Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0009387

Physical Location & Seq

Genomic Coordinates Forward (+)

20133879 .. 20139429

Gene Structure 5551 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1138200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGGCTTCGGGTCTTCAGAAGTTAATCACAAGTGAAGAAGATGATGACGAAGAAATGGAGATGGACGTGAAAGAAGAGGACGATGGCGATGAAGAAGATGATGAAGATGGAGAGAAGCATGTTGATGCCGCCCAAATGATGGTGGGCGTTGATGGGGAAATGCCAACAAGAAGTAATAATAATAACCGTTTTCAACAGCACCATCAATTTCAAGAACAAGTGGGGACTCCAGGAGGGGGAGGAGCTAGGAGGTGTAGACCGATAGAAGAGAAAGAGAGAACTAAGTTAAGAGAACGGCAGCGCAGGGCTATCACTGCGAGGATCTTAGCAGGGCTGCGGAGACATGGAAATTATAATCTTAGAGTTAGGGCTGATATCAATGATGTAATTGCAGCTTTGGCTAGGGAAGCTGGCTGGGTTGTTCTTCCAGATGGAACAACGTTTCCTTCAAAATCTCAGGGTGCAAGGCTGGCTGGTGTCAATTCTGCGCCAGTGACATCATCCTCCCAAATGGTGTCCCCACATACTCCTGCTTCCCTTAAAGGAGGTACTTCTAGCTATCAGAGCCCTGGGGAGCTTAATGCTTGTAACATCAAAGGTGTTTATTTGCCCAGTTTATCACCTTATGATCTCCCCTCAAGTGCTCGGTCCCAAAGTTCATCCCTTGTGGGAGAAGGAGCATGTCAAACAGAGAGTCATCCTCTTATAGGTGGCTCCATGGATAATATTGGTGACAAACAGATTGTTGACATACCCCTGAAGTTACAAGAACGCGATTTCTCCAGCACCGCTAACATTCCAGTTTATATAATGCTACCACTTGGTGTCATTAATATGAAGTGTGAGCTGGTTGATCCAGATGGTCTATTAAAGCAGCTAAGGGTTTTGAAATCAGTTAATGTAGATGGGGTTATGGTTGATTGCTGGTGGGGAATAGTAGAAGGACATGCTCCACAGGAGTATAACTGGAATGGATACAGGAGGCTCTTTCAGATGGTGCGCGAGCTTAAGCTGAAGCTACAGGTTGTGATGTCATTTCATGAATGTGGAGGCAATGTTGGTGATGATGTGTGTATTCCACTGCCTCATTGGGTGGCTGAAATTGGTAGAAGCAACCCTGACATATTTTTCACCGATAGAGAGGGAAGACGTAATCCTGAATGCCTTTCGTGGGGAATTGACAAGGAACGAGTTCTAAGAGGCCGGACAGCTGTTGAGGTATACTTTGACTGCATGAGAAGCTTCCGTGTAGAGTTTGACGAGTACTTTAAAGATGGTAATATCTCCATGATTCAAGTTGGACTAGGTCCGTGTGGGGAATTGCGATACCCATCTTGTCCTGTAAAGCATGGTTGGCGATATCCCGGTGTCGGTGAATTTCAGTGTTACGATCAATATTTGCTGAAAAGTTTGAGGAAGGCAGCAGAAGCAAAGGGACACTCCTTCTGGGGTAGAGGTCCAGAAAATGCAGGTTCTTATAATTCCCGGCCAAATGAAACCAGTTTCTTTTCCGAAGGCGGTGATTATGATGGCTACTATGGCAGGTTCTTCCTTAACTGGTACTCTCGAGTTTTAGTTGATCATGGTGATCGGGTGCTTTCTCTAGCAAAGTTAGCTTTTGACGGAACCTGCATTGCTGCAAAGCTATCAGGTCTTCACTGGTGGTACAAGACAGCCAGTCATGCAGCTGAATTGACTGCAGGCTTCTATAATTCATGCAATCGTGATGGTTATGCTCCAATCATGACGATGCTAAAGAAGCACGAAGCTACTGTAAAATTAGCATGTACTGAATTGCACGTGTTAGACCAGCATGAAGAATTCCAAGAGGCACTGGGAGATTCTGAGGGTTTATTTTGGCAAGTGCTGAATGCTGCGTGGGATGTTTGCGTACCAGTTTCTAGTGAGAACGCTCTTGCTTGTCATGATCGTATCAGCTACAACAAGATATTGGATAATTCCAAGCCCTTGACTGATCCAGATGGAAGGCATTTGTCATCTTTTACCTACCTTAGGCTCAGTCCACTCCTAATGGAAAGACAAAACTTCATGGAATTTGAGCGATTCGTTAGGAGAATGCACGGGGAAGCTGTTGTTGATCACCAAGTATATAGCAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0016160 GO:0016161 GO:0016787 GO:0016798 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00500 map00500

