Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0012444

Physical Location & Seq

Genomic Coordinates Reverse (-)

83021868 .. 83029905

Gene Structure 8038 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG602000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2352 bp

ATGGCTTTCATAAAGTCTCTGCCTTTTGTGATAGAGATCAAGGCTGAGAGCTCTGTGCTGCTCCACAGCGAGAACAGTCGCCGGCTCCGATTCCCATTCTTCACTCACCGGCGGAGGAGGGCCGGTGAGGTGAGTCTGATCAGTGGTTCAGCAAGTGGGTGTTCACAGGCTGTGGGGTTGTGTAGTGGGCAGATTAGTTCTTGCACAAAAGGTCAGCTTTGGAGAGTGAAGCCTGTTAGAGCAATTCGTAAGGTCTCTGGGGAAGGTGTGGAGGACAAAGGTGAATCAGAGGATGCGCTTCAGGCCACAATTGAAAAGAGCAAGAAGGTTCTTGCTATGCAAAGAGACCTACTTCAACAGATTGCTGAAAGAAGGAAACTGGTATCTTCTATAACAAGTAGTACTGTAGAAGAAGAAGAAGATCAAGAAGAGGTTGATTCTTTTGAACAAGAGGATTCTTTTTCGGATGTAGAAAGTTCTTCAGGTGGTGGTAATGACACTATTGAAGAACAAAATGACAGCATTGCTTCAAGCAGCTATGGTCATTCAACTGCAGAAAAGGAACTAGAAACAGTTCCTTCTGCTGTTAGTAGAAGCTTTAGTGAAATTGAGAAGGAGCATGAAGAAACTGTGCCTCTTAATAAGGCTCCCTATGAGGCAGAGTCCACAAAGCATGTGAATAAGACTAGTGCCAAGTCAGAGTGGTCCGATTCTCTGCCATCTTTTATTTCAACTACTGTTGAGACGTCCTCTCTGAAAGATGAAGAAGAGCATGTAGATCTGAAAAAACCAAGTTTACAGGAGGTCATTGTTGGGGCAACGGATCCTACAATCGAAGACGTGAAGCCCCCTCCTTTGGCTGGGCCCAATGTCATGAATATCATATTGGTGGCAGCAGAATGTGCTCCGTGGTCGAAAACAGGTGGGCTTGGAGATGTTGCTGGAGCTCTACCAAAGGCTTTGGCTCGGCGTGGCCATAGGGTTATGGTTGTGGCACCTCGGTATGGCAATTATGCTGAACCTCAAGATTTAGGAGTCCGGAAAGGATATAAAGTAGATGGCCAGCATATGGAAGTAGCATACTTTCACTCCTATATTGATGGCGTAGATTTTGTCTTCATTGACTCTCCTATGTTCCGTCACATGGAGAATAATATATACGGAGGAAAGCGTGAGGATATCTTAAAGCGGATGGTGTTATTTTGCAAGGCTGCTGTTGAGGCCCCTTGGCATGTTCCCTGTGGTGGGATTTGCTATGGTGATGGAAACTTGGCTTTCATTGCAAATGACTGGCATACTGCACTGTTGCCAGTGTATTTGAAGGCGTACTATCGAGACAATGGCTTGATGATGTATACAAGGTCCATCCTTGTAATCCATAACATAGCTCACCAGGGTCGTGGGCCGGTAAGTGATTTCTCCTTCGTTGATCTTCCACAACACTACTTGGACCTTTTCAAATTGTATGATCCCGTTGGAGGGGAGCACTTCAATATCTTTGGAGCTGGTTTGAAGACAGCCGACCGTGTGGTTACTGTAAGTCATGGATACGCCTGGGAGGTTAAAACACCTGAAGGTGGTTGGGGATTGCATGGGATCATAAATGAAAATCACTGGAAACTCAGCGGCATTGTTAATGGAATTGATAATAAAGACTGGAATCCACAGTTTGATGTTTTCTTGAGATCAGATGGTTATACAAACTACTCCCTAGAGACACTTCAGACTGGCAAGCCTCAGTGTAAGGCAGCTTTACAGAAGGAGCTGAGTTTGCCGATCCGTGAGGATGTCCCTTTAATTGGTTTCATTGGGAGACTGGATCCCCAGAAAGGTGTTGATCTTATAGCACAGGCGATTCCGTGGATGATGGAGCAAGATGTGCAACTAGTCATGTTAGGCACTGGAAGACCTGAGCTGGAACAGATGCTGAGAGAGTTTGAACATCAACACAGAGACAAGGTCAGGGGATGGGTTGGTTTTTCTGTAGAAACAGCTCATAGAATAACTGCCGGTGTAGACATTTTGCTCATGCCATCAAGATTTGAGCCTTGTGGACTGAACCAACTATATGCCATGAACTATGGGACAGTTCCAGTCGTTCATGCTGTTGGTGGACTCAGAGATACTGTACATCCTTTCAATCCATACGAGGAGTCGGGGCTTGGGTGGACATTTGACAGCGCTGATACAGGTAAGCTCATCCATGCATTAGGTAATTGCATATATACTTATCGAGAGTACAAGCAGAGTTGGGAAGGAATCCAGAGACGAGGGATGATGCAAGACCTGAGTTGGGACAATGCTGCTCAGAAGTATGAGGAGGTTGTTGTGGCTGCAAAGTACCAATGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0006073 GO:0008150 GO:0008152 GO:0009011 GO:0009058 GO:0009059 GO:0009250 GO:0009501 GO:0009507 GO:0009536 GO:0009987 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0019252 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 map00500 map01100 map01110 map02026

