Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003115.1

Orthogroup ID

OG0009387

Physical Location & Seq

Genomic Coordinates Reverse (-)

156047 .. 161142

Gene Structure 5096 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003115.1_g000036.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2361 bp

atgctcgcacgctttctcccttctcctcctccgccccgacccgacccgaccgtctccgccctcttccgtcctcctctctccggggcccggttcgtttcggttaaaccaacctgcgctaggtctccggccgccggaatttcgagtttctggagaagaattgagcacggatcgggtgctttgagctccgaaagagcacgaggaagtggaatcggaggagtttttggccggagtagagtcaattggaggttcagttttgaggggattatggcgacagatattcagaggttaattgggacgagtgaagaagatgatgaggaagaaatggacatggatgtgaaagaagagggagatggtgatgatgacgaagatgttgagaagcatgttgattcgaccccgatgatgatcggggttgatggagggatggcaacaagtagttgtaataataaccggtttcaacagcaccagcaaatgcaagaagtggggacccctggtgggggaggagctaggaggtgtagaccgttagaagagaaagagagaaccaagataagagagcggcagcgcagggcgatcactgcaaagatcttagcagggctacggaggcatggaaattataatctcagagtcagggctgatatcaatgatgtaattgcggctttggctagggaagctggctgggttgttcttccggatggaaccacttatccttcaaactctcagggcccaaggcctgctggtgtcagttctacagcggccacttcatcatcttcccaaatgatgtcccaaacaactccggtgtcccttaaaggagttacctctggctatcaaagctctgtggagcataatgcaggtctgccaggtcacatgaaaagtgtttttatgcctgcttcatcaccttatgatcttccatcaatcatcacaggagatggaggagatcaaacacagagtcatcctcttattggtggctccatggataatgttggggacaagcagattgttgacatgccccagaagttaccagaacgtgattttgccaacacggcttacattccagtttatgttatgctgccactaggtgtcattaatatgaagtgtgaactggttgatccagatggtctattaaagcagctaagggtattgaaatcagttaatgttgatggtgttatggttgattgctggtgggggatagtagagggacatgctccactggagtataactggaatggatataagagactctttcagatggtgcgcgacctaaagctgaagttgcaggttgtgatgtcgtttcatgaatgtggaggcaatgtgggtgatgatgtatgtattacactaccccattgggtggctgaaattggtagaagtaaccctgacatatttttcactgatagagcaggaagacgtaaccctgaatgcctatcatggggaatagacaaggaacgagttttaagaggccggactgctgttgaggtatactttgactgcatgagaagcttccgtgtagagtttgacgagttctttcaagatggcattatctccatgattcaagttggactaggtccatgtggcgaactaagattcccatcttgtactgtaaagcatggttggcgatatccaggcattggtgaatttcagtgttacgatcagtatttgctgaaaagtctgagaaaggcagcagaagcaaggggacactccttctggggtagaggtccagataatgcaggttcttataattctcggccacatgaatccggtttcttttgcgatggaggagattatgatggctactatggcaggttcttccttaattggtactcccgagttttagttgatcatggtgatcgagtgctttctctagcaaagctagcgtttgacggcacctgcattgctgcaaagctatcaggtattcactggtggtacaagacacctagtcatgctgctgagctgactgctggcttctataatccatgcaaccgagatggttatgctgcaattatgatgatgctaaagaagcatggtgcttctttaaacctcgtatgcactcaattgcatacgttagaccagaatattgacttccaagaggcaatgggagatcctgagggtttattttggcaagtgctgaatgctgcatgggatgtttgcgtaccagtttctagtgagaatgctcttttatgtcatagtcgtgtcggatacaacaagatattggataattccaagcccttgactgatccagatggaaggcatttgtcatcttttacctaccttaggctcagtccgcttctaatggaaagacataacttcatggaatttgaccgatttgttaagagaatgcatggggaagctgttcttgatctccatgtatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0016160 GO:0016161 GO:0016787 GO:0016798 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00500 map00500

Pfam Domains

Protein Families

BES1_N Glyco_hydro_14

Protein Analysis

786

Amino Acids

87.44

Weight (kDa)

6.17

Isoelectric Point (pI)

