AT3G01610

Cell division control protein 48 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0009020
Physical Location & Seq
Forward (+)
231610 .. 235279
3670 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G01610.2

Sequence Viewer

Length: 2463 bp
ATGGGGAGGAGAGGTCGCGGCGGCGGCGGTGGTATGGGCGGAGGAATCAATCGTAGATATCTGAGTCAAGTTATGGATACGTGCGGCAAGGATTTATCTACGGCGGAGGACATCGTTGATGATCTTCGTTCCAGGTACGGCAATTTTGCGAGGTTGACTCGGCAAGTGCTTCTACTCAATGTCAGGCAAGTCCTTAATGTTAGAAACAACAAGAGGGTTAAAGACGAAGATGAAGATGACAACATTGGAGATGAGGAAGGTTCTGCTTCTCAGAGGAAGAAACAGAGACGGGTTGATGAGAAAGAGGAGAAATTGCAGCGAGCGGAGCAGTCGCATTTAAGGAAGAGGAATATGGAACGTTCAGTGTCTTCTTCTCCGTCTTCTTCTTCTTCTTCGGAAGACAGTGGTGATGTGTCGACTTCTGAGGACGCGGTTTATGGCGAGAAGCTGAGTCCGCCGCGGTTTGATCTGATCAATGACAGTCTAAGAGATAACTACGCTAAGTTGAACAGCTCCTCGAAGAAACCAATTGGGTCGCCTGCGGAAAAGAATGTGGAAGTTGAGACTGTGAGCAACAAAGGTAGAAGCAAGTTGGCTACAATGGGGGCCAGAAAGGAGGCTAAAGTTTCTCTTTCCCTCAGTGGAGCTACTGGTAATGGTGATTTGGAAGTTGAGGGTACTAAAGGACCTACTTTTAAAGACTTTGGTGGGATTAAGAAAATATTGGATGAATTGGAGATGAATGTTCTATTCCCCATTCTCAATCCTGAGCCGTTTAAGAAGATTGGAGTGAAGCCACCAAGTGGGATTCTATTTCATGGACCACCTGGCTGTGGGAAGACTAAGTTGGCCAATGCCATTGCCAATGAAGCTGGTGTTCCGTTTTATAAGATTTCAGCCACAGAGGTGATTTCTGGTGTTTCTGGTGCTTCTGAAGAGAATATCAGAGAGCTCTTTTCTAAAGCATATAGGACTGCGCCTTCGATTGTGTTTATCGATGAGATTGATGCGATTGGTTCAAAGAGAGAGAATCAGCAAAGAGAGATGGAGAAGCGGATAGTAACACAATTGTTGACTTGTATGGATGGACCTGGTAACAAAGGCGATAAAAATGCTCCTGATTCTAGTGCTGGTTTTGTTCTTGTCATTGGAGCTACAAATAGGCCTGATGCTCTTGATCCTGCTTTGAGGAGAAGTGGACGATTTGAAACTGAGATCGCTCTAACTGCTCCAGATGAAGACGCAAGGGCTGAGATACTCTCTGTTGTAGCCCAAAAACTTAGATTAGAAGGACCCTTTGACAAGAAAAGAATAGCTCGTTTAACACCGGGTTTTGTTGGAGCTGATTTGGAGAGTGTTGCTTACTTGGCTGGCAGGAAAGCCATTAAGAGAATCTTGGATTCAAGGAAATCTGAACAGTCTGGGGACGGTGAAGACGATAAATCTTGGCTGAGGATGCCCTGGCCAGAAGAAGAGTTGGAAAAGCTCTTTGTCAAAATGTCTGATTTCGAGGAAGCAGTGAATCTAGTTCAGGCATCTTTAACAAGAGAAGGATTCTCTATCGTGCCTGATGTCAAGTGGGATGATGTTGGTGGACTTGACCATCTACGACTTCAATTCAACCGTTATATAGTGAGGCCTATCAAAAAGCCTGATATTTATAAGGCTTTTGGGGTAGACTTAGAGACAGGGTTTTTGCTCTATGGACCACCGGGTTGTGGCAAGACATTGATTGCAAAGGCAGCTGCTAACGAGGCTGGAGCTAATTTCATGCACATCAAGGGTGCCGAACTTCTAAATAAATACGTTGGAGAAAGTGAGCTTGCTATTCGTACGTTGTTTCAGCGAGCTCGGACATGTGCACCATGTGTAATCTTCTTTGATGAGGTGGATGCTTTGACAACAAGTCGTGGCAAAGAAGGTGCTTGGGTTGTTGAACGGCTTTTGAACCAGTTTCTTGTTGAGCTGGATGGTGGAGAGAGGCGTAATGTATATGTAATTGGAGCTACAAACAGGCCAGATGTAGTTGATCCTGCTTTCTTGAGACCGGGTAGATTTGGGAATCTTCTTTATGTACCCCTCCCCAACGCAGATGAGCGTGCTTCAATTCTAAAAGCTATTGCAAGGAAGAAACCGATAGATCCTAGTGTTGATCTGGATGGAATTGCAAAGAATAACTGTGAAGGTTTCAGCGGAGCTGATCTCGCACACTTGGTGCAAAAAGCTACATTCCAAGCAGTGGAGGAGATGATAGGCTCCAGTGAGTCGTCTGAAGATGATGTTACAGATATAACGCAGTGTACAATCAAGACGAGGCATTTCGAGCAAGCCTTGTCCTTAGTCTCACCATCTGTGAACAAACAGCAAAGAAGACACTATGACGCACTATCAACAAAGCTTCAAGAAAGCGTTGGGAGGAACACTGAACAAGTCACCATAGGGCCATCTTTTACCCTCGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03008 map03008
Pfam Domains
Protein Families
AAA Nucleolin_bd

Protein Analysis

820

Amino Acids

90.0

Weight (kDa)

6.21

Isoelectric Point (pI)

46.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RuvB_N PF05496 268 - 397 2.2e-06 Holliday junction DNA helicase RuvB P-loop domain
AAA PF00004 270 - 408 8.3e-42 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 434 - 468 1.8e-08 AAA+ lid domain
AAA PF00004 566 - 694 2.7e-41 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 716 - 755 1.9e-08 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 888, 1662
AccB1I GGYRCC 1 cut(s) 1784
AccB7I CCANNNNNTGG 2 cut(s) 803, 2239
AccBSI CCGCTC 1 cut(s) 323
AccI GTMKAC 2 cut(s) 416, 1677
AccII CGCG 3 cut(s) 18, 431, 460
AclI AACGTT 1 cut(s) 358
AclWI GGATC 3 cut(s) 1172, 2024, 2135
AcoI YGGCCR 2 cut(s) 849, 1463
AcuI CTGAAG 2 cut(s) 954, 2292
AdeI CACNNNGTG 3 cut(s) 803, 1868, 2215
AfaI GTAC 5 cut(s) 137, 679, 1834, 2076, 2302
AfiI CCNNNNNNNGG 4 cut(s) 803, 833, 1718, 2239
AflIII ACRYGT 1 cut(s) 1856
AhdI GACNNNNNGTC 1 cut(s) 1905
AjnI CCWGG 4 cut(s) 131, 826, 1090, 1460
AjuI GAANNNNNNNTTGG 2 cut(s) 830, 862
AleI CACNNNNGTG 1 cut(s) 905
Alw21I GWGCWC 3 cut(s) 954, 1852, 1864
Alw26I GTCTC 5 cut(s) 280, 557, 1679, 2038, 2347
Alw44I GTGCAC 1 cut(s) 1860
AlwI GGATC 3 cut(s) 1172, 2024, 2135
Ama87I CYCGRG 1 cut(s) 2456
AoxI GGCC 7 cut(s) 606, 849, 1163, 1463, 1637, 2015, 2441
