Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0010113

Physical Location & Seq

Genomic Coordinates Reverse (-)

39358072 .. 39368481

Gene Structure 10410 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G027570.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2778 bp

ATGGCGGAGGTGTCGATGTGTAGGAGGAGCAGCCTGAGTCCGGATGAAGAGAGGATTTTGATAAAAGACATTGCTTTGGCTGCCGAAGCCAAATCCAAAGAGGGCGATACCTTCTTCTTGATTACCCAAAGATGGTGGCAACATTGGATTGATTATGTGAACCAAGAACAACAGCCCGACGTCTCAGAGCATTGTGATTTGGCTGATTCAAGTAGCTTCAAGAGGCCTGCTGGCATTGATAATTCCGATTTGATATCCGACGACGCCATTGAGATACAGGATACTTTATTAGAAGGCCGTGACTATGTGTTGCTCCCCCAACAAGTTTGGAACCAGTTGCATACATGGTATGGAGGTGGGCCAACATTACCCAGGAGAGTCATTAGTTCAGGTCCTTCTCACACAGAGATGGCTGTTGAAGTCTACCCTCTGCGTCTCCAATTGCTTGTGAAAGAAACCATTGGAGAGCTTCACAGAAGAGCTTGTGAAATCTTTGATCTTAGCCCGGAACAAGTATCCATTTGGGATTTCTATGGACGCAAGCAACATGCCCTCATGACCGACATTGATAAAACACTTGATGATGCGAATATACAAATGGACCAGGATATTCTGGTGGAGGTCCTTAGTCCTGACAATGGTACGAGACCGAGTGGATACACAAGTTCTGTTCGTTACGATGGATCTTTAGAAAAGGAAGCTGCCTCAGTTCTTGTAGAGCCTTCTAAGTCAAGCTTGTCGATTGCTGGAGGTTTATCTGCAAGCAAGGGTGCATCAAGAAGCTATAACACAGAGCTTGCACAAAGTCAAAGCCTGACTTCAGTTAGAGAATTGGATACTACTTATGGGACAATTGGTGTTAGTACAAGAGGTTCGTCTGGTGGTTTGACTGGGTTGCAGAACCTAGGGAATACTTGTTTTATGAACAGTGCTATACAATGCCTTGTTCATACACCAGAGTTCGCTAGATATTTTCGGGAAGATTATCATCAAGAGATAAACTGGGAAAACACTCTGGGTATGCGCGGTGAGCTAGCTCTAGCATTCGGCGAATTACTGCGGAAGCTTTGGGCACCCGGACGAACACCAGTTGCTCCTCGACCTTTTAAAACAAAACTTGCTCGTTTTGCCCCCCAATTCAGTGGTTACAATCAACATGATTCTCAGGAACTTTTGGCTTTTTTGCTAGATGGTCTTCATGAAGATCTGAATCGTGTGAAACAGAAACCTTATATAAAATCTAAAGATGCTGATGGTCGGCCTGATGAAGAAGTTGCTGATGAATATTGGGCAAACCACATTGCTCGTAATGATTCCATAATCGTCGATGTATGCCAAGGCCAATACAAATCAACTTTGGTTTGCCCTATTTGTAACAAAGTCTCTGTTACATTTGATCCCTTCATGTACCTATCATTGCCCTTGCAGTCCACCACAACTAGAACAATGACAGTAACAGTCTTTGCATGCAATGGAAGTGCGTTGCCATCTGCTTACACTGTTACAGTTCCAAAACAGGGACGTTGCCGGGACTTGATCCAGGCACTTAGCAATGCTAGCTCTGTGAAGCACAGTGAGAGGCTTTTGCTTGTTGAGATACAAAACCACATGATTCAGCGATTTCTGGAAGACCCATTAATATTATTATCTACCATCAAAGATGATGATCATCTTGCTGCTTACAAGGTTCAAAAGTCGGCGAAGAACACAAAATATCTTCAGTTGATACACCGTCGTAAGGACCAAGGAACTAGTGATGGCCAGATCACATCAGGATGGCTACCTTATGGAACACCTCTTCTGTCGGCTATCTCATGTGATGATGAAATCACAAGAGGCAACATACAGAACATGGTTCATACAATGCTTTCTCCAATGCTAAGAACTGAGAGTTTGGATCATACTGATATATCTGGTGCAAGATCTGCAATAGCGGCAGCAAACCCCTCTGGAAACTTGCGTGGTGAAATATGTACTGATTCCGCTATATCCAATTCAATGAATAATGATATCACCAGTTCTAAGCCAGTGAAATCACTAAAGTTGTCTCTTCAGTTGGTGGATGAAAGTAACGCATGCATTGATCTCTCAGTGGGGGAAGAGAAAGCTATCACATTGCCTTCGGCATCAACATCAATACTAGTATATGCTGATTGGTCACAGAAGCTTTTAGATAAATATCATACCCATTATCTGGAAAACTTGCCAGAAGTTTTTAAGTATGGACCTGTAACAAAGAAAGCCCGCACTGAACCTCTCTCCTTGTACACTTGCCTTGAAGCATTTCTACGTGAAGAACCACTGGTGCCTGAAGATATGTGGTACTGTCCCCAGTGCAAGGAGCGGCGACAAGCAAGTAAAAAGCTAGATCTTTGGAGGCTTCCCGAAGTGTTAGTCATCCATCTAAAGAGGTTCTCGTACAGCAGGTCAATGAAGCATAAACTGGAAACATTTGTCAACTTTCCCATTCATGACTTTGATCTCACCAATTACATTGCTCACAAAAGCAACTCTGGACATCAGCTTTACGAACTCTATGCTTTGACCAATCATTATGGTAGCATGGGTAGTGGGCATTACACTGCACATATCAAGCTTCTTGATGAGAACAGATGGTATAGTTTTGATGACAGTCATATATCACCCATAAATGAAGAAGATGTGAAGTCAGCTGCAGCATATGTACTGTTTTATCGGCGGGTAAAGAGTGAAGATTCCTTTGTTAGCAATGGAGTCCTATCCTGTGGAGGTGACAACAAAGCTGCCTCACACAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0019538 GO:0019941 GO:0030163 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0051603 GO:0071704 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04137 map04137

