FvH4_1g29170

Belongs to the peptidase C19 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0010113
Physical Location & Seq
Reverse (-)
21824998 .. 21833781
8784 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g29170.t1

Sequence Viewer

Length: 2700 bp
ATGGCGGAGGTGTCGATGTGTAGGAGGAGGAGCAGCAGCAGCCTGAGTCCGGAGGAAGAGAGGATTTTGATAAAAGACATTGCTTTGGCTGCCGAAGTCAAATCCAAAGAGGGCGATACCTTCTTCCTGATTACCCAGAGATGGTGGCAACACTGGATTGATTATGTGAACCAAGAACACCCCGATGTCTCGGAGCATCGCCCTGCCGGTATTGATAATTCCGACTTGATATACGATGCTGCAGCGGCAGAGGACACCGTTGACATACATGATACTTTACTGGAAGGCCGTGATTATGTCTTGCTCCCTCAACAAGTTTGGAACCAGTTGCATTCATGGTATGGTGGTGGTCCAACATTACCCAGAAGAGTCATTAGTTCAGGCCCTTCTCGCTCTGAGATGGCTGTTGAAGTCTACCCTCTTCGTCTTCAATTGCTTCTCTTCCCTAAAGCTGCCCGCTCCACTATACGAATAAGCAAGAAGGAAACCATTGGAGAGCTTCATAAAAGAGCTTGTGAAATCTTTGATCTTATCCCCGACCAAGTATGCATTTGGGATTTCTATGGACGCAAGCGACATGCCCTCATGACTGACATCGATAAAACACTTGATGATGCAAATATACAAATGGACCAGGATATTCTGGTGGAAGTCCTTAGTCTTGACAATGGAGGTTTATCTGCAAGCAAGGGTGCATCAAGAAGCCATAACACAGAGCTTGCACAAAGTCAAAGCCTGACTTCAGTTAAAGAATTGGATACTGCTTATGGGACAACTGGTGTTAGTACAAGGGGTTCGTCTGGTGGTTTGACTGGGTTGCAGAACCTAGGGAATACTTGTTTTATGAACAGTGCTATACAATGCCTTGTTCATACACCAGAGTTCGCTAGATATTTTCGGGAAGATTATCATCAAGAGATAAACTGGGAAAACACTCTGGGCATGCGGGGTGAGTTAGCTCTAGCGTTTGGCGAATTACTGCGGAAGCTTTGGGCACCCGGACGTACACCAGTTGCTCCTCGACCTTTTAAAACAAAACTTGCTCGTTTTGCCCCACAGTTTAGTGGTTACAATCAACATGATTCTCAGGAACTTTTGGCATTTTTGCTAGATGGTCTTCATGAAGATCTGAATCGTGTGAAACAGAAACCTTATATAAAATCTAAAGATGCTGATGGTCGGCCTGATGAAGAAGTTGCTGATGAATATTGGGCAAACCACATTGCTCGTAACGATTCCATAATTGTCGATGTATGCCAAGGTCAATACAAATCAACTTTGGTTTGCCCCATTTGTAACAAGGTCTCTGTTACATTTGATCCCTTCATGTACCTTTCATTGCCCCTGCAGTCCACCACAACTAGAACAATGACAGTAACAGTTTTTACATGCAATGGAAGTGCGTTGCCATCTACTTACACTGTCACAGTCCCAAAACAGGGACGTTGCCGGGACTTGATCCAGGCACTTAGCAATGCTAGCTCTGTGAAGCACAGCGAGAGGCTTTTGCTTGTCGAGATACAAAACCATATGATTCAGCGGTTTCTTGAAGACCCATTAATATTGTTATCTACCATCAAAGATGATGACCATCTTGCTGCTTACAAGGTGCCAAAGTTTGTGAAGAACACAAAATATCTTCAGCTGATACACCGTCGTAAGGACCAAGGAAGTAGTGATGACCAGATCACATCAGGATGGTTACCTTATGGAACACCTCTTCTGTTGTCTATCCCATGTGATGATGAAATCACAAGAGGCGACATACAGAAAATGGTTCATACAATGCTTTCTCCAATGTTAAGAACCGAGAGTTTGGATCATACCGATATATCTGGTGTAAGCTCTGCAATAGCAGCATCAAACCCCGCTGGCAACTTGGGGGAAGCATGTACCGATTCCGCTATATCTAATTCAATGAATAATGAAATGACCAGTTCTAAACCAGTGAAATCACTTGAGTTGCCTCTTCAGTTGGTGGATGAAAGTAACGCATGCATTGATCTTTCAGTAGGTGAAGAGAAAGCTATCACATTGCCTTCGGCATCTTCATCATCCATACTAGTATATGCTGATTGGTCACAGAAGCTTTTAGATAAATATCATACCCATTATCTGGAAAACTTGCCAGAAGTTTTTAAGTATGGACCTGTAACAAAGAAAGCTCGCACTGAACCTCTTTCCTTGTACACTTGCCTTGAAGCATTTCTACGTGAAGAACCACTGGTGCCTGAAGATATGTGGTACTGCCCCCAGTGCAAGGAGCGGCGACAAGCAAGTAAAAAGCTAGATCTTTGGAGGCTTCCTGAAGTGTTAGTCATCCATCTAAAGAGGTTCTTGTACAGCCGGTCAATGAAGCATAAGCTGGAAACATTTGTCAGCTTCCCTATACATGACTTTGATCTAACCAATTACATTGCTCACAAAAGCAATGCTGGACATCAGCTTTATGAACTCTATGCTTTGACCAATCATTATGGCAACATGGGTAGTGGGCATTACACTGCACATATCAAGCTTCTTGATGAGAACAGATGGTATAGTTTTGATGACAGTCACATATCACCCATAAATGAAGATGATGTGAAGTCAGCTGCAGCATATGTGCTGTTTTATCGCCGGGTGAAGAGTGAAGATTCGTTTGTTGGCAATGGAGACCTATCCTGTGGAGGTGACAACAAAGTTGTCTCACAAAAGTAG

Protein Analysis

900

Amino Acids

101.41

Weight (kDa)

5.82

Isoelectric Point (pI)

49.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUSP PF06337 38 - 125 1.9e-21 DUSP domain
Ubiquitin_UBP8 PF25242 151 - 194 5.9e-09 UBP8-like, ubiquitin-like domain
UCH PF00443 271 - 872 8.6e-77 Ubiquitin carboxyl-terminal hydrolase
UCH_1 PF13423 722 - 854 2.6e-06 Ubiquitin carboxyl-terminal hydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 994, 1609, 2227
AccB7I CCANNNNNTGG 1 cut(s) 2116
AccBSI CCGCTC 2 cut(s) 459, 2266
AccI GTMKAC 1 cut(s) 414
AccIII TCCGGA 1 cut(s) 49
AciI CCGC 9 cut(s) 5, 245, 457, 946, 982, 1540, 1869, 1902, 2266
AclWI GGATC 3 cut(s) 1313, 1453, 1827
AcuI CTGAAG 5 cut(s) 726, 1625, 1955, 2253, 2328
AfaI GTAC 7 cut(s) 787, 1006, 1331, 1894, 2189, 2246, 2342
AfiI CCNNNNNNNGG 7 cut(s) 49, 141, 1438, 1439, 1660, 2116, 2260
AgsI TTSAA 5 cut(s) 410, 431, 1550, 1917, 2201
AhlI ACTAGT 1 cut(s) 2062
AjnI CCWGG 2 cut(s) 633, 1461
Alw26I GTCTC 4 cut(s) 193, 1309, 2649, 2692
AlwI GGATC 3 cut(s) 1313, 1453, 1827
Aor13HI TCCGGA 1 cut(s) 49
AoxI GGCC 3 cut(s) 286, 382, 1181
AseI ATTAAT 1 cut(s) 1559
Asp700I GAANNNNTTC 1 cut(s) 2205
AspA2I CCTAGG 1 cut(s) 826
AspS9I GGNCC 5 cut(s) 350, 383, 631, 1663, 2147
AsuC2I CCSGG 3 cut(s) 999, 1451, 2621
AsuHPI GGTGA 5 cut(s) 962, 2027, 2556, 2635, 2684
AsuNHI GCTAGC 1 cut(s) 1478
AvaII GGWCC 4 cut(s) 350, 631, 1663, 2147
AvrII CCTAGG 1 cut(s) 826
BaeGI GKGCMC 1 cut(s) 997
