AT2G45720

armadillo beta-catenin repeat family protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
18833086 .. 18836374
3289 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G45720.2

Sequence Viewer

Length: 1662 bp
ATGGTGGAGGAGAAAACGGGAAACGTGACTCTACTTGATCAAACAGTTGAAGATTTGTTATTACAGGCACAAGAGCTTGTACCGATCGCTTTGTCCAAAGCAAGAACAGTGAAAGGTTTCTCAAGCAGATGGAGAGTGATCATTTCAAGATTAGAGAAGATACCGACATGTTTATCGGATTTGTCTAGCCATCCTTGCTTCTCTAAGCACACTCTATGCAAAGAGCAACTTCAAGCAGTCTTAGAAACTTTGAAAGAAACCATCGAGCTCGCGAATGTTTGCGTAAGTGAGAAGCAAGAGGGGAAATTGAAGATGCAGAGTGATCTAGATTCTCTATCTGCGAAGATTGATCTTAGCTTGAAAGATTGTGGATTGCTAATGAAAACAGGTGTTCTTGGAGAAGTTACGAAACCTTTATCTTCTTCGACTCAAGACTTGGAAACGTTCAGCGTTAGAGAATTGCTTGCTCGGCTTCAGATAGGTCACTTGGAGTCTAAACGCAAAGCGCTTGAGCAGCTCGTCGAGGTAATGAAAGAAGACGAAAAGGCGGTTATAACCGCTCTAGGCCGTACCAACGTCGCGTCTTTGGTGCAGCTTTTGACGGCTACCTCGCCTAGCGTAAGGGAAAACGCGGTGACTGTGATCTGCTCTCTAGCGGAATCAGGCGGATGCGAAAACTGGCTTATCTCTGAGAACGCATTGCCTTCATTGATAAGGCTACTAGAATCAGGAAGTATTGTTGCTAAGGAGAAAGCGGTTATTTCGTTGCAGAGAATGTCTATTTCATCAGAGACATCGCGTTCAATTGTTGGTCACGGCGGGGTTGGTCCGTTGATCGAGATTTGCAAAACAGGGGACTCTGTTTCTCAATCCGCTTCTGCTTGTACTTTGAAGAACATTTCCGCTGTGCCTGAAGTAAGACAGAATCTAGCGGAAGAAGGAATCGTGAAAGTGATGATTAACATACTTAACTGCGGAATCCTATTGGGATCTAAAGAATACGCAGCGGAATGTCTTCAGAATCTCACTTCAAGCAACGAAACTCTTCGAAGATCGGTTATATCAGAGAACGGAATACAAACTCTGCTCGCTTACTTAGACGGTCCTCTTCCTCAAGAATCAGGAGTTGCAGCAATTAGGAATCTTGTTGGCTCTGTTTCTGTAGAGACTTACTTCAAGATAATCCCAAGTTTAGTCCATGTTCTTAAATCAGGTTCAATCGGAGCTCAGCAAGCGGCTGCGTCAACTATTTGCAGGATTGCTACCTCAAATGAGACAAAGAGAATGATCGGTGAATCAGGTTGTATCCCGTTGTTGATAAGAATGTTGGAGGCGAAAGCGAGTGGAGCTAGAGAGGTTGCTGCTCAAGCTATAGCGAGTCTGGTTACGGTTCCAAGGAATTGCAGAGAAGTGAAGAGAGATGAGAAAAGTGTGACGAGTCTTGTGATGTTGCTTGAGCCGAGTCCGGGTAACTCGGCAAAGAAGTATGCGGTTTCGGGTTTGGCGGCTTTGTGTTCGAGCAGGAAGTGTAAGAAGCTGATGGTCTCACATGGAGCTGTTGGTTATTTGAAGAAGTTGTCGGAGTTGGAGGTTCCTGGTTCGAAGAAGCTTCTTGAAAGGATTGAGAAAGGGAAATTAAAAAGTTTCTTTAGTAGGAAGTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

553

Amino Acids

59.52

Weight (kDa)

8.8

Isoelectric Point (pI)

