Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0009387

Physical Location & Seq

Genomic Coordinates Reverse (-)

16303983 .. 16309024

Gene Structure 5042 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1059300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1950 bp

ATGATGGCAGGGGTTGATGGAGAAATGCCAACAATAAGTAATAATAATAACCGTTTGCAACAGCACCATCAATTTCAAGAACAAGTGGGGACTGCCGGAGGGGGAGGAGCTAGGAGGTGTAGACCCATGGAAGAGAAGGAGAGAACCAAGTTAAGAGAACGGCAGCGCAGGGCAATCACGGCGAGGATCTTAGCAGGGCTACGGAGGCATGGAAATTATAATCTTAGAGTTAGGGCTGATATCAATGATGTAGTTGCAGCTTTGGCTAGGGAAGCTGGCTGGGTTGTTCTTCCAGATGGAACAACATTTCCTTCAAAATCTCAGGGCCCAAGGCTGGCTGGTGTCAATTCTGCGGCAGTGACTTCATCATCATCCCAAATAGTATCCCCACGTACTCCTGCTTGCCTTAAAGGAGTTACTTCTGGCTATCAGAGCCCTGGGGAGCTTAATGCTTCCAACACCAAAGGTGTTTATTTGCCTAGTTTATCGCCTTATGATCTCCCCTCAAGTGCTCGGTCCCAAGGTTCATCCATTGTTGGAGATGGAGCAGGTCAAACAGAGAGTCATCCTCTTATTGGTGGCTCCATGGATAATGTTGGCAACAAACAGATTGTTGACATACCCCTGAAGTTACAAGAACGTGATTTCTCCAGCACTGCGTACATTCCAGTTTATGTAATGCTACCACTAGGTGTTATTAACATGAAGTGTGAGCTGGTTGATCCAGATGGTCTACTAAAGCAGCTAAGGGTATTGAAATCAGTTAGTGTAGATGGCATTATGGTTGATTGCTGGTGGGGAATAGTAGAGGGACATGCTCCACAGGAGTATAATTGGAATGGATACAAGAGGCTCTTTTGGATGGTGTGCGAGCTTAAGCTGAAGCTACAGACAATGTTGGTGATGATGTATGTATTCCACTGCCTCATTGGTAGAGGCAACCCTGACATATTTTTCACCGATAGAGAGGGAAGACATAATCCTGAATGCCTTTCATGGGGAATTGACAAGAAACGAGTTTTAAGAGGCCGGACGGCTGTTGAGGTATACTTTGACTACATGAGAAGCTTCTGTGTAGAGTTTGACGAGTACTTTAAAAATGGTAACATCTCCATGATTCAAGTTGGACTAGGTCCGTGTGGGGAATTGCGATACCCATCTTGTCCTGTAAAGCATGGTTGGCGGTATCCCGGTGTCGGTGATTTTCAGTGTTACGATCAGTATTTGATGAAAAGTTTGAGGAAGGCAACAGAAGCAAGGGGACACTCCTTCTGGGGTAGAGGTCCAGATAATGCAGGTTCTTATAATTCCGGGCCAAATGAAACCGGTTTCTTTTCCGATGGCGGTGATTATGATGGCTACTATGGCAGGTTCTTCCTTAATTGGTACTCTCGAGTTTTAGTTGATCATGGTGATCGGGTGCTTTCTCTAGCAAAGTTAGCTTTCGACGGAACCTGCATTGCTGCAAAGCTATCAGGTCTTCACTGGTGGTACAAGACGGCCAGTCATGCGGCTGAGTTGACTGCGGGCTTCTATAATCCATGCAACCGTGATGGTTATTCTCCAATTGCGACGATGCTAAAGAAGCATGAAGCTACTTTAAGCTTAGCATGTACTGAATTGCACATGTTAGACCAGCATGAAGATTTCCAAGAGGCACTGGGAGATTCCGAGGGTTTATTTTGGCAAGTGCTGAATGCTGCGTGGGATGTTTGCTTACCAGTTTCTAGTGAGAACGCTCTTGCTTGTCATGATCGTATCAGCTACAACAAGATATTGGATAATGCTAAGCCCTTGACCGATCCAGATGGAAGGCATTTGTCATCTTTTACCTACCTTAGGCTCAGTCCACTTCTAATGGAAAGAGACAACTTCATGGAATTTGAACGATTCGTTAAGAGAATGCACGGGGAAGCTGTTGTTGACCAAGTATATAGCACAGTAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0016160 GO:0016161 GO:0016787 GO:0016798 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00500 map00500