ApaLI GTGCAC 1 cut(s) 1860
ApeKI GCWGC 3 cut(s) 316, 1742, 1745
ArsI GACNNNNNNTTYG 4 cut(s) 964, 996, 1678, 1710
AspLEI GCGC 1 cut(s) 979
AspS9I GGNCC 7 cut(s) 606, 686, 821, 1088, 1292, 1706, 2441
AsuC2I CCSGG 3 cut(s) 1329, 1713, 2049
AsuHPI GGTGA 6 cut(s) 419, 671, 919, 1442, 2337, 2425
AvaI CYCGRG 1 cut(s) 2456
AvaII GGWCC 5 cut(s) 686, 821, 1088, 1292, 1706
BaeGI GKGCMC 1 cut(s) 1864
BalI TGGCCA 2 cut(s) 851, 1465
BanI GGYRCC 1 cut(s) 1784
BanII GRGCYC 2 cut(s) 954, 1852
BbsI GAAGAC 7 cut(s) 360, 372, 405, 845, 1245, 1440, 2377
Bbv12I GWGCWC 3 cut(s) 954, 1852, 1864
BbvCI CCTCAGC 1 cut(s) 1451
BbvI GCAGC 3 cut(s) 328, 1732, 1754
BccI CCATC 7 cut(s) 1039, 1079, 1611, 1964, 2153, 2356, 2452
BceAI ACGGC 4 cut(s) 117, 154, 757, 1955
BcgI CGANNNNNNTGC 2 cut(s) 1094, 1128
BciT130I CCWGG 4 cut(s) 133, 828, 1092, 1462
BciVI GTATCC 1 cut(s) 70
BclI TGATCA 1 cut(s) 471
BcnI CCSGG 3 cut(s) 1329, 1713, 2049
BcoDI GTCTC 5 cut(s) 280, 557, 1679, 2038, 2347
BfaI CTAG 3 cut(s) 1125, 1526, 2145
BfuI GTATCC 1 cut(s) 70
BisI GCNGC 8 cut(s) 19, 22, 25, 85, 317, 458, 1743, 1746
BlsI GCNGC 8 cut(s) 20, 23, 26, 86, 318, 459, 1744, 1747
Bme1390I CCNGG 7 cut(s) 133, 828, 1092, 1329, 1462, 1713, 2049
Bme18I GGWCC 5 cut(s) 686, 821, 1088, 1292, 1706
BmeRI GACNNNNNGTC 1 cut(s) 1905
BmeT110I CYCGRG 1 cut(s) 2456
BmgT120I GGNCC 7 cut(s) 606, 686, 821, 1088, 1292, 1706, 2441
BmiI GGNNCC 4 cut(s) 607, 1294, 1786, 2257
BmrFI CCNGG 7 cut(s) 133, 828, 1092, 1329, 1462, 1713, 2049
BmsI GCATC 5 cut(s) 997, 1159, 1446, 1544, 1882
BpiI GAAGAC 7 cut(s) 360, 372, 405, 845, 1245, 1440, 2377
BplI GAGNNNNNCTC 6 cut(s) 142, 174, 1244, 1276, 2187, 2219
BpmI CTGGAG 3 cut(s) 1215, 1779, 2242
Bpu10I CCTNAGC 2 cut(s) 768, 1451
BpuEI CTTGAG 1 cut(s) 2062
BpuMI CCSGG 3 cut(s) 1329, 1713, 2049
Bsa29I ATCGAT 1 cut(s) 996
BsaAI YACGTR 1 cut(s) 81
BsaI GGTCTC 1 cut(s) 2038
BsaJI CCNNGG 2 cut(s) 458, 1460
BsaXI ACNNNNNCTCC 1 cut(s) 28
Bsc4I CCNNNNNNNGG 4 cut(s) 803, 833, 1718, 2239
Bse1I ACTGG 3 cut(s) 655, 1951, 2259
Bse3DI GCAATG 1 cut(s) 858
BseBI CCWGG 4 cut(s) 133, 828, 1092, 1462
