AT2G40930

Belongs to the peptidase C19 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0010113
Physical Location & Seq
Reverse (-)
17076311 .. 17082528
6218 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G40930.2

Sequence Viewer

Length: 2775 bp
ATGGCGGAGGTATCGATGGGAAGCAGCAGTAGCAGCACGGATCTGTCTCCCGAGGAAGAGCGAGTTTTCATCAGAGACATTGCTATTGCTGCTGAGGCTAATAGTAAAGAAGGCGATACATTTTATCTCATCACTCAGAGATGGTGGCAAGAATGGATTGAGTATGTGAATCAAGACCAACCATGTAACACAAATGATGGGTCTTCACTGTCAGAGCATTGCGACTCTCCTGGTTCAAGCACTCTAAAGAAGCCTTCTAGGATTGATAACTCTGATTTGATCTATGATTCTTCGCTGGAGGACCCGAGTAATACCAGTGAGATTATTGAAACACTTCAGGAAGGTCGTGATTATGTTTTGCTCCCTCAAGAAGTGTGGAACCAATTGCGTTCATGGTACGGGGGTGGTCCAACTCTGGCACGGAGAGTCATTAGCTCAGGTCTCTCTCAAACAGAATTGGCTGTAGAGGTTTACCCTTTACGTCTTCAGCTACTTCTGATGCCAAAAAGTGACCATAGTGCCATAAGAATTAGCAAAAAGGAAACTATCAGAGAGCTCCATCGAAGAGCCTGTGAAATTTTTGACCTCGACTCAGAGCATGTACGCATTTGGGATTACTACGGCCACCAAAAGTATTCTTTGATGAATGACTTAGATAAGACACTGGACGATGCTAACCTACAAATGGATCAGGATATTTTGGTGGAGGTGCTTGACATCAATGGTACATTATCAAGTGCTCACATTCAATCTGCTCAAGAGAACGGATTGGTGGATGGAGACTCTACTTCTATTCTCATTGAGCCTTCTAAATCGAGCTTGGCTGCCGCAGGAGGGTTCTCTTCAAGCAGGAATGCATTCAGAACTGGTAGTGTAGAAGTTTCACAATCTTTTGATAACACATACAGTAGCACTGGCGTCACCACTAGGGGATCCACAGCTGGCTTGACAGGGCTGCTAAATCTTGGGAATACTTGTTTCATGAATAGTGCGATTCAGTGTCTGGTTCATACACCTGAGTTTGCTAGTTACTTTCAAGAAGATTATCATCAAGAAATAAATTGGCAAAACCCTCTTGGAATGGTGGGGGAATTAGCTCTCGCATTTGGTGACTTGCTCAGGAAGTTATGGGCTCCTGGGCGGACACCAATTGCACCTCGTCCATTCAAAGCTAAACTTGCTCGCTTTGCTCCTCAATTTAGTGGGTACAATCAACATGATTCGCAGGAGCTTTTAGCGTTTCTGCTGGATGGTCTTCACGAGGACCTAAATCGTGTTAAACACAAACCATATATAAATTCTCGAGACGCAGATGGGCGCCCTGATGAAGAAGTTGCTGATGAGTTCTGGAAAAATCATATTGCTCGTAATGACTCAATAATAGTTGATGTTTGTCAGGGCCAATATAAGTCAACATTGGTGTGTCCAATCTGCAACAAGGTTTCTGTAACGTTTGATCCCTTCATGTACCTGTCTTTGCCGCTGCAGTTCAACACAACACGAGCAATAACAGTCACAGTTTTTTCTTGTGATAAAACTGCCTTACCTTCCACTATCACAGTCAATGTTTCAAAGCAGGGACGTTGCAGAGACTTGATCCAGGCATTAACAAATGCTTGTTCCTTGAAGCAAAGTGAAGAGCTGAAACTTGCAGAGATTCGGAATAATTTTATCCATAGATTATTTGAAGACCCTTTAATTCCGTTGTCAAGTATCAAAGATGATGACCACCTTGCTGCATACAAACTTTCAAAGTCTTCGGAGAATACGACTTTGCTTAGACTAGTACTCCGCCGCAGAGATCAGAAAGCTGGGGAACGTGAAAGTACAGTACAATTGAAACCCTGTGGAACACCTCTTCTCTCATCAGCTTCATGCGGAGATGCACTCACCAAAGGAAAAATCCATTGCCTCGTCCAGAATATGCTTTCACCTTTTCGGAGGGAAGAATCTGTGGGCAAAAAAGGAAATTCTGATTCTAGCATCCCCGAGAGAAGGTCAGCTCGATTTAATAATACTGAGGAAGAAGATAAAGTTGGTGGACTGAAAAAAGCCAAGAAAAGCAACTCCTCCGACTTGGGTGCTTCTAAATTATCCCTGCAACTCATTGATGAAGACAACAAAACGATTAATCTGCCAGACAATGAAGCAGAAGCTATGAAATTACCGTCATCAGCTACTGTAACTATATATTTGGATTGGACACCAGAACTCTCTGGTATGTATGATATAACTTGCCTGGAGAGTTTGCCTGAAGTACTCAAATACGGACCTACTACCAAGAAGGCTCGTTCAGAACCTCTTTCTTTATATGCATGTTTGGAAGCGTTTCTACGCGAAGAGCCTTTGGTACCTGACGAAATGTGGTTCTGTCCACAATGCAATGAAAGAAGGCAGGCAAGCAAAAAGCTTGATCTGTGGAGGCTTCCTGAGGTCTTAGTCATACATCTAAAGAGATTCTCATACAGCAGGTCCATGAAGCATAAGTTGGAAACATTTGTTAACTTTCCCATTCATGACTTAGATCTAACAAAGTATGTAGCCAACAAAAACCTATCTCAACCTCAACTATATGAGCTCTATGCCTTGACCAACCATTATGGTGGTATGGGCAGCGGACACTACACTGCACATATCAAGCTTTTGGACGACAGTAGGTGGTATAACTTCGATGATAGCCATATATCACACATAAACGAAGATGATGTGAAGTCAGGTGCTGCATATGTGCTCTTCTACAGGAGGAAGTCTGATGCAGGCGGAAAAATGACATAA

Protein Analysis

924

Amino Acids

103.87

Weight (kDa)

5.52

Isoelectric Point (pI)

55.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUSP PF06337 38 - 144 6.4e-22 DUSP domain
Ubiquitin_UBP8 PF25242 163 - 216 1.9e-11 UBP8-like, ubiquitin-like domain
UCH PF00443 317 - 913 7.5e-78 Ubiquitin carboxyl-terminal hydrolase
UCH_1 PF13423 765 - 895 1e-05 Ubiquitin carboxyl-terminal hydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2460
Acc65I GGTACC 1 cut(s) 2350
AccB1I GGYRCC 2 cut(s) 1317, 2350
AccII CGCG 1 cut(s) 2337
AciI CCGC 9 cut(s) 5, 828, 1141, 1481, 1792, 1795, 1878, 2616, 2760
AclI AACGTT 1 cut(s) 1451
AclWI GGATC 6 cut(s) 48, 696, 927, 940, 1451, 1591
AcoI YGGCCR 1 cut(s) 622
AcsI RAATTY 3 cut(s) 576, 1297, 1969
AcuI CTGAAG 3 cut(s) 320, 470, 2274
AcyI GRCGYC 2 cut(s) 918, 1318
AfiI CCNNNNNNNGG 3 cut(s) 685, 834, 1995
AhlI ACTAGT 1 cut(s) 1783
AjnI CCWGG 4 cut(s) 229, 1135, 1599, 2238
AjuI GAANNNNNNNTTGG 4 cut(s) 2019, 2051, 2471, 2503
Alw21I GWGCWC 4 cut(s) 558, 742, 2580, 2733
Alw26I GTCTC 6 cut(s) 51, 69, 446, 774, 1299, 1584
AlwI GGATC 6 cut(s) 48, 696, 927, 940, 1451, 1591