Pfam Domains

Protein Families

BES1_N Glyco_hydro_14

Protein Analysis

650

Amino Acids

72.6

Weight (kDa)

6.81

Isoelectric Point (pI)

39.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BES1_N	PF05687	37 - 166	9e-38	BES1/BZR1 plant transcription factor, N-terminal
Glyco_hydro_14	PF01373	225 - 627	6.9e-96	Glycosyl hydrolase family 14

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009387)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45880
fragaria_vesca	FvH4_7g14210 FvH4_7g14210 FvH4_7g14210
malus_domestica	MD01G1059300.v1.1 MD07G1138200.v1.1
prunus_persica	Prupe.2G169900_v2.0.a1 Prupe.2G169900_v2.0.a1
pyrus_communis	pycom07g13560
rosa_chinensis	RchiOBHm_Chr1g0355141
rosa_laevigata	RLG00000028174
rosa_multiflora	Rmu_sc0003115.1_g000036 Rmu_sc0004488.1_g000006
rosa_roxburghii	Rroxscaffold_4G00300640
rosa_rugosa	Rorug01G0245400 Rorug01G0245500 Rorug01G0245600
rosa_samantha	Rh1AG257700 Rh1BG227200 Rh1CG241300 Rh1DG254900
rosa_wichuraiana	Rw1G022740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	219, 1305
Acc36I	ACCTGC	4 cut(s)	539, 1286, 1359, 1463
AccI	GTMKAC	3 cut(s)	121, 733, 1047
AciI	CCGC	5 cut(s)	353, 1183, 1344, 1511, 1526
AclWI	GGATC	3 cut(s)	194, 716, 1796
AcoI	YGGCCR	1 cut(s)	1500
AcsI	RAATTY	1 cut(s)	1880
AcuI	CTGAAG	2 cut(s)	647, 902
AdeI	CACNNNGTG	1 cut(s)	692
AfaI	GTAC	6 cut(s)	394, 662, 1091, 1388, 1493, 1615
AfiI	CCNNNNNNNGG	5 cut(s)	334, 575, 997, 1196, 1839
AflII	CTTAAG	1 cut(s)	875
AflIII	ACRYGT	1 cut(s)	1626
AgeI	ACCGGT	1 cut(s)	1325
AgsI	TTSAA	5 cut(s)	77, 315, 757, 1121, 1886
AhdI	GACNNNNNGTC	1 cut(s)	1503
AjnI	CCWGG	1 cut(s)	436
AloI	GAACNNNNNNTCC	2 cut(s)	292, 324
Alw21I	GWGCWC	1 cut(s)	514
Alw26I	GTCTC	1 cut(s)	1860
AlwI	GGATC	3 cut(s)	194, 716, 1796
Ama87I	CYCGRG	1 cut(s)	1392
AoxI	GGCC	4 cut(s)	325, 1027, 1313, 1500
ApaI	GGGCCC	1 cut(s)	329
ApeKI	GCWGC	5 cut(s)	163, 257, 742, 1463, 1700
ApoI	RAATTY	1 cut(s)	1880
ArsI	GACNNNNNNTTYG	2 cut(s)	547, 579
AsiGI	ACCGGT	1 cut(s)	1325
AspLEI	GCGC	1 cut(s)	168
AspS9I	GGNCC	6 cut(s)	325, 326, 516, 1133, 1283, 1313
AsuC2I	CCSGG	2 cut(s)	1191, 1312
AsuHPI	GGTGA	5 cut(s)	913, 949, 1211, 1358, 1424
AvaI	CYCGRG	1 cut(s)	1392
AvaII	GGWCC	3 cut(s)	516, 1133, 1283