BseCI ATCGAT 1 cut(s) 996
BseDI CCNNGG 2 cut(s) 458, 1460
BseGI GGATG 7 cut(s) 733, 1090, 1461, 1588, 1897, 1975, 2164
BseLI CCNNNNNNNGG 4 cut(s) 803, 833, 1718, 2239
BseMI GCAATG 1 cut(s) 858
BseMII CTCAG 9 cut(s) 53, 284, 414, 440, 652, 759, 1203, 1242, 1442
BseNI ACTGG 3 cut(s) 655, 1951, 2259
BseRI GAGGAG 5 cut(s) 22, 320, 505, 1204, 2258
BseSI GKGCMC 1 cut(s) 1864
BseXI GCAGC 3 cut(s) 328, 1732, 1754
Bsh1236I CGCG 3 cut(s) 18, 431, 460
BshFI GGCC 7 cut(s) 608, 851, 1165, 1465, 1639, 2017, 2443
BshNI GGYRCC 1 cut(s) 1784
BshVI ATCGAT 1 cut(s) 996
BsiHKAI GWGCWC 3 cut(s) 954, 1852, 1864
BsiHKCI CYCGRG 1 cut(s) 2456
BsiSI CCGG 3 cut(s) 1328, 1712, 2048
BsiWI CGTACG 1 cut(s) 1832
BslFI GGGAC 1 cut(s) 1439
BslI CCNNNNNNNGG 4 cut(s) 803, 833, 1718, 2239
BsmAI GTCTC 5 cut(s) 280, 557, 1679, 2038, 2347
BsmBI CGTCTC 1 cut(s) 280
BsmFI GGGAC 1 cut(s) 1439
BsnI GGCC 7 cut(s) 608, 851, 1165, 1465, 1639, 2017, 2443
Bso31I GGTCTC 1 cut(s) 2038
BsoBI CYCGRG 1 cut(s) 2456
Bsp1286I GDGCHC 3 cut(s) 954, 1852, 1864
Bsp1407I TGTACA 1 cut(s) 2300
Bsp143I GATC 9 cut(s) 121, 466, 471, 1177, 1215, 2029, 2140, 2152, 2200
BspANI GGCC 7 cut(s) 608, 851, 1165, 1465, 1639, 2017, 2443
BspCNI CTCAG 9 cut(s) 54, 283, 415, 441, 651, 760, 1204, 1243, 1443
BspDI ATCGAT 1 cut(s) 996
BspFNI CGCG 3 cut(s) 18, 431, 460
BspLI GGNNCC 4 cut(s) 607, 1294, 1786, 2257
BspPI GGATC 3 cut(s) 1172, 2024, 2135
BspT107I GGYRCC 1 cut(s) 1784
BspTNI GGTCTC 1 cut(s) 2038
BsrBI CCGCTC 1 cut(s) 323
BsrDI GCAATG 1 cut(s) 858
BsrGI TGTACA 1 cut(s) 2300
BsrI ACTGG 3 cut(s) 655, 1951, 2259
BssECI CCNNGG 2 cut(s) 458, 1460
BssMI GATC 9 cut(s) 121, 466, 471, 1177, 1215, 2029, 2140, 2152, 2200
Bst2UI CCWGG 4 cut(s) 133, 828, 1092, 1462
Bst4CI ACNGT 7 cut(s) 404, 482, 568, 1419, 1430, 1625, 2180
Bst6I CTCTTC 3 cut(s) 338, 930, 1467
BstAUI TGTACA 1 cut(s) 2300
BstBAI YACGTR 1 cut(s) 81
BstC8I GCNNGC 7 cut(s) 321, 540, 1372, 1824, 1848, 2100, 2328
BstDSI CCRYGG 1 cut(s) 458
BstF5I GGATG 7 cut(s) 733, 1090, 1461, 1588, 1897, 1975, 2164
BstFNI CGCG 3 cut(s) 18, 431, 460
BstHHI GCGC 1 cut(s) 979