AlwNI CAGNNNCTG 3 cut(s) 1003, 2180, 2720
Ama87I CYCGRG 4 cut(s) 50, 304, 1302, 1988
AoxI GGCC 2 cut(s) 622, 1399
ApeKI GCWGC 9 cut(s) 24, 33, 89, 824, 955, 1483, 1736, 2613, 2720
ApoI RAATTY 3 cut(s) 576, 1297, 1969
ArsI GACNNNNNNTTYG 2 cut(s) 185, 217
AseI ATTAAT 1 cut(s) 2130
Asp700I GAANNNNTTC 3 cut(s) 333, 857, 2328
Asp718I GGTACC 1 cut(s) 2350
AspLEI GCGC 1 cut(s) 1320
AspS9I GGNCC 6 cut(s) 301, 407, 1264, 1399, 2270, 2472
AsuHPI GGTGA 4 cut(s) 913, 1121, 1882, 1923
AvaI CYCGRG 4 cut(s) 50, 304, 1302, 1988
AvaII GGWCC 5 cut(s) 301, 407, 1264, 2270, 2472
AxyI CCTNAGG 1 cut(s) 2430
BaeI ACNNNNGTAYC 2 cut(s) 388, 421
BamHI GGATCC 1 cut(s) 932
BanI GGYRCC 2 cut(s) 1317, 2350
BanII GRGCYC 3 cut(s) 558, 1135, 2580
BarI GAAGNNNNNNTAC 2 cut(s) 2316, 2348
BauI CACGAG 2 cut(s) 1259, 1500
BbsI GAAGAC 6 cut(s) 195, 476, 1247, 1695, 1749, 2121
Bbv12I GWGCWC 4 cut(s) 558, 742, 2580, 2733
BbvCI CCTCAGC 1 cut(s) 93
BbvI GCAGC 9 cut(s) 36, 45, 76, 811, 942, 1470, 1723, 2625, 2707
BccI CCATC 7 cut(s) 10, 135, 191, 567, 770, 1244, 1307
BceAI ACGGC 1 cut(s) 637
BcgI CGANNNNNNTGC 4 cut(s) 2063, 2097, 2116, 2150
BciT130I CCWGG 4 cut(s) 231, 1137, 1601, 2240
BcoDI GTCTC 6 cut(s) 51, 69, 446, 774, 1299, 1584
BcuI ACTAGT 1 cut(s) 1783
BfaI CTAG 5 cut(s) 258, 927, 1026, 1784, 1980
BfmI CTRYAG 3 cut(s) 462, 1484, 2737
BfoI RGCGCY 1 cut(s) 1321
BfuAI ACCTGC 1 cut(s) 2460
BglII AGATCT 1 cut(s) 2524
BmcAI AGTACT 2 cut(s) 1788, 2259
Bme1390I CCNGG 4 cut(s) 231, 1137, 1601, 2240
Bme18I GGWCC 5 cut(s) 301, 407, 1264, 2270, 2472
BmeT110I CYCGRG 4 cut(s) 50, 304, 1302, 1988
BmgT120I GGNCC 6 cut(s) 301, 407, 1264, 1399, 2270, 2472
BmiI GGNNCC 6 cut(s) 303, 380, 934, 1134, 1319, 2352
BmrFI CCNGG 4 cut(s) 231, 1137, 1601, 2240
BmsI GCATC 5 cut(s) 489, 661, 1873, 1992, 2743
BpiI GAAGAC 6 cut(s) 195, 476, 1247, 1695, 1749, 2121
BplI GAGNNNNNCTC 2 cut(s) 1872, 1904
BpmI CTGGAG 2 cut(s) 317, 2261
Bpu10I CCTNAGC 3 cut(s) 93, 436, 1118
BpuEI CTTGAG 2 cut(s) 351, 741
Bsa29I ATCGAT 1 cut(s) 14
BsaBI GATNNNNATC 1 cut(s) 1047
BsaHI GRCGYC 2 cut(s) 918, 1318
BsaI GGTCTC 1 cut(s) 446
BsaJI CCNNGG 2 cut(s) 51, 1136