Pfam Domains

Protein Families

BES1_N Glyco_hydro_14

Protein Analysis

707

Amino Acids

79.29

Weight (kDa)

5.53

Isoelectric Point (pI)

48.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BES1_N	PF05687	82 - 198	2.8e-37	BES1/BZR1 plant transcription factor, N-terminal
Glyco_hydro_14	PF01373	270 - 686	9.3e-123	Glycosyl hydrolase family 14

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009387)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45880
fragaria_vesca	FvH4_7g14210 FvH4_7g14210 FvH4_7g14210
malus_domestica	MD01G1059300.v1.1 MD07G1138200.v1.1
prunus_persica	Prupe.2G169900_v2.0.a1 Prupe.2G169900_v2.0.a1
pyrus_communis	pycom07g13560
rosa_chinensis	RchiOBHm_Chr1g0355141
rosa_laevigata	RLG00000028174
rosa_multiflora	Rmu_sc0003115.1_g000036 Rmu_sc0004488.1_g000006
rosa_roxburghii	Rroxscaffold_4G00300640
rosa_rugosa	Rorug01G0245400 Rorug01G0245500 Rorug01G0245600
rosa_samantha	Rh1AG257700 Rh1BG227200 Rh1CG241300 Rh1DG254900
rosa_wichuraiana	Rw1G022740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	354, 1479
Acc36I	ACCTGC	3 cut(s)	1460, 1533, 1637
AccB7I	CCANNNNNTGG	1 cut(s)	139
AccI	GTMKAC	2 cut(s)	256, 1221
AccII	CGCG	2 cut(s)	774, 1002
AciI	CCGC	4 cut(s)	129, 337, 789, 1518
AclI	AACGTT	1 cut(s)	440
AclWI	GGATC	3 cut(s)	329, 848, 1970
AcoI	YGGCCR	1 cut(s)	1487
AcsI	RAATTY	3 cut(s)	1376, 1820, 2054
AcuI	CTGAAG	2 cut(s)	779, 1034
AcvI	CACGTG	1 cut(s)	1801
AdeI	CACNNNGTG	1 cut(s)	824
AfaI	GTAC	6 cut(s)	550, 1265, 1562, 1667, 1789, 1893
AfiI	CCNNNNNNNGG	6 cut(s)	139, 236, 707, 1171, 1370, 2013
AflII	CTTAAG	1 cut(s)	1007
AflIII	ACRYGT	1 cut(s)	1800
AgsI	TTSAA	5 cut(s)	194, 212, 450, 889, 1295
AhdI	GACNNNNNGTC	1 cut(s)	1677
AjiI	CACGTC	1 cut(s)	67
AjnI	CCWGG	2 cut(s)	229, 568
AloI	GAACNNNNNNTCC	2 cut(s)	427, 459
Alw21I	GWGCWC	1 cut(s)	646
Alw26I	GTCTC	1 cut(s)	334
AlwI	GGATC	3 cut(s)	329, 848, 1970
Ama87I	CYCGRG	1 cut(s)	1566
AoxI	GGCC	2 cut(s)	1201, 1487
ApeKI	GCWGC	8 cut(s)	298, 334, 392, 874, 1421, 1637, 1685, 1874
ApoI	RAATTY	3 cut(s)	1376, 1820, 2054
ArsI	GACNNNNNNTTYG	2 cut(s)	679, 711
AseI	ATTAAT	1 cut(s)	831
Asp700I	GAANNNNTTC	1 cut(s)	1191
AspLEI	GCGC	3 cut(s)	303, 490, 1002
AspS9I	GGNCC	3 cut(s)	648, 1307, 1457
AsuC2I	CCSGG	2 cut(s)	1365, 1486