Pfam Domains

Protein Families

DUSP UCH USP7_C2

Protein Analysis

925

Amino Acids

103.87

Weight (kDa)

5.75

Isoelectric Point (pI)

49.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUSP	PF06337	35 - 128	3e-20	DUSP domain
Ubiquitin_UBP8	PF25242	153 - 185	6.4e-06	UBP8-like, ubiquitin-like domain
UCH	PF00443	297 - 898	4.8e-78	Ubiquitin carboxyl-terminal hydrolase
UCH_1	PF13423	747 - 880	7e-07	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010113)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40930 AT2G40930
fragaria_vesca	FvH4_1g29170 FvH4_1g29170
malus_domestica	MD17G1207100.v1.1
prunus_persica	Prupe.7G027100_v2.0.a1 Prupe.7G027100_v2.0.a1 Prupe.7G027100_v2.0.a1 Prupe.7G027100_v2.0.a1 Prupe.7G027100_v2.0.a1 Prupe.7G027100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0494551
rosa_laevigata	RLG00000022671
rosa_multiflora	Rmu_sc0000152.1_g000004
rosa_roxburghii	Rroxscaffold_6G00391080
rosa_rugosa	Rorug03G0265600
rosa_samantha	Rh3AG315800 Rh3BG351000 Rh3CG347800 Rh3DG350300
rosa_wichuraiana	Rw3G027570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	183
Acc36I	ACCTGC	1 cut(s)	2415
AccB1I	GGYRCC	2 cut(s)	1072, 2305
AccB7I	CCANNNNNTGG	1 cut(s)	2194
AccBSI	CCGCTC	1 cut(s)	2344
AccI	GTMKAC	1 cut(s)	423
AccII	CGCG	1 cut(s)	1026
AccIII	TCCGGA	1 cut(s)	40
AciI	CCGC	8 cut(s)	5, 1026, 1060, 1934, 1983, 2245, 2344, 2698
AclWI	GGATC	4 cut(s)	691, 1391, 1531, 1905
AcoI	YGGCCR	1 cut(s)	1759
AcuI	CTGAAG	4 cut(s)	804, 1703, 2036, 2331
AcyI	GRCGYC	2 cut(s)	180, 264
AfaI	GTAC	8 cut(s)	643, 865, 1409, 1975, 2267, 2324, 2420, 2685
AfiI	CCNNNNNNNGG	7 cut(s)	40, 132, 638, 1517, 1738, 2194, 2338
AgsI	TTSAA	6 cut(s)	210, 220, 419, 1691, 1998, 2279
AhlI	ACTAGT	2 cut(s)	1751, 2140
AjnI	CCWGG	3 cut(s)	371, 603, 1539
Alw26I	GTCTC	5 cut(s)	187, 440, 640, 1387, 2052
AlwI	GGATC	4 cut(s)	691, 1391, 1531, 1905
Aor13HI	TCCGGA	1 cut(s)	40
AoxI	GGCC	6 cut(s)	224, 295, 359, 1259, 1339, 1759
ApeKI	GCWGC	8 cut(s)	30, 80, 701, 1676, 1937, 2672, 2675, 2762
ArsI	GACNNNNNNTTYG	2 cut(s)	2379, 2411
AseI	ATTAAT	1 cut(s)	1637
Asp700I	GAANNNNTTC	1 cut(s)	2283
AspA2I	CCTAGG	1 cut(s)	904
AspLEI	GCGC	1 cut(s)	1026
AspS9I	GGNCC	6 cut(s)	359, 392, 601, 622, 1741, 2225
