Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0012444

Physical Location & Seq

Genomic Coordinates Reverse (-)

62245 .. 66111

Gene Structure 3867 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G01180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2379 bp

ATGGCATCAGTTGCCGAGAGCTCTTTTCCTCTTCTCTGTCAAATCAAGACTCAGCGTCGCATCAATTCCTCTACGCTGAGGCATTCCCGTGTTTCTTACCATGATTTGCCTTCTGGCTCGCTGTCTTTTCGTTCTCGGAGCTTTGTTCTGGGACATCGATGCAAGTGTGTGAGCCGCGTCGAGGCTTCCGGCTCAGACGATGATGAGCCAGAGGATGCGCTTCAGGCTACCATTGACAAGAGCAAGAAGGTTCTTGCTATGCAAAGGAACCTTCTTCACCAGATTGCTGAAAGGAGGAAGCTGGTCTCATCTATTAAAGAGAGCACACCTGACTTGGATGATGCAAAAGCTTCTTCCAAACAAGAGTCTGCTTCTTCTGTGAATGCTAATACTGATGCTACTAAAAAAGAAATTATGGATGGAGATGCAAACGGTAGTGTTAGTCCAAGCACTTATGGCAAGTCATCTTTAAGTAAAGAACCAGAAGCTAAGACTTTCTCTCCCAGTACTGAATCCTTGAAGAACCGCAAACAAAGCTCGGCCTCTGTGATATCTTCTTCCCCTGTAACCTCTCCTCAGAAACCATCCGATGTAGCCACTAATGGGAAGCCTTGGTCTAGCGTAGTAGCGTCTAGTGTAGATCCTCCTTATAAACCTTCATCTGTTATGACCTCTCCTGAGAAAACTTCTGATCCTGTAACTTCTCCTGGAAAGCCAAGTAAATCTCGCGCTGGTGCATTTTGGTCAGATCCACTACCGTCTTATCTGACTAAAGCTCCTCAAACATCAACTATGAAGACAGAGAAGTACGTGGAAAAAACACCTGACGTAGCTAGTAGTGAAACTAACGAACCTGGCAAGGATGAAGAGAAGCCGCCTCCACTGGCTGGAGCAAATGTCATGAATGTGATATTGGTAGCAGCAGAGTGTGCTCCATTTTCGAAAACAGGTGGCCTTGGAGATGTAGCTGGTGCTTTACCAAAGTCTTTGGCTAGGCGTGGACACAGGGTTATGGTTGTGGTTCCTCGGTATGCCGAGTATGCTGAAGCCAAAGATTTAGGGGTACGGAAGAGATATAAGGTGGCCGGGCAGGATATGGAAGTAATGTACTTCCATGCATTTATAGATGGTGTGGATTTTGTTTTCATTGATAGCCCTGAATTTCGGCATCTGAGTAATAACATTTATGGTGGAAACCGACTTGATATCTTGAAGCGGATGGTTTTATTTTGCAAGGCTGCTGTTGAGGTTCCGTGGTATGTTCCTTGTGGAGGTGTGTGTTATGGTGATGGAAATTTGGCTTTTATAGCAAATGATTGGCACACTGCGTTACTACCGGTGTACCTGAAGGCCTATTACCGGGATCACGGAATAATGAAATACACACGATCTGTTCTTGTAATTCATAACATTGCTCATCAGGGGCGGGGACCGGTAGATGATTTCTCCTACGTGGATTTACCGAGCCATTACTTGGATAGCTTCAAGTTATATGACCCAGTAGGAGGTGAGCACTTCAATATTTTTGCAGCTGGTCTAAAAGCTGCGGATAGAGTTCTCACTGTTAGCCATGGATACTCCTGGGAGGTTAAGACCTTAGAAGGAGGTTGGGGTCTGCATAACATCATAAATGAAAACGACTGGAAATTTAGAGGAATTGTGAACGGTATCGATACACAAGAATGGAACCCAGAATTTGATACTTACTTGCACTCTGATGATTATACCAACTATTCCTTGGAGAATCTTCACATTGGTAAACCCCAATGTAAAGCTGCATTACAGAAAGAGCTCGGTTTGCCTGTTCGGCCTGATGTTCCGCTGATCGGTTTTATTGGAAGATTGGATCACCAGAAAGGTGTTGATTTGATAGCTGAGGCGGTTCCATGGATGATGAGTCAGGATGTTCAGCTGGTTATGTTAGGCACAGGGCGACCGGATCTTGAAGAGGTCCTCAGACAAATGGAGCATCAATATCGAGATAAAGCACGGGGATGGGTTGGATTCTCGGTTAAAACAGCACACAGAATAACAGCTGGTGCAGACATATTGCTGATGCCTTCTAGATTTGAGCCGTGTGGTCTAAACCAGCTTTACGCAATGAACTATGGAACCATTCCGGTGGTCCATGCCGTGGGAGGATTGAGGGATACAGTTCAACAATTTGATCCCTATAGTGAAACGGGTCTTGGTTGGACATTTGATAGCGCGGAAGCAGGTAAGTTGATTCATGCCTTAGGAAACTGTTTGTTGACATATAGAGAGTATAAGGAGAGTTGGGAAGGGCTTCAGAGAAGAGGAATGACACAGGATTTGAGTTGGGATAATGCTGCAGAGAAGTACGAAGAAGTTCTTGTTGCTGCTAAGTATCATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0006073 GO:0008150 GO:0008152 GO:0009011 GO:0009058 GO:0009059 GO:0009250 GO:0009501 GO:0009507 GO:0009536 GO:0009987 GO:0010021 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0019252 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0071704 GO:1901135 GO:1901137 GO:1901576 GO:2000896