43.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009387)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45880
fragaria_vesca	FvH4_7g14210 FvH4_7g14210 FvH4_7g14210
malus_domestica	MD01G1059300.v1.1 MD07G1138200.v1.1
prunus_persica	Prupe.2G169900_v2.0.a1 Prupe.2G169900_v2.0.a1
pyrus_communis	pycom07g13560
rosa_chinensis	RchiOBHm_Chr1g0355141
rosa_laevigata	RLG00000028174
rosa_multiflora	Rmu_sc0003115.1_g000036 Rmu_sc0004488.1_g000006
rosa_roxburghii	Rroxscaffold_4G00300640
rosa_rugosa	Rorug01G0245400 Rorug01G0245500 Rorug01G0245600
rosa_samantha	Rh1AG257700 Rh1BG227200 Rh1CG241300 Rh1DG254900
rosa_wichuraiana	Rw1G022740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	612, 1728
AarI	CACCTGC	1 cut(s)	1886
AasI	GACNNNNNNGTC	1 cut(s)	50
Acc36I	ACCTGC	6 cut(s)	119, 836, 1261, 1709, 1782, 1886
AccB1I	GGYRCC	1 cut(s)	1874
AccB7I	CCANNNNNTGG	2 cut(s)	1342, 1619
AccBSI	CCGCTC	1 cut(s)	553
AccI	GTMKAC	2 cut(s)	514, 1470
AccII	CGCG	1 cut(s)	1251
AccIII	TCCGGA	1 cut(s)	685
AciI	CCGC	7 cut(s)	32, 57, 129, 553, 650, 749, 2273
AclWI	GGATC	4 cut(s)	175, 1097, 2084, 2219
AcoI	YGGCCR	4 cut(s)	126, 223, 750, 1736
AcsI	RAATTY	3 cut(s)	135, 1625, 2303
AcuI	CTGAAG	1 cut(s)	1283
AdeI	CACNNNGTG	1 cut(s)	1073
AfaI	GTAC	4 cut(s)	1588, 1811, 1916, 2142
AgeI	ACCGGT	1 cut(s)	447
AgsI	TTSAA	5 cut(s)	455, 708, 1138, 1520, 1544
AhdI	GACNNNNNGTC	1 cut(s)	1926
AjnI	CCWGG	3 cut(s)	487, 853, 1612
AloI	GAACNNNNNNTCC	4 cut(s)	685, 717, 1560, 1592
Alw21I	GWGCWC	3 cut(s)	165, 185, 196
Alw26I	GTCTC	3 cut(s)	58, 126, 1225
AlwI	GGATC	4 cut(s)	175, 1097, 2084, 2219
Ama87I	CYCGRG	1 cut(s)	1815
Aor13HI	TCCGGA	1 cut(s)	685
AoxI	GGCC	8 cut(s)	84, 126, 223, 718, 725, 750, 1450, 1736
ApaI	GGGCCC	2 cut(s)	88, 722
ApeKI	GCWGC	8 cut(s)	556, 1063, 1123, 1670, 1886, 1934, 1985, 2123
ApoI	RAATTY	3 cut(s)	135, 1625, 2303
ArsI	GACNNNNNNTTYG	2 cut(s)	928, 960
AseI	ATTAAT	1 cut(s)	1080
AsiGI	ACCGGT	1 cut(s)	447
Asp700I	GAANNNNTTC	1 cut(s)	2340
AspLEI	GCGC	3 cut(s)	116, 561, 1251
AspS9I	GGNCC	7 cut(s)	84, 85, 483, 718, 719, 1556, 1706
AsuC2I	CCSGG	2 cut(s)	82, 88
AsuHPI	GGTGA	5 cut(s)	365, 882, 1322, 1634, 1847
AsuNHI	GCTAGC	1 cut(s)	1861
AvaI	CYCGRG	1 cut(s)	1815
AvaII	GGWCC	3 cut(s)	483, 1556, 1706
AxyI	CCTNAGG	2 cut(s)	2094, 2261
BaeGI	GKGCMC	2 cut(s)	88, 722