BanI GGYRCC 3 cut(s) 994, 1609, 2227
BarI GAAGNNNNNNTAC 2 cut(s) 2193, 2225
BbsI GAAGAC 3 cut(s) 419, 1109, 1557
BceAI ACGGC 1 cut(s) 273
BciT130I CCWGG 2 cut(s) 635, 1463
BciVI GTATCC 1 cut(s) 751
BcnI CCSGG 3 cut(s) 999, 1451, 2621
BcoDI GTCTC 4 cut(s) 193, 1309, 2649, 2692
BcuI ACTAGT 1 cut(s) 2062
BfaI CTAG 8 cut(s) 827, 888, 962, 1109, 1362, 1479, 2063, 2288
BfmI CTRYAG 3 cut(s) 240, 1346, 2595
BfuI GTATCC 1 cut(s) 751
BglII AGATCT 2 cut(s) 1126, 2290
BlnI CCTAGG 1 cut(s) 826
Bme1390I CCNGG 5 cut(s) 635, 999, 1451, 1463, 2621
Bme18I GGWCC 4 cut(s) 350, 631, 1663, 2147
BmgT120I GGNCC 5 cut(s) 350, 383, 631, 1663, 2147
BmiI GGNNCC 4 cut(s) 323, 996, 1611, 2229
BmrFI CCNGG 5 cut(s) 635, 999, 1451, 1463, 2621
BmrI ACTGGG 3 cut(s) 822, 934, 2248
BmsI GCATC 7 cut(s) 205, 226, 604, 704, 1159, 1868, 2054
BmtI GCTAGC 1 cut(s) 1482
BmuI ACTGGG 3 cut(s) 822, 934, 2248
BpiI GAAGAC 3 cut(s) 419, 1109, 1557
BpuEI CTTGAG 1 cut(s) 1979
BpuMI CCSGG 3 cut(s) 999, 1451, 2621
Bsa29I ATCGAT 1 cut(s) 597
BsaAI YACGTR 1 cut(s) 2213
BsaBI GATNNNNATC 4 cut(s) 909, 1131, 1590, 2100
BsaI GGTCTC 2 cut(s) 1309, 2649
BsaJI CCNNGG 3 cut(s) 826, 1258, 1666
BsaWI WCCGGW 1 cut(s) 49
Bsc4I CCNNNNNNNGG 7 cut(s) 49, 141, 1438, 1439, 1660, 2116, 2260
Bse118I RCCGGY 2 cut(s) 206, 2346
Bse3DI GCAATG 9 cut(s) 78, 1221, 1337, 1399, 1480, 2033, 2415, 2437, 2656
Bse8I GATNNNNATC 4 cut(s) 909, 1131, 1590, 2100
BseAI TCCGGA 1 cut(s) 49
BseBI CCWGG 2 cut(s) 635, 1463
BseCI ATCGAT 1 cut(s) 597
BseDI CCNNGG 3 cut(s) 826, 1258, 1666
BseGI GGATG 4 cut(s) 1703, 1987, 2054, 2319
BseJI GATNNNNATC 4 cut(s) 909, 1131, 1590, 2100
BseLI CCNNNNNNNGG 7 cut(s) 49, 141, 1438, 1439, 1660, 2116, 2260
BseMI GCAATG 9 cut(s) 78, 1221, 1337, 1399, 1480, 2033, 2415, 2437, 2656
BseMII CTCAG 3 cut(s) 35, 387, 1100
BseRI GAGGAG 3 cut(s) 40, 43, 1008
BseSI GKGCMC 1 cut(s) 997
BsgI GTGCAG 1 cut(s) 2490
BshFI GGCC 3 cut(s) 288, 384, 1183
BshNI GGYRCC 3 cut(s) 994, 1609, 2227
BshVI ATCGAT 1 cut(s) 597
BsiSI CCGG 6 cut(s) 50, 207, 999, 1450, 2347, 2620
BslFI GGGAC 4 cut(s) 784, 1415, 1455, 1466
BslI CCNNNNNNNGG 7 cut(s) 49, 141, 1438, 1439, 1660, 2116, 2260
BsmAI GTCTC 4 cut(s) 193, 1309, 2649, 2692
BsmFI GGGAC 4 cut(s) 784, 1415, 1455, 1466