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 map00500 map01100 map01110 map02026

Pfam Domains

Protein Families

Glyco_trans_1_4 Glyco_transf_5 Glycos_transf_1

Protein Analysis

792

Amino Acids

87.59

Weight (kDa)

6.47

Isoelectric Point (pI)

43.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_5	PF08323	302 - 544	2.8e-59	Starch synthase catalytic domain
Glycos_transf_1	PF00534	604 - 728	1e-14	Glycosyl transferases group 1
GT4-conflict	PF20706	605 - 780	7.6e-06	Family 4 Glycosyltransferase in conflict systems
Glyco_trans_1_4	PF13692	607 - 745	5.4e-16	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012444)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01180
fragaria_vesca	FvH4_6g48410 FvH4_6g48410 FvH4_6g48410
malus_domestica	MD00G1130900.v1.1 MD09G1052000.v1.1
prunus_persica	Prupe.3G266700_v2.0.a1 Prupe.3G266700_v2.0.a1
pyrus_communis	pycom111g04330
rosa_chinensis	RchiOBHm_Chr2g0168331
rosa_laevigata	RLG00000021767
rosa_multiflora	Rmu_sc0003354.1_g000016
rosa_roxburghii	Rroxscaffold_2G00083140
rosa_rugosa	Rorug02G0532700
rosa_samantha	Rh2AG602000 Rh2BG615300 Rh2CG583000 Rh2DG625500
rosa_wichuraiana	Rw2G049970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	651
Acc36I	ACCTGC	1 cut(s)	2207
AccB7I	CCANNNNNTGG	3 cut(s)	887, 1474, 2134
AccII	CGCG	3 cut(s)	177, 729, 2210
AciI	CCGC	9 cut(s)	175, 526, 875, 1216, 1426, 1547, 1820, 1880, 2210
AclWI	GGATC	7 cut(s)	635, 686, 743, 1371, 1854, 1947, 2162
AcoI	YGGCCR	1 cut(s)	1083
AcsI	RAATTY	4 cut(s)	1160, 1294, 1646, 1694
AcuI	CTGAAG	4 cut(s)	206, 1065, 1367, 2273
AfaI	GTAC	6 cut(s)	508, 809, 1065, 1109, 1343, 2342
AfiI	CCNNNNNNNGG	9 cut(s)	181, 603, 887, 1271, 1359, 1474, 1505, 1826, 2134
AgeI	ACCGGT	2 cut(s)	1336, 1432
AgsI	TTSAA	6 cut(s)	520, 1213, 1486, 1519, 1946, 2159
AhdI	GACNNNNNGTC	1 cut(s)	54
AjnI	CCWGG	3 cut(s)	706, 853, 1580
AjuI	GAANNNNNNNTTGG	4 cut(s)	896, 928, 2172, 2204
Alw21I	GWGCWC	5 cut(s)	23, 326, 934, 1515, 1794
Alw26I	GTCTC	1 cut(s)	310
AlwI	GGATC	7 cut(s)	635, 686, 743, 1371, 1854, 1947, 2162
AoxI	GGCC	5 cut(s)	540, 952, 1083, 1350, 1808
ApeKI	GCWGC	7 cut(s)	920, 1238, 1529, 1544, 1775, 2330, 2360
ApoI	RAATTY	4 cut(s)	1160, 1294, 1646, 1694
ArsI	GACNNNNNNTTYG	2 cut(s)	2296, 2328
AsiGI	ACCGGT	2 cut(s)	1336, 1432
