AT3G03250

UTP--glucose-1-phosphate uridylyltransferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
749309 .. 754161
4853 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G03250.3

Sequence Viewer

Length: 1410 bp
ATGGCCGCCACCACTGAGAATCTCCCTCAACTCAAATCCGCCGTCGATGGCCTTACTGAGATGAGTGAGAGTGAGAAGAGCGGATTCATCAGCCTGGTTTCACGTTACCTGAGCGGTGAGGCACAACACATTGAGTGGAGTAAGATCCAGACTCCTACCGATGAAATCGTTGTTCCCTACGAGAAAATGACCCCTGTCTCCCAAGATGTTGCCGAGACCAAGAATCTGTTGGACAAACTTGTTGTGTTGAAGCTTAATGGAGGTCTTGGAACAACAATGGGATGCACTGGCCCGAAGTCCGTTATCGAAGTTCGTGATGGTTTGACATTTCTTGATCTGATTGTTATCCAGATTGAGAATCTCAACAACAAGTATGGCTGCAAGGTTCCGTTAGTTCTCATGAACTCGTTTAATACACATGATGACACACATAAGATTGTGGAAAAGTACACCAACTCAAATGTTGACATTCACACTTTTAACCAGAGCAAATATCCCCGTGTTGTGGCAGATGAGTTTGTGCCATGGCCCAGCAAGGGAAAGACCGACAAGGAGGGCTGGTATCCTCCCGGTCATGGTGATGTATTCCCAGCCCTCATGAACAGTGGAAAGCTCGATACTTTCTTATCACAGGGTAAGGAATATGTGTTTGTTGCCAATTCAGACAACTTGGGTGCCATCGTTGACTTAACAATCCTGAAGCATTTGATCCAGAACAAGAACGAATACTGCATGGAGGTTACACCCAAAACCTTAGCTGATGTAAAGGGGGGAACTCTCATTTCTTATGAAGGCAAAGTCCAGCTTCTGGAGATTGCTCAGGTTCCTGATGAACATGTCAATGAGTTCAAATCAATTGAGAAGTTCAAGATATTCAACACAAACAACCTATGGGTTAACTTGAAGGCCATCAAAAAGCTTGTGGAAGCTGATGCACTTAAAATGGAGATCATTCCAAACCCAAAGGAAGTTGATGGAGTCAAAGTTCTTCAACTGGAAACTGCAGCCGGTGCTGCGATAAGGTTCTTTGACAACGCTATCGGTGTTAATGTACCTCGCTCACGGTTCTTGCCAGTGAAGGCAAGTTCAGACTTGCTGCTCGTCCAGTCTGATCTCTACACCTTAGTTGATGGCTTTGTCACTCGAAACAAAGCTAGAACTAACCCCTCGAACCCGTCAATTGAATTGGGACCCGAGTTCAAGAAGGTGGCTACTTTCTTGAGCCGGTTTAAGTCCATTCCTAGTATAGTCGAGCTCGACAGCCTTAAGGTGTCTGGTGATGTCTGGTTTGGCTCTTCCATTGTTCTCAAGGGCAAGGTGACTGTGGCGGCAAAATCCGGTGTGAAGCTTGAAATTCCGGACAGGGCCGTGGTCGAGAACAAGAACATCAATGGTCCAGAAGACCTCTGA

Protein Analysis

469

Amino Acids

51.74

Weight (kDa)

5.8

Isoelectric Point (pI)

