 cut(s) 418
PcsI WCGNNNNNNNCGW 2 cut(s) 609, 671
PdmI GAANNNNTTC 1 cut(s) 518
PfeI GAWTC 2 cut(s) 325, 970
PkrI GCNGC 2 cut(s) 823, 868
PleI GAGTC 6 cut(s) 223, 265, 710, 716, 758, 1028
PpsI GAGTC 6 cut(s) 223, 265, 710, 716, 758, 1028
PpuMI RGGWCCY 1 cut(s) 59
Psp1406I AACGTT 1 cut(s) 473
Psp5II RGGWCCY 1 cut(s) 59
PspN4I GGNNCC 1 cut(s) 60
PspPI GGNCC 1 cut(s) 59
PspPPI RGGWCCY 1 cut(s) 59
PsuI RGATCY 1 cut(s) 397
RsaI GTAC 4 cut(s) 285, 647, 715, 805
RsaNI GTAC 4 cut(s) 284, 646, 714, 804
SalI GTCGAC 1 cut(s) 670
SaqAI TTAA 5 cut(s) 369, 546, 720, 773, 891
SatI GCNGC 2 cut(s) 822, 867
Sau3AI GATC 6 cut(s) 48, 288, 304, 346, 397, 983
Sau96I GGNCC 1 cut(s) 59
SchI GAGTC 6 cut(s) 224, 266, 711, 717, 758, 1028
SduI GDGCHC 1 cut(s) 168
SfaNI GCATC 1 cut(s) 1032
SgrDI CGTCGACG 1 cut(s) 670
SinI GGWCC 1 cut(s) 59
SmlI CTYRAG 2 cut(s) 63, 965
SmoI CTYRAG 2 cut(s) 63, 965
Sse9I AATT 4 cut(s) 377, 389, 597, 736
SsiI CCGC 4 cut(s) 351, 866, 869, 954
SspMI CTAG 1 cut(s) 801
TaaI ACNGT 3 cut(s) 500, 608, 877
TaiI ACGT 4 cut(s) 153, 476, 671, 719
TaqI TCGA 3 cut(s) 665, 671, 741
TasI AATT 4 cut(s) 377, 389, 597, 736
TatI WGTACW 1 cut(s) 803
TauI GCSGC 1 cut(s) 869
TfiI GAWTC 2 cut(s) 325, 970
Tru1I TTAA 5 cut(s) 369, 546, 720, 773, 891
Tru9I TTAA 5 cut(s) 369, 546, 720, 773, 891
TscAI CASTG 4 cut(s) 51, 360, 505, 952
TseFI GTSAC 1 cut(s) 723
TseI GCWGC 1 cut(s) 821
Tsp45I GTSAC 1 cut(s) 723
TspDTI ATGAA 5 cut(s) 61, 97, 435, 511, 762
TspGWI ACGGA 4 cut(s) 461, 774, 928, 939
TspRI CASTG 4 cut(s) 51, 360, 505, 952
VpaK11BI GGWCC 1 cut(s) 59
XapI RAATTY 3 cut(s) 377, 389, 736
XmiI GTMKAC 1 cut(s) 671
XmnI GAANNNNTTC 1 cut(s) 518
XspI CTAG 1 cut(s) 801
ZraI GACGTC 1 cut(s) 669
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.