AT2G34740

Serine/threonine phosphatases, family 2C, catalytic domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0019167
Physical Location & Seq
Forward (+)
14658410 .. 14660305
1896 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G34740.1

Sequence Viewer

Length: 1020 bp
ATGAAGAAGACCATCAAGAACTCAACTCATAGACCCGAGGATATACTTGTGCATGCAATCAAGAAGCGAAGATCAGCTAGTGGAGATGTCAAGAATGCAGTGAAACTCAAGGAAGGAGAGGATTACTTACGTGTAGAAGAAGAAATACCTCATGATGATAATGTTGTTGTTATTGATGATGGTTGTGATCATGATCATGATGTTGATGATAATGATGACGATGAGGAGGAAAATGGAAGATATTGTAGACGTGAATTTGATCATGGATACCATCTAGTGAAAGGCCAAATGGGTCATGGCATGGAAGACTTCATCGTGGCTGACACCAAAACCGTTAAAGGCCACAATCTTGGGTTATACGCTATATTCGACGGCCACTCAGGCAGTGATGTTGCGGATTATCTGCAGAACCATCTCTTTGATAACATCTTGAGTCAGCCGGATTTTTGGAGAAACCCTAAGAAGGCAATCAAAAGAGCGTATAAATCTACGGACGACTACATTCTTCAAAACGTGGTTGGTCCACGAGGTGGCTCCACGGCTGTGACGGCTATAGTAATTGATGGGAAGAAAATTGTGGTTGCAAACGTTGGAGATTCAAGAGCAATCTTGTGTCGTGAAAGTGATGTAGTCAAACAAATTACGGTTGATCACGAACCTGACAAAGAGAGAGATCTTGTCAAGAGCAAAGGCGGCTTTGTCTCCCAAAAGCCAGGCAATGTTCCGAGAGTGGATGGACAACTAGCGATGACGCGTGCGTTTGGAGACGGAGGCCTTAAAGAGCATATAAGTGTGATCCCGAACATAGAGATTGCCGAGATCCACGATGACACAAAGTTCTTGATCTTGGCTAGCGATGGACTCTGGAAGGTGATGTCGAACGACGAGGTTTGGGATCAAATCAAAAAGAGAGGGAATGCAGAAGAAGCTGCGAAAATGCTAATTGATAAAGCCTTGGCTAGAGGAAGTAAAGATGATATCTCTTGTGTTGTTGTTTCTTTCCTTCAATGGATCGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PP2C RVT_3

Protein Analysis

339

Amino Acids

37.88

Weight (kDa)

5.4

Isoelectric Point (pI)