BsmI GAATGC 1 cut(s) 331
BsnI GGCC 3 cut(s) 288, 384, 1183
Bso31I GGTCTC 2 cut(s) 1309, 2649
Bsp1286I GDGCHC 1 cut(s) 997
Bsp13I TCCGGA 1 cut(s) 49
Bsp1407I TGTACA 2 cut(s) 2187, 2340
Bsp143I GATC 9 cut(s) 526, 1126, 1318, 1458, 1686, 1819, 2002, 2290, 2401
BspACI CCGC 9 cut(s) 5, 245, 457, 946, 982, 1540, 1869, 1902, 2266
BspANI GGCC 3 cut(s) 288, 384, 1183
BspCNI CTCAG 3 cut(s) 36, 388, 1099
BspDI ATCGAT 1 cut(s) 597
BspEI TCCGGA 1 cut(s) 49
BspHI TCATGA 2 cut(s) 585, 1120
BspLI GGNNCC 4 cut(s) 323, 996, 1611, 2229
BspMAI CTGCAG 3 cut(s) 244, 1350, 2599
BspOI GCTAGC 1 cut(s) 1482
BspPI GGATC 3 cut(s) 1313, 1453, 1827
BspT107I GGYRCC 3 cut(s) 994, 1609, 2227
BspTNI GGTCTC 2 cut(s) 1309, 2649
BsrBI CCGCTC 2 cut(s) 459, 2266
BsrDI GCAATG 9 cut(s) 78, 1221, 1337, 1399, 1480, 2033, 2415, 2437, 2656
BsrFI RCCGGY 2 cut(s) 206, 2346
BsrGI TGTACA 2 cut(s) 2187, 2340
BssAI RCCGGY 2 cut(s) 206, 2346
BssECI CCNNGG 3 cut(s) 826, 1258, 1666
BssMI GATC 9 cut(s) 526, 1126, 1318, 1458, 1686, 1819, 2002, 2290, 2401
BssT1I CCWWGG 3 cut(s) 826, 1258, 1666
Bst2UI CCWGG 2 cut(s) 635, 1463
Bst4CI ACNGT 9 cut(s) 259, 851, 1059, 1375, 1381, 1423, 1429, 1655, 2555
Bst6I CTCTTC 8 cut(s) 51, 361, 426, 446, 1725, 1974, 2013, 2621
BstAUI TGTACA 2 cut(s) 2187, 2340
BstBAI YACGTR 1 cut(s) 2213
BstC8I GCNNGC 9 cut(s) 457, 572, 685, 720, 944, 1480, 1873, 1996, 2167
BstDEI CTNAG 5 cut(s) 44, 396, 656, 1086, 1469
BstEII GGTNACC 1 cut(s) 1701
BstF5I GGATG 4 cut(s) 1703, 1987, 2054, 2319
BstKTI GATC 9 cut(s) 529, 1129, 1321, 1461, 1689, 1822, 2005, 2293, 2404
BstMAI GTCTC 4 cut(s) 193, 1309, 2649, 2692
BstMBI GATC 9 cut(s) 526, 1126, 1318, 1458, 1686, 1819, 2002, 2290, 2401
BstMWI GCNNNNNNNGC 8 cut(s) 39, 89, 245, 390, 1049, 1479, 1856, 2256
BstNI CCWGG 2 cut(s) 635, 1463
BstNSI RCATGY 5 cut(s) 581, 946, 1392, 1893, 1998
BstPI GGTNACC 1 cut(s) 1701
BstSCI CCNGG 5 cut(s) 633, 997, 1449, 1461, 2619
BstSFI CTRYAG 3 cut(s) 240, 1346, 2595
BstSLI GKGCMC 1 cut(s) 997
BstV2I GAAGAC 3 cut(s) 419, 1109, 1557
BstX2I RGATCY 2 cut(s) 1126, 2290
BstYI RGATCY 2 cut(s) 1126, 2290
Bsu15I ATCGAT 1 cut(s) 597
BsuI GTATCC 1 cut(s) 751
BsuRI GGCC 3 cut(s) 288, 384, 1183
BsuTUI ATCGAT 1 cut(s) 597