Asp700I	GAANNNNTTC	2 cut(s)	2286, 2349
AspLEI	GCGC	3 cut(s)	220, 731, 2210
AspS9I	GGNCC	3 cut(s)	1430, 1951, 2125
AsuC2I	CCSGG	2 cut(s)	1087, 1361
AsuHPI	GGTGA	4 cut(s)	269, 1298, 1520, 1841
AsuII	TTCGAA	1 cut(s)	941
AvaII	GGWCC	3 cut(s)	1430, 1951, 2125
AxyI	CCTNAGG	1 cut(s)	2236
BaeI	ACNNNNGTAYC	2 cut(s)	1325, 1358
BanII	GRGCYC	2 cut(s)	23, 1794
BarI	GAAGNNNNNNTAC	2 cut(s)	1340, 1372
BbsI	GAAGAC	1 cut(s)	803
Bbv12I	GWGCWC	5 cut(s)	23, 326, 934, 1515, 1794
BbvCI	CCTCAGC	2 cut(s)	77, 1875
BbvI	GCAGC	7 cut(s)	932, 1225, 1531, 1541, 1762, 2317, 2347
BccI	CCATC	6 cut(s)	413, 592, 1121, 1213, 1283, 1989
BceAI	ACGGC	2 cut(s)	2059, 2117
BcgI	CGANNNNNNTGC	2 cut(s)	1958, 1992
BciT130I	CCWGG	3 cut(s)	708, 855, 1582
BciVI	GTATCC	2 cut(s)	1568, 2143
BcnI	CCSGG	2 cut(s)	1087, 1361
BcoDI	GTCTC	1 cut(s)	310
BfaI	CTAG	5 cut(s)	618, 633, 834, 993, 2064
BfmI	CTRYAG	2 cut(s)	2173, 2331
BfuAI	ACCTGC	1 cut(s)	2207
BfuI	GTATCC	2 cut(s)	1568, 2143
BglI	GCCNNNNNGGC	1 cut(s)	1807
BisI	GCNGC	9 cut(s)	175, 875, 921, 1239, 1530, 1545, 1776, 2331, 2361
BlsI	GCNGC	9 cut(s)	176, 876, 922, 1240, 1531, 1546, 1777, 2332, 2362
BmcAI	AGTACT	1 cut(s)	508
Bme1390I	CCNGG	5 cut(s)	708, 855, 1087, 1361, 1582
Bme18I	GGWCC	3 cut(s)	1430, 1951, 2125
BmeRI	GACNNNNNGTC	1 cut(s)	54
BmgT120I	GGNCC	3 cut(s)	1430, 1951, 2125
BmiI	GGNNCC	7 cut(s)	269, 1023, 1251, 1431, 1688, 1884, 2113
BmrFI	CCNGG	5 cut(s)	708, 855, 1087, 1361, 1582
BmrI	ACTGGG	2 cut(s)	498, 1493
BmuI	ACTGGG	2 cut(s)	498, 1493
BpiI	GAAGAC	1 cut(s)	803
BpmI	CTGGAG	1 cut(s)	909
Bpu10I	CCTNAGC	2 cut(s)	77, 1875
Bpu14I	TTCGAA	1 cut(s)	941
BpuMI	CCSGG	2 cut(s)	1087, 1361
Bsa29I	ATCGAT	2 cut(s)	157, 1671
BsaAI	YACGTR	2 cut(s)	811, 1453
BsaI	GGTCTC	1 cut(s)	310
BsaJI	CCNNGG	9 cut(s)	611, 955, 1025, 1253, 1570, 1581, 1737, 1886, 2133
BsaWI	WCCGGW	4 cut(s)	1336, 1432, 1936, 2119
BsaXI	ACNNNNNCTCC	6 cut(s)	484, 514, 760, 790, 882, 912
Bsc4I	CCNNNNNNNGG	9 cut(s)	181, 603, 887, 1271, 1359, 1474, 1505, 1826, 2134
Bse118I	RCCGGY	2 cut(s)	1336, 1432
Bse1I	ACTGG	4 cut(s)	504, 888, 1499, 1646
Bse21I	CCTNAGG	1 cut(s)	2236
Bse3DI	GCAATG	2 cut(s)	1410, 2106
BseBI	CCWGG	3 cut(s)	708, 855, 1582
BseCI	ATCGAT	2 cut(s)	157, 1671
BseDI	CCNNGG	9 cut(s)	611, 955, 1025, 1253, 1570, 1581, 1737, 1886, 2133
