beta-amylase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G45880 |
| fragaria_vesca | FvH4_7g14210 FvH4_7g14210 FvH4_7g14210 |
| malus_domestica | MD01G1059300.v1.1 MD07G1138200.v1.1 |
| prunus_persica | Prupe.2G169900_v2.0.a1 Prupe.2G169900_v2.0.a1 |
| pyrus_communis | pycom07g13560 |
| rosa_chinensis | RchiOBHm_Chr1g0355141 |
| rosa_laevigata | RLG00000028174 |
| rosa_multiflora | Rmu_sc0003115.1_g000036 Rmu_sc0004488.1_g000006 |
| rosa_roxburghii | Rroxscaffold_4G00300640 |
| rosa_rugosa | Rorug01G0245400 Rorug01G0245500 Rorug01G0245600 |
| rosa_samantha | Rh1AG257700 Rh1BG227200 Rh1CG241300 Rh1DG254900 |
| rosa_wichuraiana | Rw1G022740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 309, 1887 |
| AatII | GACGTC | 1 cut(s) | 1602 |
| Acc36I | ACCTGC | 2 cut(s) | 443, 1798 |
| Acc65I | GGTACC | 1 cut(s) | 1272 |
| AccB1I | GGYRCC | 3 cut(s) | 1272, 1383, 1712 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1316 |
| AccBSI | CCGCTC | 2 cut(s) | 578, 2008 |
| AccI | GTMKAC | 2 cut(s) | 211, 1960 |
| AccII | CGCG | 2 cut(s) | 347, 948 |
| AccIII | TCCGGA | 2 cut(s) | 1063, 1733 |
| AclWI | GGATC | 1 cut(s) | 1916 |
| AcsI | RAATTY | 2 cut(s) | 687, 2000 |
| AcuI | CTGAAG | 1 cut(s) | 105 |
| AcyI | GRCGYC | 1 cut(s) | 1599 |
| AfaI | GTAC | 5 cut(s) | 1169, 1274, 1508, 1613, 1837 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 191, 259, 431, 1117, 1316, 1363, 1393 |
| AflII | CTTAAG | 2 cut(s) | 959, 1700 |
| AgeI | ACCGGT | 2 cut(s) | 1445, 1840 |
| AgsI | TTSAA | 3 cut(s) | 221, 835, 1241 |
| AhlI | ACTAGT | 2 cut(s) | 32, 1558 |
| AjnI | CCWGG | 3 cut(s) | 184, 900, 1309 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 776, 808 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 360, 382, 392, 414 |
| Alw26I | GTCTC | 3 cut(s) | 84, 99, 1553 |
| AlwI | GGATC | 1 cut(s) | 1916 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1575 |
| Ama87I | CYCGRG | 4 cut(s) | 692, 1398, 1660, 1848 |
| Aor13HI | TCCGGA | 2 cut(s) | 1063, 1733 |
| AoxI | GGCC | 3 cut(s) | 1252, 1402, 1477 |
| ApeKI | GCWGC | 6 cut(s) | 116, 928, 1367, 1575, 1583, 1820 |
| ApoI | RAATTY | 2 cut(s) | 687, 2000 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1531, 1563 |
| AsiGI | ACCGGT | 2 cut(s) | 1445, 1840 |
| Asp718I | GGTACC | 1 cut(s) | 1272 |
| AspLEI | GCGC | 1 cut(s) | 252 |
| AspS9I | GGNCC | 3 cut(s) | 943, 1253, 1403 |
| AsuHPI | GGTGA | 4 cut(s) | 483, 576, 1019, 1478 |
| AvaI | CYCGRG | 4 cut(s) | 692, 1398, 1660, 1848 |
| AvaII | GGWCC | 1 cut(s) | 943 |
| AxyI | CCTNAGG | 1 cut(s) | 1791 |
| BaeGI | GKGCMC | 2 cut(s) | 182, 1386 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1827, 1860 |
| BanI | GGYRCC | 3 cut(s) | 1272, 1383, 1712 |
| BanII | GRGCYC | 1 cut(s) | 1399 |