38.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PP2C PF00481 100 - 327 1.3e-54 Protein phosphatase 2C
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0019167)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34740 AT2G34740 AT2G34740
fragaria_vesca FvH4_3g10800
malus_domestica MD10G1247400.v1.1
prunus_persica Prupe.4G095900_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0261331
rosa_wichuraiana Rw5G011290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 530
AccI GTMKAC 1 cut(s) 247
AccII CGCG 1 cut(s) 754
AciI CCGC 2 cut(s) 395, 693
AclI AACGTT 1 cut(s) 588
AclWI GGATC 4 cut(s) 790, 814, 903, 1019
AcoI YGGCCR 1 cut(s) 373
AcsI RAATTY 1 cut(s) 254
AdeI CACNNNGTG 1 cut(s) 530
AfiI CCNNNNNNNGG 2 cut(s) 463, 530
AflIII ACRYGT 2 cut(s) 130, 752
AgsI TTSAA 3 cut(s) 509, 600, 1007
AjiI CACGTC 1 cut(s) 251
AjnI CCWGG 1 cut(s) 712
AleI CACNNNNGTG 1 cut(s) 542
AluBI AGCT 2 cut(s) 77, 929
AluI AGCT 2 cut(s) 77, 929
Alw26I GTCTC 2 cut(s) 706, 759
AlwI GGATC 4 cut(s) 790, 814, 903, 1019
Ama87I CYCGRG 1 cut(s) 35
AoxI GGCC 4 cut(s) 283, 340, 373, 772
ApeKI GCWGC 1 cut(s) 929
ApoI RAATTY 1 cut(s) 254
AspS9I GGNCC 1 cut(s) 521
AsuHPI GGTGA 1 cut(s) 883
AsuNHI GCTAGC 1 cut(s) 851
AvaI CYCGRG 1 cut(s) 35
AvaII GGWCC 1 cut(s) 521
BarI GAAGNNNNNNTAC 2 cut(s) 129, 161
BauI CACGAG 1 cut(s) 525
BbsI GAAGAC 2 cut(s) 14, 312
BbvI GCAGC 1 cut(s) 916
BccI CCATC 7 cut(s) 20, 173, 279, 420, 557, 728, 851
BceAI ACGGC 3 cut(s) 388, 555, 564
BciT130I CCWGG 1 cut(s) 714
BciVI GTATCC 1 cut(s) 260
BclI TGATCA 4 cut(s) 187, 193, 259, 649
BcoDI GTCTC 2 cut(s) 706, 759
BfaI CTAG 5 cut(s) 78, 275, 743, 852, 960
BfmI CTRYAG 2 cut(s) 404, 552
BfuI GTATCC 1 cut(s) 260
BglI GCCNNNNNGGC 1 cut(s) 381
BglII AGATCT 1 cut(s) 673
BisI GCNGC 2 cut(s) 694, 930
BlsI GCNGC 2 cut(s) 695, 931
Bme1390I CCNGG 1 cut(s) 714
Bme18I GGWCC 1 cut(s) 521
BmeT110I CYCGRG 1 cut(s) 35
BmgBI CACGTC 1 cut(s) 251
BmgT120I GGNCC 1 cut(s) 521
BmiI GGNNCC 1 cut(s) 535
BmrFI CCNGG 1 cut(s) 714
BmtI GCTAGC 1 cut(s) 855
BpiI GAAGAC 2 cut(s) 14, 312
BpuEI CTTGAG 2 cut(s) 92, 451
Bsa29I ATCGAT 1 cut(s) 1014
BsaAI YACGTR 1 cut(s) 131
BsaBI GATNNNNATC 1 cut(s) 192
BsaJI CCNNGG 3 cut(s) 36, 537, 954
Bsc4I CCNNNNNNNGG 2 cut(s) 463, 530
Bse3DI GCAATG 1 cut(s) 724
Bse8I GATNNNNATC 1 cut(s) 192
BseBI CCWGG 1 cut(s) 714
BseCI ATCGAT 1 cut(s) 1014
BseDI CCNNGG 3 cut(s) 36, 537, 954
BseGI GGATG 1 cut(s) 739
BseJI GATNNNNATC 1 cut(s) 192
BseLI CCNNNNNNNGG 2 cut(s) 463, 530
BseMI GCAATG 1 cut(s) 724
BseMII CTCAG 1 cut(s) 393
BseRI GAGGAG 1 cut(s) 239
BseXI GCAGC 1 cut(s) 916
Bsh1236I CGCG 1 cut(s) 754
BshFI GGCC 4 cut(s) 285, 342, 375, 774
BshVI ATCGAT 1 cut(s) 1014
BsiHKCI CYCGRG 1 cut(s) 35
BsiSI CCGG 1 cut(s) 440
BslI CCNNNNNNNGG 2 cut(s) 463, 530
BsmAI GTCTC 2 cut(s) 706, 759
BsmBI CGTCTC 1 cut(s) 759
BsmI GAATGC 2 cut(s) 100, 922