BseGI	GGATG	9 cut(s)	220, 343, 424, 584, 868, 1224, 1896, 1909, 2000
BseLI	CCNNNNNNNGG	9 cut(s)	181, 603, 887, 1271, 1359, 1474, 1505, 1826, 2134
BseMI	GCAATG	2 cut(s)	1410, 2106
BseMII	CTCAG	8 cut(s)	65, 68, 207, 590, 669, 1163, 1866, 1969
BseNI	ACTGG	4 cut(s)	504, 888, 1499, 1646
BseRI	GAGGAG	2 cut(s)	564, 768
BseXI	GCAGC	7 cut(s)	932, 1225, 1531, 1541, 1762, 2317, 2347
BsgI	GTGCAG	1 cut(s)	2061
Bsh1236I	CGCG	3 cut(s)	177, 729, 2210
Bsh1285I	CGRYCG	1 cut(s)	1937
BshFI	GGCC	5 cut(s)	542, 954, 1085, 1352, 1810
BshTI	ACCGGT	2 cut(s)	1336, 1432
BshVI	ATCGAT	2 cut(s)	157, 1671
BsiEI	CGRYCG	1 cut(s)	1937
BsiHKAI	GWGCWC	5 cut(s)	23, 326, 934, 1515, 1794
BsiSI	CCGG	7 cut(s)	189, 1086, 1337, 1360, 1433, 1937, 2120
BslFI	GGGAC	2 cut(s)	165, 1443
BslI	CCNNNNNNNGG	9 cut(s)	181, 603, 887, 1271, 1359, 1474, 1505, 1826, 2134
BsmAI	GTCTC	1 cut(s)	310
BsmFI	GGGAC	2 cut(s)	165, 1443
BsmI	GAATGC	2 cut(s)	82, 388
BsnI	GGCC	5 cut(s)	542, 954, 1085, 1352, 1810
Bso31I	GGTCTC	1 cut(s)	310
Bsp119I	TTCGAA	1 cut(s)	941
Bsp1286I	GDGCHC	5 cut(s)	23, 326, 934, 1515, 1794
Bsp143I	GATC	9 cut(s)	640, 691, 748, 1363, 1388, 1824, 1846, 1939, 2167
Bsp19I	CCATGG	2 cut(s)	1570, 1886
BspACI	CCGC	9 cut(s)	175, 526, 875, 1216, 1426, 1547, 1820, 1880, 2210
BspANI	GGCC	5 cut(s)	542, 954, 1085, 1352, 1810
BspCNI	CTCAG	8 cut(s)	64, 69, 206, 589, 670, 1164, 1867, 1968
BspDI	ATCGAT	2 cut(s)	157, 1671
BspFNI	CGCG	3 cut(s)	177, 729, 2210
BspHI	TCATGA	1 cut(s)	900
BspLI	GGNNCC	7 cut(s)	269, 1023, 1251, 1431, 1688, 1884, 2113
BspMAI	CTGCAG	1 cut(s)	2335
BspMI	ACCTGC	1 cut(s)	2207
BspPI	GGATC	7 cut(s)	635, 686, 743, 1371, 1854, 1947, 2162
BspT104I	TTCGAA	1 cut(s)	941
BspTNI	GGTCTC	1 cut(s)	310
BsrDI	GCAATG	2 cut(s)	1410, 2106
BsrFI	RCCGGY	2 cut(s)	1336, 1432
BsrI	ACTGG	4 cut(s)	504, 888, 1499, 1646
BssAI	RCCGGY	2 cut(s)	1336, 1432
BssECI	CCNNGG	9 cut(s)	611, 955, 1025, 1253, 1570, 1581, 1737, 1886, 2133
BssMI	GATC	9 cut(s)	640, 691, 748, 1363, 1388, 1824, 1846, 1939, 2167
BssT1I	CCWWGG	5 cut(s)	611, 955, 1570, 1737, 1886
Bst2UI	CCWGG	3 cut(s)	708, 855, 1582
Bst4CI	ACNGT	6 cut(s)	434, 759, 1564, 1667, 2155, 2246
Bst6I	CTCTTC	5 cut(s)	36, 861, 1064, 1941, 2290
BstAPI	GCANNNNNTGC	2 cut(s)	11, 929
BstBAI	YACGTR	2 cut(s)	811, 1453