AxyI	CCTNAGG	1 cut(s)	1838
BaeGI	GKGCMC	1 cut(s)	329
BanII	GRGCYC	2 cut(s)	329, 437
BbsI	GAAGAC	2 cut(s)	979, 1472
Bbv12I	GWGCWC	1 cut(s)	514
BbvI	GCAGC	5 cut(s)	175, 269, 754, 1450, 1687
BceAI	ACGGC	4 cut(s)	176, 195, 1050, 1515
BciT130I	CCWGG	1 cut(s)	438
BciVI	GTATCC	3 cut(s)	394, 836, 1197
BclI	TGATCA	1 cut(s)	1405
BcnI	CCSGG	2 cut(s)	1191, 1312
BcoDI	GTCTC	1 cut(s)	1860
BfaI	CTAG	7 cut(s)	111, 267, 480, 689, 1130, 1430, 1728
BfmI	CTRYAG	1 cut(s)	887
BfrI	CTTAAG	1 cut(s)	875
BfuAI	ACCTGC	4 cut(s)	539, 1286, 1359, 1463
BfuI	GTATCC	3 cut(s)	394, 836, 1197
BisI	GCNGC	7 cut(s)	164, 258, 354, 743, 1464, 1512, 1701
BlpI	GCTNAGC	2 cut(s)	1606, 1788
BlsI	GCNGC	7 cut(s)	165, 259, 355, 744, 1465, 1513, 1702
BmcAI	AGTACT	1 cut(s)	1091
Bme1390I	CCNGG	3 cut(s)	438, 1191, 1312
Bme18I	GGWCC	3 cut(s)	516, 1133, 1283
BmeRI	GACNNNNNGTC	1 cut(s)	1503
BmeT110I	CYCGRG	1 cut(s)	1392
BmgT120I	GGNCC	6 cut(s)	325, 326, 516, 1133, 1283, 1313
BmiI	GGNNCC	4 cut(s)	327, 518, 583, 1453
BmrFI	CCNGG	3 cut(s)	438, 1191, 1312
BmrI	ACTGGG	1 cut(s)	1670
BmsI	GCATC	1 cut(s)	1566
BmuI	ACTGGG	1 cut(s)	1670
BpiI	GAAGAC	2 cut(s)	979, 1472
BplI	GAGNNNNNCTC	2 cut(s)	553, 585
BpmI	CTGGAG	1 cut(s)	634
Bpu10I	CCTNAGC	1 cut(s)	746
Bpu1102I	GCTNAGC	2 cut(s)	1606, 1788
BpuEI	CTTGAG	1 cut(s)	490
BpuMI	CCSGG	2 cut(s)	1191, 1312
BsaAI	YACGTR	1 cut(s)	392
BsaBI	GATNNNNATC	1 cut(s)	1156
BsaJI	CCNNGG	7 cut(s)	126, 329, 436, 437, 520, 585, 1671
BsaWI	WCCGGW	1 cut(s)	1325
Bsc4I	CCNNNNNNNGG	5 cut(s)	334, 575, 997, 1196, 1839
Bse118I	RCCGGY	1 cut(s)	1325
Bse1I	ACTGG	5 cut(s)	668, 1490, 1503, 1665, 1721
Bse21I	CCTNAGG	1 cut(s)	1838
Bse3DI	GCAATG	1 cut(s)	1458
Bse8I	GATNNNNATC	1 cut(s)	1156
BseBI	CCWGG	1 cut(s)	438
BseDI	CCNNGG	7 cut(s)	126, 329, 436, 437, 520, 585, 1671
BseGI	GGATG	5 cut(s)	371, 527, 565, 867, 1714
BseJI	GATNNNNATC	1 cut(s)	1156
BseLI	CCNNNNNNNGG	5 cut(s)	334, 575, 997, 1196, 1839
BseMI	GCAATG	1 cut(s)	1458
BseMII	CTCAG	3 cut(s)	335, 1506, 1858
BseNI	ACTGG	5 cut(s)	668, 1490, 1503, 1665, 1721
BseRI	GAGGAG	1 cut(s)	120
BseSI	GKGCMC	1 cut(s)	329
BseXI	GCAGC	5 cut(s)	175, 269, 754, 1450, 1687
BseYI	CCCAGC	1 cut(s)	279
BshFI	GGCC	4 cut(s)	327, 1029, 1315, 1502
BshTI	ACCGGT	1 cut(s)	1325