AsuC2I	CCSGG	3 cut(s)	506, 1077, 1529
AsuHPI	GGTGA	6 cut(s)	1040, 1976, 2005, 2476, 2634, 2762
AsuNHI	GCTAGC	2 cut(s)	1033, 1556
AvaII	GGWCC	5 cut(s)	392, 601, 622, 1741, 2225
AvrII	CCTAGG	1 cut(s)	904
BaeGI	GKGCMC	1 cut(s)	1075
BaeI	ACNNNNGTAYC	2 cut(s)	649, 682
BalI	TGGCCA	1 cut(s)	1761
BanI	GGYRCC	2 cut(s)	1072, 2305
BarI	GAAGNNNNNNTAC	2 cut(s)	2271, 2303
BbsI	GAAGAC	2 cut(s)	1187, 1635
BbvI	GCAGC	8 cut(s)	42, 67, 688, 1663, 1949, 2659, 2687, 2749
BceAI	ACGGC	1 cut(s)	282
BcgI	CGANNNNNNTGC	2 cut(s)	2519, 2553
BciT130I	CCWGG	3 cut(s)	373, 605, 1541
BciVI	GTATCC	4 cut(s)	274, 526, 650, 829
BclI	TGATCA	1 cut(s)	1666
BcnI	CCSGG	3 cut(s)	506, 1077, 1529
BcoDI	GTCTC	5 cut(s)	187, 440, 640, 1387, 2052
BcuI	ACTAGT	2 cut(s)	1751, 2140
BfmI	CTRYAG	1 cut(s)	2673
BfuAI	ACCTGC	1 cut(s)	2415
BfuI	GTATCC	4 cut(s)	274, 526, 650, 829
BglII	AGATCT	3 cut(s)	1204, 1922, 2368
BlnI	CCTAGG	1 cut(s)	904
Bme1390I	CCNGG	6 cut(s)	373, 506, 605, 1077, 1529, 1541
Bme18I	GGWCC	5 cut(s)	392, 601, 622, 1741, 2225
BmgT120I	GGNCC	6 cut(s)	359, 392, 601, 622, 1741, 2225
BmiI	GGNNCC	3 cut(s)	332, 1074, 2307
BmrFI	CCNGG	6 cut(s)	373, 506, 605, 1077, 1529, 1541
BmrI	ACTGGG	3 cut(s)	900, 1012, 2326
BmsI	GCATC	4 cut(s)	574, 782, 1237, 2135
BmtI	GCTAGC	2 cut(s)	1037, 1560
BmuI	ACTGGG	3 cut(s)	900, 1012, 2326
BpiI	GAAGAC	2 cut(s)	1187, 1635
BpmI	CTGGAG	1 cut(s)	768
BpuMI	CCSGG	3 cut(s)	506, 1077, 1529
BsaAI	YACGTR	1 cut(s)	2291
BsaBI	GATNNNNATC	5 cut(s)	987, 1209, 1665, 1668, 2178
BsaHI	GRCGYC	2 cut(s)	180, 264
BsaI	GGTCTC	1 cut(s)	640
BsaJI	CCNNGG	4 cut(s)	371, 904, 1336, 1744
BsaWI	WCCGGW	1 cut(s)	40
Bsc4I	CCNNNNNNNGG	7 cut(s)	40, 132, 638, 1517, 1738, 2194, 2338
Bse1I	ACTGG	9 cut(s)	334, 895, 1007, 1088, 2016, 2027, 2307, 2332, 2448
Bse3DI	GCAATG	8 cut(s)	69, 1299, 1415, 1477, 1558, 2114, 2493, 2734
Bse8I	GATNNNNATC	5 cut(s)	987, 1209, 1665, 1668, 2178
BseAI	TCCGGA	1 cut(s)	40
BseBI	CCWGG	3 cut(s)	373, 605, 1541
BseDI	CCNNGG	4 cut(s)	371, 904, 1336, 1744
BseGI	GGATG	4 cut(s)	49, 1781, 2068, 2397
BseJI	GATNNNNATC	5 cut(s)	987, 1209, 1665, 1668, 2178
BseLI	CCNNNNNNNGG	7 cut(s)	40, 132, 638, 1517, 1738, 2194, 2338
BseMI	GCAATG	8 cut(s)	69, 1299, 1415, 1477, 1558, 2114, 2493, 2734