27.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGP PF01704 28 - 437 1e-183 UTP--glucose-1-phosphate uridylyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 674
AccB7I CCANNNNNTGG 1 cut(s) 808
AccBSI CCGCTC 2 cut(s) 81, 114
AccIII TCCGGA 1 cut(s) 1357
AciI CCGC 5 cut(s) 6, 39, 81, 114, 1328
AclWI GGATC 2 cut(s) 139, 703
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 1353
AcuI CTGAAG 1 cut(s) 719
AfaI GTAC 2 cut(s) 449, 1053
AfiI CCNNNNNNNGG 4 cut(s) 505, 536, 575, 808
AflII CTTAAG 1 cut(s) 1265
AflIII ACRYGT 1 cut(s) 835
AgsI TTSAA 9 cut(s) 250, 850, 868, 877, 904, 992, 1184, 1201, 1352
AjnI CCWGG 1 cut(s) 93
AloI GAACNNNNNNTCC 2 cut(s) 969, 1001
AluBI AGCT 9 cut(s) 253, 613, 758, 805, 919, 929, 1154, 1255, 1348
AluI AGCT 9 cut(s) 253, 613, 758, 805, 919, 929, 1154, 1255, 1348
Alw21I GWGCWC 1 cut(s) 1257
Alw26I GTCTC 2 cut(s) 202, 209
AlwI GGATC 2 cut(s) 139, 703
AlwNI CAGNNNCTG 1 cut(s) 808
Ama87I CYCGRG 1 cut(s) 1193
Aor13HI TCCGGA 1 cut(s) 1357
AoxI GGCC 6 cut(s) 3, 49, 289, 527, 906, 1365
ApeKI GCWGC 4 cut(s) 378, 1004, 1013, 1096
ApoI RAATTY 1 cut(s) 1353
ArsI GACNNNNNNTTYG 2 cut(s) 27, 59
AspS9I GGNCC 5 cut(s) 290, 528, 1190, 1365, 1394
AsuC2I CCSGG 1 cut(s) 570
AsuHPI GGTGA 4 cut(s) 128, 590, 1289, 1330
AvaI CYCGRG 1 cut(s) 1193
AvaII GGWCC 2 cut(s) 1190, 1394
BanI GGYRCC 1 cut(s) 674
BanII GRGCYC 1 cut(s) 1257
Bbv12I GWGCWC 1 cut(s) 1257
BbvI GCAGC 4 cut(s) 365, 1000, 1016, 1083
BccI CCATC 6 cut(s) 41, 311, 686, 917, 968, 1124
BceAI ACGGC 2 cut(s) 26, 1352
BciT130I CCWGG 1 cut(s) 95
BciVI GTATCC 1 cut(s) 573
BcnI CCSGG 1 cut(s) 570
BcoDI GTCTC 2 cut(s) 202, 209
BfaI CTAG 2 cut(s) 1155, 1242
BfmI CTRYAG 1 cut(s) 1002
BfrI CTTAAG 1 cut(s) 1265
BfuI GTATCC 1 cut(s) 573
BisI GCNGC 6 cut(s) 6, 379, 1005, 1014, 1097, 1329
BlsI GCNGC 6 cut(s) 7, 380, 1006, 1015, 1098, 1330
Bme1390I CCNGG 2 cut(s) 95, 570
Bme18I GGWCC 2 cut(s) 1190, 1394
BmeT110I CYCGRG 1 cut(s) 1193
BmgT120I GGNCC 5 cut(s) 290, 528, 1190, 1365, 1394
BmiI GGNNCC 5 cut(s) 387, 676, 825, 1191, 1192
BmrFI CCNGG 2 cut(s) 95, 570
BmsI GCATC 2 cut(s) 272, 922
BoxI GACNNNNGTC 1 cut(s) 194
BpmI CTGGAG 1 cut(s) 830
Bpu10I CCTNAGC 3 cut(s) 110, 754, 819
BpuEI CTTGAG 2 cut(s) 1240, 1292
BpuMI CCSGG 1 cut(s) 570
BsaBI GATNNNNATC 1 cut(s) 344
BsaI GGTCTC 1 cut(s) 209
BsaJI CCNNGG 2 cut(s) 524, 1368
BsaWI WCCGGW 2 cut(s) 1337, 1357