BsiHKAI	GWGCWC	1 cut(s)	514
BsiHKCI	CYCGRG	1 cut(s)	1392
BsiSI	CCGG	5 cut(s)	96, 1030, 1191, 1311, 1326
BslFI	GGGAC	4 cut(s)	103, 502, 825, 1275
BslI	CCNNNNNNNGG	5 cut(s)	334, 575, 997, 1196, 1839
BsmAI	GTCTC	1 cut(s)	1860
BsmFI	GGGAC	4 cut(s)	103, 502, 825, 1275
BsmI	GAATGC	3 cut(s)	992, 1702, 1908
BsnI	GGCC	4 cut(s)	327, 1029, 1315, 1502
BsoBI	CYCGRG	1 cut(s)	1392
Bsp120I	GGGCCC	1 cut(s)	325
Bsp1286I	GDGCHC	3 cut(s)	329, 437, 514
Bsp143I	GATC	8 cut(s)	186, 496, 721, 1216, 1405, 1414, 1753, 1801
Bsp1720I	GCTNAGC	2 cut(s)	1606, 1788
Bsp19I	CCATGG	2 cut(s)	126, 585
BspACI	CCGC	5 cut(s)	353, 1183, 1344, 1511, 1526
BspANI	GGCC	4 cut(s)	327, 1029, 1315, 1502
BspCNI	CTCAG	3 cut(s)	334, 1507, 1857
BspHI	TCATGA	1 cut(s)	1750
BspLI	GGNNCC	4 cut(s)	327, 518, 583, 1453
BspMI	ACCTGC	4 cut(s)	539, 1286, 1359, 1463
BspPI	GGATC	3 cut(s)	194, 716, 1796
BspTI	CTTAAG	1 cut(s)	875
BsrDI	GCAATG	1 cut(s)	1458
BsrFI	RCCGGY	1 cut(s)	1325
BsrI	ACTGG	5 cut(s)	668, 1490, 1503, 1665, 1721
BssAI	RCCGGY	1 cut(s)	1325
BssECI	CCNNGG	7 cut(s)	126, 329, 436, 437, 520, 585, 1671
BssMI	GATC	8 cut(s)	186, 496, 721, 1216, 1405, 1414, 1753, 1801
BssNAI	GTATAC	1 cut(s)	1048
BssT1I	CCWWGG	4 cut(s)	126, 329, 520, 585
Bst1107I	GTATAC	1 cut(s)	1048
Bst2UI	CCWGG	1 cut(s)	438
Bst4CI	ACNGT	3 cut(s)	53, 1550, 1942
Bst6I	CTCTTC	1 cut(s)	126
BstAFI	CTTAAG	1 cut(s)	875
BstBAI	YACGTR	1 cut(s)	392
BstC8I	GCNNGC	5 cut(s)	277, 336, 403, 872, 1528
BstDEI	CTNAG	9 cut(s)	190, 224, 321, 746, 1515, 1606, 1788, 1838, 1844
BstDSI	CCRYGG	2 cut(s)	126, 585
BstENI	CCTNNNNNAGG	1 cut(s)	1837
BstF5I	GGATG	5 cut(s)	371, 527, 565, 867, 1714
BstHHI	GCGC	1 cut(s)	168
BstKTI	GATC	8 cut(s)	189, 499, 724, 1219, 1408, 1417, 1756, 1804
BstMAI	GTCTC	1 cut(s)	1860
BstMBI	GATC	8 cut(s)	186, 496, 721, 1216, 1405, 1414, 1753, 1801
BstNI	CCWGG	1 cut(s)	438
BstNSI	RCATGY	3 cut(s)	818, 1614, 1630
BstSCI	CCNGG	3 cut(s)	436, 1189, 1310
BstSFI	CTRYAG	1 cut(s)	887
BstSLI	GKGCMC	1 cut(s)	329
BstV1I	GCAGC	5 cut(s)	175, 269, 754, 1450, 1687
BstV2I	GAAGAC	2 cut(s)	979, 1472
BstX2I	RGATCY	1 cut(s)	186
BstYI	RGATCY	1 cut(s)	186
BstZ17I	GTATAC	1 cut(s)	1048
Bsu36I	CCTNAGG	1 cut(s)	1838
BsuI	GTATCC	3 cut(s)	394, 836, 1197
BsuRI	GGCC	4 cut(s)	327, 1029, 1315, 1502