AsuHPI	GGTGA	8 cut(s)	612, 743, 1073, 1123, 1385, 1532, 1598, 2093
AvaI	CYCGRG	1 cut(s)	1566
AvaII	GGWCC	3 cut(s)	648, 1307, 1457
AxyI	CCTNAGG	1 cut(s)	2012
BanII	GRGCYC	1 cut(s)	569
BbrPI	CACGTG	1 cut(s)	1801
BbsI	GAAGAC	3 cut(s)	5, 1153, 1646
Bbv12I	GWGCWC	1 cut(s)	646
BbvI	GCAGC	8 cut(s)	310, 321, 404, 886, 1433, 1624, 1697, 1861
BceAI	ACGGC	1 cut(s)	311
BciT130I	CCWGG	2 cut(s)	231, 570
BciVI	GTATCC	1 cut(s)	968
BclI	TGATCA	2 cut(s)	1579, 2098
BcnI	CCSGG	2 cut(s)	1365, 1486
BcoDI	GTCTC	1 cut(s)	334
BfaI	CTAG	6 cut(s)	246, 402, 555, 1304, 1604, 1902
BfmI	CTRYAG	2 cut(s)	1019, 1698
BfrI	CTTAAG	1 cut(s)	1007
BfuAI	ACCTGC	3 cut(s)	1460, 1533, 1637
BfuI	GTATCC	1 cut(s)	968
BisI	GCNGC	9 cut(s)	129, 299, 335, 393, 875, 1422, 1638, 1686, 1875
BlsI	GCNGC	9 cut(s)	130, 300, 336, 394, 876, 1423, 1639, 1687, 1876
BmcAI	AGTACT	1 cut(s)	1265
Bme1390I	CCNGG	4 cut(s)	231, 570, 1365, 1486
Bme18I	GGWCC	3 cut(s)	648, 1307, 1457
BmeRI	GACNNNNNGTC	1 cut(s)	1677
BmeT110I	CYCGRG	1 cut(s)	1566
BmgBI	CACGTC	1 cut(s)	67
BmgT120I	GGNCC	3 cut(s)	648, 1307, 1457
BmiI	GGNNCC	3 cut(s)	650, 715, 1627
BmrFI	CCNGG	4 cut(s)	231, 570, 1365, 1486
BmrI	ACTGGG	2 cut(s)	606, 1844
BmsI	GCATC	2 cut(s)	115, 1740
BmuI	ACTGGG	2 cut(s)	606, 1844
BpiI	GAAGAC	3 cut(s)	5, 1153, 1646
BplI	GAGNNNNNCTC	2 cut(s)	685, 717
BpmI	CTGGAG	2 cut(s)	213, 766
Bpu10I	CCTNAGC	1 cut(s)	878
BpuEI	CTTGAG	1 cut(s)	622
BpuMI	CCSGG	2 cut(s)	1365, 1486
BsaAI	YACGTR	1 cut(s)	1801
BsaBI	GATNNNNATC	1 cut(s)	1330
BsaJI	CCNNGG	3 cut(s)	568, 569, 717
BsaXI	ACNNNNNCTCC	2 cut(s)	1041, 1071
Bsc4I	CCNNNNNNNGG	6 cut(s)	139, 236, 707, 1171, 1370, 2013
Bse21I	CCTNAGG	1 cut(s)	2012
Bse3DI	GCAATG	2 cut(s)	1060, 1632
Bse8I	GATNNNNATC	1 cut(s)	1330
BseBI	CCWGG	2 cut(s)	231, 570
BseDI	CCNNGG	3 cut(s)	568, 569, 717
BseGI	GGATG	4 cut(s)	500, 659, 697, 1888
BseJI	GATNNNNATC	1 cut(s)	1330
BseLI	CCNNNNNNNGG	6 cut(s)	139, 236, 707, 1171, 1370, 2013
BseMI	GCAATG	2 cut(s)	1060, 1632
BseMII	CTCAG	3 cut(s)	470, 1836, 2032
BseRI	GAGGAG	1 cut(s)	255
BseXI	GCAGC	8 cut(s)	310, 321, 404, 886, 1433, 1624, 1697, 1861
BseYI	CCCAGC	1 cut(s)	414
Bsh1236I	CGCG	2 cut(s)	774, 1002
BshFI	GGCC	2 cut(s)	1203, 1489
BsiHKAI	GWGCWC	1 cut(s)	646
BsiHKCI	CYCGRG	1 cut(s)	1566