BanI	GGYRCC	1 cut(s)	1874
BanII	GRGCYC	3 cut(s)	88, 185, 722
BauI	CACGAG	1 cut(s)	195
BbsI	GAAGAC	1 cut(s)	1402
Bbv12I	GWGCWC	3 cut(s)	165, 185, 196
BbvI	GCAGC	8 cut(s)	568, 1050, 1135, 1682, 1873, 1921, 1972, 2110
BceAI	ACGGC	2 cut(s)	1053, 1888
BciT130I	CCWGG	3 cut(s)	489, 855, 1614
BciVI	GTATCC	1 cut(s)	2180
BclI	TGATCA	1 cut(s)	1828
BcnI	CCSGG	2 cut(s)	82, 88
BcoDI	GTCTC	3 cut(s)	58, 126, 1225
BfaI	CTAG	9 cut(s)	117, 504, 660, 1070, 1553, 1853, 1862, 1926, 2151
BfmI	CTRYAG	1 cut(s)	744
BfuAI	ACCTGC	6 cut(s)	119, 836, 1261, 1709, 1782, 1886
BfuI	GTATCC	1 cut(s)	2180
BglI	GCCNNNNNGGC	1 cut(s)	1037
BglII	AGATCT	1 cut(s)	579
BlpI	GCTNAGC	1 cut(s)	1938
Bme1390I	CCNGG	5 cut(s)	82, 88, 489, 855, 1614
Bme18I	GGWCC	3 cut(s)	483, 1556, 1706
BmeRI	GACNNNNNGTC	1 cut(s)	1926
BmeT110I	CYCGRG	1 cut(s)	1815
BmgT120I	GGNCC	7 cut(s)	84, 85, 483, 718, 719, 1556, 1706
BmiI	GGNNCC	8 cut(s)	85, 86, 484, 485, 694, 720, 964, 1876
BmrFI	CCNGG	5 cut(s)	82, 88, 489, 855, 1614
BmsI	GCATC	1 cut(s)	1989
BmtI	GCTAGC	1 cut(s)	1865
BpiI	GAAGAC	1 cut(s)	1402
BplI	GAGNNNNNCTC	2 cut(s)	934, 966
BpmI	CTGGAG	2 cut(s)	169, 1226
Bpu10I	CCTNAGC	1 cut(s)	1127
Bpu1102I	GCTNAGC	1 cut(s)	1938
BpuMI	CCSGG	2 cut(s)	82, 88
BsaBI	GATNNNNATC	2 cut(s)	401, 1579
BsaI	GGTCTC	1 cut(s)	126
BsaJI	CCNNGG	4 cut(s)	81, 487, 722, 966
BsaWI	WCCGGW	4 cut(s)	447, 685, 790, 1748
BsaXI	ACNNNNNCTCC	5 cut(s)	30, 235, 265, 1290, 1320
Bse118I	RCCGGY	1 cut(s)	447
Bse1I	ACTGG	6 cut(s)	1049, 1101, 1209, 1220, 1913, 2144
Bse21I	CCTNAGG	2 cut(s)	2094, 2261
Bse3DI	GCAATG	3 cut(s)	1309, 1881, 2088
Bse8I	GATNNNNATC	2 cut(s)	401, 1579
BseAI	TCCGGA	1 cut(s)	685
BseBI	CCWGG	3 cut(s)	489, 855, 1614
BseDI	CCNNGG	4 cut(s)	81, 487, 722, 966
BseGI	GGATG	5 cut(s)	337, 426, 694, 946, 2137
BseJI	GATNNNNATC	2 cut(s)	401, 1579
BseMI	GCAATG	3 cut(s)	1309, 1881, 2088
BseMII	CTCAG	6 cut(s)	631, 728, 1652, 1929, 2085, 2281
BseNI	ACTGG	6 cut(s)	1049, 1101, 1209, 1220, 1913, 2144
BseRI	GAGGAG	7 cut(s)	15, 18, 63, 228, 513, 942, 1782
BseSI	GKGCMC	2 cut(s)	88, 722
BseX3I	CGGCCG	1 cut(s)	126
BseXI	GCAGC	8 cut(s)	568, 1050, 1135, 1682, 1873, 1921, 1972, 2110
BseYI	CCCAGC	1 cut(s)	672
Bsh1236I	CGCG	1 cut(s)	1251
Bsh1285I	CGRYCG	2 cut(s)	51, 129
BshFI	GGCC	8 cut(s)	86, 128, 225, 720, 727, 752, 1452, 1738