BtgI	CCRYGG	2 cut(s)	126, 585
BtsCI	GGATG	5 cut(s)	371, 527, 565, 867, 1714
BtsI	GCAGTG	3 cut(s)	363, 654, 919
BtsIMutI	CAGTG	6 cut(s)	363, 654, 919, 1214, 1483, 1658
BveI	ACCTGC	4 cut(s)	539, 1286, 1359, 1463
Cac8I	GCNNGC	5 cut(s)	277, 336, 403, 872, 1528
CciI	TCATGA	1 cut(s)	1750
CfoI	GCGC	1 cut(s)	168
Cfr10I	RCCGGY	1 cut(s)	1325
Cfr13I	GGNCC	6 cut(s)	325, 326, 516, 1133, 1283, 1313
Csp6I	GTAC	6 cut(s)	393, 661, 1090, 1387, 1492, 1614
CspAI	ACCGGT	1 cut(s)	1325
CviQI	GTAC	6 cut(s)	393, 661, 1090, 1387, 1492, 1614
DdeI	CTNAG	9 cut(s)	190, 224, 321, 746, 1515, 1606, 1788, 1838, 1844
DpnI	GATC	8 cut(s)	188, 498, 723, 1218, 1407, 1416, 1755, 1803
DpnII	GATC	8 cut(s)	186, 496, 721, 1216, 1405, 1414, 1753, 1801
DraI	TTTAAA	1 cut(s)	1096
DraIII	CACNNNGTG	1 cut(s)	692
DriI	GACNNNNNGTC	1 cut(s)	1503
EaeI	YGGCCR	1 cut(s)	1500
Eam1104I	CTCTTC	1 cut(s)	126
Eam1105I	GACNNNNNGTC	1 cut(s)	1503
EarI	CTCTTC	1 cut(s)	126
Eco130I	CCWWGG	4 cut(s)	126, 329, 520, 585
Eco24I	GRGCYC	2 cut(s)	329, 437
Eco32I	GATATC	1 cut(s)	241
Eco47I	GGWCC	3 cut(s)	516, 1133, 1283
Eco57I	CTGAAG	2 cut(s)	647, 902
Eco81I	CCTNAGG	1 cut(s)	1838
Eco88I	CYCGRG	1 cut(s)	1392
EcoNI	CCTNNNNNAGG	1 cut(s)	1837
EcoO109I	RGGNCCY	1 cut(s)	325
EcoRII	CCWGG	1 cut(s)	436
EcoRV	GATATC	1 cut(s)	241
EcoT14I	CCWWGG	4 cut(s)	126, 329, 520, 585
EcoT38I	GRGCYC	2 cut(s)	329, 437
ErhI	CCWWGG	4 cut(s)	126, 329, 520, 585
FalI	AAGNNNNNCTT	2 cut(s)	839, 871
FaqI	GGGAC	4 cut(s)	103, 502, 825, 1275
FauI	CCCGC	1 cut(s)	1519
FbaI	TGATCA	1 cut(s)	1405
FblI	GTMKAC	3 cut(s)	121, 733, 1047
Fnu4HI	GCNGC	7 cut(s)	164, 258, 354, 743, 1464, 1512, 1701
FokI	GGATG	5 cut(s)	358, 514, 552, 874, 1721
FriOI	GRGCYC	2 cut(s)	329, 437
Fsp4HI	GCNGC	7 cut(s)	164, 258, 354, 743, 1464, 1512, 1701
FspBI	CTAG	7 cut(s)	111, 267, 480, 689, 1130, 1430, 1728
GlaI	GCGC	1 cut(s)	167
GluI	GCNGC	7 cut(s)	164, 258, 354, 743, 1464, 1512, 1701
GsaI	CCCAGC	1 cut(s)	283
GsuI	CTGGAG	1 cut(s)	634
HaeIII	GGCC	4 cut(s)	327, 1029, 1315, 1502
HapII	CCGG	5 cut(s)	96, 1030, 1191, 1311, 1326
HhaI	GCGC	1 cut(s)	168
Hin6I	GCGC	1 cut(s)	166
HinP1I	GCGC	1 cut(s)	166
HincII	GTYRAC	3 cut(s)	616, 1521, 1924
HindII	GTYRAC	3 cut(s)	616, 1521, 1924