41.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7032 PF23005 22 - 131 2.6e-36 Domain of unknown function (DUF7032)
ARM_ARMC5 PF24768 193 - 368 1.8e-09 ARMC5
ARM_ARMC5 PF24768 261 - 448 1.4e-09 ARMC5
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 554
AccBSI CCGCTC 1 cut(s) 560
AccII CGCG 4 cut(s) 272, 581, 632, 799
AclI AACGTT 1 cut(s) 443
AclWI GGATC 1 cut(s) 997
AcuI CTGAAG 3 cut(s) 458, 933, 1001
AfaI GTAC 3 cut(s) 81, 571, 886
AfeI AGCGCT 1 cut(s) 507
AfiI CCNNNNNNNGG 1 cut(s) 1466
AflIII ACRYGT 1 cut(s) 167
AjnI CCWGG 1 cut(s) 1594
Alw21I GWGCWC 2 cut(s) 270, 1228
Alw26I GTCTC 4 cut(s) 785, 1160, 1268, 1549
AlwI GGATC 1 cut(s) 997
Aor51HI AGCGCT 1 cut(s) 507
AoxI GGCC 1 cut(s) 565
ApeKI GCWGC 6 cut(s) 514, 592, 1004, 1130, 1238, 1361
Asp700I GAANNNNTTC 3 cut(s) 116, 1014, 1044
AspLEI GCGC 1 cut(s) 508
AspS9I GGNCC 2 cut(s) 827, 1103
AsuC2I CCSGG 1 cut(s) 1467
AsuHPI GGTGA 2 cut(s) 646, 1304
AsuII TTCGAA 2 cut(s) 1048, 1601
AvaII GGWCC 2 cut(s) 827, 1103
BanII GRGCYC 2 cut(s) 270, 1228
BbsI GAAGAC 2 cut(s) 543, 1007
Bbv12I GWGCWC 2 cut(s) 270, 1228
BbvI GCAGC 6 cut(s) 526, 604, 1016, 1142, 1225, 1348
BccI CCATC 4 cut(s) 123, 198, 269, 1534
BceAI ACGGC 3 cut(s) 552, 618, 832
BciT130I CCWGG 1 cut(s) 1596
BciVI GTATCC 1 cut(s) 1316
BclI TGATCA 2 cut(s) 37, 138
BcnI CCSGG 1 cut(s) 1467
BcoDI GTCTC 4 cut(s) 785, 1160, 1268, 1549
BfaI CTAG 8 cut(s) 186, 326, 563, 615, 653, 722, 929, 1350
BfmI CTRYAG 2 cut(s) 1161, 1371
BfoI RGCGCY 1 cut(s) 509
BfuI GTATCC 1 cut(s) 1316
BisI GCNGC 8 cut(s) 515, 593, 1005, 1131, 1236, 1239, 1362, 1506
BlpI GCTNAGC 1 cut(s) 1227
BlsI GCNGC 8 cut(s) 516, 594, 1006, 1132, 1237, 1240, 1363, 1507
Bme1390I CCNGG 2 cut(s) 1467, 1596
Bme18I GGWCC 2 cut(s) 827, 1103
BmgT120I GGNCC 2 cut(s) 827, 1103
BmiI GGNNCC 2 cut(s) 1392, 1593
BmrFI CCNGG 2 cut(s) 1467, 1596
BmsI GCATC 2 cut(s) 303, 659
BpiI GAAGAC 2 cut(s) 543, 1007
Bpu10I CCTNAGC 1 cut(s) 744
Bpu1102I GCTNAGC 1 cut(s) 1227
Bpu14I TTCGAA 2 cut(s) 1048, 1601
BpuEI CTTGAG 6 cut(s) 106, 414, 530, 1098, 1350, 1475
BpuMI CCSGG 1 cut(s) 1467
BsaI GGTCTC 1 cut(s) 1549
BsaJI CCNNGG 1 cut(s) 1394
Bsc4I CCNNNNNNNGG 1 cut(s) 1466
Bse1I ACTGG 1 cut(s) 683
Bse3DI GCAATG 1 cut(s) 698
BseBI CCWGG 1 cut(s) 1596
BseDI CCNNGG 1 cut(s) 1394
BseGI GGATG 2 cut(s) 190, 674
BseLI CCNNNNNNNGG 1 cut(s) 1466
BseMI GCAATG 1 cut(s) 698
BseMII CTCAG 2 cut(s) 681, 1241
BseNI ACTGG 1 cut(s) 683
BseRI GAGGAG 1 cut(s) 23
BseXI GCAGC 6 cut(s) 526, 604, 1016, 1142, 1225, 1348
BsgI GTGCAG 1 cut(s) 611