Pfam Domains

Protein Families

Glyco_trans_1_4 Glyco_transf_5 Glycos_transf_1

Protein Analysis

783

Amino Acids

87.33

Weight (kDa)

5.44

Isoelectric Point (pI)

48.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_5	PF08323	293 - 535	6.6e-61	Starch synthase catalytic domain
Glycos_transf_1	PF00534	591 - 713	1.2e-14	Glycosyl transferases group 1
GT4-conflict	PF20706	594 - 771	1e-05	Family 4 Glycosyltransferase in conflict systems
Glyco_trans_1_4	PF13692	598 - 736	1.4e-16	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012444)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01180
fragaria_vesca	FvH4_6g48410 FvH4_6g48410 FvH4_6g48410
malus_domestica	MD00G1130900.v1.1 MD09G1052000.v1.1
prunus_persica	Prupe.3G266700_v2.0.a1 Prupe.3G266700_v2.0.a1
pyrus_communis	pycom111g04330
rosa_chinensis	RchiOBHm_Chr2g0168331
rosa_laevigata	RLG00000021767
rosa_multiflora	Rmu_sc0003354.1_g000016
rosa_roxburghii	Rroxscaffold_2G00083140
rosa_rugosa	Rorug02G0532700
rosa_samantha	Rh2AG602000 Rh2BG615300 Rh2CG583000 Rh2DG625500
rosa_wichuraiana	Rw2G049970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	749
AccB1I	GGYRCC	1 cut(s)	994
AccB7I	CCANNNNNTGG	1 cut(s)	1069
AccI	GTMKAC	2 cut(s)	1355, 2016
AccIII	TCCGGA	1 cut(s)	1038
AciI	CCGC	3 cut(s)	112, 1189, 1626
AclWI	GGATC	7 cut(s)	818, 831, 1463, 1604, 1771, 1814, 1827
AcoI	YGGCCR	2 cut(s)	973, 1060
AcuI	CTGAAG	4 cut(s)	284, 465, 1593, 1706
AcyI	GRCGYC	1 cut(s)	746
AfaI	GTAC	5 cut(s)	403, 1328, 2130, 2240, 2342
AfeI	AGCGCT	1 cut(s)	2182
AhlI	ACTAGT	2 cut(s)	686, 1885
AjiI	CACGTC	1 cut(s)	841
AjnI	CCWGG	2 cut(s)	1392, 1553
AjuI	GAANNNNNNNTTGG	2 cut(s)	869, 901
Alw21I	GWGCWC	4 cut(s)	53, 907, 949, 1488
Alw26I	GTCTC	9 cut(s)	21, 259, 339, 737, 1329, 1709, 1807, 1947, 2260
AlwI	GGATC	7 cut(s)	818, 831, 1463, 1604, 1771, 1814, 1827
AlwNI	CAGNNNCTG	1 cut(s)	1927
Aor13HI	TCCGGA	1 cut(s)	1038
Aor51HI	AGCGCT	1 cut(s)	2182
AoxI	GGCC	7 cut(s)	120, 303, 863, 973, 1060, 1221, 1403
ApaI	GGGCCC	1 cut(s)	867