BseMII	CTCAG	6 cut(s)	26, 198, 720, 1178, 1878, 2103
BseNI	ACTGG	9 cut(s)	334, 895, 1007, 1088, 2016, 2027, 2307, 2332, 2448
BseRI	GAGGAG	2 cut(s)	40, 1086
BseSI	GKGCMC	1 cut(s)	1075
BseXI	GCAGC	8 cut(s)	42, 67, 688, 1663, 1949, 2659, 2687, 2749
BsgI	GTGCAG	1 cut(s)	2568
Bsh1236I	CGCG	1 cut(s)	1026
BshFI	GGCC	6 cut(s)	226, 297, 361, 1261, 1341, 1761
BshNI	GGYRCC	2 cut(s)	1072, 2305
BsiSI	CCGG	4 cut(s)	41, 506, 1077, 1528
BslFI	GGGAC	4 cut(s)	862, 1533, 1544, 2313
BslI	CCNNNNNNNGG	7 cut(s)	40, 132, 638, 1517, 1738, 2194, 2338
BsmAI	GTCTC	5 cut(s)	187, 440, 640, 1387, 2052
BsmBI	CGTCTC	2 cut(s)	187, 440
BsmFI	GGGAC	4 cut(s)	862, 1533, 1544, 2313
BsmI	GAATGC	1 cut(s)	1043
BsnI	GGCC	6 cut(s)	226, 297, 361, 1261, 1341, 1761
Bso31I	GGTCTC	1 cut(s)	640
Bsp1286I	GDGCHC	1 cut(s)	1075
Bsp13I	TCCGGA	1 cut(s)	40
Bsp1407I	TGTACA	1 cut(s)	2265
BspACI	CCGC	8 cut(s)	5, 1026, 1060, 1934, 1983, 2245, 2344, 2698
BspANI	GGCC	6 cut(s)	226, 297, 361, 1261, 1341, 1761
BspCNI	CTCAG	6 cut(s)	27, 197, 719, 1177, 1879, 2102
BspEI	TCCGGA	1 cut(s)	40
BspFNI	CGCG	1 cut(s)	1026
BspHI	TCATGA	3 cut(s)	555, 1198, 2470
BspLI	GGNNCC	3 cut(s)	332, 1074, 2307
BspMAI	CTGCAG	1 cut(s)	2677
BspMI	ACCTGC	1 cut(s)	2415
BspOI	GCTAGC	2 cut(s)	1037, 1560
BspPI	GGATC	4 cut(s)	691, 1391, 1531, 1905
BspQI	GCTCTTC	1 cut(s)	472
BspT107I	GGYRCC	2 cut(s)	1072, 2305
BspTNI	GGTCTC	1 cut(s)	640
BsrBI	CCGCTC	1 cut(s)	2344
BsrDI	GCAATG	8 cut(s)	69, 1299, 1415, 1477, 1558, 2114, 2493, 2734
BsrGI	TGTACA	1 cut(s)	2265
BsrI	ACTGG	9 cut(s)	334, 895, 1007, 1088, 2016, 2027, 2307, 2332, 2448
BssECI	CCNNGG	4 cut(s)	371, 904, 1336, 1744
BssNI	GRCGYC	2 cut(s)	180, 264
BssT1I	CCWWGG	3 cut(s)	904, 1336, 1744
Bst2UI	CCWGG	3 cut(s)	373, 605, 1541
Bst6I	CTCTTC	5 cut(s)	42, 472, 1803, 2055, 2094
BstACI	GRCGYC	2 cut(s)	180, 264
BstAPI	GCANNNNNTGC	1 cut(s)	1925
BstAUI	TGTACA	1 cut(s)	2265
BstBAI	YACGTR	1 cut(s)	2291
BstF5I	GGATG	4 cut(s)	49, 1781, 2068, 2397
BstFNI	CGCG	1 cut(s)	1026
BstHHI	GCGC	1 cut(s)	1026
BstMAI	GTCTC	5 cut(s)	187, 440, 640, 1387, 2052
BstMWI	GCNNNNNNNGC	7 cut(s)	80, 86, 1030, 1127, 1557, 1925, 1934
BstNI	CCWGG	3 cut(s)	373, 605, 1541
BstNSI	RCATGY	3 cut(s)	551, 1470, 2079