Bsh1236I CGCG 4 cut(s) 272, 581, 632, 799
Bsh1285I CGRYCG 1 cut(s) 87
BshFI GGCC 1 cut(s) 567
BsiEI CGRYCG 1 cut(s) 87
BsiHKAI GWGCWC 2 cut(s) 270, 1228
BsiSI CCGG 1 cut(s) 1466
BslFI GGGAC 1 cut(s) 869
BslI CCNNNNNNNGG 1 cut(s) 1466
BsmAI GTCTC 4 cut(s) 785, 1160, 1268, 1549
BsmFI GGGAC 1 cut(s) 869
BsnI GGCC 1 cut(s) 567
Bso31I GGTCTC 1 cut(s) 1549
Bsp119I TTCGAA 2 cut(s) 1048, 1601
Bsp1286I GDGCHC 2 cut(s) 270, 1228
Bsp1720I GCTNAGC 1 cut(s) 1227
Bsp68I TCGCGA 1 cut(s) 272
BspANI GGCC 1 cut(s) 567
BspCNI CTCAG 2 cut(s) 682, 1240
BspFNI CGCG 4 cut(s) 272, 581, 632, 799
BspLI GGNNCC 2 cut(s) 1392, 1593
BspPI GGATC 1 cut(s) 997
BspT104I TTCGAA 2 cut(s) 1048, 1601
BspTNI GGTCTC 1 cut(s) 1549
BsrBI CCGCTC 1 cut(s) 560
BsrDI GCAATG 1 cut(s) 698
BsrI ACTGG 1 cut(s) 683
BssECI CCNNGG 1 cut(s) 1394
BssT1I CCWWGG 1 cut(s) 1394
Bst2UI CCWGG 1 cut(s) 1596
Bst4CI ACNGT 5 cut(s) 46, 109, 640, 1103, 1390
Bst6I CTCTTC 3 cut(s) 1050, 1113, 1409
BstBI TTCGAA 2 cut(s) 1048, 1601
BstC8I GCNNGC 4 cut(s) 270, 465, 1089, 1233
BstDEI CTNAG 7 cut(s) 204, 241, 353, 690, 744, 1096, 1227
BstF5I GGATG 2 cut(s) 190, 674
BstFNI CGCG 4 cut(s) 272, 581, 632, 799
BstH2I RGCGCY 1 cut(s) 509
BstHHI GCGC 1 cut(s) 508
BstMAI GTCTC 4 cut(s) 785, 1160, 1268, 1549
BstMCI CGRYCG 1 cut(s) 87
BstMWI GCNNNNNNNGC 6 cut(s) 195, 469, 514, 1232, 1346, 1367
BstNI CCWGG 1 cut(s) 1596
BstNSI RCATGY 1 cut(s) 171
BstSCI CCNGG 2 cut(s) 1465, 1594
BstSFI CTRYAG 2 cut(s) 1161, 1371
BstUI CGCG 4 cut(s) 272, 581, 632, 799
BstV1I GCAGC 6 cut(s) 526, 604, 1016, 1142, 1225, 1348
BstV2I GAAGAC 2 cut(s) 543, 1007
BstX2I RGATCY 1 cut(s) 989
BstYI RGATCY 1 cut(s) 989
BsuI GTATCC 1 cut(s) 1316
BsuRI GGCC 1 cut(s) 567
BtgZI GCGATG 1 cut(s) 780
BtsCI GGATG 2 cut(s) 190, 674
BtsIMutI CAGTG 1 cut(s) 114
BtuMI TCGCGA 1 cut(s) 272
Cac8I GCNNGC 4 cut(s) 270, 465, 1089, 1233
CfoI GCGC 1 cut(s) 508
Cfr13I GGNCC 2 cut(s) 827, 1103
CseI GACGC 2 cut(s) 570, 1230
Csp6I GTAC 3 cut(s) 80, 570, 885
CviAII CATG 3 cut(s) 168, 1199, 1550
CviQI GTAC 3 cut(s) 80, 570, 885
DdeI CTNAG 7 cut(s) 204, 241, 353, 690, 744, 1096, 1227
Eam1104I CTCTTC 3 cut(s) 1050, 1113, 1409
EarI CTCTTC 3 cut(s) 1050, 1113, 1409
EciI GGCGGA 1 cut(s) 681
Ecl136II GAGCTC 2 cut(s) 268, 1226
Eco130I CCWWGG 1 cut(s) 1394
Eco24I GRGCYC 2 cut(s) 270, 1228
Eco31I GGTCTC 1 cut(s) 1549
Eco47I GGWCC 2 cut(s) 827, 1103
Eco47III AGCGCT 1 cut(s) 507
Eco53kI GAGCTC 2 cut(s) 268, 1226
Eco57I CTGAAG 3 cut(s) 458, 933, 1001
EcoICRI GAGCTC 2 cut(s) 268, 1226
EcoRII CCWGG 1 cut(s) 1594