BstBI	TTCGAA	1 cut(s)	941
BstC8I	GCNNGC	1 cut(s)	119
BstDSI	CCRYGG	4 cut(s)	1253, 1570, 1886, 2133
BstENI	CCTNNNNNAGG	1 cut(s)	1269
BstF5I	GGATG	9 cut(s)	220, 343, 424, 584, 868, 1224, 1896, 1909, 2000
BstFNI	CGCG	3 cut(s)	177, 729, 2210
BstHHI	GCGC	3 cut(s)	220, 731, 2210
BstKTI	GATC	9 cut(s)	643, 694, 751, 1366, 1391, 1827, 1849, 1942, 2170
BstMAI	GTCTC	1 cut(s)	310
BstMBI	GATC	9 cut(s)	640, 691, 748, 1363, 1388, 1824, 1846, 1939, 2167
BstMCI	CGRYCG	1 cut(s)	1937
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 224, 456, 534, 929, 1040, 1307, 1798, 1807
BstNI	CCWGG	3 cut(s)	708, 855, 1582
BstSCI	CCNGG	5 cut(s)	706, 853, 1085, 1359, 1580
BstSFI	CTRYAG	2 cut(s)	2173, 2331
BstUI	CGCG	3 cut(s)	177, 729, 2210
BstV1I	GCAGC	7 cut(s)	932, 1225, 1531, 1541, 1762, 2317, 2347
BstV2I	GAAGAC	1 cut(s)	803
BstX2I	RGATCY	3 cut(s)	640, 748, 1939
BstXI	CCANNNNNNTGG	1 cut(s)	2122
BstYI	RGATCY	3 cut(s)	640, 748, 1939
Bsu15I	ATCGAT	2 cut(s)	157, 1671
Bsu36I	CCTNAGG	1 cut(s)	2236
BsuI	GTATCC	2 cut(s)	1568, 2143
BsuRI	GGCC	5 cut(s)	542, 954, 1085, 1352, 1810
BsuTUI	ATCGAT	2 cut(s)	157, 1671
BtgI	CCRYGG	4 cut(s)	1253, 1570, 1886, 2133
BtsCI	GGATG	9 cut(s)	220, 343, 424, 584, 868, 1224, 1896, 1909, 2000
BtsI	GCAGTG	1 cut(s)	1323
BtsIMutI	CAGTG	3 cut(s)	881, 1323, 1560
BveI	ACCTGC	1 cut(s)	2207
Cac8I	GCNNGC	1 cut(s)	119
CciI	TCATGA	1 cut(s)	900
CfoI	GCGC	3 cut(s)	220, 731, 2210
Cfr10I	RCCGGY	2 cut(s)	1336, 1432
Cfr13I	GGNCC	3 cut(s)	1430, 1951, 2125
ClaI	ATCGAT	2 cut(s)	157, 1671
CseI	GACGC	3 cut(s)	44, 166, 618
Csp6I	GTAC	6 cut(s)	507, 808, 1064, 1108, 1342, 2341
CspAI	ACCGGT	2 cut(s)	1336, 1432
CviAII	CATG	7 cut(s)	101, 901, 1115, 1571, 1887, 2129, 2231
CviQI	GTAC	6 cut(s)	507, 808, 1064, 1108, 1342, 2341
DpnI	GATC	9 cut(s)	642, 693, 750, 1365, 1390, 1826, 1848, 1941, 2169
DpnII	GATC	9 cut(s)	640, 691, 748, 1363, 1388, 1824, 1846, 1939, 2167
DriI	GACNNNNNGTC	1 cut(s)	54
EaeI	YGGCCR	1 cut(s)	1083
Eam1104I	CTCTTC	5 cut(s)	36, 861, 1064, 1941, 2290
Eam1105I	GACNNNNNGTC	1 cut(s)	54
EarI	CTCTTC	5 cut(s)	36, 861, 1064, 1941, 2290
Ecl136II	GAGCTC	2 cut(s)	21, 1792
Eco130I	CCWWGG	5 cut(s)	611, 955, 1570, 1737, 1886
Eco147I	AGGCCT	1 cut(s)	1352
Eco24I	GRGCYC	2 cut(s)	23, 1794
Eco31I	GGTCTC	1 cut(s)	310