| BbsI | GAAGAC | 2 cut(s) | 1099, 1555 |
| BbvCI | CCTCAGC | 1 cut(s) | 642 |
| BbvI | GCAGC | 6 cut(s) | 128, 940, 1379, 1562, 1595, 1807 |
| BceAI | ACGGC | 1 cut(s) | 537 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 29 |
| BciT130I | CCWGG | 3 cut(s) | 186, 902, 1311 |
| BciVI | GTATCC | 2 cut(s) | 270, 1741 |
| BcoDI | GTCTC | 3 cut(s) | 84, 99, 1553 |
| BcuI | ACTAGT | 2 cut(s) | 32, 1558 |
| BfaI | CTAG | 5 cut(s) | 33, 281, 1214, 1250, 1559 |
| BfmI | CTRYAG | 1 cut(s) | 1954 |
| BfoI | RGCGCY | 1 cut(s) | 253 |
| BfrI | CTTAAG | 2 cut(s) | 959, 1700 |
| BfuAI | ACCTGC | 2 cut(s) | 443, 1798 |
| BfuI | GTATCC | 2 cut(s) | 270, 1741 |
| BlpI | GCTNAGC | 1 cut(s) | 1635 |
| Bme1390I | CCNGG | 3 cut(s) | 186, 902, 1311 |
| Bme18I | GGWCC | 1 cut(s) | 943 |
| BmeT110I | CYCGRG | 4 cut(s) | 692, 1398, 1660, 1848 |
| BmgT120I | GGNCC | 3 cut(s) | 943, 1253, 1403 |
| BmiI | GGNNCC | 6 cut(s) | 1255, 1274, 1385, 1420, 1444, 1714 |
| BmrFI | CCNGG | 3 cut(s) | 186, 902, 1311 |
| BmrI | ACTGGG | 1 cut(s) | 527 |
| BmsI | GCATC | 3 cut(s) | 485, 1029, 1700 |
| BmuI | ACTGGG | 1 cut(s) | 527 |
| BpiI | GAAGAC | 2 cut(s) | 1099, 1555 |
| BpmI | CTGGAG | 1 cut(s) | 597 |
| Bpu10I | CCTNAGC | 1 cut(s) | 642 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1635 |
| BpuEI | CTTGAG | 1 cut(s) | 1181 |
| BsaBI | GATNNNNATC | 1 cut(s) | 954 |
| BsaHI | GRCGYC | 1 cut(s) | 1599 |
| BsaI | GGTCTC | 1 cut(s) | 84 |
| BsaJI | CCNNGG | 2 cut(s) | 185, 900 |
| BsaWI | WCCGGW | 5 cut(s) | 745, 1063, 1445, 1733, 1840 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 478, 508, 562, 592, 987, 1017, 1403, 1433 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 191, 259, 431, 1117, 1316, 1363, 1393 |
| Bse118I | RCCGGY | 3 cut(s) | 1415, 1445, 1840 |
| Bse1I | ACTGG | 5 cut(s) | 433, 533, 624, 922, 1610 |
| Bse21I | CCTNAGG | 1 cut(s) | 1791 |
| Bse3DI | GCAATG | 3 cut(s) | 471, 1006, 1578 |
| Bse8I | GATNNNNATC | 1 cut(s) | 954 |
| BseAI | TCCGGA | 2 cut(s) | 1063, 1733 |
| BseBI | CCWGG | 3 cut(s) | 186, 902, 1311 |
| BseDI | CCNNGG | 2 cut(s) | 185, 900 |
| BseGI | GGATG | 6 cut(s) | 49, 73, 374, 401, 1020, 1225 |
| BseJI | GATNNNNATC | 1 cut(s) | 954 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 191, 259, 431, 1117, 1316, 1363, 1393 |
| BseMI | GCAATG | 3 cut(s) | 471, 1006, 1578 |
| BseNI | ACTGG | 5 cut(s) | 433, 533, 624, 922, 1610 |
| BseRI | GAGGAG | 1 cut(s) | 207 |
| BseSI | GKGCMC | 2 cut(s) | 182, 1386 |
| BseXI | GCAGC | 6 cut(s) | 128, 940, 1379, 1562, 1595, 1807 |
| BseYI | CCCAGC | 1 cut(s) | 1969 |
| BsgI | GTGCAG | 1 cut(s) | 1140 |
| Bsh1236I | CGCG | 2 cut(s) | 347, 948 |
| BshFI | GGCC | 3 cut(s) | 1254, 1404, 1479 |
| BshNI | GGYRCC | 3 cut(s) | 1272, 1383, 1712 |