BsaXI ACNNNNNCTCC 2 cut(s) 1773, 1803
Bsc4I CCNNNNNNNGG 3 cut(s) 685, 834, 1995
Bse1I ACTGG 4 cut(s) 315, 669, 871, 919
Bse21I CCTNAGG 1 cut(s) 2430
Bse3DI GCAATG 4 cut(s) 78, 217, 1906, 2389
Bse8I GATNNNNATC 1 cut(s) 1047
BseBI CCWGG 4 cut(s) 231, 1137, 1601, 2240
BseCI ATCGAT 1 cut(s) 14
BseDI CCNNGG 2 cut(s) 51, 1136
BseGI GGATG 3 cut(s) 781, 1255, 1983
BseJI GATNNNNATC 1 cut(s) 1047
BseLI CCNNNNNNNGG 3 cut(s) 685, 834, 1995
BseMI GCAATG 4 cut(s) 78, 217, 1906, 2389
BseMII CTCAG 8 cut(s) 84, 149, 450, 606, 1008, 1132, 2010, 2421
BseNI ACTGG 4 cut(s) 315, 669, 871, 919
BseRI GAGGAG 2 cut(s) 1182, 2059
BseXI GCAGC 9 cut(s) 36, 45, 76, 811, 942, 1470, 1723, 2625, 2707
BseYI CCCAGC 1 cut(s) 1811
BsgI GTGCAG 1 cut(s) 2613
Bsh1236I CGCG 1 cut(s) 2337
BshFI GGCC 2 cut(s) 624, 1401
BshNI GGYRCC 2 cut(s) 1317, 2350
BshVI ATCGAT 1 cut(s) 14
BsiHKAI GWGCWC 4 cut(s) 558, 742, 2580, 2733
BsiHKCI CYCGRG 4 cut(s) 50, 304, 1302, 1988
BslFI GGGAC 1 cut(s) 1593
BslI CCNNNNNNNGG 3 cut(s) 685, 834, 1995
BsmAI GTCTC 6 cut(s) 51, 69, 446, 774, 1299, 1584
BsmBI CGTCTC 1 cut(s) 1299
BsmFI GGGAC 1 cut(s) 1593
BsmI GAATGC 2 cut(s) 857, 859
BsnI GGCC 2 cut(s) 624, 1401
Bso31I GGTCTC 1 cut(s) 446
BsoBI CYCGRG 4 cut(s) 50, 304, 1302, 1988
Bsp1286I GDGCHC 5 cut(s) 558, 742, 1135, 2580, 2733
Bsp143I GATC 9 cut(s) 40, 279, 688, 932, 1456, 1596, 1801, 2413, 2524
BspACI CCGC 9 cut(s) 5, 828, 1141, 1481, 1792, 1795, 1878, 2616, 2760
BspANI GGCC 2 cut(s) 624, 1401
BspCNI CTCAG 8 cut(s) 85, 148, 449, 605, 1009, 1131, 2011, 2422
BspDI ATCGAT 1 cut(s) 14
BspFNI CGCG 1 cut(s) 2337
BspHI TCATGA 2 cut(s) 981, 2515
BspLI GGNNCC 6 cut(s) 303, 380, 934, 1134, 1319, 2352
BspMAI CTGCAG 1 cut(s) 1488
BspMI ACCTGC 1 cut(s) 2460
BspPI GGATC 6 cut(s) 48, 696, 927, 940, 1451, 1591
BspQI GCTCTTC 5 cut(s) 51, 559, 1632, 2334, 2738
BspT107I GGYRCC 2 cut(s) 1317, 2350
BspTNI GGTCTC 1 cut(s) 446
BsrDI GCAATG 4 cut(s) 78, 217, 1906, 2389
BsrI ACTGG 4 cut(s) 315, 669, 871, 919
BssECI CCNNGG 2 cut(s) 51, 1136
BssMI GATC 9 cut(s) 40, 279, 688, 932, 1456, 1596, 1801, 2413, 2524
BssNI GRCGYC 2 cut(s) 918, 1318