BstKTI GATC 9 cut(s) 124, 469, 474, 1180, 1218, 2032, 2143, 2155, 2203
BstMAI GTCTC 5 cut(s) 280, 557, 1679, 2038, 2347
BstMBI GATC 9 cut(s) 121, 466, 471, 1177, 1215, 2029, 2140, 2152, 2200
BstNI CCWGG 4 cut(s) 133, 828, 1092, 1462
BstNSI RCATGY 1 cut(s) 1860
BstSCI CCNGG 7 cut(s) 131, 826, 1090, 1327, 1460, 1711, 2047
BstSLI GKGCMC 1 cut(s) 1864
BstUI CGCG 3 cut(s) 18, 431, 460
BstV1I GCAGC 3 cut(s) 328, 1732, 1754
BstV2I GAAGAC 7 cut(s) 360, 372, 405, 845, 1245, 1440, 2377
BstX2I RGATCY 1 cut(s) 2140
BstYI RGATCY 1 cut(s) 2140
Bsu15I ATCGAT 1 cut(s) 996
BsuI GTATCC 1 cut(s) 70
BsuRI GGCC 7 cut(s) 608, 851, 1165, 1465, 1639, 2017, 2443
BsuTUI ATCGAT 1 cut(s) 996
BtgI CCRYGG 1 cut(s) 458
BtsCI GGATG 7 cut(s) 733, 1090, 1461, 1588, 1897, 1975, 2164
BtsI GCAGTG 3 cut(s) 1524, 2244, 2303
BtsIMutI CAGTG 8 cut(s) 369, 409, 646, 1524, 2244, 2266, 2303, 2421
Cac8I GCNNGC 7 cut(s) 321, 540, 1372, 1824, 1848, 2100, 2328
CfoI GCGC 1 cut(s) 979
Cfr13I GGNCC 7 cut(s) 606, 686, 821, 1088, 1292, 1706, 2441
Cfr42I CCGCGG 1 cut(s) 461
ClaI ATCGAT 1 cut(s) 996
CseI GACGC 3 cut(s) 437, 1250, 2390
CsiI ACCWGGT 1 cut(s) 1090
Csp6I GTAC 5 cut(s) 136, 678, 1833, 2075, 2301
CviAII CATG 4 cut(s) 818, 1771, 1857, 1866
CviQI GTAC 5 cut(s) 136, 678, 1833, 2075, 2301
DpnI GATC 9 cut(s) 123, 468, 473, 1179, 1217, 2031, 2142, 2154, 2202
DpnII GATC 9 cut(s) 121, 466, 471, 1177, 1215, 2029, 2140, 2152, 2200
DraI TTTAAA 1 cut(s) 697
DraIII CACNNNGTG 3 cut(s) 803, 1868, 2215
DriI GACNNNNNGTC 1 cut(s) 1905
EaeI YGGCCR 2 cut(s) 849, 1463
Eam1104I CTCTTC 3 cut(s) 338, 930, 1467
Eam1105I GACNNNNNGTC 1 cut(s) 1905
EarI CTCTTC 3 cut(s) 338, 930, 1467
EciI GGCGGA 3 cut(s) 54, 119, 444
Ecl136II GAGCTC 2 cut(s) 952, 1850
Eco147I AGGCCT 2 cut(s) 1165, 1639
Eco24I GRGCYC 2 cut(s) 954, 1852
Eco31I GGTCTC 1 cut(s) 2038
Eco32I GATATC 1 cut(s) 59
Eco47I GGWCC 5 cut(s) 686, 821, 1088, 1292, 1706
Eco53kI GAGCTC 2 cut(s) 952, 1850
Eco57I CTGAAG 2 cut(s) 954, 2292
Eco88I CYCGRG 1 cut(s) 2456
EcoICRI GAGCTC 2 cut(s) 952, 1850
EcoO109I RGGNCCY 2 cut(s) 686, 1292
EcoRII CCWGG 4 cut(s) 131, 826, 1090, 1460