BshNI	GGYRCC	1 cut(s)	1874
BshTI	ACCGGT	1 cut(s)	447
BsiEI	CGRYCG	2 cut(s)	51, 129
BsiHKAI	GWGCWC	3 cut(s)	165, 185, 196
BsiHKCI	CYCGRG	1 cut(s)	1815
BslFI	GGGAC	7 cut(s)	307, 496, 763, 781, 995, 1206, 1698
BsmAI	GTCTC	3 cut(s)	58, 126, 1225
BsmBI	CGTCTC	1 cut(s)	58
BsmFI	GGGAC	7 cut(s)	307, 496, 763, 781, 995, 1206, 1698
BsmI	GAATGC	4 cut(s)	1415, 2125, 2164, 2331
BsnI	GGCC	8 cut(s)	86, 128, 225, 720, 727, 752, 1452, 1738
Bso31I	GGTCTC	1 cut(s)	126
BsoBI	CYCGRG	1 cut(s)	1815
Bsp120I	GGGCCC	2 cut(s)	84, 718
Bsp1286I	GDGCHC	5 cut(s)	88, 165, 185, 196, 722
Bsp13I	TCCGGA	1 cut(s)	685
Bsp1720I	GCTNAGC	1 cut(s)	1938
Bsp19I	CCATGG	1 cut(s)	966
BspACI	CCGC	7 cut(s)	32, 57, 129, 553, 650, 749, 2273
BspANI	GGCC	8 cut(s)	86, 128, 225, 720, 727, 752, 1452, 1738
BspCNI	CTCAG	6 cut(s)	630, 727, 1653, 1930, 2086, 2280
BspEI	TCCGGA	1 cut(s)	685
BspFNI	CGCG	1 cut(s)	1251
BspHI	TCATGA	1 cut(s)	1288
BspLI	GGNNCC	8 cut(s)	85, 86, 484, 485, 694, 720, 964, 1876
BspMI	ACCTGC	6 cut(s)	119, 836, 1261, 1709, 1782, 1886
BspOI	GCTAGC	1 cut(s)	1865
BspPI	GGATC	4 cut(s)	175, 1097, 2084, 2219
BspT107I	GGYRCC	1 cut(s)	1874
BspTNI	GGTCTC	1 cut(s)	126
BsrBI	CCGCTC	1 cut(s)	553
BsrDI	GCAATG	3 cut(s)	1309, 1881, 2088
BsrFI	RCCGGY	1 cut(s)	447
BsrI	ACTGG	6 cut(s)	1049, 1101, 1209, 1220, 1913, 2144
BssAI	RCCGGY	1 cut(s)	447
BssECI	CCNNGG	4 cut(s)	81, 487, 722, 966
BssNAI	GTATAC	1 cut(s)	1471
BssSI	CACGAG	1 cut(s)	195
BssT1I	CCWWGG	2 cut(s)	722, 966
Bst1107I	GTATAC	1 cut(s)	1471
Bst2BI	CACGAG	1 cut(s)	195
Bst2UI	CCWGG	3 cut(s)	489, 855, 1614
Bst4CI	ACNGT	3 cut(s)	52, 519, 1591
Bst6I	CTCTTC	3 cut(s)	68, 336, 519
BstC8I	GCNNGC	7 cut(s)	6, 10, 670, 729, 882, 1863, 1951
BstDSI	CCRYGG	1 cut(s)	966
BstENI	CCTNNNNNAGG	2 cut(s)	115, 2260
BstF5I	GGATG	5 cut(s)	337, 426, 694, 946, 2137
BstFNI	CGCG	1 cut(s)	1251
BstHHI	GCGC	3 cut(s)	116, 561, 1251
BstMAI	GTCTC	3 cut(s)	58, 126, 1225
BstMCI	CGRYCG	2 cut(s)	51, 129
BstNI	CCWGG	3 cut(s)	489, 855, 1614
BstNSI	RCATGY	3 cut(s)	383, 1003, 1199
BstSCI	CCNGG	5 cut(s)	80, 86, 487, 853, 1612
BstSFI	CTRYAG	1 cut(s)	744
BstSLI	GKGCMC	2 cut(s)	88, 722
BstUI	CGCG	1 cut(s)	1251
BstV1I	GCAGC	8 cut(s)	568, 1050, 1135, 1682, 1873, 1921, 1972, 2110
BstV2I	GAAGAC	1 cut(s)	1402
BstX2I	RGATCY	2 cut(s)	579, 2089