HindIII	AAGCTT	2 cut(s)	1066, 1603
HinfI	GANTC	4 cut(s)	562, 1117, 1667, 1890
HpaII	CCGG	5 cut(s)	96, 1030, 1191, 1311, 1326
HphI	GGTGA	5 cut(s)	913, 949, 1211, 1358, 1424
Hpy166II	GTNNAC	7 cut(s)	122, 616, 734, 1048, 1521, 1850, 1924
Hpy188I	TCNGA	3 cut(s)	432, 1339, 1672
Hpy188III	TCNNGA	8 cut(s)	77, 293, 725, 983, 1286, 1392, 1751, 1805
Hpy8I	GTNNAC	7 cut(s)	122, 616, 734, 1048, 1521, 1850, 1924
Hpy99I	CGWCG	2 cut(s)	1451, 1576
HpyAV	CCTTC	5 cut(s)	130, 321, 1237, 1279, 1806
HpyCH4III	ACNGT	3 cut(s)	53, 1550, 1942
HpyCH4IV	ACGT	2 cut(s)	391, 640
HpyCH4V	TGCA	8 cut(s)	58, 257, 1295, 1458, 1466, 1545, 1624, 1906
HpyF3I	CTNAG	9 cut(s)	190, 224, 321, 746, 1515, 1606, 1788, 1838, 1844
HpySE526I	ACGT	2 cut(s)	391, 640
HspAI	GCGC	1 cut(s)	166
Ksp22I	TGATCA	1 cut(s)	1405
Kzo9I	GATC	8 cut(s)	186, 496, 721, 1216, 1405, 1414, 1753, 1801
LmnI	GCTCC	5 cut(s)	107, 442, 545, 587, 823
Lsp1109I	GCAGC	5 cut(s)	175, 269, 754, 1450, 1687
LweI	GCATC	1 cut(s)	1566
MaeI	CTAG	7 cut(s)	111, 267, 480, 689, 1130, 1430, 1728
MaeII	ACGT	2 cut(s)	391, 640
MaeIII	GTNAC	5 cut(s)	358, 415, 630, 1103, 1211
MalI	GATC	8 cut(s)	188, 498, 723, 1218, 1407, 1416, 1755, 1803
MboI	GATC	8 cut(s)	186, 496, 721, 1216, 1405, 1414, 1753, 1801
MboII	GAAGA	6 cut(s)	143, 281, 984, 1366, 1472, 1655
MfeI	CAATTG	1 cut(s)	1566
MflI	RGATCY	1 cut(s)	186
MhlI	GDGCHC	3 cut(s)	329, 437, 514
MlyI	GAGTC	1 cut(s)	571
MmeI	TCCRAC	3 cut(s)	480, 517, 1105
MslI	CAYNNNNRTG	1 cut(s)	1112
MspCI	CTTAAG	1 cut(s)	875
MspI	CCGG	5 cut(s)	96, 1030, 1191, 1311, 1326
MspR9I	CCNGG	3 cut(s)	438, 1191, 1312
MunI	CAATTG	1 cut(s)	1566
Mva1269I	GAATGC	3 cut(s)	992, 1702, 1908
MvaI	CCWGG	1 cut(s)	438
NciI	CCSGG	2 cut(s)	1191, 1312
NcoI	CCATGG	2 cut(s)	126, 585
NdeII	GATC	8 cut(s)	186, 496, 721, 1216, 1405, 1414, 1753, 1801
NlaIV	GGNNCC	4 cut(s)	327, 518, 583, 1453
NmuCI	GTSAC	1 cut(s)	358
NspI	RCATGY	3 cut(s)	818, 1614, 1630
PaeR7I	CTCGAG	1 cut(s)	1392
PagI	TCATGA	1 cut(s)	1750
PasI	CCCWGGG	1 cut(s)	437
PciI	ACATGT	1 cut(s)	1626
PctI	GAATGC	3 cut(s)	992, 1702, 1908
PfeI	GAWTC	3 cut(s)	1117, 1667, 1890
PflFI	GACNNNGTC	1 cut(s)	1131
PinAI	ACCGGT	1 cut(s)	1325
PkrI	GCNGC	7 cut(s)	165, 259, 355, 744, 1465, 1513, 1702
PleI	GAGTC	1 cut(s)	570