EcoRV GATATC 1 cut(s) 59
EcoT38I GRGCYC 2 cut(s) 954, 1852
Esp3I CGTCTC 1 cut(s) 280
FaeI CATG 4 cut(s) 821, 1774, 1860, 1869
FalI AAGNNNNNCTT 4 cut(s) 615, 647, 1379, 1411
FaqI GGGAC 1 cut(s) 1439
FatI CATG 4 cut(s) 817, 1770, 1856, 1865
FbaI TGATCA 1 cut(s) 471
FblI GTMKAC 2 cut(s) 416, 1677
Fnu4HI GCNGC 8 cut(s) 19, 22, 25, 85, 317, 458, 1743, 1746
FokI GGATG 7 cut(s) 740, 1097, 1468, 1595, 1904, 1982, 2171
FriOI GRGCYC 2 cut(s) 954, 1852
Fsp4HI GCNGC 8 cut(s) 19, 22, 25, 85, 317, 458, 1743, 1746
FspBI CTAG 3 cut(s) 1125, 1526, 2145
GlaI GCGC 1 cut(s) 978
GluI GCNGC 8 cut(s) 19, 22, 25, 85, 317, 458, 1743, 1746
GsuI CTGGAG 3 cut(s) 1215, 1779, 2242
HaeIII GGCC 7 cut(s) 608, 851, 1165, 1465, 1639, 2017, 2443
HapII CCGG 3 cut(s) 1328, 1712, 2048
HgaI GACGC 3 cut(s) 437, 1250, 2390
HhaI GCGC 1 cut(s) 979
Hin1II CATG 4 cut(s) 821, 1774, 1860, 1869
Hin6I GCGC 1 cut(s) 977
HinP1I GCGC 1 cut(s) 977
HincII GTYRAC 3 cut(s) 156, 417, 1074
HindII GTYRAC 3 cut(s) 156, 417, 1074
HindIII AAGCTT 1 cut(s) 2396
HpaII CCGG 3 cut(s) 1328, 1712, 2048
HphI GGTGA 6 cut(s) 419, 671, 919, 1442, 2337, 2425
Hpy166II GTNNAC 9 cut(s) 156, 417, 1074, 1199, 1595, 1678, 1862, 2301, 2356
Hpy188III TCNNGA 8 cut(s) 767, 1118, 1175, 1232, 2041, 2156, 2308, 2402
Hpy8I GTNNAC 9 cut(s) 156, 417, 1074, 1199, 1595, 1678, 1862, 2301, 2356
HpyAV CCTTC 6 cut(s) 251, 990, 1283, 1544, 1913, 2177
HpyCH4III ACNGT 7 cut(s) 404, 482, 568, 1419, 1430, 1625, 2180
HpyCH4IV ACGT 4 cut(s) 80, 358, 1806, 1835
HpyCH4V TGCA 7 cut(s) 316, 1736, 1774, 1862, 2123, 2168, 2218
HpySE526I ACGT 4 cut(s) 80, 358, 1806, 1835
Hsp92II CATG 4 cut(s) 821, 1774, 1860, 1869
HspAI GCGC 1 cut(s) 977
Ksp22I TGATCA 1 cut(s) 471
KspI CCGCGG 1 cut(s) 461
Kzo9I GATC 9 cut(s) 121, 466, 471, 1177, 1215, 2029, 2140, 2152, 2200
Lsp1109I GCAGC 3 cut(s) 328, 1732, 1754
LweI GCATC 5 cut(s) 997, 1159, 1446, 1544, 1882
MabI ACCWGGT 1 cut(s) 1090
MaeI CTAG 3 cut(s) 1125, 1526, 2145
MaeII ACGT 4 cut(s) 80, 358, 1806, 1835
MaeIII GTNAC 4 cut(s) 1060, 1094, 2281, 2431
MalI GATC 9 cut(s) 123, 468, 473, 1179, 1217, 2031, 2142, 2154, 2202