BtgZI GCGATG 1 cut(s) 182
BtsCI GGATG 4 cut(s) 1703, 1987, 2054, 2319
BtsI GCAGTG 1 cut(s) 2502
BtsIMutI CAGTG 8 cut(s) 151, 856, 1419, 1953, 2169, 2222, 2261, 2502
Cac8I GCNNGC 9 cut(s) 457, 572, 685, 720, 944, 1480, 1873, 1996, 2167
CciI TCATGA 2 cut(s) 585, 1120
Cfr10I RCCGGY 2 cut(s) 206, 2346
Cfr13I GGNCC 5 cut(s) 350, 383, 631, 1663, 2147
ClaI ATCGAT 1 cut(s) 597
CseI GACGC 1 cut(s) 576
Csp6I GTAC 7 cut(s) 786, 1005, 1330, 1893, 2188, 2245, 2341
CviQI GTAC 7 cut(s) 786, 1005, 1330, 1893, 2188, 2245, 2341
DdeI CTNAG 5 cut(s) 44, 396, 656, 1086, 1469
DpnI GATC 9 cut(s) 528, 1128, 1320, 1460, 1688, 1821, 2004, 2292, 2403
DpnII GATC 9 cut(s) 526, 1126, 1318, 1458, 1686, 1819, 2002, 2290, 2401
DraI TTTAAA 1 cut(s) 1030
Eam1104I CTCTTC 8 cut(s) 51, 361, 426, 446, 1725, 1974, 2013, 2621
EarI CTCTTC 8 cut(s) 51, 361, 426, 446, 1725, 1974, 2013, 2621
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 3 cut(s) 826, 1258, 1666
Eco31I GGTCTC 2 cut(s) 1309, 2649
Eco47I GGWCC 4 cut(s) 350, 631, 1663, 2147
Eco57I CTGAAG 5 cut(s) 726, 1625, 1955, 2253, 2328
Eco91I GGTNACC 1 cut(s) 1701
EcoO109I RGGNCCY 1 cut(s) 383
EcoO65I GGTNACC 1 cut(s) 1701
EcoRII CCWGG 2 cut(s) 633, 1461
EcoT14I CCWWGG 3 cut(s) 826, 1258, 1666
EcoT22I ATGCAT 2 cut(s) 551, 2000
ErhI CCWWGG 3 cut(s) 826, 1258, 1666
FalI AAGNNNNNCTT 4 cut(s) 724, 756, 2321, 2353
FaqI GGGAC 4 cut(s) 784, 1415, 1455, 1466
FauI CCCGC 3 cut(s) 464, 939, 1876
FauNDI CATATG 2 cut(s) 1530, 2602
FblI GTMKAC 1 cut(s) 414
FokI GGATG 4 cut(s) 1710, 1994, 2041, 2306
FspBI CTAG 8 cut(s) 827, 888, 962, 1109, 1362, 1479, 2063, 2288
HaeIII GGCC 3 cut(s) 288, 384, 1183
HapII CCGG 6 cut(s) 50, 207, 999, 1450, 2347, 2620
HgaI GACGC 1 cut(s) 576
HincII GTYRAC 1 cut(s) 262
HindII GTYRAC 1 cut(s) 262
HindIII AAGCTT 3 cut(s) 986, 2087, 2516
HinfI GANTC 8 cut(s) 46, 369, 1082, 1132, 1235, 1534, 1898, 2636
HpaII CCGG 6 cut(s) 50, 207, 999, 1450, 2347, 2620
HphI GGTGA 5 cut(s) 962, 2027, 2556, 2635, 2684
Hpy166II GTNNAC 6 cut(s) 169, 262, 415, 1007, 1353, 2190
Hpy188I TCNGA 4 cut(s) 193, 223, 397, 1131
Hpy8I GTNNAC 6 cut(s) 169, 262, 415, 1007, 1353, 2190
Hpy99I CGWCG 1 cut(s) 1659
HpyAV CCTTC 6 cut(s) 130, 278, 396, 475, 1333, 2049