ApeKI	GCWGC	7 cut(s)	58, 534, 893, 1211, 1748, 2303, 2333
Asp700I	GAANNNNTTC	1 cut(s)	573
AspLEI	GCGC	2 cut(s)	298, 2183
AspS9I	GGNCC	8 cut(s)	120, 705, 863, 864, 1222, 1362, 1403, 1450
AsuHPI	GGTGA	6 cut(s)	98, 137, 142, 293, 1271, 1382
AvaII	GGWCC	3 cut(s)	705, 1362, 1450
BaeGI	GKGCMC	1 cut(s)	867
BalI	TGGCCA	2 cut(s)	975, 1062
BamHI	GGATCC	2 cut(s)	823, 1819
BanI	GGYRCC	1 cut(s)	994
BanII	GRGCYC	3 cut(s)	53, 867, 949
BbsI	GAAGAC	4 cut(s)	843, 1108, 1520, 1912
Bbv12I	GWGCWC	4 cut(s)	53, 907, 949, 1488
BbvI	GCAGC	7 cut(s)	45, 546, 905, 1198, 1760, 2290, 2320
BciT130I	CCWGG	2 cut(s)	1394, 1555
BciVI	GTATCC	1 cut(s)	1541
BclI	TGATCA	1 cut(s)	138
BcoDI	GTCTC	9 cut(s)	21, 259, 339, 737, 1329, 1709, 1807, 1947, 2260
BcuI	ACTAGT	2 cut(s)	686, 1885
BfaI	CTAG	4 cut(s)	566, 687, 1712, 1886
BfmI	CTRYAG	3 cut(s)	405, 552, 1983
BfoI	RGCGCY	1 cut(s)	2184
BfuI	GTATCC	1 cut(s)	1541
BglII	AGATCT	1 cut(s)	778
BisI	GCNGC	8 cut(s)	59, 535, 894, 1212, 1627, 1749, 2304, 2334
BlsI	GCNGC	8 cut(s)	60, 536, 895, 1213, 1628, 1750, 2305, 2335
BmcAI	AGTACT	1 cut(s)	403
Bme1390I	CCNGG	2 cut(s)	1394, 1555
Bme18I	GGWCC	3 cut(s)	705, 1362, 1450
BmgBI	CACGTC	1 cut(s)	841
BmgT120I	GGNCC	8 cut(s)	120, 705, 863, 864, 1222, 1362, 1403, 1450
BmiI	GGNNCC	7 cut(s)	86, 648, 825, 865, 996, 1224, 1821
BmrFI	CCNGG	2 cut(s)	1394, 1555
BmsI	GCATC	3 cut(s)	283, 1914, 2268
BpiI	GAAGAC	4 cut(s)	843, 1108, 1520, 1912
BplI	GAGNNNNNCTC	2 cut(s)	734, 766
BpmI	CTGGAG	1 cut(s)	963
Bpu10I	CCTNAGC	1 cut(s)	1911
BpuEI	CTTGAG	2 cut(s)	1008, 1702
BsaBI	GATNNNNATC	1 cut(s)	35
BsaHI	GRCGYC	1 cut(s)	746
BsaI	GGTCTC	2 cut(s)	259, 339
BsaJI	CCNNGG	6 cut(s)	908, 998, 1226, 1393, 1554, 1859
BsaWI	WCCGGW	1 cut(s)	1038
BsaXI	ACNNNNNCTCC	4 cut(s)	109, 139, 1073, 1103
Bse118I	RCCGGY	5 cut(s)	81, 108, 122, 1405, 2009
Bse1I	ACTGG	9 cut(s)	384, 1295, 1310, 1619, 1661, 1732, 1821, 1906, 2093
Bse3DI	GCAATG	2 cut(s)	522, 1278
Bse8I	GATNNNNATC	1 cut(s)	35
BseAI	TCCGGA	1 cut(s)	1038