MbiI CCGCTC 1 cut(s) 323
MboI GATC 9 cut(s) 121, 466, 471, 1177, 1215, 2029, 2140, 2152, 2200
MfeI CAATTG 2 cut(s) 528, 1067
MflI RGATCY 1 cut(s) 2140
MhlI GDGCHC 3 cut(s) 954, 1852, 1864
MlsI TGGCCA 2 cut(s) 851, 1465
MluNI TGGCCA 2 cut(s) 851, 1465
MlyI GAGTC 4 cut(s) 73, 151, 460, 2273
MmeI TCCRAC 3 cut(s) 1318, 1458, 1789
Mox20I TGGCCA 2 cut(s) 851, 1465
MscI TGGCCA 2 cut(s) 851, 1465
MseI TTAA 9 cut(s) 195, 219, 338, 696, 714, 777, 1322, 1386, 1541
MslI CAYNNNNRTG 1 cut(s) 905
Msp20I TGGCCA 2 cut(s) 851, 1465
MspA1I CMGCKG 3 cut(s) 460, 1745, 2193
MspI CCGG 3 cut(s) 1328, 1712, 2048
MspR9I CCNGG 7 cut(s) 133, 828, 1092, 1329, 1462, 1713, 2049
MunI CAATTG 2 cut(s) 528, 1067
MvaI CCWGG 4 cut(s) 133, 828, 1092, 1462
MvnI CGCG 3 cut(s) 18, 431, 460
NciI CCSGG 3 cut(s) 1329, 1713, 2049
NdeII GATC 9 cut(s) 121, 466, 471, 1177, 1215, 2029, 2140, 2152, 2200
NlaIII CATG 4 cut(s) 821, 1774, 1860, 1869
NlaIV GGNNCC 4 cut(s) 607, 1294, 1786, 2257
NmeAIII GCCGAG 1 cut(s) 139
NmuCI GTSAC 1 cut(s) 2431
NspI RCATGY 1 cut(s) 1860
OliI CACNNNNGTG 1 cut(s) 905
PaeR7I CTCGAG 1 cut(s) 2456
PceI AGGCCT 2 cut(s) 1165, 1639
PciI ACATGT 1 cut(s) 1856
PcsI WCGNNNNNNNCGW 1 cut(s) 1434
PfeI GAWTC 9 cut(s) 45, 808, 1030, 1121, 1392, 1400, 1522, 1554, 2062
Pfl23II CGTACG 1 cut(s) 1832
PflMI CCANNNNNTGG 2 cut(s) 803, 2239
PkrI GCNGC 8 cut(s) 20, 23, 26, 86, 318, 459, 1744, 1747
PleI GAGTC 4 cut(s) 72, 151, 459, 2272
PpsI GAGTC 4 cut(s) 72, 151, 459, 2272
Ppu21I YACGTR 1 cut(s) 81
PpuMI RGGWCCY 2 cut(s) 686, 1292
PscI ACATGT 1 cut(s) 1856
PsiI TTATAA 2 cut(s) 888, 1662
Psp124BI GAGCTC 2 cut(s) 954, 1852
Psp1406I AACGTT 1 cut(s) 358
Psp5II RGGWCCY 2 cut(s) 686, 1292
Psp6I CCWGG 4 cut(s) 131, 826, 1090, 1460
PspGI CCWGG 4 cut(s) 131, 826, 1090, 1460
PspLI CGTACG 1 cut(s) 1832
PspN4I GGNNCC 4 cut(s) 607, 1294, 1786, 2257
PspPI GGNCC 7 cut(s) 606, 686, 821, 1088, 1292, 1706, 2441
PspPPI RGGWCCY 2 cut(s) 686, 1292
PspXI VCTCGAGB 1 cut(s) 2456
PsuI RGATCY 1 cut(s) 2140
PvuII CAGCTG 1 cut(s) 1745
RsaI GTAC 5 cut(s) 137, 679, 1834, 2076, 2302
RsaNI GTAC 5 cut(s) 136, 678, 1833, 2075, 2301