BsnI GGCC 4 cut(s) 285, 342, 375, 774
BsoBI CYCGRG 1 cut(s) 35
BspACI CCGC 2 cut(s) 395, 693
BspANI GGCC 4 cut(s) 285, 342, 375, 774
BspCNI CTCAG 1 cut(s) 392
BspDI ATCGAT 1 cut(s) 1014
BspFNI CGCG 1 cut(s) 754
BspHI TCATGA 3 cut(s) 151, 190, 196
BspLI GGNNCC 1 cut(s) 535
BspMAI CTGCAG 1 cut(s) 408
BspOI GCTAGC 1 cut(s) 855
BspPI GGATC 4 cut(s) 790, 814, 903, 1019
BsrDI GCAATG 1 cut(s) 724
BssECI CCNNGG 3 cut(s) 36, 537, 954
BssSI CACGAG 1 cut(s) 525
BssT1I CCWWGG 1 cut(s) 954
Bst2BI CACGAG 1 cut(s) 525
Bst2UI CCWGG 1 cut(s) 714
Bst4CI ACNGT 2 cut(s) 334, 646
BstBAI YACGTR 1 cut(s) 131
BstC8I GCNNGC 3 cut(s) 54, 756, 853
BstDEI CTNAG 2 cut(s) 379, 459
BstDSI CCRYGG 1 cut(s) 537
BstF5I GGATG 1 cut(s) 739
BstFNI CGCG 1 cut(s) 754
BstMAI GTCTC 2 cut(s) 706, 759
BstMWI GCNNNNNNNGC 4 cut(s) 381, 548, 693, 926
BstNI CCWGG 1 cut(s) 714
BstNSI RCATGY 1 cut(s) 56
BstSCI CCNGG 1 cut(s) 712
BstSFI CTRYAG 2 cut(s) 404, 552
BstUI CGCG 1 cut(s) 754
BstV1I GCAGC 1 cut(s) 916
BstV2I GAAGAC 2 cut(s) 14, 312
BstX2I RGATCY 2 cut(s) 673, 819
BstXI CCANNNNNNTGG 1 cut(s) 350
BstYI RGATCY 2 cut(s) 673, 819
Bsu15I ATCGAT 1 cut(s) 1014
BsuI GTATCC 1 cut(s) 260
BsuRI GGCC 4 cut(s) 285, 342, 375, 774
BsuTUI ATCGAT 1 cut(s) 1014
BtgI CCRYGG 1 cut(s) 537
BtgZI GCGATG 2 cut(s) 761, 870
BtrI CACGTC 1 cut(s) 251
BtsCI GGATG 1 cut(s) 739
BtsI GCAGTG 2 cut(s) 105, 391
BtsIMutI CAGTG 2 cut(s) 105, 391
Cac8I GCNNGC 3 cut(s) 54, 756, 853
CciI TCATGA 3 cut(s) 151, 190, 196
Cfr13I GGNCC 1 cut(s) 521
ClaI ATCGAT 1 cut(s) 1014
CseI GACGC 1 cut(s) 760
CviAII CATG 7 cut(s) 53, 152, 191, 197, 263, 296, 301
DdeI CTNAG 2 cut(s) 379, 459
DraIII CACNNNGTG 1 cut(s) 530
EaeI YGGCCR 1 cut(s) 373
Eco130I CCWWGG 1 cut(s) 954
Eco147I AGGCCT 1 cut(s) 774
Eco32I GATATC 1 cut(s) 979
Eco47I GGWCC 1 cut(s) 521
Eco88I CYCGRG 1 cut(s) 35
EcoRII CCWGG 1 cut(s) 712
EcoRV GATATC 1 cut(s) 979
EcoT14I CCWWGG 1 cut(s) 954
ErhI CCWWGG 1 cut(s) 954
Esp3I CGTCTC 1 cut(s) 759
FaeI CATG 7 cut(s) 56, 155, 194, 200, 266, 299, 304
FatI CATG 7 cut(s) 52, 151, 190, 196, 262, 295, 300
FbaI TGATCA 4 cut(s) 187, 193, 259, 649
FblI GTMKAC 1 cut(s) 247
Fnu4HI GCNGC 2 cut(s) 694, 930
FokI GGATG 1 cut(s) 746
Fsp4HI GCNGC 2 cut(s) 694, 930
FspBI CTAG 5 cut(s) 78, 275, 743, 852, 960
GluI GCNGC 2 cut(s) 694, 930
HaeIII GGCC 4 cut(s) 285, 342, 375, 774
HapII CCGG 1 cut(s) 440
HgaI GACGC 1 cut(s) 760
Hin1II CATG 7 cut(s) 56, 155, 194, 200, 266, 299, 304
HinfI GANTC 3 cut(s) 433, 596, 861
HpaII CCGG 1 cut(s) 440
HphI GGTGA 1 cut(s) 883
Hpy166II GTNNAC 2 cut(s) 248, 524
Hpy188I TCNGA 1 cut(s) 726
Hpy8I GTNNAC 2 cut(s) 248, 524
Hpy99I CGWCG 2 cut(s) 374, 887
HpyAV CCTTC 4 cut(s) 107, 457, 862, 1013
HpyCH4III ACNGT 2 cut(s) 334, 646
HpyCH4IV ACGT 4 cut(s) 130, 250, 513, 588
HpyCH4V TGCA 6 cut(s) 52, 56, 98, 406, 584, 920
HpyF10VI GCNNNNNNNGC 4 cut(s) 381, 548, 693, 926