| BshTI | ACCGGT | 2 cut(s) | 1445, 1840 |
| BsiHKCI | CYCGRG | 4 cut(s) | 692, 1398, 1660, 1848 |
| BsiSI | CCGG | 6 cut(s) | 746, 1064, 1416, 1446, 1734, 1841 |
| BslFI | GGGAC | 4 cut(s) | 430, 1269, 1841, 1952 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 191, 259, 431, 1117, 1316, 1363, 1393 |
| BsmAI | GTCTC | 3 cut(s) | 84, 99, 1553 |
| BsmFI | GGGAC | 4 cut(s) | 430, 1269, 1841, 1952 |
| BsmI | GAATGC | 1 cut(s) | 1112 |
| BsnI | GGCC | 3 cut(s) | 1254, 1404, 1479 |
| Bso31I | GGTCTC | 1 cut(s) | 84 |
| BsoBI | CYCGRG | 4 cut(s) | 692, 1398, 1660, 1848 |
| Bsp1286I | GDGCHC | 3 cut(s) | 182, 1386, 1399 |
| Bsp13I | TCCGGA | 2 cut(s) | 1063, 1733 |
| Bsp143I | GATC | 4 cut(s) | 169, 799, 949, 1921 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1635 |
| BspANI | GGCC | 3 cut(s) | 1254, 1404, 1479 |
| BspEI | TCCGGA | 2 cut(s) | 1063, 1733 |
| BspFNI | CGCG | 2 cut(s) | 347, 948 |
| BspHI | TCATGA | 1 cut(s) | 985 |
| BspLI | GGNNCC | 6 cut(s) | 1255, 1274, 1385, 1420, 1444, 1714 |
| BspMI | ACCTGC | 2 cut(s) | 443, 1798 |
| BspPI | GGATC | 1 cut(s) | 1916 |
| BspQI | GCTCTTC | 1 cut(s) | 1346 |
| BspT107I | GGYRCC | 3 cut(s) | 1272, 1383, 1712 |
| BspTI | CTTAAG | 2 cut(s) | 959, 1700 |
| BspTNI | GGTCTC | 1 cut(s) | 84 |
| BsrBI | CCGCTC | 2 cut(s) | 578, 2008 |
| BsrDI | GCAATG | 3 cut(s) | 471, 1006, 1578 |
| BsrFI | RCCGGY | 3 cut(s) | 1415, 1445, 1840 |
| BsrI | ACTGG | 5 cut(s) | 433, 533, 624, 922, 1610 |
| BssAI | RCCGGY | 3 cut(s) | 1415, 1445, 1840 |
| BssECI | CCNNGG | 2 cut(s) | 185, 900 |
| BssMI | GATC | 4 cut(s) | 169, 799, 949, 1921 |
| BssNI | GRCGYC | 1 cut(s) | 1599 |
| Bst2UI | CCWGG | 3 cut(s) | 186, 902, 1311 |
| Bst4CI | ACNGT | 4 cut(s) | 588, 1272, 1571, 1757 |
| Bst6I | CTCTTC | 3 cut(s) | 33, 216, 1346 |
| BstACI | GRCGYC | 1 cut(s) | 1599 |
| BstAFI | CTTAAG | 2 cut(s) | 959, 1700 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 22, 163, 1628 |
| BstC8I | GCNNGC | 3 cut(s) | 1624, 1863, 1867 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 189, 1361 |
| BstF5I | GGATG | 6 cut(s) | 49, 73, 374, 401, 1020, 1225 |
| BstFNI | CGCG | 2 cut(s) | 347, 948 |
| BstH2I | RGCGCY | 1 cut(s) | 253 |
| BstHHI | GCGC | 1 cut(s) | 252 |
| BstKTI | GATC | 4 cut(s) | 172, 802, 952, 1924 |
| BstMAI | GTCTC | 3 cut(s) | 84, 99, 1553 |
| BstMBI | GATC | 4 cut(s) | 169, 799, 949, 1921 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 22, 163, 269, 353, 362, 449, 1628 |
| BstNI | CCWGG | 3 cut(s) | 186, 902, 1311 |
| BstSCI | CCNGG | 3 cut(s) | 184, 900, 1309 |
| BstSFI | CTRYAG | 1 cut(s) | 1954 |
| BstSLI | GKGCMC | 2 cut(s) | 182, 1386 |
| BstUI | CGCG | 2 cut(s) | 347, 948 |
| BstV1I | GCAGC | 6 cut(s) | 128, 940, 1379, 1562, 1595, 1807 |