BsiSI	CCGG	3 cut(s)	1204, 1365, 1486
BslFI	GGGAC	4 cut(s)	238, 502, 634, 1449
BslI	CCNNNNNNNGG	6 cut(s)	139, 236, 707, 1171, 1370, 2013
BsmAI	GTCTC	1 cut(s)	334
BsmFI	GGGAC	4 cut(s)	238, 502, 634, 1449
BsmI	GAATGC	3 cut(s)	1166, 1876, 2082
BsnI	GGCC	2 cut(s)	1203, 1489
BsoBI	CYCGRG	1 cut(s)	1566
Bsp1286I	GDGCHC	2 cut(s)	569, 646
Bsp143I	GATC	9 cut(s)	321, 628, 853, 1390, 1579, 1588, 1927, 1975, 2098
Bsp19I	CCATGG	1 cut(s)	717
BspACI	CCGC	4 cut(s)	129, 337, 789, 1518
BspANI	GGCC	2 cut(s)	1203, 1489
BspCNI	CTCAG	3 cut(s)	469, 1837, 2031
BspFNI	CGCG	2 cut(s)	774, 1002
BspHI	TCATGA	3 cut(s)	1039, 1743, 1924
BspLI	GGNNCC	3 cut(s)	650, 715, 1627
BspMAI	CTGCAG	1 cut(s)	1702
BspMI	ACCTGC	3 cut(s)	1460, 1533, 1637
BspPI	GGATC	3 cut(s)	329, 848, 1970
BspTI	CTTAAG	1 cut(s)	1007
BsrDI	GCAATG	2 cut(s)	1060, 1632
BssECI	CCNNGG	3 cut(s)	568, 569, 717
BssMI	GATC	9 cut(s)	321, 628, 853, 1390, 1579, 1588, 1927, 1975, 2098
BssNAI	GTATAC	1 cut(s)	1222
BssT1I	CCWWGG	1 cut(s)	717
Bst1107I	GTATAC	1 cut(s)	1222
Bst2UI	CCWGG	2 cut(s)	231, 570
Bst4CI	ACNGT	2 cut(s)	188, 1774
Bst6I	CTCTTC	2 cut(s)	69, 261
BstAFI	CTTAAG	1 cut(s)	1007
BstBAI	YACGTR	1 cut(s)	1801
BstC8I	GCNNGC	4 cut(s)	412, 471, 1004, 1702
BstDEI	CTNAG	9 cut(s)	282, 325, 359, 456, 878, 1196, 1845, 2012, 2018
BstDSI	CCRYGG	1 cut(s)	717
BstENI	CCTNNNNNAGG	2 cut(s)	705, 2011
BstF5I	GGATG	4 cut(s)	500, 659, 697, 1888
BstFNI	CGCG	2 cut(s)	774, 1002
BstHHI	GCGC	3 cut(s)	303, 490, 1002
BstKTI	GATC	9 cut(s)	324, 631, 856, 1393, 1582, 1591, 1930, 1978, 2101
BstMAI	GTCTC	1 cut(s)	334
BstMBI	GATC	9 cut(s)	321, 628, 853, 1390, 1579, 1588, 1927, 1975, 2098
BstNI	CCWGG	2 cut(s)	231, 570
BstNSI	RCATGY	4 cut(s)	122, 684, 950, 1788
BstSCI	CCNGG	4 cut(s)	229, 568, 1363, 1484
BstSFI	CTRYAG	2 cut(s)	1019, 1698
BstUI	CGCG	2 cut(s)	774, 1002
BstV1I	GCAGC	8 cut(s)	310, 321, 404, 886, 1433, 1624, 1697, 1861
BstV2I	GAAGAC	3 cut(s)	5, 1153, 1646
BstX2I	RGATCY	1 cut(s)	321
BstYI	RGATCY	1 cut(s)	321
BstZ17I	GTATAC	1 cut(s)	1222
Bsu36I	CCTNAGG	1 cut(s)	2012
BsuI	GTATCC	1 cut(s)	968
BsuRI	GGCC	2 cut(s)	1203, 1489
BtgI	CCRYGG	1 cut(s)	717
BtgZI	GCGATG	1 cut(s)	102
BtrI	CACGTC	1 cut(s)	67
BtsCI	GGATG	4 cut(s)	500, 659, 697, 1888
BtsI	GCAGTG	2 cut(s)	312, 1079