RseI CAYNNNNRTG 1 cut(s) 905
SacI GAGCTC 2 cut(s) 954, 1852
SacII CCGCGG 1 cut(s) 461
SalI GTCGAC 1 cut(s) 415
SaqAI TTAA 9 cut(s) 195, 219, 338, 696, 714, 777, 1322, 1386, 1541
SatI GCNGC 8 cut(s) 19, 22, 25, 85, 317, 458, 1743, 1746
Sau3AI GATC 9 cut(s) 121, 466, 471, 1177, 1215, 2029, 2140, 2152, 2200
Sau96I GGNCC 7 cut(s) 606, 686, 821, 1088, 1292, 1706, 2441
SchI GAGTC 4 cut(s) 73, 151, 460, 2273
ScrFI CCNGG 7 cut(s) 133, 828, 1092, 1329, 1462, 1713, 2049
SduI GDGCHC 3 cut(s) 954, 1852, 1864
SexAI ACCWGGT 1 cut(s) 1090
SfaNI GCATC 5 cut(s) 997, 1159, 1446, 1544, 1882
Sfr274I CTCGAG 1 cut(s) 2456
Sfr303I CCGCGG 1 cut(s) 461
SgrBI CCGCGG 1 cut(s) 461
SinI GGWCC 5 cut(s) 686, 821, 1088, 1292, 1706
SlaI CTCGAG 1 cut(s) 2456
SmiMI CAYNNNNRTG 1 cut(s) 905
SmlI CTYRAG 2 cut(s) 2041, 2456
SmoI CTYRAG 2 cut(s) 2041, 2456
SseBI AGGCCT 2 cut(s) 1165, 1639
SspI AATATT 1 cut(s) 723
SspMI CTAG 3 cut(s) 1125, 1526, 2145
SstI GAGCTC 2 cut(s) 954, 1852
StuI AGGCCT 2 cut(s) 1165, 1639
StyD4I CCNGG 7 cut(s) 131, 826, 1090, 1327, 1460, 1711, 2047
TaaI ACNGT 7 cut(s) 404, 482, 568, 1419, 1430, 1625, 2180
TaiI ACGT 4 cut(s) 83, 361, 1809, 1838
TaqI TCGA 7 cut(s) 416, 518, 983, 996, 1509, 2322, 2457
TatI WGTACW 1 cut(s) 2300
TauI GCSGC 5 cut(s) 21, 24, 27, 87, 460
TfiI GAWTC 9 cut(s) 45, 808, 1030, 1121, 1392, 1400, 1522, 1554, 2062
Tru1I TTAA 9 cut(s) 195, 219, 338, 696, 714, 777, 1322, 1386, 1541
Tru9I TTAA 9 cut(s) 195, 219, 338, 696, 714, 777, 1322, 1386, 1541
TscAI CASTG 8 cut(s) 369, 409, 646, 1524, 2244, 2266, 2303, 2428
TseFI GTSAC 1 cut(s) 2431
TseI GCWGC 3 cut(s) 316, 1742, 1745
Tsp45I GTSAC 1 cut(s) 2431
TspDTI ATGAA 7 cut(s) 246, 744, 755, 806, 882, 1251, 1759
TspGWI ACGGA 2 cut(s) 366, 870
TspRI CASTG 8 cut(s) 369, 409, 646, 1524, 2244, 2266, 2303, 2428
Van91I CCANNNNNTGG 2 cut(s) 803, 2239
VneI GTGCAC 1 cut(s) 1860
VpaK11BI GGWCC 5 cut(s) 686, 821, 1088, 1292, 1706
XceI RCATGY 1 cut(s) 1860
XhoI CTCGAG 1 cut(s) 2456
XmiI GTMKAC 2 cut(s) 416, 1677
XspI CTAG 3 cut(s) 1125, 1526, 2145
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.