BstSCI	CCNGG	6 cut(s)	371, 504, 603, 1075, 1527, 1539
BstSFI	CTRYAG	1 cut(s)	2673
BstSLI	GKGCMC	1 cut(s)	1075
BstUI	CGCG	1 cut(s)	1026
BstV1I	GCAGC	8 cut(s)	42, 67, 688, 1663, 1949, 2659, 2687, 2749
BstV2I	GAAGAC	2 cut(s)	1187, 1635
BstX2I	RGATCY	4 cut(s)	683, 1204, 1922, 2368
BstXI	CCANNNNNNTGG	1 cut(s)	1142
BstYI	RGATCY	4 cut(s)	683, 1204, 1922, 2368
BsuI	GTATCC	4 cut(s)	274, 526, 650, 829
BsuRI	GGCC	6 cut(s)	226, 297, 361, 1261, 1341, 1761
BtsCI	GGATG	4 cut(s)	49, 1781, 2068, 2397
BtsI	GCAGTG	1 cut(s)	2580
BveI	ACCTGC	1 cut(s)	2415
CciI	TCATGA	3 cut(s)	555, 1198, 2470
CfoI	GCGC	1 cut(s)	1026
Cfr13I	GGNCC	6 cut(s)	359, 392, 601, 622, 1741, 2225
CseI	GACGC	3 cut(s)	272, 422, 546
Csp6I	GTAC	8 cut(s)	642, 864, 1408, 1974, 2266, 2323, 2419, 2684
CspCI	CAANNNNNGTGG	2 cut(s)	116, 151
CviQI	GTAC	8 cut(s)	642, 864, 1408, 1974, 2266, 2323, 2419, 2684
DraI	TTTAAA	1 cut(s)	1108
EaeI	YGGCCR	1 cut(s)	1759
Eam1104I	CTCTTC	5 cut(s)	42, 472, 1803, 2055, 2094
EarI	CTCTTC	5 cut(s)	42, 472, 1803, 2055, 2094
EciI	GGCGGA	1 cut(s)	20
Eco130I	CCWWGG	3 cut(s)	904, 1336, 1744
Eco147I	AGGCCT	1 cut(s)	226
Eco31I	GGTCTC	1 cut(s)	640
Eco32I	GATATC	2 cut(s)	255, 2011
Eco47I	GGWCC	5 cut(s)	392, 601, 622, 1741, 2225
Eco57I	CTGAAG	4 cut(s)	804, 1703, 2036, 2331
EcoO109I	RGGNCCY	2 cut(s)	392, 622
EcoRII	CCWGG	3 cut(s)	371, 603, 1539
EcoRV	GATATC	2 cut(s)	255, 2011
EcoT14I	CCWWGG	3 cut(s)	904, 1336, 1744
EcoT22I	ATGCAT	1 cut(s)	2081
ErhI	CCWWGG	3 cut(s)	904, 1336, 1744
Esp3I	CGTCTC	2 cut(s)	187, 440
FalI	AAGNNNNNCTT	4 cut(s)	719, 751, 802, 834
FaqI	GGGAC	4 cut(s)	862, 1533, 1544, 2313
FauI	CCCGC	2 cut(s)	2252, 2691
FauNDI	CATATG	1 cut(s)	2680
FbaI	TGATCA	1 cut(s)	1666
FblI	GTMKAC	1 cut(s)	423
FokI	GGATG	4 cut(s)	56, 1788, 2075, 2384
GlaI	GCGC	1 cut(s)	1025
GsuI	CTGGAG	1 cut(s)	768
HaeIII	GGCC	6 cut(s)	226, 297, 361, 1261, 1341, 1761
HapII	CCGG	4 cut(s)	41, 506, 1077, 1528
HgaI	GACGC	3 cut(s)	272, 422, 546
HhaI	GCGC	1 cut(s)	1026
Hin1I	GRCGYC	2 cut(s)	180, 264
Hin6I	GCGC	1 cut(s)	1024
HinP1I	GCGC	1 cut(s)	1024
HincII	GTYRAC	1 cut(s)	2458
HindII	GTYRAC	1 cut(s)	2458
HindIII	AAGCTT	4 cut(s)	733, 1064, 2165, 2594
HpaII	CCGG	4 cut(s)	41, 506, 1077, 1528