Eco32I	GATATC	2 cut(s)	552, 1207
Eco47I	GGWCC	3 cut(s)	1430, 1951, 2125
Eco53kI	GAGCTC	2 cut(s)	21, 1792
Eco57I	CTGAAG	4 cut(s)	206, 1065, 1367, 2273
Eco81I	CCTNAGG	1 cut(s)	2236
EcoICRI	GAGCTC	2 cut(s)	21, 1792
EcoNI	CCTNNNNNAGG	1 cut(s)	1269
EcoO109I	RGGNCCY	1 cut(s)	1951
EcoRII	CCWGG	3 cut(s)	706, 853, 1580
EcoRV	GATATC	2 cut(s)	552, 1207
EcoT14I	CCWWGG	5 cut(s)	611, 955, 1570, 1737, 1886
EcoT22I	ATGCAT	1 cut(s)	1120
EcoT38I	GRGCYC	2 cut(s)	23, 1794
ErhI	CCWWGG	5 cut(s)	611, 955, 1570, 1737, 1886
FaeI	CATG	7 cut(s)	104, 904, 1118, 1574, 1890, 2132, 2234
FalI	AAGNNNNNCTT	2 cut(s)	2337, 2369
FaqI	GGGAC	2 cut(s)	165, 1443
FatI	CATG	7 cut(s)	100, 900, 1114, 1570, 1886, 2128, 2230
FauI	CCCGC	1 cut(s)	1419
Fnu4HI	GCNGC	9 cut(s)	175, 875, 921, 1239, 1530, 1545, 1776, 2331, 2361
FokI	GGATG	9 cut(s)	227, 350, 431, 571, 875, 1231, 1903, 1916, 2007
FriOI	GRGCYC	2 cut(s)	23, 1794
Fsp4HI	GCNGC	9 cut(s)	175, 875, 921, 1239, 1530, 1545, 1776, 2331, 2361
FspBI	CTAG	5 cut(s)	618, 633, 834, 993, 2064
GlaI	GCGC	3 cut(s)	219, 730, 2209
GluI	GCNGC	9 cut(s)	175, 875, 921, 1239, 1530, 1545, 1776, 2331, 2361
GsuI	CTGGAG	1 cut(s)	909
HaeIII	GGCC	5 cut(s)	542, 954, 1085, 1352, 1810
HapII	CCGG	7 cut(s)	189, 1086, 1337, 1360, 1433, 1937, 2120
HgaI	GACGC	3 cut(s)	44, 166, 618
HhaI	GCGC	3 cut(s)	220, 731, 2210
Hin1II	CATG	7 cut(s)	104, 904, 1118, 1574, 1890, 2132, 2234
Hin6I	GCGC	3 cut(s)	218, 729, 2208
HinP1I	GCGC	3 cut(s)	218, 729, 2208
HincII	GTYRAC	1 cut(s)	2253
HindII	GTYRAC	1 cut(s)	2253
HindIII	AAGCTT	1 cut(s)	348
HinfI	GANTC	7 cut(s)	49, 365, 512, 1744, 1897, 2004, 2227
HpaII	CCGG	7 cut(s)	189, 1086, 1337, 1360, 1433, 1937, 2120
HphI	GGTGA	4 cut(s)	269, 1298, 1520, 1841
Hpy166II	GTNNAC	5 cut(s)	1001, 1342, 1663, 1760, 2253
Hpy188III	TCNNGA	8 cut(s)	46, 677, 901, 1210, 1901, 1943, 1979, 2064
Hpy8I	GTNNAC	5 cut(s)	1001, 1342, 1663, 1760, 2253
Hpy99I	CGWCG	2 cut(s)	60, 182
HpyAV	CCTTC	8 cut(s)	120, 241, 281, 666, 1342, 1595, 2070, 2276
HpyCH4III	ACNGT	6 cut(s)	434, 759, 1564, 1667, 2155, 2246
HpyCH4IV	ACGT	3 cut(s)	810, 828, 1452
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 224, 456, 534, 929, 1040, 1307, 1798, 1807
HpySE526I	ACGT	3 cut(s)	810, 828, 1452
Hsp92II	CATG	7 cut(s)	104, 904, 1118, 1574, 1890, 2132, 2234