BsaXI ACNNNNNCTCC 4 cut(s) 545, 575, 969, 999
Bsc4I CCNNNNNNNGG 4 cut(s) 505, 536, 575, 808
Bse118I RCCGGY 2 cut(s) 1007, 1224
Bse1I ACTGG 4 cut(s) 292, 999, 1073, 1105
Bse8I GATNNNNATC 1 cut(s) 344
BseAI TCCGGA 1 cut(s) 1357
BseBI CCWGG 1 cut(s) 95
BseDI CCNNGG 2 cut(s) 524, 1368
BseGI GGATG 1 cut(s) 287
BseJI GATNNNNATC 1 cut(s) 344
BseLI CCNNNNNNNGG 4 cut(s) 505, 536, 575, 808
BseMII CTCAG 4 cut(s) 6, 48, 101, 833
BseNI ACTGG 4 cut(s) 292, 999, 1073, 1105
BseXI GCAGC 4 cut(s) 365, 1000, 1016, 1083
BseYI CCCAGC 2 cut(s) 530, 589
BshFI GGCC 6 cut(s) 5, 51, 291, 529, 908, 1367
BshNI GGYRCC 1 cut(s) 674
BsiHKAI GWGCWC 1 cut(s) 1257
BsiHKCI CYCGRG 1 cut(s) 1193
BsiSI CCGG 5 cut(s) 570, 1008, 1225, 1338, 1358
BslFI GGGAC 1 cut(s) 1203
BslI CCNNNNNNNGG 4 cut(s) 505, 536, 575, 808
BsmAI GTCTC 2 cut(s) 202, 209
BsmFI GGGAC 1 cut(s) 1203
BsnI GGCC 6 cut(s) 5, 51, 291, 529, 908, 1367
Bso31I GGTCTC 1 cut(s) 209
BsoBI CYCGRG 1 cut(s) 1193
Bsp1286I GDGCHC 1 cut(s) 1257
Bsp13I TCCGGA 1 cut(s) 1357
Bsp143I GATC 5 cut(s) 144, 334, 708, 948, 1111
Bsp19I CCATGG 1 cut(s) 524
BspACI CCGC 5 cut(s) 6, 39, 81, 114, 1328
BspANI GGCC 6 cut(s) 5, 51, 291, 529, 908, 1367
BspCNI CTCAG 4 cut(s) 7, 49, 102, 832
BspEI TCCGGA 1 cut(s) 1357
BspHI TCATGA 2 cut(s) 399, 597
BspLI GGNNCC 5 cut(s) 387, 676, 825, 1191, 1192
BspMAI CTGCAG 1 cut(s) 1006
BspPI GGATC 2 cut(s) 139, 703
BspQI GCTCTTC 2 cut(s) 71, 1300
BspT107I GGYRCC 1 cut(s) 674
BspTI CTTAAG 1 cut(s) 1265
BspTNI GGTCTC 1 cut(s) 209
BsrBI CCGCTC 2 cut(s) 81, 114
BsrFI RCCGGY 2 cut(s) 1007, 1224
BsrI ACTGG 4 cut(s) 292, 999, 1073, 1105
BssAI RCCGGY 2 cut(s) 1007, 1224
BssECI CCNNGG 2 cut(s) 524, 1368
BssMI GATC 5 cut(s) 144, 334, 708, 948, 1111
BssT1I CCWWGG 1 cut(s) 524
Bst2UI CCWGG 1 cut(s) 95
Bst4CI ACNGT 3 cut(s) 605, 1065, 1324
Bst6I CTCTTC 2 cut(s) 71, 1300
BstAFI CTTAAG 1 cut(s) 1265
BstAPI GCANNNNNTGC 1 cut(s) 1010
BstDEI CTNAG 6 cut(s) 15, 57, 110, 754, 819, 1123
BstDSI CCRYGG 2 cut(s) 524, 1368
BstF5I GGATG 1 cut(s) 287
BstKTI GATC 5 cut(s) 147, 337, 711, 951, 1114
BstMAI GTCTC 2 cut(s) 202, 209
BstMBI GATC 5 cut(s) 144, 334, 708, 948, 1111
BstMWI GCNNNNNNNGC 2 cut(s) 1010, 1013
BstNI CCWGG 1 cut(s) 95
BstNSI RCATGY 1 cut(s) 839
BstPAI GACNNNNGTC 1 cut(s) 194
BstSCI CCNGG 2 cut(s) 93, 568
BstSFI CTRYAG 1 cut(s) 1002
BstV1I GCAGC 4 cut(s) 365, 1000, 1016, 1083
BstX2I RGATCY 1 cut(s) 144