EcoT14I CCWWGG 1 cut(s) 1394
EcoT38I GRGCYC 2 cut(s) 270, 1228
ErhI CCWWGG 1 cut(s) 1394
FaeI CATG 3 cut(s) 171, 1202, 1553
FaiI YATR 9 cut(s) 169, 217, 554, 965, 1061, 1200, 1373, 1488, 1551
FalI AAGNNNNNCTT 2 cut(s) 213, 245
FaqI GGGAC 1 cut(s) 869
FatI CATG 3 cut(s) 167, 1198, 1549
FauI CCCGC 1 cut(s) 812
FbaI TGATCA 2 cut(s) 37, 138
Fnu4HI GCNGC 8 cut(s) 515, 593, 1005, 1131, 1236, 1239, 1362, 1506
FokI GGATG 2 cut(s) 177, 681
FriOI GRGCYC 2 cut(s) 270, 1228
Fsp4HI GCNGC 8 cut(s) 515, 593, 1005, 1131, 1236, 1239, 1362, 1506
FspBI CTAG 8 cut(s) 186, 326, 563, 615, 653, 722, 929, 1350
GlaI GCGC 1 cut(s) 507
GluI GCNGC 8 cut(s) 515, 593, 1005, 1131, 1236, 1239, 1362, 1506
HaeII RGCGCY 1 cut(s) 509
HaeIII GGCC 1 cut(s) 567
HapII CCGG 1 cut(s) 1466
HgaI GACGC 2 cut(s) 570, 1230
HhaI GCGC 1 cut(s) 508
Hin1II CATG 3 cut(s) 171, 1202, 1553
Hin6I GCGC 1 cut(s) 506
HinP1I GCGC 1 cut(s) 506
HincII GTYRAC 1 cut(s) 1245
HindII GTYRAC 1 cut(s) 1245
HindIII AAGCTT 1 cut(s) 1607
HpaII CCGG 1 cut(s) 1466
HphI GGTGA 2 cut(s) 646, 1304
Hpy166II GTNNAC 1 cut(s) 1245
Hpy188I TCNGA 8 cut(s) 178, 477, 691, 790, 1020, 1066, 1223, 1582
Hpy8I GTNNAC 1 cut(s) 1245
Hpy99I CGWCG 2 cut(s) 524, 581
HpyAV CCTTC 2 cut(s) 714, 932
HpyCH4III ACNGT 5 cut(s) 46, 109, 640, 1103, 1390
HpyCH4IV ACGT 3 cut(s) 24, 443, 576
HpyCH4V TGCA 8 cut(s) 219, 316, 592, 769, 846, 1130, 1254, 1404
HpyF10VI GCNNNNNNNGC 6 cut(s) 195, 469, 514, 1232, 1346, 1367
HpyF3I CTNAG 7 cut(s) 204, 241, 353, 690, 744, 1096, 1227
HpySE526I ACGT 3 cut(s) 24, 443, 576
Hsp92II CATG 3 cut(s) 171, 1202, 1553
HspAI GCGC 1 cut(s) 506
Ksp22I TGATCA 2 cut(s) 37, 138
LmnI GCTCC 3 cut(s) 1223, 1346, 1553
Lsp1109I GCAGC 6 cut(s) 526, 604, 1016, 1142, 1225, 1348
LweI GCATC 2 cut(s) 303, 659
MaeI CTAG 8 cut(s) 186, 326, 563, 615, 653, 722, 929, 1350
MaeII ACGT 3 cut(s) 24, 443, 576
MaeIII GTNAC 8 cut(s) 25, 403, 482, 634, 812, 1384, 1432, 1469
MbiI CCGCTC 1 cut(s) 560
MfeI CAATTG 1 cut(s) 804
MflI RGATCY 1 cut(s) 989
MhlI GDGCHC 2 cut(s) 270, 1228
MluCI AATT 6 cut(s) 305, 458, 804, 1134, 1399, 1634
MlyI GAGTC 7 cut(s) 22, 421, 500, 851, 1387, 1447, 1471
MmeI TCCRAC 3 cut(s) 1308, 1560, 1566
MnlI CCTC 9 cut(s) 292, 517, 619, 1116, 1122, 1276, 1324, 1348, 1582
MroXI GAANNNNTTC 3 cut(s) 116, 1014, 1044
MseI TTAA 4 cut(s) 960, 969, 1206, 1637
MspA1I CMGCKG 2 cut(s) 905, 1007
MspI CCGG 1 cut(s) 1466
MspR9I CCNGG 2 cut(s) 1467, 1596
MunI CAATTG 1 cut(s) 804
MvaI CCWGG 1 cut(s) 1596
MvnI CGCG 4 cut(s) 272, 581, 632, 799