BtsIMutI	CAGTG	6 cut(s)	312, 498, 1079, 1388, 1657, 1832
BveI	ACCTGC	3 cut(s)	1460, 1533, 1637
Cac8I	GCNNGC	4 cut(s)	412, 471, 1004, 1702
CciI	TCATGA	3 cut(s)	1039, 1743, 1924
CfoI	GCGC	3 cut(s)	303, 490, 1002
Cfr13I	GGNCC	3 cut(s)	648, 1307, 1457
Csp6I	GTAC	6 cut(s)	549, 1264, 1561, 1666, 1788, 1892
CviQI	GTAC	6 cut(s)	549, 1264, 1561, 1666, 1788, 1892
DdeI	CTNAG	9 cut(s)	282, 325, 359, 456, 878, 1196, 1845, 2012, 2018
DpnI	GATC	9 cut(s)	323, 630, 855, 1392, 1581, 1590, 1929, 1977, 2100
DpnII	GATC	9 cut(s)	321, 628, 853, 1390, 1579, 1588, 1927, 1975, 2098
DraI	TTTAAA	1 cut(s)	1270
DraIII	CACNNNGTG	1 cut(s)	824
DriI	GACNNNNNGTC	1 cut(s)	1677
EaeI	YGGCCR	1 cut(s)	1487
Eam1104I	CTCTTC	2 cut(s)	69, 261
Eam1105I	GACNNNNNGTC	1 cut(s)	1677
EarI	CTCTTC	2 cut(s)	69, 261
Eco130I	CCWWGG	1 cut(s)	717
Eco24I	GRGCYC	1 cut(s)	569
Eco32I	GATATC	2 cut(s)	376, 1361
Eco47I	GGWCC	3 cut(s)	648, 1307, 1457
Eco57I	CTGAAG	2 cut(s)	779, 1034
Eco72I	CACGTG	1 cut(s)	1801
Eco81I	CCTNAGG	1 cut(s)	2012
Eco88I	CYCGRG	1 cut(s)	1566
EcoNI	CCTNNNNNAGG	2 cut(s)	705, 2011
EcoRI	GAATTC	1 cut(s)	1820
EcoRII	CCWGG	2 cut(s)	229, 568
EcoRV	GATATC	2 cut(s)	376, 1361
EcoT14I	CCWWGG	1 cut(s)	717
EcoT38I	GRGCYC	1 cut(s)	569
ErhI	CCWWGG	1 cut(s)	717
FaqI	GGGAC	4 cut(s)	238, 502, 634, 1449
FbaI	TGATCA	2 cut(s)	1579, 2098
FblI	GTMKAC	2 cut(s)	256, 1221
Fnu4HI	GCNGC	9 cut(s)	129, 299, 335, 393, 875, 1422, 1638, 1686, 1875
FokI	GGATG	4 cut(s)	487, 646, 684, 1895
FriOI	GRGCYC	1 cut(s)	569
Fsp4HI	GCNGC	9 cut(s)	129, 299, 335, 393, 875, 1422, 1638, 1686, 1875
FspBI	CTAG	6 cut(s)	246, 402, 555, 1304, 1604, 1902
GlaI	GCGC	3 cut(s)	302, 489, 1001
GluI	GCNGC	9 cut(s)	129, 299, 335, 393, 875, 1422, 1638, 1686, 1875
GsaI	CCCAGC	1 cut(s)	418
GsuI	CTGGAG	2 cut(s)	213, 766
HaeIII	GGCC	2 cut(s)	1203, 1489
HapII	CCGG	3 cut(s)	1204, 1365, 1486
HhaI	GCGC	3 cut(s)	303, 490, 1002
Hin6I	GCGC	3 cut(s)	301, 488, 1000
HinP1I	GCGC	3 cut(s)	301, 488, 1000
HincII	GTYRAC	1 cut(s)	748
HindII	GTYRAC	1 cut(s)	748
HindIII	AAGCTT	1 cut(s)	1240
HinfI	GANTC	5 cut(s)	226, 694, 1291, 1841, 2064
HpaII	CCGG	3 cut(s)	1204, 1365, 1486
HphI	GGTGA	8 cut(s)	612, 743, 1073, 1123, 1385, 1532, 1598, 2093
Hpy166II	GTNNAC	4 cut(s)	257, 748, 1222, 2024