BssSI CACGAG 2 cut(s) 1259, 1500
Bst2BI CACGAG 2 cut(s) 1259, 1500
Bst2UI CCWGG 4 cut(s) 231, 1137, 1601, 2240
Bst4CI ACNGT 9 cut(s) 210, 908, 1513, 1519, 1561, 1831, 2169, 2182, 2654
Bst6I CTCTTC 7 cut(s) 51, 559, 847, 1632, 1863, 2334, 2738
BstACI GRCGYC 2 cut(s) 918, 1318
BstC8I GCNNGC 5 cut(s) 943, 1183, 2397, 2401, 2758
BstF5I GGATG 3 cut(s) 781, 1255, 1983
BstFNI CGCG 1 cut(s) 2337
BstH2I RGCGCY 1 cut(s) 1321
BstHHI GCGC 1 cut(s) 1320
BstKTI GATC 9 cut(s) 43, 282, 691, 935, 1459, 1599, 1804, 2416, 2527
BstMAI GTCTC 6 cut(s) 51, 69, 446, 774, 1299, 1584
BstMBI GATC 9 cut(s) 40, 279, 688, 932, 1456, 1596, 1801, 2413, 2524
BstMWI GCNNNNNNNGC 6 cut(s) 30, 33, 89, 95, 1178, 1187
BstNI CCWGG 4 cut(s) 231, 1137, 1601, 2240
BstNSI RCATGY 2 cut(s) 602, 2319
BstSCI CCNGG 4 cut(s) 229, 1135, 1599, 2238
BstSFI CTRYAG 3 cut(s) 462, 1484, 2737
BstUI CGCG 1 cut(s) 2337
BstV1I GCAGC 9 cut(s) 36, 45, 76, 811, 942, 1470, 1723, 2625, 2707
BstV2I GAAGAC 6 cut(s) 195, 476, 1247, 1695, 1749, 2121
BstX2I RGATCY 3 cut(s) 40, 932, 2524
BstXI CCANNNNNNTGG 1 cut(s) 2603
BstYI RGATCY 3 cut(s) 40, 932, 2524
Bsu15I ATCGAT 1 cut(s) 14
Bsu36I CCTNAGG 1 cut(s) 2430
BsuRI GGCC 2 cut(s) 624, 1401
BsuTUI ATCGAT 1 cut(s) 14
BtsCI GGATG 3 cut(s) 781, 1255, 1983
BtsI GCAGTG 1 cut(s) 2625
BtsIMutI CAGTG 6 cut(s) 206, 322, 662, 912, 1004, 2625
BveI ACCTGC 1 cut(s) 2460
Cac8I GCNNGC 5 cut(s) 943, 1183, 2397, 2401, 2758
CaiI CAGNNNCTG 3 cut(s) 1003, 2180, 2720
CciI TCATGA 2 cut(s) 981, 2515
CfoI GCGC 1 cut(s) 1320
Cfr13I GGNCC 6 cut(s) 301, 407, 1264, 1399, 2270, 2472
ClaI ATCGAT 1 cut(s) 14
CseI GACGC 2 cut(s) 907, 1316
CspCI CAANNNNNGTGG 2 cut(s) 356, 391
DinI GGCGCC 1 cut(s) 1319
DpnI GATC 9 cut(s) 42, 281, 690, 934, 1458, 1598, 1803, 2415, 2526
DpnII GATC 9 cut(s) 40, 279, 688, 932, 1456, 1596, 1801, 2413, 2524
EaeI YGGCCR 1 cut(s) 622
Eam1104I CTCTTC 7 cut(s) 51, 559, 847, 1632, 1863, 2334, 2738
EarI CTCTTC 7 cut(s) 51, 559, 847, 1632, 1863, 2334, 2738
EciI GGCGGA 4 cut(s) 20, 1156, 1781, 2775
Ecl136II GAGCTC 2 cut(s) 556, 2578
Eco24I GRGCYC 3 cut(s) 558, 1135, 2580