PpsI	GAGTC	1 cut(s)	570
Ppu21I	YACGTR	1 cut(s)	392
PscI	ACATGT	1 cut(s)	1626
PsiI	TTATAA	2 cut(s)	219, 1305
Psp6I	CCWGG	1 cut(s)	436
PspFI	CCCAGC	1 cut(s)	279
PspGI	CCWGG	1 cut(s)	436
PspN4I	GGNNCC	4 cut(s)	327, 518, 583, 1453
PspOMI	GGGCCC	1 cut(s)	325
PspPI	GGNCC	6 cut(s)	325, 326, 516, 1133, 1283, 1313
PsuI	RGATCY	1 cut(s)	186
PsyI	GACNNNGTC	1 cut(s)	1131
RsaI	GTAC	6 cut(s)	394, 662, 1091, 1388, 1493, 1615
RsaNI	GTAC	6 cut(s)	393, 661, 1090, 1387, 1492, 1614
RseI	CAYNNNNRTG	1 cut(s)	1112
SatI	GCNGC	7 cut(s)	164, 258, 354, 743, 1464, 1512, 1701
Sau3AI	GATC	8 cut(s)	186, 496, 721, 1216, 1405, 1414, 1753, 1801
Sau96I	GGNCC	6 cut(s)	325, 326, 516, 1133, 1283, 1313
ScaI	AGTACT	1 cut(s)	1091
SchI	GAGTC	1 cut(s)	571
ScrFI	CCNGG	3 cut(s)	438, 1191, 1312
SduI	GDGCHC	3 cut(s)	329, 437, 514
SfaNI	GCATC	1 cut(s)	1566
SfcI	CTRYAG	1 cut(s)	887
Sfr274I	CTCGAG	1 cut(s)	1392
SinI	GGWCC	3 cut(s)	516, 1133, 1283
SlaI	CTCGAG	1 cut(s)	1392
SmiMI	CAYNNNNRTG	1 cut(s)	1112
SmlI	CTYRAG	3 cut(s)	505, 875, 1392
SmoI	CTYRAG	3 cut(s)	505, 875, 1392
SsiI	CCGC	5 cut(s)	353, 1183, 1344, 1511, 1526
SspMI	CTAG	7 cut(s)	111, 267, 480, 689, 1130, 1430, 1728
StyD4I	CCNGG	3 cut(s)	436, 1189, 1310
StyI	CCWWGG	4 cut(s)	126, 329, 520, 585
TaaI	ACNGT	3 cut(s)	53, 1550, 1942
TaiI	ACGT	2 cut(s)	394, 643
TaqI	TCGA	2 cut(s)	1393, 1446
TaqII	GACCGA	2 cut(s)	504, 1814
TatI	WGTACW	2 cut(s)	1089, 1613
TauI	GCSGC	2 cut(s)	356, 1514
TfiI	GAWTC	3 cut(s)	1117, 1667, 1890
TscAI	CASTG	6 cut(s)	363, 661, 926, 1214, 1490, 1665
TseFI	GTSAC	1 cut(s)	358
TseI	GCWGC	5 cut(s)	163, 257, 742, 1463, 1700
Tsp45I	GTSAC	1 cut(s)	358
TspDTI	ATGAA	9 cut(s)	354, 516, 719, 984, 1244, 1335, 1605, 1656, 1864
TspGWI	ACGGA	3 cut(s)	217, 1125, 1464
TspRI	CASTG	6 cut(s)	363, 661, 926, 1214, 1490, 1665
Tth111I	GACNNNGTC	1 cut(s)	1131
Vha464I	CTTAAG	1 cut(s)	875
VpaK11BI	GGWCC	3 cut(s)	516, 1133, 1283
XagI	CCTNNNNNAGG	1 cut(s)	1837
XapI	RAATTY	1 cut(s)	1880
XceI	RCATGY	3 cut(s)	818, 1614, 1630
XcmI	CCANNNNNNNNNTGG	1 cut(s)	926
XhoI	CTCGAG	1 cut(s)	1392
XmiI	GTMKAC	3 cut(s)	121, 733, 1047
XspI	CTAG	7 cut(s)	111, 267, 480, 689, 1130, 1430, 1728
ZrmI	AGTACT	1 cut(s)	1091

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.