HspAI	GCGC	3 cut(s)	218, 729, 2208
Kzo9I	GATC	9 cut(s)	640, 691, 748, 1363, 1388, 1824, 1846, 1939, 2167
LmnI	GCTCC	5 cut(s)	138, 781, 890, 937, 1966
Lsp1109I	GCAGC	7 cut(s)	932, 1225, 1531, 1541, 1762, 2317, 2347
MaeI	CTAG	5 cut(s)	618, 633, 834, 993, 2064
MaeII	ACGT	3 cut(s)	810, 828, 1452
MaeIII	GTNAC	3 cut(s)	565, 697, 1329
MalI	GATC	9 cut(s)	642, 693, 750, 1365, 1390, 1826, 1848, 1941, 2169
MboI	GATC	9 cut(s)	640, 691, 748, 1363, 1388, 1824, 1846, 1939, 2167
MflI	RGATCY	3 cut(s)	640, 748, 1939
MhlI	GDGCHC	5 cut(s)	23, 326, 934, 1515, 1794
MluCI	AATT	9 cut(s)	64, 411, 1160, 1294, 1401, 1646, 1656, 1694, 2162
MlyI	GAGTC	3 cut(s)	43, 374, 1906
MmeI	TCCRAC	2 cut(s)	1981, 2174
Mph1103I	ATGCAT	1 cut(s)	1120
MroXI	GAANNNNTTC	2 cut(s)	2286, 2349
MseI	TTAA	4 cut(s)	315, 470, 1590, 2013
MslI	CAYNNNNRTG	6 cut(s)	87, 905, 1681, 1716, 1993, 2120
MspA1I	CMGCKG	4 cut(s)	1532, 1822, 1912, 2036
MspI	CCGG	7 cut(s)	189, 1086, 1337, 1360, 1433, 1937, 2120
MspR9I	CCNGG	5 cut(s)	708, 855, 1087, 1361, 1582
Mva1269I	GAATGC	2 cut(s)	82, 388
MvaI	CCWGG	3 cut(s)	708, 855, 1582
MvnI	CGCG	3 cut(s)	177, 729, 2210
MwoI	GCNNNNNNNGC	9 cut(s)	11, 224, 456, 534, 929, 1040, 1307, 1798, 1807
NciI	CCSGG	2 cut(s)	1087, 1361
NcoI	CCATGG	2 cut(s)	1570, 1886
NdeII	GATC	9 cut(s)	640, 691, 748, 1363, 1388, 1824, 1846, 1939, 2167
NlaIII	CATG	7 cut(s)	104, 904, 1118, 1574, 1890, 2132, 2234
NlaIV	GGNNCC	7 cut(s)	269, 1023, 1251, 1431, 1688, 1884, 2113
NmeAIII	GCCGAG	3 cut(s)	40, 518, 1060
NsiI	ATGCAT	1 cut(s)	1120
NspV	TTCGAA	1 cut(s)	941
PagI	TCATGA	1 cut(s)	900
PceI	AGGCCT	1 cut(s)	1352
PctI	GAATGC	2 cut(s)	82, 388
PdmI	GAANNNNTTC	2 cut(s)	2286, 2349
PfeI	GAWTC	4 cut(s)	512, 1744, 2004, 2227
PflMI	CCANNNNNTGG	3 cut(s)	887, 1474, 2134
PfoI	TCCNGGA	1 cut(s)	706
PinAI	ACCGGT	2 cut(s)	1336, 1432
PkrI	GCNGC	9 cut(s)	176, 876, 922, 1240, 1531, 1546, 1777, 2332, 2362
PleI	GAGTC	3 cut(s)	43, 373, 1905
PpsI	GAGTC	3 cut(s)	43, 373, 1905
Ppu21I	YACGTR	2 cut(s)	811, 1453
PpuMI	RGGWCCY	1 cut(s)	1951
PsiI	TTATAA	1 cut(s)	651
Psp124BI	GAGCTC	2 cut(s)	23, 1794
Psp5II	RGGWCCY	1 cut(s)	1951
Psp6I	CCWGG	3 cut(s)	706, 853, 1580
PspGI	CCWGG	3 cut(s)	706, 853, 1580
PspN4I	GGNNCC	7 cut(s)	269, 1023, 1251, 1431, 1688, 1884, 2113
PspPI	GGNCC	3 cut(s)	1430, 1951, 2125