| BstV2I | GAAGAC | 2 cut(s) | 1099, 1555 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 851 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1791 |
| BsuI | GTATCC | 2 cut(s) | 270, 1741 |
| BsuRI | GGCC | 3 cut(s) | 1254, 1404, 1479 |
| BtsCI | GGATG | 6 cut(s) | 49, 73, 374, 401, 1020, 1225 |
| BtsI | GCAGTG | 1 cut(s) | 634 |
| BtsIMutI | CAGTG | 5 cut(s) | 540, 634, 1077, 1334, 1603 |
| BveI | ACCTGC | 2 cut(s) | 443, 1798 |
| Cac8I | GCNNGC | 3 cut(s) | 1624, 1863, 1867 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1575 |
| CciI | TCATGA | 1 cut(s) | 985 |
| CfoI | GCGC | 1 cut(s) | 252 |
| Cfr10I | RCCGGY | 3 cut(s) | 1415, 1445, 1840 |
| Cfr13I | GGNCC | 3 cut(s) | 943, 1253, 1403 |
| Csp6I | GTAC | 5 cut(s) | 1168, 1273, 1507, 1612, 1836 |
| CspAI | ACCGGT | 2 cut(s) | 1445, 1840 |
| CviQI | GTAC | 5 cut(s) | 1168, 1273, 1507, 1612, 1836 |
| DpnI | GATC | 4 cut(s) | 171, 801, 951, 1923 |
| DpnII | GATC | 4 cut(s) | 169, 799, 949, 1921 |
| Eam1104I | CTCTTC | 3 cut(s) | 33, 216, 1346 |
| EarI | CTCTTC | 3 cut(s) | 33, 216, 1346 |
| Eco24I | GRGCYC | 1 cut(s) | 1399 |
| Eco31I | GGTCTC | 1 cut(s) | 84 |
| Eco32I | GATATC | 1 cut(s) | 1307 |
| Eco47I | GGWCC | 1 cut(s) | 943 |
| Eco57I | CTGAAG | 1 cut(s) | 105 |
| Eco81I | CCTNAGG | 1 cut(s) | 1791 |
| Eco88I | CYCGRG | 4 cut(s) | 692, 1398, 1660, 1848 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 189, 1361 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1253 |
| EcoRII | CCWGG | 3 cut(s) | 184, 900, 1309 |
| EcoRV | GATATC | 1 cut(s) | 1307 |
| EcoT22I | ATGCAT | 1 cut(s) | 18 |
| EcoT38I | GRGCYC | 1 cut(s) | 1399 |
| FaqI | GGGAC | 4 cut(s) | 430, 1269, 1841, 1952 |
| FauI | CCCGC | 2 cut(s) | 278, 583 |
| FblI | GTMKAC | 2 cut(s) | 211, 1960 |
| FokI | GGATG | 6 cut(s) | 56, 80, 381, 388, 1007, 1232 |
| FriOI | GRGCYC | 1 cut(s) | 1399 |
| FspBI | CTAG | 5 cut(s) | 33, 281, 1214, 1250, 1559 |
| GlaI | GCGC | 1 cut(s) | 251 |
| GsaI | CCCAGC | 1 cut(s) | 1973 |
| GsuI | CTGGAG | 1 cut(s) | 597 |
| HaeII | RGCGCY | 1 cut(s) | 253 |
| HaeIII | GGCC | 3 cut(s) | 1254, 1404, 1479 |
| HapII | CCGG | 6 cut(s) | 746, 1064, 1416, 1446, 1734, 1841 |
| HhaI | GCGC | 1 cut(s) | 252 |
| Hin1I | GRCGYC | 1 cut(s) | 1599 |
| Hin6I | GCGC | 1 cut(s) | 250 |
| HinP1I | GCGC | 1 cut(s) | 250 |
| HinfI | GANTC | 6 cut(s) | 697, 1373, 1491, 1650, 1962, 2044 |
| HpaII | CCGG | 6 cut(s) | 746, 1064, 1416, 1446, 1734, 1841 |
| HphI | GGTGA | 4 cut(s) | 483, 576, 1019, 1478 |
| Hpy166II | GTNNAC | 5 cut(s) | 212, 1168, 1603, 1838, 1961 |
| Hpy188I | TCNGA | 5 cut(s) | 711, 939, 1194, 1722, 1917 |
| Hpy8I | GTNNAC | 5 cut(s) | 212, 1168, 1603, 1838, 1961 |
| Hpy99I | CGWCG | 2 cut(s) | 10, 99 |