BseBI	CCWGG	2 cut(s)	1394, 1555
BseDI	CCNNGG	6 cut(s)	908, 998, 1226, 1393, 1554, 1859
BseJI	GATNNNNATC	1 cut(s)	35
BseMI	GCAATG	2 cut(s)	522, 1278
BseMII	CTCAG	9 cut(s)	36, 1636, 1751, 1757, 1902, 1919, 2131, 2279, 2321
BseNI	ACTGG	9 cut(s)	384, 1295, 1310, 1619, 1661, 1732, 1821, 1906, 2093
BseRI	GAGGAG	3 cut(s)	130, 2165, 2333
BseSI	GKGCMC	1 cut(s)	867
BseXI	GCAGC	7 cut(s)	45, 546, 905, 1198, 1760, 2290, 2320
BseYI	CCCAGC	1 cut(s)	860
BsgI	GTGCAG	1 cut(s)	1284
Bsh1285I	CGRYCG	1 cut(s)	1525
BshFI	GGCC	7 cut(s)	122, 305, 865, 975, 1062, 1223, 1405
BshNI	GGYRCC	1 cut(s)	994
BsiEI	CGRYCG	1 cut(s)	1525
BsiHKAI	GWGCWC	4 cut(s)	53, 907, 949, 1488
BsiSI	CCGG	6 cut(s)	82, 109, 123, 1039, 1406, 2010
BslFI	GGGAC	3 cut(s)	1775, 2098, 2309
BsmAI	GTCTC	9 cut(s)	21, 259, 339, 737, 1329, 1709, 1807, 1947, 2260
BsmBI	CGTCTC	2 cut(s)	737, 2260
BsmFI	GGGAC	3 cut(s)	1775, 2098, 2309
BsnI	GGCC	7 cut(s)	122, 305, 865, 975, 1062, 1223, 1405
Bso31I	GGTCTC	2 cut(s)	259, 339
Bsp120I	GGGCCC	1 cut(s)	863
Bsp1286I	GDGCHC	5 cut(s)	53, 867, 907, 949, 1488
Bsp13I	TCCGGA	1 cut(s)	1038
Bsp1407I	TGTACA	1 cut(s)	2128
BspACI	CCGC	3 cut(s)	112, 1189, 1626
BspANI	GGCC	7 cut(s)	122, 305, 865, 975, 1062, 1223, 1405
BspCNI	CTCAG	9 cut(s)	37, 1635, 1750, 1758, 1903, 1920, 2130, 2280, 2320
BspEI	TCCGGA	1 cut(s)	1038
BspHI	TCATGA	1 cut(s)	873
BspLI	GGNNCC	7 cut(s)	86, 648, 825, 865, 996, 1224, 1821
BspMAI	CTGCAG	1 cut(s)	556
BspPI	GGATC	7 cut(s)	818, 831, 1463, 1604, 1771, 1814, 1827
BspQI	GCTCTTC	1 cut(s)	762
BspT107I	GGYRCC	1 cut(s)	994
BspTNI	GGTCTC	2 cut(s)	259, 339
BsrDI	GCAATG	2 cut(s)	522, 1278
BsrFI	RCCGGY	5 cut(s)	81, 108, 122, 1405, 2009
BsrGI	TGTACA	1 cut(s)	2128
BsrI	ACTGG	9 cut(s)	384, 1295, 1310, 1619, 1661, 1732, 1821, 1906, 2093
BssAI	RCCGGY	5 cut(s)	81, 108, 122, 1405, 2009
BssECI	CCNNGG	6 cut(s)	908, 998, 1226, 1393, 1554, 1859
BssNAI	GTATAC	1 cut(s)	1356
BssNI	GRCGYC	1 cut(s)	746
BssT1I	CCWWGG	1 cut(s)	1226
Bst1107I	GTATAC	1 cut(s)	1356
Bst2UI	CCWGG	2 cut(s)	1394, 1555