PspPPI	RGGWCCY	1 cut(s)	1951
PstI	CTGCAG	1 cut(s)	2335
PsuI	RGATCY	3 cut(s)	640, 748, 1939
PvuII	CAGCTG	3 cut(s)	1532, 1912, 2036
RsaI	GTAC	6 cut(s)	508, 809, 1065, 1109, 1343, 2342
RsaNI	GTAC	6 cut(s)	507, 808, 1064, 1108, 1342, 2341
RseI	CAYNNNNRTG	6 cut(s)	87, 905, 1681, 1716, 1993, 2120
SacI	GAGCTC	2 cut(s)	23, 1794
SaqAI	TTAA	4 cut(s)	315, 470, 1590, 2013
SatI	GCNGC	9 cut(s)	175, 875, 921, 1239, 1530, 1545, 1776, 2331, 2361
Sau3AI	GATC	9 cut(s)	640, 691, 748, 1363, 1388, 1824, 1846, 1939, 2167
Sau96I	GGNCC	3 cut(s)	1430, 1951, 2125
ScaI	AGTACT	1 cut(s)	508
SchI	GAGTC	3 cut(s)	43, 374, 1906
ScrFI	CCNGG	5 cut(s)	708, 855, 1087, 1361, 1582
SduI	GDGCHC	5 cut(s)	23, 326, 934, 1515, 1794
SfcI	CTRYAG	2 cut(s)	2173, 2331
SfuI	TTCGAA	1 cut(s)	941
SinI	GGWCC	3 cut(s)	1430, 1951, 2125
SmiMI	CAYNNNNRTG	6 cut(s)	87, 905, 1681, 1716, 1993, 2120
Sse9I	AATT	9 cut(s)	64, 411, 1160, 1294, 1401, 1646, 1656, 1694, 2162
SseBI	AGGCCT	1 cut(s)	1352
SsiI	CCGC	9 cut(s)	175, 526, 875, 1216, 1426, 1547, 1820, 1880, 2210
SspI	AATATT	1 cut(s)	1522
SspMI	CTAG	5 cut(s)	618, 633, 834, 993, 2064
SstI	GAGCTC	2 cut(s)	23, 1794
StuI	AGGCCT	1 cut(s)	1352
StyD4I	CCNGG	5 cut(s)	706, 853, 1085, 1359, 1580
StyI	CCWWGG	5 cut(s)	611, 955, 1570, 1737, 1886
TaaI	ACNGT	6 cut(s)	434, 759, 1564, 1667, 2155, 2246
TaiI	ACGT	3 cut(s)	813, 831, 1455
TaqI	TCGA	5 cut(s)	157, 180, 941, 1671, 1978
TasI	AATT	9 cut(s)	64, 411, 1160, 1294, 1401, 1646, 1656, 1694, 2162
TatI	WGTACW	2 cut(s)	506, 1107
TauI	GCSGC	2 cut(s)	177, 877
TfiI	GAWTC	4 cut(s)	512, 1744, 2004, 2227
Tru1I	TTAA	4 cut(s)	315, 470, 1590, 2013
Tru9I	TTAA	4 cut(s)	315, 470, 1590, 2013
TscAI	CASTG	3 cut(s)	888, 1330, 1567
TseI	GCWGC	7 cut(s)	920, 1238, 1529, 1544, 1775, 2330, 2360
TspGWI	ACGGA	3 cut(s)	1081, 1242, 1383
TspRI	CASTG	3 cut(s)	888, 1330, 1567
Van91I	CCANNNNNTGG	3 cut(s)	887, 1474, 2134
VpaK11BI	GGWCC	3 cut(s)	1430, 1951, 2125
XagI	CCTNNNNNAGG	1 cut(s)	1269
XapI	RAATTY	4 cut(s)	1160, 1294, 1646, 1694
XbaI	TCTAGA	1 cut(s)	2063
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1735
XmnI	GAANNNNTTC	2 cut(s)	2286, 2349
XspI	CTAG	5 cut(s)	618, 633, 834, 993, 2064
ZrmI	AGTACT	1 cut(s)	508
Zsp2I	ATGCAT	1 cut(s)	1120

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.