HpyCH4III ACNGT 9 cut(s) 259, 851, 1059, 1375, 1381, 1423, 1429, 1655, 2555
HpyCH4IV ACGT 3 cut(s) 1003, 1444, 2212
HpyF10VI GCNNNNNNNGC 8 cut(s) 39, 89, 245, 390, 1049, 1479, 1856, 2256
HpyF3I CTNAG 5 cut(s) 44, 396, 656, 1086, 1469
HpySE526I ACGT 3 cut(s) 1003, 1444, 2212
Kpn2I TCCGGA 1 cut(s) 49
Kzo9I GATC 9 cut(s) 526, 1126, 1318, 1458, 1686, 1819, 2002, 2290, 2401
LmnI GCTCC 6 cut(s) 30, 193, 309, 464, 1021, 2263
LweI GCATC 7 cut(s) 205, 226, 604, 704, 1159, 1868, 2054
MaeI CTAG 8 cut(s) 827, 888, 962, 1109, 1362, 1479, 2063, 2288
MaeII ACGT 3 cut(s) 1003, 1444, 2212
MalI GATC 9 cut(s) 528, 1128, 1320, 1460, 1688, 1821, 2004, 2292, 2403
MbiI CCGCTC 2 cut(s) 459, 2266
MboI GATC 9 cut(s) 526, 1126, 1318, 1458, 1686, 1819, 2002, 2290, 2401
MfeI CAATTG 1 cut(s) 431
MflI RGATCY 2 cut(s) 1126, 2290
MhlI GDGCHC 1 cut(s) 997
MluCI AATT 7 cut(s) 217, 431, 752, 974, 1242, 1912, 2410
MlyI GAGTC 2 cut(s) 55, 378
MmeI TCCRAC 2 cut(s) 246, 377
Mph1103I ATGCAT 2 cut(s) 551, 2000
MroI TCCGGA 1 cut(s) 49
MroXI GAANNNNTTC 1 cut(s) 2205
MseI TTAA 5 cut(s) 747, 1029, 1559, 1802, 2139
MslI CAYNNNNRTG 2 cut(s) 183, 1696
MspA1I CMGCKG 5 cut(s) 245, 1540, 1645, 1871, 2594
MspI CCGG 6 cut(s) 50, 207, 999, 1450, 2347, 2620
MspR9I CCNGG 5 cut(s) 635, 999, 1451, 1463, 2621
MunI CAATTG 1 cut(s) 431
Mva1269I GAATGC 1 cut(s) 331
MvaI CCWGG 2 cut(s) 635, 1463
MwoI GCNNNNNNNGC 8 cut(s) 39, 89, 245, 390, 1049, 1479, 1856, 2256
NciI CCSGG 3 cut(s) 999, 1451, 2621
NdeI CATATG 2 cut(s) 1530, 2602
NdeII GATC 9 cut(s) 526, 1126, 1318, 1458, 1686, 1819, 2002, 2290, 2401
NheI GCTAGC 1 cut(s) 1478
NlaIV GGNNCC 4 cut(s) 323, 996, 1611, 2229
NmuCI GTSAC 4 cut(s) 1423, 2079, 2555, 2672
NsiI ATGCAT 2 cut(s) 551, 2000
NspI RCATGY 5 cut(s) 581, 946, 1392, 1893, 1998
PaeI GCATGC 2 cut(s) 946, 1998
PagI TCATGA 2 cut(s) 585, 1120
PctI GAATGC 1 cut(s) 331
PdmI GAANNNNTTC 1 cut(s) 2205
PfeI GAWTC 6 cut(s) 1082, 1132, 1235, 1534, 1898, 2636
PflMI CCANNNNNTGG 1 cut(s) 2116
PleI GAGTC 2 cut(s) 54, 377
PpsI GAGTC 2 cut(s) 54, 377
Ppu21I YACGTR 1 cut(s) 2213
PshBI ATTAAT 1 cut(s) 1559
Psp6I CCWGG 2 cut(s) 633, 1461
PspEI GGTNACC 1 cut(s) 1701
PspGI CCWGG 2 cut(s) 633, 1461
PspN4I GGNNCC 4 cut(s) 323, 996, 1611, 2229