BstYI	RGATCY	2 cut(s)	579, 2089
BstZ17I	GTATAC	1 cut(s)	1471
BstZI	CGGCCG	1 cut(s)	126
Bsu36I	CCTNAGG	2 cut(s)	2094, 2261
BsuI	GTATCC	1 cut(s)	2180
BsuRI	GGCC	8 cut(s)	86, 128, 225, 720, 727, 752, 1452, 1738
BtgI	CCRYGG	1 cut(s)	966
BtgZI	GCGATG	1 cut(s)	1776
BtsCI	GGATG	5 cut(s)	337, 426, 694, 946, 2137
BtsI	GCAGTG	1 cut(s)	570
BtsIMutI	CAGTG	5 cut(s)	570, 1202, 1380, 1637, 1906
BveI	ACCTGC	6 cut(s)	119, 836, 1261, 1709, 1782, 1886
Cac8I	GCNNGC	7 cut(s)	6, 10, 670, 729, 882, 1863, 1951
CciI	TCATGA	1 cut(s)	1288
CfoI	GCGC	3 cut(s)	116, 561, 1251
Cfr10I	RCCGGY	1 cut(s)	447
Cfr13I	GGNCC	7 cut(s)	84, 85, 483, 718, 719, 1556, 1706
Csp6I	GTAC	4 cut(s)	1587, 1810, 1915, 2141
CspAI	ACCGGT	1 cut(s)	447
CviQI	GTAC	4 cut(s)	1587, 1810, 1915, 2141
DraI	TTTAAA	1 cut(s)	2025
DraIII	CACNNNGTG	1 cut(s)	1073
DrdI	GACNNNNNNGTC	1 cut(s)	50
DriI	GACNNNNNGTC	1 cut(s)	1926
DseDI	GACNNNNNNGTC	1 cut(s)	50
EaeI	YGGCCR	4 cut(s)	126, 223, 750, 1736
EagI	CGGCCG	1 cut(s)	126
Eam1104I	CTCTTC	3 cut(s)	68, 336, 519
Eam1105I	GACNNNNNGTC	1 cut(s)	1926
EarI	CTCTTC	3 cut(s)	68, 336, 519
EciI	GGCGGA	2 cut(s)	21, 46
Ecl136II	GAGCTC	1 cut(s)	183
EclXI	CGGCCG	1 cut(s)	126
Eco130I	CCWWGG	2 cut(s)	722, 966
Eco147I	AGGCCT	1 cut(s)	727
Eco24I	GRGCYC	3 cut(s)	88, 185, 722
Eco31I	GGTCTC	1 cut(s)	126
Eco32I	GATATC	2 cut(s)	634, 1610
Eco47I	GGWCC	3 cut(s)	483, 1556, 1706
Eco52I	CGGCCG	1 cut(s)	126
Eco53kI	GAGCTC	1 cut(s)	183
Eco57I	CTGAAG	1 cut(s)	1283
Eco81I	CCTNAGG	2 cut(s)	2094, 2261
Eco88I	CYCGRG	1 cut(s)	1815
EcoICRI	GAGCTC	1 cut(s)	183
EcoNI	CCTNNNNNAGG	2 cut(s)	115, 2260
EcoO109I	RGGNCCY	3 cut(s)	84, 483, 718
EcoRII	CCWGG	3 cut(s)	487, 853, 1612
EcoRV	GATATC	2 cut(s)	634, 1610
EcoT14I	CCWWGG	2 cut(s)	722, 966
EcoT22I	ATGCAT	1 cut(s)	2331
EcoT38I	GRGCYC	3 cut(s)	88, 185, 722
ErhI	CCWWGG	2 cut(s)	722, 966
Esp3I	CGTCTC	1 cut(s)	58
FalI	AAGNNNNNCTT	4 cut(s)	1220, 1252, 2328, 2360
FaqI	GGGAC	7 cut(s)	307, 496, 763, 781, 995, 1206, 1698
FbaI	TGATCA	1 cut(s)	1828
FblI	GTMKAC	2 cut(s)	514, 1470
FokI	GGATG	5 cut(s)	344, 433, 701, 933, 2144
FriOI	GRGCYC	3 cut(s)	88, 185, 722
FspBI	CTAG	9 cut(s)	117, 504, 660, 1070, 1553, 1853, 1862, 1926, 2151
GlaI	GCGC	3 cut(s)	115, 560, 1250
GsaI	CCCAGC	1 cut(s)	676
GsuI	CTGGAG	2 cut(s)	169, 1226
HaeIII	GGCC	8 cut(s)	86, 128, 225, 720, 727, 752, 1452, 1738