Eco31I GGTCTC 1 cut(s) 446
Eco47I GGWCC 5 cut(s) 301, 407, 1264, 2270, 2472
Eco53kI GAGCTC 2 cut(s) 556, 2578
Eco57I CTGAAG 3 cut(s) 320, 470, 2274
Eco81I CCTNAGG 1 cut(s) 2430
Eco88I CYCGRG 4 cut(s) 50, 304, 1302, 1988
EcoICRI GAGCTC 2 cut(s) 556, 2578
EcoO109I RGGNCCY 2 cut(s) 301, 1264
EcoRII CCWGG 4 cut(s) 229, 1135, 1599, 2238
EcoT22I ATGCAT 2 cut(s) 859, 2317
EcoT38I GRGCYC 3 cut(s) 558, 1135, 2580
EgeI GGCGCC 1 cut(s) 1319
EheI GGCGCC 1 cut(s) 1319
Esp3I CGTCTC 1 cut(s) 1299
FalI AAGNNNNNCTT 2 cut(s) 1161, 1193
FaqI GGGAC 1 cut(s) 1593
FauNDI CATATG 1 cut(s) 2725
FokI GGATG 3 cut(s) 788, 1262, 1970
FriOI GRGCYC 3 cut(s) 558, 1135, 2580
FspBI CTAG 5 cut(s) 258, 927, 1026, 1784, 1980
GlaI GCGC 1 cut(s) 1319
GsaI CCCAGC 1 cut(s) 1815
GsuI CTGGAG 2 cut(s) 317, 2261
HaeII RGCGCY 1 cut(s) 1321
HaeIII GGCC 2 cut(s) 624, 1401
HgaI GACGC 2 cut(s) 907, 1316
HhaI GCGC 1 cut(s) 1320
Hin1I GRCGYC 2 cut(s) 918, 1318
Hin6I GCGC 1 cut(s) 1318
HinP1I GCGC 1 cut(s) 1318
HincII GTYRAC 2 cut(s) 1413, 2503
HindII GTYRAC 2 cut(s) 1413, 2503
HindIII AAGCTT 2 cut(s) 2408, 2639
HpaI GTTAAC 1 cut(s) 2503
HphI GGTGA 4 cut(s) 913, 1121, 1882, 1923
Hpy166II GTNNAC 5 cut(s) 472, 1413, 2042, 2375, 2503
Hpy8I GTNNAC 5 cut(s) 472, 1413, 2042, 2375, 2503
HpyAV CCTTC 9 cut(s) 104, 264, 335, 816, 1471, 1557, 1989, 2278, 2385
HpyCH4III ACNGT 9 cut(s) 210, 908, 1513, 1519, 1561, 1831, 2169, 2182, 2654
HpyCH4IV ACGT 4 cut(s) 481, 1451, 1582, 1819
HpyF10VI GCNNNNNNNGC 6 cut(s) 30, 33, 89, 95, 1178, 1187
HpySE526I ACGT 4 cut(s) 481, 1451, 1582, 1819
Hsp92I GRCGYC 2 cut(s) 918, 1318
HspAI GCGC 1 cut(s) 1318
KasI GGCGCC 1 cut(s) 1317
KpnI GGTACC 1 cut(s) 2354
KspAI GTTAAC 1 cut(s) 2503
Kzo9I GATC 9 cut(s) 40, 279, 688, 932, 1456, 1596, 1801, 2413, 2524
LguI GCTCTTC 5 cut(s) 51, 559, 1632, 2334, 2738
LmnI GCTCC 5 cut(s) 366, 561, 1138, 1195, 1228
Lsp1109I GCAGC 9 cut(s) 36, 45, 76, 811, 942, 1470, 1723, 2625, 2707
LweI GCATC 5 cut(s) 489, 661, 1873, 1992, 2743
MaeI CTAG 5 cut(s) 258, 927, 1026, 1784, 1980
MaeII ACGT 4 cut(s) 481, 1451, 1582, 1819
MaeIII GTNAC 8 cut(s) 185, 509, 919, 1028, 1109, 1447, 1513, 2182