PspPI GGNCC 5 cut(s) 350, 383, 631, 1663, 2147
PsrI GAACNNNNNNTAC 2 cut(s) 778, 810
PstI CTGCAG 3 cut(s) 244, 1350, 2599
PsuI RGATCY 2 cut(s) 1126, 2290
PvuII CAGCTG 2 cut(s) 1645, 2594
RsaI GTAC 7 cut(s) 787, 1006, 1331, 1894, 2189, 2246, 2342
RsaNI GTAC 7 cut(s) 786, 1005, 1330, 1893, 2188, 2245, 2341
RseI CAYNNNNRTG 2 cut(s) 183, 1696
SaqAI TTAA 5 cut(s) 747, 1029, 1559, 1802, 2139
Sau3AI GATC 9 cut(s) 526, 1126, 1318, 1458, 1686, 1819, 2002, 2290, 2401
Sau96I GGNCC 5 cut(s) 350, 383, 631, 1663, 2147
SchI GAGTC 2 cut(s) 55, 378
ScrFI CCNGG 5 cut(s) 635, 999, 1451, 1463, 2621
SduI GDGCHC 1 cut(s) 997
SfaNI GCATC 7 cut(s) 205, 226, 604, 704, 1159, 1868, 2054
SfcI CTRYAG 3 cut(s) 240, 1346, 2595
SinI GGWCC 4 cut(s) 350, 631, 1663, 2147
SmiMI CAYNNNNRTG 2 cut(s) 183, 1696
SmlI CTYRAG 1 cut(s) 1958
SmoI CTYRAG 1 cut(s) 1958
SpeI ACTAGT 1 cut(s) 2062
SphI GCATGC 2 cut(s) 946, 1998
Sse9I AATT 7 cut(s) 217, 431, 752, 974, 1242, 1912, 2410
SsiI CCGC 9 cut(s) 5, 245, 457, 946, 982, 1540, 1869, 1902, 2266
SspI AATATT 2 cut(s) 1208, 1563
SspMI CTAG 8 cut(s) 827, 888, 962, 1109, 1362, 1479, 2063, 2288
StyD4I CCNGG 5 cut(s) 633, 997, 1449, 1461, 2619
StyI CCWWGG 3 cut(s) 826, 1258, 1666
TaaI ACNGT 9 cut(s) 259, 851, 1059, 1375, 1381, 1423, 1429, 1655, 2555
TaiI ACGT 3 cut(s) 1006, 1447, 2215
TaqI TCGA 5 cut(s) 14, 597, 1021, 1248, 1515
TasI AATT 7 cut(s) 217, 431, 752, 974, 1242, 1912, 2410
TatI WGTACW 3 cut(s) 785, 2187, 2340
TauI GCSGC 2 cut(s) 248, 2269
TfiI GAWTC 6 cut(s) 1082, 1132, 1235, 1534, 1898, 2636
Tru1I TTAA 5 cut(s) 747, 1029, 1559, 1802, 2139
Tru9I TTAA 5 cut(s) 747, 1029, 1559, 1802, 2139
TscAI CASTG 8 cut(s) 158, 856, 1426, 1953, 2176, 2229, 2261, 2509
TseFI GTSAC 4 cut(s) 1423, 2079, 2555, 2672
Tsp45I GTSAC 4 cut(s) 1423, 2079, 2555, 2672
TspRI CASTG 8 cut(s) 158, 856, 1426, 1953, 2176, 2229, 2261, 2509
Van91I CCANNNNNTGG 1 cut(s) 2116
VpaK11BI GGWCC 4 cut(s) 350, 631, 1663, 2147
VspI ATTAAT 1 cut(s) 1559
XceI RCATGY 5 cut(s) 581, 946, 1392, 1893, 1998
XmaJI CCTAGG 1 cut(s) 826
XmiI GTMKAC 1 cut(s) 414
XmnI GAANNNNTTC 1 cut(s) 2205
XspI CTAG 8 cut(s) 827, 888, 962, 1109, 1362, 1479, 2063, 2288
Zsp2I ATGCAT 2 cut(s) 551, 2000
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.