HhaI	GCGC	3 cut(s)	116, 561, 1251
Hin6I	GCGC	3 cut(s)	114, 559, 1249
HinP1I	GCGC	3 cut(s)	114, 559, 1249
HincII	GTYRAC	1 cut(s)	997
HindII	GTYRAC	1 cut(s)	997
HindIII	AAGCTT	1 cut(s)	1489
HinfI	GANTC	9 cut(s)	207, 234, 386, 621, 943, 1233, 1540, 1575, 1745
HphI	GGTGA	5 cut(s)	365, 882, 1322, 1634, 1847
Hpy166II	GTNNAC	4 cut(s)	515, 997, 1094, 1471
Hpy188I	TCNGA	7 cut(s)	187, 212, 282, 620, 1242, 1662, 2186
Hpy8I	GTNNAC	4 cut(s)	515, 997, 1094, 1471
HpyAV	CCTTC	4 cut(s)	30, 714, 1702, 2229
HpyCH4III	ACNGT	3 cut(s)	52, 519, 1591
HpyCH4IV	ACGT	3 cut(s)	1021, 1399, 2051
HpySE526I	ACGT	3 cut(s)	1021, 1399, 2051
HspAI	GCGC	3 cut(s)	114, 559, 1249
KflI	GGGWCCC	1 cut(s)	483
Kpn2I	TCCGGA	1 cut(s)	685
Ksp22I	TGATCA	1 cut(s)	1828
LmnI	GCTCC	5 cut(s)	188, 500, 835, 968, 1204
Lsp1109I	GCAGC	8 cut(s)	568, 1050, 1135, 1682, 1873, 1921, 1972, 2110
LweI	GCATC	1 cut(s)	1989
MaeI	CTAG	9 cut(s)	117, 504, 660, 1070, 1553, 1853, 1862, 1926, 2151
MaeII	ACGT	3 cut(s)	1021, 1399, 2051
MaeIII	GTNAC	6 cut(s)	808, 857, 1011, 1361, 1400, 1634
MbiI	CCGCTC	1 cut(s)	553
MfeI	CAATTG	2 cut(s)	238, 2042
MflI	RGATCY	2 cut(s)	579, 2089
MhlI	GDGCHC	5 cut(s)	88, 165, 185, 196, 722
MlyI	GAGTC	4 cut(s)	243, 630, 952, 1227
MmeI	TCCRAC	2 cut(s)	1528, 2164
Mph1103I	ATGCAT	1 cut(s)	2331
MroI	TCCGGA	1 cut(s)	685
MroXI	GAANNNNTTC	1 cut(s)	2340
MslI	CAYNNNNRTG	4 cut(s)	332, 1082, 1293, 2178
MspA1I	CMGCKG	1 cut(s)	749
MspR9I	CCNGG	5 cut(s)	82, 88, 489, 855, 1614
MunI	CAATTG	2 cut(s)	238, 2042
Mva1269I	GAATGC	4 cut(s)	1415, 2125, 2164, 2331
MvaI	CCWGG	3 cut(s)	489, 855, 1614
MvnI	CGCG	1 cut(s)	1251
NciI	CCSGG	2 cut(s)	82, 88
NcoI	CCATGG	1 cut(s)	966
NheI	GCTAGC	1 cut(s)	1861
NlaIV	GGNNCC	8 cut(s)	85, 86, 484, 485, 694, 720, 964, 1876
NmeAIII	GCCGAG	1 cut(s)	1714
NmuCI	GTSAC	1 cut(s)	857
NsiI	ATGCAT	1 cut(s)	2331
NspI	RCATGY	3 cut(s)	383, 1003, 1199
PagI	TCATGA	1 cut(s)	1288
PaqCI	CACCTGC	1 cut(s)	1886
PceI	AGGCCT	1 cut(s)	727
PctI	GAATGC	4 cut(s)	1415, 2125, 2164, 2331
PdmI	GAANNNNTTC	1 cut(s)	2340
PfeI	GAWTC	5 cut(s)	207, 386, 1540, 1575, 1745
PflFI	GACNNNGTC	1 cut(s)	1554
PflMI	CCANNNNNTGG	2 cut(s)	1342, 1619
PinAI	ACCGGT	1 cut(s)	447
PleI	GAGTC	4 cut(s)	242, 629, 951, 1227
PpsI	GAGTC	4 cut(s)	242, 629, 951, 1227
PpuMI	RGGWCCY	1 cut(s)	483