HphI	GGTGA	6 cut(s)	1040, 1976, 2005, 2476, 2634, 2762
Hpy166II	GTNNAC	5 cut(s)	160, 424, 1431, 2268, 2458
Hpy188I	TCNGA	4 cut(s)	187, 247, 259, 1209
Hpy8I	GTNNAC	5 cut(s)	160, 424, 1431, 2268, 2458
Hpy99I	CGWCG	5 cut(s)	182, 263, 266, 1328, 1737
HpyAV	CCTTC	6 cut(s)	121, 287, 405, 732, 1411, 2130
HpyCH4IV	ACGT	3 cut(s)	180, 1522, 2290
HpyF10VI	GCNNNNNNNGC	7 cut(s)	80, 86, 1030, 1127, 1557, 1925, 1934
HpySE526I	ACGT	3 cut(s)	180, 1522, 2290
Hsp92I	GRCGYC	2 cut(s)	180, 264
HspAI	GCGC	1 cut(s)	1024
Kpn2I	TCCGGA	1 cut(s)	40
Ksp22I	TGATCA	1 cut(s)	1666
LguI	GCTCTTC	1 cut(s)	472
LmnI	GCTCC	4 cut(s)	27, 318, 1099, 2341
Lsp1109I	GCAGC	8 cut(s)	42, 67, 688, 1663, 1949, 2659, 2687, 2749
LweI	GCATC	4 cut(s)	574, 782, 1237, 2135
MaeII	ACGT	3 cut(s)	180, 1522, 2290
MbiI	CCGCTC	1 cut(s)	2344
MfeI	CAATTG	2 cut(s)	440, 852
MflI	RGATCY	4 cut(s)	683, 1204, 1922, 2368
MhlI	GDGCHC	1 cut(s)	1075
MlsI	TGGCCA	1 cut(s)	1761
MluCI	AATT	8 cut(s)	241, 440, 830, 852, 1052, 1136, 1993, 2488
MluNI	TGGCCA	1 cut(s)	1761
MlyI	GAGTC	3 cut(s)	46, 387, 2742
MmeI	TCCRAC	1 cut(s)	282
Mox20I	TGGCCA	1 cut(s)	1761
Mph1103I	ATGCAT	1 cut(s)	2081
MroI	TCCGGA	1 cut(s)	40
MroXI	GAANNNNTTC	1 cut(s)	2283
MscI	TGGCCA	1 cut(s)	1761
MseI	TTAA	3 cut(s)	1107, 1637, 2217
MslI	CAYNNNNRTG	2 cut(s)	407, 1774
Msp20I	TGGCCA	1 cut(s)	1761
MspA1I	CMGCKG	1 cut(s)	2672
MspI	CCGG	4 cut(s)	41, 506, 1077, 1528
MspR9I	CCNGG	6 cut(s)	373, 506, 605, 1077, 1529, 1541
MunI	CAATTG	2 cut(s)	440, 852
Mva1269I	GAATGC	1 cut(s)	1043
MvaI	CCWGG	3 cut(s)	373, 605, 1541
MvnI	CGCG	1 cut(s)	1026
MwoI	GCNNNNNNNGC	7 cut(s)	80, 86, 1030, 1127, 1557, 1925, 1934
NciI	CCSGG	3 cut(s)	506, 1077, 1529
NdeI	CATATG	1 cut(s)	2680
NheI	GCTAGC	2 cut(s)	1033, 1556
NlaIV	GGNNCC	3 cut(s)	332, 1074, 2307
NmuCI	GTSAC	3 cut(s)	299, 2157, 2750
NsiI	ATGCAT	1 cut(s)	2081
NspI	RCATGY	3 cut(s)	551, 1470, 2079
PaeI	GCATGC	2 cut(s)	1470, 2079
PagI	TCATGA	3 cut(s)	555, 1198, 2470
PceI	AGGCCT	1 cut(s)	226
PciSI	GCTCTTC	1 cut(s)	472
PctI	GAATGC	1 cut(s)	1043
PdmI	GAANNNNTTC	1 cut(s)	2283
PfeI	GAWTC	7 cut(s)	206, 1160, 1210, 1313, 1612, 1979, 2714
PflMI	CCANNNNNTGG	1 cut(s)	2194
PleI	GAGTC	3 cut(s)	45, 386, 2741
PpsI	GAGTC	3 cut(s)	45, 386, 2741
Ppu21I	YACGTR	1 cut(s)	2291