MwoI GCNNNNNNNGC 6 cut(s) 195, 469, 514, 1232, 1346, 1367
NciI CCSGG 1 cut(s) 1467
NlaIII CATG 3 cut(s) 171, 1202, 1553
NlaIV GGNNCC 2 cut(s) 1392, 1593
NmeAIII GCCGAG 3 cut(s) 448, 1454, 1485
NmuCI GTSAC 5 cut(s) 25, 482, 634, 812, 1432
NruI TCGCGA 1 cut(s) 272
NspI RCATGY 1 cut(s) 171
NspV TTCGAA 2 cut(s) 1048, 1601
PciI ACATGT 1 cut(s) 167
PdmI GAANNNNTTC 3 cut(s) 116, 1014, 1044
PkrI GCNGC 8 cut(s) 516, 594, 1006, 1132, 1237, 1240, 1363, 1507
Ple19I CGATCG 1 cut(s) 87
PleI GAGTC 7 cut(s) 22, 421, 499, 851, 1386, 1446, 1470
PpsI GAGTC 7 cut(s) 22, 421, 499, 851, 1386, 1446, 1470
PscI ACATGT 1 cut(s) 167
PsiI TTATAA 1 cut(s) 554
Psp124BI GAGCTC 2 cut(s) 270, 1228
Psp1406I AACGTT 1 cut(s) 443
Psp6I CCWGG 1 cut(s) 1594
PspGI CCWGG 1 cut(s) 1594
PspN4I GGNNCC 2 cut(s) 1392, 1593
PspPI GGNCC 2 cut(s) 827, 1103
PsuI RGATCY 1 cut(s) 989
PvuI CGATCG 1 cut(s) 87
RruI TCGCGA 1 cut(s) 272
RsaI GTAC 3 cut(s) 81, 571, 886
RsaNI GTAC 3 cut(s) 80, 570, 885
SacI GAGCTC 2 cut(s) 270, 1228
SaqAI TTAA 4 cut(s) 960, 969, 1206, 1637
SatI GCNGC 8 cut(s) 515, 593, 1005, 1131, 1236, 1239, 1362, 1506
Sau96I GGNCC 2 cut(s) 827, 1103
SchI GAGTC 7 cut(s) 22, 421, 500, 851, 1387, 1447, 1471
ScrFI CCNGG 2 cut(s) 1467, 1596
SduI GDGCHC 2 cut(s) 270, 1228
SfaNI GCATC 2 cut(s) 303, 659
SfcI CTRYAG 2 cut(s) 1161, 1371
SfuI TTCGAA 2 cut(s) 1048, 1601
SinI GGWCC 2 cut(s) 827, 1103
SmlI CTYRAG 6 cut(s) 121, 429, 509, 1113, 1365, 1454
SmoI CTYRAG 6 cut(s) 121, 429, 509, 1113, 1365, 1454
Sse9I AATT 6 cut(s) 305, 458, 804, 1134, 1399, 1634
SspMI CTAG 8 cut(s) 186, 326, 563, 615, 653, 722, 929, 1350
SstI GAGCTC 2 cut(s) 270, 1228
StyD4I CCNGG 2 cut(s) 1465, 1594
StyI CCWWGG 1 cut(s) 1394
TaaI ACNGT 5 cut(s) 46, 109, 640, 1103, 1390
TaiI ACGT 3 cut(s) 27, 446, 579
TaqI TCGA 7 cut(s) 264, 425, 522, 837, 1048, 1517, 1601
TasI AATT 6 cut(s) 305, 458, 804, 1134, 1399, 1634
TatI WGTACW 1 cut(s) 884
TauI GCSGC 2 cut(s) 1238, 1508
Tru1I TTAA 4 cut(s) 960, 969, 1206, 1637
Tru9I TTAA 4 cut(s) 960, 969, 1206, 1637
TscAI CASTG 1 cut(s) 114
TseFI GTSAC 5 cut(s) 25, 482, 634, 812, 1432
TseI GCWGC 6 cut(s) 514, 592, 1004, 1130, 1238, 1361
Tsp45I GTSAC 5 cut(s) 25, 482, 634, 812, 1432
TspDTI ATGAA 4 cut(s) 395, 545, 696, 774
TspGWI ACGGA 2 cut(s) 819, 1086
TspRI CASTG 1 cut(s) 114
VpaK11BI GGWCC 2 cut(s) 827, 1103
XbaI TCTAGA 1 cut(s) 325
XceI RCATGY 1 cut(s) 171
XmnI GAANNNNTTC 3 cut(s) 116, 1014, 1044
XspI CTAG 8 cut(s) 186, 326, 563, 615, 653, 722, 929, 1350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.