| HpyAV | CCTTC | 6 cut(s) | 67, 220, 252, 288, 1287, 1976 |
| HpyCH4III | ACNGT | 4 cut(s) | 588, 1272, 1571, 1757 |
| HpyCH4IV | ACGT | 2 cut(s) | 1135, 1599 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 22, 163, 269, 353, 362, 449, 1628 |
| HpySE526I | ACGT | 2 cut(s) | 1135, 1599 |
| Hsp92I | GRCGYC | 1 cut(s) | 1599 |
| HspAI | GCGC | 1 cut(s) | 250 |
| Kpn2I | TCCGGA | 2 cut(s) | 1063, 1733 |
| KpnI | GGTACC | 1 cut(s) | 1276 |
| Kzo9I | GATC | 4 cut(s) | 169, 799, 949, 1921 |
| LguI | GCTCTTC | 1 cut(s) | 1346 |
| LmnI | GCTCC | 7 cut(s) | 229, 583, 603, 715, 1424, 1596, 1775 |
| Lsp1109I | GCAGC | 6 cut(s) | 128, 940, 1379, 1562, 1595, 1807 |
| LweI | GCATC | 3 cut(s) | 485, 1029, 1700 |
| MaeI | CTAG | 5 cut(s) | 33, 281, 1214, 1250, 1559 |
| MaeII | ACGT | 2 cut(s) | 1135, 1599 |
| MaeIII | GTNAC | 5 cut(s) | 288, 759, 920, 1266, 1466 |
| MalI | GATC | 4 cut(s) | 171, 801, 951, 1923 |
| MbiI | CCGCTC | 2 cut(s) | 578, 2008 |
| MboI | GATC | 4 cut(s) | 169, 799, 949, 1921 |
| MfeI | CAATTG | 1 cut(s) | 1686 |
| MhlI | GDGCHC | 3 cut(s) | 182, 1386, 1399 |
| MluCI | AATT | 8 cut(s) | 304, 687, 791, 910, 1242, 1426, 1686, 2000 |
| MlyI | GAGTC | 1 cut(s) | 1956 |
| MmeI | TCCRAC | 1 cut(s) | 1297 |
| Mph1103I | ATGCAT | 1 cut(s) | 18 |
| MroI | TCCGGA | 2 cut(s) | 1063, 1733 |
| MseI | TTAA | 8 cut(s) | 333, 858, 954, 960, 1142, 1701, 1814, 1908 |
| MslI | CAYNNNNRTG | 3 cut(s) | 68, 849, 990 |
| MspA1I | CMGCKG | 3 cut(s) | 1634, 1646, 1833 |
| MspCI | CTTAAG | 2 cut(s) | 959, 1700 |
| MspI | CCGG | 6 cut(s) | 746, 1064, 1416, 1446, 1734, 1841 |
| MspR9I | CCNGG | 3 cut(s) | 186, 902, 1311 |
| MunI | CAATTG | 1 cut(s) | 1686 |
| Mva1269I | GAATGC | 1 cut(s) | 1112 |
| MvaI | CCWGG | 3 cut(s) | 186, 902, 1311 |
| MvnI | CGCG | 2 cut(s) | 347, 948 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 22, 163, 269, 353, 362, 449, 1628 |
| NdeII | GATC | 4 cut(s) | 169, 799, 949, 1921 |
| NlaIV | GGNNCC | 6 cut(s) | 1255, 1274, 1385, 1420, 1444, 1714 |
| NmuCI | GTSAC | 1 cut(s) | 1466 |
| NsiI | ATGCAT | 1 cut(s) | 18 |
| PaeR7I | CTCGAG | 3 cut(s) | 692, 1398, 1848 |
| PagI | TCATGA | 1 cut(s) | 985 |
| PciSI | GCTCTTC | 1 cut(s) | 1346 |
| PctI | GAATGC | 1 cut(s) | 1112 |
| PfeI | GAWTC | 5 cut(s) | 697, 1373, 1491, 1650, 2044 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1316 |
| PinAI | ACCGGT | 2 cut(s) | 1445, 1840 |
| PleI | GAGTC | 1 cut(s) | 1956 |
| PpsI | GAGTC | 1 cut(s) | 1956 |
| PsiI | TTATAA | 2 cut(s) | 309, 1887 |
| Psp6I | CCWGG | 3 cut(s) | 184, 900, 1309 |
| PspFI | CCCAGC | 1 cut(s) | 1969 |
| PspGI | CCWGG | 3 cut(s) | 184, 900, 1309 |
| PspN4I | GGNNCC | 6 cut(s) | 1255, 1274, 1385, 1420, 1444, 1714 |
| PspPI | GGNCC | 3 cut(s) | 943, 1253, 1403 |