PpuMI	RGGWCCY	2 cut(s)	392, 622
PshBI	ATTAAT	1 cut(s)	1637
Psp5II	RGGWCCY	2 cut(s)	392, 622
Psp6I	CCWGG	3 cut(s)	371, 603, 1539
PspGI	CCWGG	3 cut(s)	371, 603, 1539
PspN4I	GGNNCC	3 cut(s)	332, 1074, 2307
PspPI	GGNCC	6 cut(s)	359, 392, 601, 622, 1741, 2225
PspPPI	RGGWCCY	2 cut(s)	392, 622
PsrI	GAACNNNNNNTAC	2 cut(s)	856, 888
PstI	CTGCAG	1 cut(s)	2677
PsuI	RGATCY	4 cut(s)	683, 1204, 1922, 2368
PvuII	CAGCTG	1 cut(s)	2672
RsaI	GTAC	8 cut(s)	643, 865, 1409, 1975, 2267, 2324, 2420, 2685
RsaNI	GTAC	8 cut(s)	642, 864, 1408, 1974, 2266, 2323, 2419, 2684
RseI	CAYNNNNRTG	2 cut(s)	407, 1774
SapI	GCTCTTC	1 cut(s)	472
SaqAI	TTAA	3 cut(s)	1107, 1637, 2217
Sau96I	GGNCC	6 cut(s)	359, 392, 601, 622, 1741, 2225
SchI	GAGTC	3 cut(s)	46, 387, 2742
ScrFI	CCNGG	6 cut(s)	373, 506, 605, 1077, 1529, 1541
SduI	GDGCHC	1 cut(s)	1075
SfaNI	GCATC	4 cut(s)	574, 782, 1237, 2135
SfcI	CTRYAG	1 cut(s)	2673
SinI	GGWCC	5 cut(s)	392, 601, 622, 1741, 2225
SmiMI	CAYNNNNRTG	2 cut(s)	407, 1774
SpeI	ACTAGT	2 cut(s)	1751, 2140
SphI	GCATGC	2 cut(s)	1470, 2079
Sse9I	AATT	8 cut(s)	241, 440, 830, 852, 1052, 1136, 1993, 2488
SseBI	AGGCCT	1 cut(s)	226
SsiI	CCGC	8 cut(s)	5, 1026, 1060, 1934, 1983, 2245, 2344, 2698
SspI	AATATT	2 cut(s)	1286, 1641
StuI	AGGCCT	1 cut(s)	226
StyD4I	CCNGG	6 cut(s)	371, 504, 603, 1075, 1527, 1539
StyI	CCWWGG	3 cut(s)	904, 1336, 1744
TaiI	ACGT	3 cut(s)	183, 1525, 2293
TaqI	TCGA	4 cut(s)	14, 740, 1099, 1326
TaqII	GACCGA	2 cut(s)	575, 664
TasI	AATT	8 cut(s)	241, 440, 830, 852, 1052, 1136, 1993, 2488
TatI	WGTACW	4 cut(s)	863, 1973, 2265, 2683
TauI	GCSGC	2 cut(s)	1937, 2347
TfiI	GAWTC	7 cut(s)	206, 1160, 1210, 1313, 1612, 1979, 2714
Tru1I	TTAA	3 cut(s)	1107, 1637, 2217
Tru9I	TTAA	3 cut(s)	1107, 1637, 2217
TseFI	GTSAC	3 cut(s)	299, 2157, 2750
TseI	GCWGC	8 cut(s)	30, 80, 701, 1676, 1937, 2672, 2675, 2762
Tsp45I	GTSAC	3 cut(s)	299, 2157, 2750
Van91I	CCANNNNNTGG	1 cut(s)	2194
VpaK11BI	GGWCC	5 cut(s)	392, 601, 622, 1741, 2225
VspI	ATTAAT	1 cut(s)	1637
XceI	RCATGY	3 cut(s)	551, 1470, 2079
XmaJI	CCTAGG	1 cut(s)	904
XmiI	GTMKAC	1 cut(s)	423
XmnI	GAANNNNTTC	1 cut(s)	2283
ZraI	GACGTC	1 cut(s)	181
Zsp2I	ATGCAT	1 cut(s)	2081

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.