PshBI	ATTAAT	1 cut(s)	1080
PsiI	TTATAA	2 cut(s)	612, 1728
Psp124BI	GAGCTC	1 cut(s)	185
Psp5II	RGGWCCY	1 cut(s)	483
Psp6I	CCWGG	3 cut(s)	487, 853, 1612
PspFI	CCCAGC	1 cut(s)	672
PspGI	CCWGG	3 cut(s)	487, 853, 1612
PspN4I	GGNNCC	8 cut(s)	85, 86, 484, 485, 694, 720, 964, 1876
PspOMI	GGGCCC	2 cut(s)	84, 718
PspPI	GGNCC	7 cut(s)	84, 85, 483, 718, 719, 1556, 1706
PspPPI	RGGWCCY	1 cut(s)	483
PsuI	RGATCY	2 cut(s)	579, 2089
PsyI	GACNNNGTC	1 cut(s)	1554
RsaI	GTAC	4 cut(s)	1588, 1811, 1916, 2142
RsaNI	GTAC	4 cut(s)	1587, 1810, 1915, 2141
RseI	CAYNNNNRTG	4 cut(s)	332, 1082, 1293, 2178
SacI	GAGCTC	1 cut(s)	185
Sau96I	GGNCC	7 cut(s)	84, 85, 483, 718, 719, 1556, 1706
SchI	GAGTC	4 cut(s)	243, 630, 952, 1227
ScrFI	CCNGG	5 cut(s)	82, 88, 489, 855, 1614
SduI	GDGCHC	5 cut(s)	88, 165, 185, 196, 722
SfaNI	GCATC	1 cut(s)	1989
SfcI	CTRYAG	1 cut(s)	744
SinI	GGWCC	3 cut(s)	483, 1556, 1706
SmiMI	CAYNNNNRTG	4 cut(s)	332, 1082, 1293, 2178
SseBI	AGGCCT	1 cut(s)	727
SsiI	CCGC	7 cut(s)	32, 57, 129, 553, 650, 749, 2273
SspI	AATATT	1 cut(s)	2065
SspMI	CTAG	9 cut(s)	117, 504, 660, 1070, 1553, 1853, 1862, 1926, 2151
SstI	GAGCTC	1 cut(s)	185
StuI	AGGCCT	1 cut(s)	727
StyD4I	CCNGG	5 cut(s)	80, 86, 487, 853, 1612
StyI	CCWWGG	2 cut(s)	722, 966
TaaI	ACNGT	3 cut(s)	52, 519, 1591
TaiI	ACGT	3 cut(s)	1024, 1402, 2054
TaqI	TCGA	3 cut(s)	140, 389, 1840
TaqII	GACCGA	1 cut(s)	2325
TatI	WGTACW	1 cut(s)	1586
TauI	GCSGC	4 cut(s)	131, 556, 653, 752
TfiI	GAWTC	5 cut(s)	207, 386, 1540, 1575, 1745
TscAI	CASTG	5 cut(s)	577, 1209, 1387, 1637, 1913
TseFI	GTSAC	1 cut(s)	857
TseI	GCWGC	8 cut(s)	556, 1063, 1123, 1670, 1886, 1934, 1985, 2123
Tsp45I	GTSAC	1 cut(s)	857
TspDTI	ATGAA	8 cut(s)	747, 876, 878, 1100, 1277, 1305, 1758, 2287
TspGWI	ACGGA	4 cut(s)	56, 180, 610, 1484
TspRI	CASTG	5 cut(s)	577, 1209, 1387, 1637, 1913
Tth111I	GACNNNGTC	1 cut(s)	1554
Van91I	CCANNNNNTGG	2 cut(s)	1342, 1619
VpaK11BI	GGWCC	3 cut(s)	483, 1556, 1706
VspI	ATTAAT	1 cut(s)	1080
XagI	CCTNNNNNAGG	2 cut(s)	115, 2260
XapI	RAATTY	3 cut(s)	135, 1625, 2303
XceI	RCATGY	3 cut(s)	383, 1003, 1199
XmiI	GTMKAC	2 cut(s)	514, 1470
XmnI	GAANNNNTTC	1 cut(s)	2340
XspI	CTAG	9 cut(s)	117, 504, 660, 1070, 1553, 1853, 1862, 1926, 2151
Zsp2I	ATGCAT	1 cut(s)	2331

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.