MalI GATC 9 cut(s) 42, 281, 690, 934, 1458, 1598, 1803, 2415, 2526
MboI GATC 9 cut(s) 40, 279, 688, 932, 1456, 1596, 1801, 2413, 2524
MfeI CAATTG 3 cut(s) 383, 1149, 1835
MflI RGATCY 3 cut(s) 40, 932, 2524
MhlI GDGCHC 5 cut(s) 558, 742, 1135, 2580, 2733
Mly113I GGCGCC 1 cut(s) 1318
MlyI GAGTC 5 cut(s) 218, 435, 584, 776, 1367
MmeI TCCRAC 3 cut(s) 434, 2097, 2469
Mph1103I ATGCAT 2 cut(s) 859, 2317
MroXI GAANNNNTTC 3 cut(s) 333, 857, 2328
MseI TTAA 6 cut(s) 1278, 1607, 1697, 2010, 2130, 2502
MslI CAYNNNNRTG 2 cut(s) 1420, 2601
MspA1I CMGCKG 3 cut(s) 941, 1483, 2616
MspR9I CCNGG 4 cut(s) 231, 1137, 1601, 2240
MunI CAATTG 3 cut(s) 383, 1149, 1835
Mva1269I GAATGC 2 cut(s) 857, 859
MvaI CCWGG 4 cut(s) 231, 1137, 1601, 2240
MvnI CGCG 1 cut(s) 2337
MwoI GCNNNNNNNGC 6 cut(s) 30, 33, 89, 95, 1178, 1187
NarI GGCGCC 1 cut(s) 1318
NdeI CATATG 1 cut(s) 2725
NdeII GATC 9 cut(s) 40, 279, 688, 932, 1456, 1596, 1801, 2413, 2524
NlaIV GGNNCC 6 cut(s) 303, 380, 934, 1134, 1319, 2352
NmuCI GTSAC 4 cut(s) 509, 919, 1109, 1513
NsiI ATGCAT 2 cut(s) 859, 2317
NspI RCATGY 2 cut(s) 602, 2319
PaeR7I CTCGAG 1 cut(s) 1302
PagI TCATGA 2 cut(s) 981, 2515
PciSI GCTCTTC 5 cut(s) 51, 559, 1632, 2334, 2738
PcsI WCGNNNNNNNCGW 1 cut(s) 1766
PctI GAATGC 2 cut(s) 857, 859
PdmI GAANNNNTTC 3 cut(s) 333, 857, 2328
PfeI GAWTC 8 cut(s) 169, 287, 994, 1220, 1657, 1949, 1976, 2457
PleI GAGTC 5 cut(s) 218, 434, 584, 776, 1367
PluTI GGCGCC 1 cut(s) 1321
PpsI GAGTC 5 cut(s) 218, 434, 584, 776, 1367
PpuMI RGGWCCY 2 cut(s) 301, 1264
PshBI ATTAAT 1 cut(s) 2130
Psp124BI GAGCTC 2 cut(s) 558, 2580
Psp1406I AACGTT 1 cut(s) 1451
Psp5II RGGWCCY 2 cut(s) 301, 1264
Psp6I CCWGG 4 cut(s) 229, 1135, 1599, 2238
PspFI CCCAGC 1 cut(s) 1811
PspGI CCWGG 4 cut(s) 229, 1135, 1599, 2238
PspN4I GGNNCC 6 cut(s) 303, 380, 934, 1134, 1319, 2352
PspPI GGNCC 6 cut(s) 301, 407, 1264, 1399, 2270, 2472
PspPPI RGGWCCY 2 cut(s) 301, 1264
PstI CTGCAG 1 cut(s) 1488
PstNI CAGNNNCTG 3 cut(s) 1003, 2180, 2720
PsuI RGATCY 3 cut(s) 40, 932, 2524
PvuII CAGCTG 1 cut(s) 941
RseI CAYNNNNRTG 2 cut(s) 1420, 2601