Hpy188I	TCNGA	5 cut(s)	18, 564, 993, 1513, 1846
Hpy8I	GTNNAC	4 cut(s)	257, 748, 1222, 2024
HpyAV	CCTTC	7 cut(s)	456, 668, 935, 1411, 1453, 1508, 1980
HpyCH4III	ACNGT	2 cut(s)	188, 1774
HpyCH4IV	ACGT	4 cut(s)	66, 440, 1150, 1800
HpyF3I	CTNAG	9 cut(s)	282, 325, 359, 456, 878, 1196, 1845, 2012, 2018
HpySE526I	ACGT	4 cut(s)	66, 440, 1150, 1800
HspAI	GCGC	3 cut(s)	301, 488, 1000
Ksp22I	TGATCA	2 cut(s)	1579, 2098
Kzo9I	GATC	9 cut(s)	321, 628, 853, 1390, 1579, 1588, 1927, 1975, 2098
LmnI	GCTCC	6 cut(s)	242, 574, 677, 719, 955, 1741
Lsp1109I	GCAGC	8 cut(s)	310, 321, 404, 886, 1433, 1624, 1697, 1861
LweI	GCATC	2 cut(s)	115, 1740
MaeI	CTAG	6 cut(s)	246, 402, 555, 1304, 1604, 1902
MaeII	ACGT	4 cut(s)	66, 440, 1150, 1800
MaeIII	GTNAC	5 cut(s)	493, 587, 731, 762, 1385
MalI	GATC	9 cut(s)	323, 630, 855, 1392, 1581, 1590, 1929, 1977, 2100
MboI	GATC	9 cut(s)	321, 628, 853, 1390, 1579, 1588, 1927, 1975, 2098
MflI	RGATCY	1 cut(s)	321
MhlI	GDGCHC	2 cut(s)	569, 646
MlyI	GAGTC	2 cut(s)	220, 703
MmeI	TCCRAC	1 cut(s)	1279
MroXI	GAANNNNTTC	1 cut(s)	1191
MslI	CAYNNNNRTG	4 cut(s)	123, 833, 1044, 1748
MspA1I	CMGCKG	2 cut(s)	1211, 1688
MspCI	CTTAAG	1 cut(s)	1007
MspI	CCGG	3 cut(s)	1204, 1365, 1486
MspR9I	CCNGG	4 cut(s)	231, 570, 1365, 1486
Mva1269I	GAATGC	3 cut(s)	1166, 1876, 2082
MvaI	CCWGG	2 cut(s)	231, 570
MvnI	CGCG	2 cut(s)	774, 1002
NciI	CCSGG	2 cut(s)	1365, 1486
NcoI	CCATGG	1 cut(s)	717
NdeII	GATC	9 cut(s)	321, 628, 853, 1390, 1579, 1588, 1927, 1975, 2098
NlaIV	GGNNCC	3 cut(s)	650, 715, 1627
NmuCI	GTSAC	2 cut(s)	493, 731
NspI	RCATGY	4 cut(s)	122, 684, 950, 1788
PaeR7I	CTCGAG	1 cut(s)	1566
PagI	TCATGA	3 cut(s)	1039, 1743, 1924
PasI	CCCWGGG	1 cut(s)	569
PctI	GAATGC	3 cut(s)	1166, 1876, 2082
PdmI	GAANNNNTTC	1 cut(s)	1191
PfeI	GAWTC	3 cut(s)	1291, 1841, 2064
PflFI	GACNNNGTC	1 cut(s)	1305
PflMI	CCANNNNNTGG	1 cut(s)	139
PfoI	TCCNGGA	1 cut(s)	229
PkrI	GCNGC	9 cut(s)	130, 300, 336, 394, 876, 1423, 1639, 1687, 1876
PleI	GAGTC	2 cut(s)	220, 702
PmaCI	CACGTG	1 cut(s)	1801
PmlI	CACGTG	1 cut(s)	1801
PpsI	GAGTC	2 cut(s)	220, 702
Ppu21I	YACGTR	1 cut(s)	1801
PshBI	ATTAAT	1 cut(s)	831
PsiI	TTATAA	2 cut(s)	354, 1479
Psp1406I	AACGTT	1 cut(s)	440
Psp6I	CCWGG	2 cut(s)	229, 568
PspCI	CACGTG	1 cut(s)	1801