Bst6I	CTCTTC	2 cut(s)	423, 762
BstACI	GRCGYC	1 cut(s)	746
BstAPI	GCANNNNNTGC	2 cut(s)	902, 1879
BstAUI	TGTACA	1 cut(s)	2128
BstC8I	GCNNGC	3 cut(s)	83, 1064, 1733
BstDEI	CTNAG	9 cut(s)	45, 1622, 1737, 1766, 1911, 1928, 2117, 2288, 2307
BstDSI	CCRYGG	2 cut(s)	908, 1859
BstH2I	RGCGCY	1 cut(s)	2184
BstHHI	GCGC	2 cut(s)	298, 2183
BstMAI	GTCTC	9 cut(s)	21, 259, 339, 737, 1329, 1709, 1807, 1947, 2260
BstMCI	CGRYCG	1 cut(s)	1525
BstMWI	GCNNNNNNNGC	6 cut(s)	302, 902, 1220, 1280, 1771, 1879
BstNI	CCWGG	2 cut(s)	1394, 1555
BstNSI	RCATGY	3 cut(s)	677, 776, 1235
BstSCI	CCNGG	2 cut(s)	1392, 1553
BstSFI	CTRYAG	3 cut(s)	405, 552, 1983
BstSLI	GKGCMC	1 cut(s)	867
BstV1I	GCAGC	7 cut(s)	45, 546, 905, 1198, 1760, 2290, 2320
BstV2I	GAAGAC	4 cut(s)	843, 1108, 1520, 1912
BstX2I	RGATCY	3 cut(s)	778, 823, 1819
BstXI	CCANNNNNNTGG	1 cut(s)	1400
BstYI	RGATCY	3 cut(s)	778, 823, 1819
BstZ17I	GTATAC	1 cut(s)	1356
BsuI	GTATCC	1 cut(s)	1541
BsuRI	GGCC	7 cut(s)	122, 305, 865, 975, 1062, 1223, 1405
BtgI	CCRYGG	2 cut(s)	908, 1859
BtrI	CACGTC	1 cut(s)	841
BtsIMutI	CAGTG	6 cut(s)	148, 1301, 1317, 1612, 1745, 1899
Cac8I	GCNNGC	3 cut(s)	83, 1064, 1733
CaiI	CAGNNNCTG	1 cut(s)	1927
CciI	TCATGA	1 cut(s)	873
CfoI	GCGC	2 cut(s)	298, 2183
Cfr10I	RCCGGY	5 cut(s)	81, 108, 122, 1405, 2009
Cfr13I	GGNCC	8 cut(s)	120, 705, 863, 864, 1222, 1362, 1403, 1450
Csp6I	GTAC	5 cut(s)	402, 1327, 2129, 2239, 2341
CviQI	GTAC	5 cut(s)	402, 1327, 2129, 2239, 2341
DdeI	CTNAG	9 cut(s)	45, 1622, 1737, 1766, 1911, 1928, 2117, 2288, 2307
EaeI	YGGCCR	2 cut(s)	973, 1060
Eam1104I	CTCTTC	2 cut(s)	423, 762
EarI	CTCTTC	2 cut(s)	423, 762
EciI	GGCGGA	1 cut(s)	127
Ecl136II	GAGCTC	2 cut(s)	51, 947
Eco130I	CCWWGG	1 cut(s)	1226
Eco24I	GRGCYC	3 cut(s)	53, 867, 949
Eco31I	GGTCTC	2 cut(s)	259, 339
Eco32I	GATATC	1 cut(s)	1180
Eco47I	GGWCC	3 cut(s)	705, 1362, 1450
Eco47III	AGCGCT	1 cut(s)	2182
Eco53kI	GAGCTC	2 cut(s)	51, 947
Eco57I	CTGAAG	4 cut(s)	284, 465, 1593, 1706
EcoICRI	GAGCTC	2 cut(s)	51, 947