SacI GAGCTC 2 cut(s) 558, 2580
SapI GCTCTTC 5 cut(s) 51, 559, 1632, 2334, 2738
SaqAI TTAA 6 cut(s) 1278, 1607, 1697, 2010, 2130, 2502
Sau3AI GATC 9 cut(s) 40, 279, 688, 932, 1456, 1596, 1801, 2413, 2524
Sau96I GGNCC 6 cut(s) 301, 407, 1264, 1399, 2270, 2472
ScaI AGTACT 2 cut(s) 1788, 2259
SchI GAGTC 5 cut(s) 218, 435, 584, 776, 1367
ScrFI CCNGG 4 cut(s) 231, 1137, 1601, 2240
SduI GDGCHC 5 cut(s) 558, 742, 1135, 2580, 2733
SfaNI GCATC 5 cut(s) 489, 661, 1873, 1992, 2743
SfcI CTRYAG 3 cut(s) 462, 1484, 2737
SfoI GGCGCC 1 cut(s) 1319
Sfr274I CTCGAG 1 cut(s) 1302
SinI GGWCC 5 cut(s) 301, 407, 1264, 2270, 2472
SlaI CTCGAG 1 cut(s) 1302
SmiMI CAYNNNNRTG 2 cut(s) 1420, 2601
SmlI CTYRAG 3 cut(s) 366, 756, 1302
SmoI CTYRAG 3 cut(s) 366, 756, 1302
SpeI ACTAGT 1 cut(s) 1783
SsiI CCGC 9 cut(s) 5, 828, 1141, 1481, 1792, 1795, 1878, 2616, 2760
SspDI GGCGCC 1 cut(s) 1317
SspMI CTAG 5 cut(s) 258, 927, 1026, 1784, 1980
SstI GAGCTC 2 cut(s) 558, 2580
StyD4I CCNGG 4 cut(s) 229, 1135, 1599, 2238
TaaI ACNGT 9 cut(s) 210, 908, 1513, 1519, 1561, 1831, 2169, 2182, 2654
TaiI ACGT 4 cut(s) 484, 1454, 1585, 1822
TaqI TCGA 7 cut(s) 14, 562, 588, 815, 1303, 2005, 2670
TatI WGTACW 4 cut(s) 1786, 1826, 1831, 2257
TauI GCSGC 3 cut(s) 830, 1483, 1797
TfiI GAWTC 8 cut(s) 169, 287, 994, 1220, 1657, 1949, 1976, 2457
Tru1I TTAA 6 cut(s) 1278, 1607, 1697, 2010, 2130, 2502
Tru9I TTAA 6 cut(s) 1278, 1607, 1697, 2010, 2130, 2502
TscAI CASTG 6 cut(s) 213, 322, 669, 919, 1004, 2632
TseFI GTSAC 4 cut(s) 509, 919, 1109, 1513
TseI GCWGC 9 cut(s) 24, 33, 89, 824, 955, 1483, 1736, 2613, 2720
Tsp45I GTSAC 4 cut(s) 509, 919, 1109, 1513
TspGWI ACGGA 5 cut(s) 53, 436, 780, 1692, 2283
TspRI CASTG 6 cut(s) 213, 322, 669, 919, 1004, 2632
VpaK11BI GGWCC 5 cut(s) 301, 407, 1264, 2270, 2472
VspI ATTAAT 1 cut(s) 2130
XapI RAATTY 3 cut(s) 576, 1297, 1969
XceI RCATGY 2 cut(s) 602, 2319
XhoI CTCGAG 1 cut(s) 1302
XmnI GAANNNNTTC 3 cut(s) 333, 857, 2328
XspI CTAG 5 cut(s) 258, 927, 1026, 1784, 1980
ZrmI AGTACT 2 cut(s) 1788, 2259
Zsp2I ATGCAT 2 cut(s) 859, 2317
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.