PspFI	CCCAGC	1 cut(s)	414
PspGI	CCWGG	2 cut(s)	229, 568
PspN4I	GGNNCC	3 cut(s)	650, 715, 1627
PspPI	GGNCC	3 cut(s)	648, 1307, 1457
PstI	CTGCAG	1 cut(s)	1702
PsuI	RGATCY	1 cut(s)	321
PsyI	GACNNNGTC	1 cut(s)	1305
PvuII	CAGCTG	2 cut(s)	1211, 1688
RsaI	GTAC	6 cut(s)	550, 1265, 1562, 1667, 1789, 1893
RsaNI	GTAC	6 cut(s)	549, 1264, 1561, 1666, 1788, 1892
RseI	CAYNNNNRTG	4 cut(s)	123, 833, 1044, 1748
SatI	GCNGC	9 cut(s)	129, 299, 335, 393, 875, 1422, 1638, 1686, 1875
Sau3AI	GATC	9 cut(s)	321, 628, 853, 1390, 1579, 1588, 1927, 1975, 2098
Sau96I	GGNCC	3 cut(s)	648, 1307, 1457
ScaI	AGTACT	1 cut(s)	1265
SchI	GAGTC	2 cut(s)	220, 703
ScrFI	CCNGG	4 cut(s)	231, 570, 1365, 1486
SduI	GDGCHC	2 cut(s)	569, 646
SfaNI	GCATC	2 cut(s)	115, 1740
SfcI	CTRYAG	2 cut(s)	1019, 1698
Sfr274I	CTCGAG	1 cut(s)	1566
SinI	GGWCC	3 cut(s)	648, 1307, 1457
SlaI	CTCGAG	1 cut(s)	1566
SmiMI	CAYNNNNRTG	4 cut(s)	123, 833, 1044, 1748
SmlI	CTYRAG	3 cut(s)	637, 1007, 1566
SmoI	CTYRAG	3 cut(s)	637, 1007, 1566
SsiI	CCGC	4 cut(s)	129, 337, 789, 1518
SspI	AATATT	2 cut(s)	727, 1397
SspMI	CTAG	6 cut(s)	246, 402, 555, 1304, 1604, 1902
StyD4I	CCNGG	4 cut(s)	229, 568, 1363, 1484
StyI	CCWWGG	1 cut(s)	717
TaaI	ACNGT	2 cut(s)	188, 1774
TaiI	ACGT	4 cut(s)	69, 443, 1153, 1803
TaqI	TCGA	1 cut(s)	1567
TaqII	GACCGA	2 cut(s)	274, 636
TatI	WGTACW	2 cut(s)	1263, 1787
TauI	GCSGC	1 cut(s)	131
TfiI	GAWTC	3 cut(s)	1291, 1841, 2064
TscAI	CASTG	6 cut(s)	319, 498, 1086, 1388, 1664, 1839
TseFI	GTSAC	2 cut(s)	493, 731
TseI	GCWGC	8 cut(s)	298, 334, 392, 874, 1421, 1637, 1685, 1874
Tsp45I	GTSAC	2 cut(s)	493, 731
TspGWI	ACGGA	3 cut(s)	1235, 1299, 1638
TspRI	CASTG	6 cut(s)	319, 498, 1086, 1388, 1664, 1839
Tth111I	GACNNNGTC	1 cut(s)	1305
Van91I	CCANNNNNTGG	1 cut(s)	139
Vha464I	CTTAAG	1 cut(s)	1007
VpaK11BI	GGWCC	3 cut(s)	648, 1307, 1457
VspI	ATTAAT	1 cut(s)	831
XagI	CCTNNNNNAGG	2 cut(s)	705, 2011
XapI	RAATTY	3 cut(s)	1376, 1820, 2054
XceI	RCATGY	4 cut(s)	122, 684, 950, 1788
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1086
XhoI	CTCGAG	1 cut(s)	1566
XmiI	GTMKAC	2 cut(s)	256, 1221
XmnI	GAANNNNTTC	1 cut(s)	1191
XspI	CTAG	6 cut(s)	246, 402, 555, 1304, 1604, 1902
ZrmI	AGTACT	1 cut(s)	1265

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.