EcoO109I	RGGNCCY	1 cut(s)	1222
EcoRII	CCWGG	2 cut(s)	1392, 1553
EcoRV	GATATC	1 cut(s)	1180
EcoT14I	CCWWGG	1 cut(s)	1226
EcoT22I	ATGCAT	1 cut(s)	2209
EcoT38I	GRGCYC	3 cut(s)	53, 867, 949
ErhI	CCWWGG	1 cut(s)	1226
Esp3I	CGTCTC	2 cut(s)	737, 2260
FalI	AAGNNNNNCTT	2 cut(s)	201, 233
FaqI	GGGAC	3 cut(s)	1775, 2098, 2309
FauNDI	CATATG	1 cut(s)	1068
FbaI	TGATCA	1 cut(s)	138
FblI	GTMKAC	2 cut(s)	1355, 2016
Fnu4HI	GCNGC	8 cut(s)	59, 535, 894, 1212, 1627, 1749, 2304, 2334
FriOI	GRGCYC	3 cut(s)	53, 867, 949
Fsp4HI	GCNGC	8 cut(s)	59, 535, 894, 1212, 1627, 1749, 2304, 2334
FspBI	CTAG	4 cut(s)	566, 687, 1712, 1886
GlaI	GCGC	2 cut(s)	297, 2182
GluI	GCNGC	8 cut(s)	59, 535, 894, 1212, 1627, 1749, 2304, 2334
GsaI	CCCAGC	1 cut(s)	864
GsuI	CTGGAG	1 cut(s)	963
HaeII	RGCGCY	1 cut(s)	2184
HaeIII	GGCC	7 cut(s)	122, 305, 865, 975, 1062, 1223, 1405
HapII	CCGG	6 cut(s)	82, 109, 123, 1039, 1406, 2010
HhaI	GCGC	2 cut(s)	298, 2183
Hin1I	GRCGYC	1 cut(s)	746
Hin6I	GCGC	2 cut(s)	296, 2181
HinP1I	GCGC	2 cut(s)	296, 2181
HindIII	AAGCTT	1 cut(s)	595
HpaII	CCGG	6 cut(s)	82, 109, 123, 1039, 1406, 2010
HphI	GGTGA	6 cut(s)	98, 137, 142, 293, 1271, 1382
Hpy166II	GTNNAC	8 cut(s)	164, 666, 797, 1356, 2017, 2054, 2114, 2169
Hpy188III	TCNNGA	9 cut(s)	425, 874, 1025, 1039, 1334, 1681, 2037, 2234, 2263
Hpy8I	GTNNAC	8 cut(s)	164, 666, 797, 1356, 2017, 2054, 2114, 2169
HpyCH4IV	ACGT	2 cut(s)	746, 840
HpyF10VI	GCNNNNNNNGC	6 cut(s)	302, 902, 1220, 1280, 1771, 1879
HpyF3I	CTNAG	9 cut(s)	45, 1622, 1737, 1766, 1911, 1928, 2117, 2288, 2307
HpySE526I	ACGT	2 cut(s)	746, 840
Hsp92I	GRCGYC	1 cut(s)	746
HspAI	GCGC	2 cut(s)	296, 2181
Kpn2I	TCCGGA	1 cut(s)	1038
KroI	GCCGGC	1 cut(s)	81
KroNI	GCCGGC	1 cut(s)	83
Ksp22I	TGATCA	1 cut(s)	138
LguI	GCTCTTC	1 cut(s)	762
Lsp1109I	GCAGC	7 cut(s)	45, 546, 905, 1198, 1760, 2290, 2320
LweI	GCATC	3 cut(s)	283, 1914, 2268
MaeI	CTAG	4 cut(s)	566, 687, 1712, 1886
MaeII	ACGT	2 cut(s)	746, 840
MaeIII	GTNAC	2 cut(s)	1139, 1531
MfeI	CAATTG	1 cut(s)	309