| PspXI | VCTCGAGB | 1 cut(s) | 1398 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1575 |
| RsaI | GTAC | 5 cut(s) | 1169, 1274, 1508, 1613, 1837 |
| RsaNI | GTAC | 5 cut(s) | 1168, 1273, 1507, 1612, 1836 |
| RseI | CAYNNNNRTG | 3 cut(s) | 68, 849, 990 |
| SapI | GCTCTTC | 1 cut(s) | 1346 |
| SaqAI | TTAA | 8 cut(s) | 333, 858, 954, 960, 1142, 1701, 1814, 1908 |
| Sau3AI | GATC | 4 cut(s) | 169, 799, 949, 1921 |
| Sau96I | GGNCC | 3 cut(s) | 943, 1253, 1403 |
| SchI | GAGTC | 1 cut(s) | 1956 |
| ScrFI | CCNGG | 3 cut(s) | 186, 902, 1311 |
| SduI | GDGCHC | 3 cut(s) | 182, 1386, 1399 |
| SfaNI | GCATC | 3 cut(s) | 485, 1029, 1700 |
| SfcI | CTRYAG | 1 cut(s) | 1954 |
| Sfr274I | CTCGAG | 3 cut(s) | 692, 1398, 1848 |
| SinI | GGWCC | 1 cut(s) | 943 |
| SlaI | CTCGAG | 3 cut(s) | 692, 1398, 1848 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 68, 849, 990 |
| SmlI | CTYRAG | 6 cut(s) | 692, 959, 1160, 1398, 1700, 1848 |
| SmoI | CTYRAG | 6 cut(s) | 692, 959, 1160, 1398, 1700, 1848 |
| SpeI | ACTAGT | 2 cut(s) | 32, 1558 |
| Sse9I | AATT | 8 cut(s) | 304, 687, 791, 910, 1242, 1426, 1686, 2000 |
| SspI | AATATT | 1 cut(s) | 831 |
| SspMI | CTAG | 5 cut(s) | 33, 281, 1214, 1250, 1559 |
| StyD4I | CCNGG | 3 cut(s) | 184, 900, 1309 |
| TaaI | ACNGT | 4 cut(s) | 588, 1272, 1571, 1757 |
| TaiI | ACGT | 2 cut(s) | 1138, 1602 |
| TaqI | TCGA | 9 cut(s) | 256, 666, 693, 802, 1349, 1399, 1566, 1849, 1998 |
| TaqII | GACCGA | 1 cut(s) | 108 |
| TasI | AATT | 8 cut(s) | 304, 687, 791, 910, 1242, 1426, 1686, 2000 |
| TatI | WGTACW | 1 cut(s) | 1167 |
| TauI | GCSGC | 4 cut(s) | 350, 452, 1438, 1634 |
| TfiI | GAWTC | 5 cut(s) | 697, 1373, 1491, 1650, 2044 |
| Tru1I | TTAA | 8 cut(s) | 333, 858, 954, 960, 1142, 1701, 1814, 1908 |
| Tru9I | TTAA | 8 cut(s) | 333, 858, 954, 960, 1142, 1701, 1814, 1908 |
| TscAI | CASTG | 5 cut(s) | 540, 634, 1084, 1334, 1610 |
| TseFI | GTSAC | 1 cut(s) | 1466 |
| TseI | GCWGC | 6 cut(s) | 116, 928, 1367, 1575, 1583, 1820 |
| Tsp45I | GTSAC | 1 cut(s) | 1466 |
| TspDTI | ATGAA | 6 cut(s) | 447, 572, 797, 974, 1002, 2057 |
| TspGWI | ACGGA | 2 cut(s) | 23, 728 |
| TspRI | CASTG | 5 cut(s) | 540, 634, 1084, 1334, 1610 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1316 |
| Vha464I | CTTAAG | 2 cut(s) | 959, 1700 |
| VpaK11BI | GGWCC | 1 cut(s) | 943 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 189, 1361 |
| XapI | RAATTY | 2 cut(s) | 687, 2000 |
| XbaI | TCTAGA | 1 cut(s) | 1213 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 1032, 1602, 1877 |
| XhoI | CTCGAG | 3 cut(s) | 692, 1398, 1848 |
| XmiI | GTMKAC | 2 cut(s) | 211, 1960 |
| XspI | CTAG | 5 cut(s) | 33, 281, 1214, 1250, 1559 |
| ZraI | GACGTC | 1 cut(s) | 1600 |
| Zsp2I | ATGCAT | 1 cut(s) | 18 |