HpyF3I CTNAG 2 cut(s) 379, 459
HpySE526I ACGT 4 cut(s) 130, 250, 513, 588
Hsp92II CATG 7 cut(s) 56, 155, 194, 200, 266, 299, 304
Ksp22I TGATCA 4 cut(s) 187, 193, 259, 649
LmnI GCTCC 1 cut(s) 539
LpnPI CCDG 6 cut(s) 366, 453, 672, 699, 726, 850
Lsp1109I GCAGC 1 cut(s) 916
MaeI CTAG 5 cut(s) 78, 275, 743, 852, 960
MaeII ACGT 4 cut(s) 130, 250, 513, 588
MaeIII GTNAC 1 cut(s) 544
MflI RGATCY 2 cut(s) 673, 819
MluCI AATT 5 cut(s) 254, 558, 573, 639, 942
MluI ACGCGT 1 cut(s) 752
MlyI GAGTC 2 cut(s) 442, 855
MmeI TCCRAC 1 cut(s) 571
MseI TTAA 3 cut(s) 336, 777, 1018
MslI CAYNNNNRTG 3 cut(s) 195, 542, 789
MspI CCGG 1 cut(s) 440
MspR9I CCNGG 1 cut(s) 714
Mva1269I GAATGC 2 cut(s) 100, 922
MvaI CCWGG 1 cut(s) 714
MvnI CGCG 1 cut(s) 754
MwoI GCNNNNNNNGC 4 cut(s) 381, 548, 693, 926
NheI GCTAGC 1 cut(s) 851
NlaIII CATG 7 cut(s) 56, 155, 194, 200, 266, 299, 304
NlaIV GGNNCC 1 cut(s) 535
NmeAIII GCCGAG 1 cut(s) 841
NmuCI GTSAC 1 cut(s) 544
NspI RCATGY 1 cut(s) 56
OliI CACNNNNGTG 1 cut(s) 542
PaeI GCATGC 1 cut(s) 56
PagI TCATGA 3 cut(s) 151, 190, 196
PceI AGGCCT 1 cut(s) 774
PcsI WCGNNNNNNNCGW 1 cut(s) 366
PctI GAATGC 2 cut(s) 100, 922
PfeI GAWTC 1 cut(s) 596
PflMI CCANNNNNTGG 1 cut(s) 530
PkrI GCNGC 2 cut(s) 695, 931
PleI GAGTC 2 cut(s) 441, 855
PpsI GAGTC 2 cut(s) 441, 855
Ppu21I YACGTR 1 cut(s) 131
Psp1406I AACGTT 1 cut(s) 588
Psp6I CCWGG 1 cut(s) 712
PspGI CCWGG 1 cut(s) 712
PspN4I GGNNCC 1 cut(s) 535
PspPI GGNCC 1 cut(s) 521
PstI CTGCAG 1 cut(s) 408
PsuI RGATCY 2 cut(s) 673, 819
RseI CAYNNNNRTG 3 cut(s) 195, 542, 789
SaqAI TTAA 3 cut(s) 336, 777, 1018
SatI GCNGC 2 cut(s) 694, 930
Sau96I GGNCC 1 cut(s) 521
SchI GAGTC 2 cut(s) 442, 855
ScrFI CCNGG 1 cut(s) 714
SfcI CTRYAG 2 cut(s) 404, 552
SinI GGWCC 1 cut(s) 521
SmiMI CAYNNNNRTG 3 cut(s) 195, 542, 789
SmlI CTYRAG 2 cut(s) 107, 430
SmoI CTYRAG 2 cut(s) 107, 430
SphI GCATGC 1 cut(s) 56
Sse9I AATT 5 cut(s) 254, 558, 573, 639, 942
SseBI AGGCCT 1 cut(s) 774
SsiI CCGC 2 cut(s) 395, 693
SspMI CTAG 5 cut(s) 78, 275, 743, 852, 960
StuI AGGCCT 1 cut(s) 774
StyD4I CCNGG 1 cut(s) 712
StyI CCWWGG 1 cut(s) 954
TaaI ACNGT 2 cut(s) 334, 646
TaiI ACGT 4 cut(s) 133, 253, 516, 591
TaqI TCGA 3 cut(s) 369, 878, 1014
TasI AATT 5 cut(s) 254, 558, 573, 639, 942
TauI GCSGC 1 cut(s) 696
TfiI GAWTC 1 cut(s) 596
Tru1I TTAA 3 cut(s) 336, 777, 1018
Tru9I TTAA 3 cut(s) 336, 777, 1018
TscAI CASTG 2 cut(s) 105, 391
TseFI GTSAC 1 cut(s) 544
TseI GCWGC 1 cut(s) 929
Tsp45I GTSAC 1 cut(s) 544
TspDTI ATGAA 2 cut(s) 17, 301
TspGWI ACGGA 2 cut(s) 506, 783
TspRI CASTG 2 cut(s) 105, 391
Van91I CCANNNNNTGG 1 cut(s) 530
VpaK11BI GGWCC 1 cut(s) 521
XapI RAATTY 1 cut(s) 254
XceI RCATGY 1 cut(s) 56
XcmI CCANNNNNNNNNTGG 1 cut(s) 293
XmiI GTMKAC 1 cut(s) 247
XspI CTAG 5 cut(s) 78, 275, 743, 852, 960
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.