MflI	RGATCY	3 cut(s)	778, 823, 1819
MhlI	GDGCHC	5 cut(s)	53, 867, 907, 949, 1488
MlsI	TGGCCA	2 cut(s)	975, 1062
MluCI	AATT	8 cut(s)	243, 309, 606, 1009, 1460, 1641, 1797, 2215
MluNI	TGGCCA	2 cut(s)	975, 1062
MlyI	GAGTC	6 cut(s)	142, 671, 1044, 1118, 2109, 2162
MmeI	TCCRAC	1 cut(s)	1456
Mox20I	TGGCCA	2 cut(s)	975, 1062
Mph1103I	ATGCAT	1 cut(s)	2209
MroI	TCCGGA	1 cut(s)	1038
MroNI	GCCGGC	1 cut(s)	81
MroXI	GAANNNNTTC	1 cut(s)	573
MscI	TGGCCA	2 cut(s)	975, 1062
MseI	TTAA	5 cut(s)	639, 1184, 1563, 1635, 1796
MslI	CAYNNNNRTG	1 cut(s)	887
Msp20I	TGGCCA	2 cut(s)	975, 1062
MspA1I	CMGCKG	1 cut(s)	1626
MspI	CCGG	6 cut(s)	82, 109, 123, 1039, 1406, 2010
MspR9I	CCNGG	2 cut(s)	1394, 1555
MunI	CAATTG	1 cut(s)	309
MvaI	CCWGG	2 cut(s)	1394, 1555
MwoI	GCNNNNNNNGC	6 cut(s)	302, 902, 1220, 1280, 1771, 1879
NaeI	GCCGGC	1 cut(s)	83
NdeI	CATATG	1 cut(s)	1068
NgoMIV	GCCGGC	1 cut(s)	81
NlaIV	GGNNCC	7 cut(s)	86, 648, 825, 865, 996, 1224, 1821
NmeAIII	GCCGAG	1 cut(s)	946
NmuCI	GTSAC	1 cut(s)	1139
NsiI	ATGCAT	1 cut(s)	2209
NspI	RCATGY	3 cut(s)	677, 776, 1235
PagI	TCATGA	1 cut(s)	873
PciSI	GCTCTTC	1 cut(s)	762
PcsI	WCGNNNNNNNCGW	1 cut(s)	85
PdiI	GCCGGC	1 cut(s)	83
PdmI	GAANNNNTTC	1 cut(s)	573
PfeI	GAWTC	8 cut(s)	90, 284, 437, 455, 710, 1660, 1855, 2259
PflFI	GACNNNGTC	1 cut(s)	1958
PflMI	CCANNNNNTGG	1 cut(s)	1069
PkrI	GCNGC	8 cut(s)	60, 536, 895, 1213, 1628, 1750, 2305, 2335
PleI	GAGTC	6 cut(s)	141, 670, 1043, 1118, 2109, 2161
PpsI	GAGTC	6 cut(s)	141, 670, 1043, 1118, 2109, 2161
Psp124BI	GAGCTC	2 cut(s)	53, 949
Psp6I	CCWGG	2 cut(s)	1392, 1553
PspFI	CCCAGC	1 cut(s)	860
PspGI	CCWGG	2 cut(s)	1392, 1553
PspN4I	GGNNCC	7 cut(s)	86, 648, 825, 865, 996, 1224, 1821
PspOMI	GGGCCC	1 cut(s)	863
PspPI	GGNCC	8 cut(s)	120, 705, 863, 864, 1222, 1362, 1403, 1450
PstI	CTGCAG	1 cut(s)	556
PstNI	CAGNNNCTG	1 cut(s)	1927
PsuI	RGATCY	3 cut(s)	778, 823, 1819
PsyI	GACNNNGTC	1 cut(s)	1958
RsaI	GTAC	5 cut(s)	403, 1328, 2130, 2240, 2342
RsaNI	GTAC	5 cut(s)	402, 1327, 2129, 2239, 2341
RseI	CAYNNNNRTG	1 cut(s)	887
SacI	GAGCTC	2 cut(s)	53, 949
SapI	GCTCTTC	1 cut(s)	762
SaqAI	TTAA	5 cut(s)	639, 1184, 1563, 1635, 1796
SatI	GCNGC	8 cut(s)	59, 535, 894, 1212, 1627, 1749, 2304, 2334
Sau96I	GGNCC	8 cut(s)	120, 705, 863, 864, 1222, 1362, 1403, 1450
ScaI	AGTACT	1 cut(s)	403
SchI	GAGTC	6 cut(s)	142, 671, 1044, 1118, 2109, 2162
ScrFI	CCNGG	2 cut(s)	1394, 1555
SduI	GDGCHC	5 cut(s)	53, 867, 907, 949, 1488
SfaNI	GCATC	3 cut(s)	283, 1914, 2268
SfcI	CTRYAG	3 cut(s)	405, 552, 1983
SgrAI	CRCCGGYG	1 cut(s)	108
SinI	GGWCC	3 cut(s)	705, 1362, 1450
SmiMI	CAYNNNNRTG	1 cut(s)	887
SmlI	CTYRAG	2 cut(s)	1023, 1681
SmoI	CTYRAG	2 cut(s)	1023, 1681
SpeI	ACTAGT	2 cut(s)	686, 1885
Sse9I	AATT	8 cut(s)	243, 309, 606, 1009, 1460, 1641, 1797, 2215
SsiI	CCGC	3 cut(s)	112, 1189, 1626
SspMI	CTAG	4 cut(s)	566, 687, 1712, 1886
SstI	GAGCTC	2 cut(s)	53, 949
StyD4I	CCNGG	2 cut(s)	1392, 1553
StyI	CCWWGG	1 cut(s)	1226
TaiI	ACGT	2 cut(s)	749, 843
TaqI	TCGA	4 cut(s)	834, 914, 1333, 2233
TasI	AATT	8 cut(s)	243, 309, 606, 1009, 1460, 1641, 1797, 2215
TatI	WGTACW	3 cut(s)	401, 2128, 2238
TauI	GCSGC	1 cut(s)	1629
TfiI	GAWTC	8 cut(s)	90, 284, 437, 455, 710, 1660, 1855, 2259
Tru1I	TTAA	5 cut(s)	639, 1184, 1563, 1635, 1796
Tru9I	TTAA	5 cut(s)	639, 1184, 1563, 1635, 1796
TscAI	CASTG	6 cut(s)	148, 1308, 1317, 1619, 1745, 1906
TseFI	GTSAC	1 cut(s)	1139
TseI	GCWGC	7 cut(s)	58, 534, 893, 1211, 1748, 2303, 2333
Tsp45I	GTSAC	1 cut(s)	1139
TspDTI	ATGAA	9 cut(s)	636, 777, 890, 1108, 1267, 1620, 1795, 2090, 2090
TspGWI	ACGGA	6 cut(s)	836, 897, 1127, 1176, 1769, 1848
TspRI	CASTG	6 cut(s)	148, 1308, 1317, 1619, 1745, 1906
Tth111I	GACNNNGTC	1 cut(s)	1958
Van91I	CCANNNNNTGG	1 cut(s)	1069
VpaK11BI	GGWCC	3 cut(s)	705, 1362, 1450
XceI	RCATGY	3 cut(s)	677, 776, 1235
XmiI	GTMKAC	2 cut(s)	1355, 2016
XmnI	GAANNNNTTC	1 cut(s)	573
XspI	CTAG	4 cut(s)	566, 687, 1712, 1886
ZraI	GACGTC	1 cut(s)	747
ZrmI	AGTACT	1 cut(s)	403
Zsp2I	ATGCAT	1 cut(s)	2209

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.