BstYI RGATCY 1 cut(s) 144
BsuI GTATCC 1 cut(s) 573
BsuRI GGCC 6 cut(s) 5, 51, 291, 529, 908, 1367
BtgI CCRYGG 2 cut(s) 524, 1368
BtsCI GGATG 1 cut(s) 287
BtsIMutI CAGTG 4 cut(s) 12, 285, 610, 1080
CaiI CAGNNNCTG 1 cut(s) 808
CciI TCATGA 2 cut(s) 399, 597
Cfr10I RCCGGY 2 cut(s) 1007, 1224
Cfr13I GGNCC 5 cut(s) 290, 528, 1190, 1365, 1394
Csp6I GTAC 2 cut(s) 448, 1052
CviAII CATG 7 cut(s) 400, 419, 525, 575, 598, 733, 836
CviQI GTAC 2 cut(s) 448, 1052
DdeI CTNAG 6 cut(s) 15, 57, 110, 754, 819, 1123
DpnI GATC 5 cut(s) 146, 336, 710, 950, 1113
DpnII GATC 5 cut(s) 144, 334, 708, 948, 1111
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 2 cut(s) 71, 1300
EarI CTCTTC 2 cut(s) 71, 1300
EciI GGCGGA 1 cut(s) 28
Ecl136II GAGCTC 1 cut(s) 1255
Eco130I CCWWGG 1 cut(s) 524
Eco24I GRGCYC 1 cut(s) 1257
Eco31I GGTCTC 1 cut(s) 209
Eco47I GGWCC 2 cut(s) 1190, 1394
Eco53kI GAGCTC 1 cut(s) 1255
Eco57I CTGAAG 1 cut(s) 719
Eco88I CYCGRG 1 cut(s) 1193
EcoICRI GAGCTC 1 cut(s) 1255
EcoO109I RGGNCCY 1 cut(s) 1190
EcoRII CCWGG 1 cut(s) 93
EcoT14I CCWWGG 1 cut(s) 524
EcoT38I GRGCYC 1 cut(s) 1257
ErhI CCWWGG 1 cut(s) 524
FaeI CATG 7 cut(s) 403, 422, 528, 578, 601, 736, 839
FalI AAGNNNNNCTT 2 cut(s) 789, 821
FaqI GGGAC 1 cut(s) 1203
FatI CATG 7 cut(s) 399, 418, 524, 574, 597, 732, 835
Fnu4HI GCNGC 6 cut(s) 6, 379, 1005, 1014, 1097, 1329
FokI GGATG 1 cut(s) 294
FriOI GRGCYC 1 cut(s) 1257
Fsp4HI GCNGC 6 cut(s) 6, 379, 1005, 1014, 1097, 1329
FspBI CTAG 2 cut(s) 1155, 1242
GluI GCNGC 6 cut(s) 6, 379, 1005, 1014, 1097, 1329
GsaI CCCAGC 2 cut(s) 534, 593
GsuI CTGGAG 1 cut(s) 830
HaeIII GGCC 6 cut(s) 5, 51, 291, 529, 908, 1367
HapII CCGG 5 cut(s) 570, 1008, 1225, 1338, 1358
Hin1II CATG 7 cut(s) 403, 422, 528, 578, 601, 736, 839
HincII GTYRAC 3 cut(s) 466, 685, 898
HindII GTYRAC 3 cut(s) 466, 685, 898
HindIII AAGCTT 3 cut(s) 251, 917, 1346
HinfI GANTC 6 cut(s) 19, 84, 151, 223, 358, 978
HpaI GTTAAC 1 cut(s) 898
HpaII CCGG 5 cut(s) 570, 1008, 1225, 1338, 1358
HphI GGTGA 4 cut(s) 128, 590, 1289, 1330
Hpy166II GTNNAC 4 cut(s) 450, 466, 685, 898
Hpy188I TCNGA 5 cut(s) 339, 664, 1090, 1111, 1409
Hpy8I GTNNAC 4 cut(s) 450, 466, 685, 898
Hpy99I CGWCG 1 cut(s) 47
HpyAV CCTTC 4 cut(s) 785, 898, 1072, 1198
HpyCH4III ACNGT 3 cut(s) 605, 1065, 1324
HpyCH4IV ACGT 1 cut(s) 103
HpyCH4V TGCA 5 cut(s) 285, 381, 732, 935, 1004
HpyF10VI GCNNNNNNNGC 2 cut(s) 1010, 1013
HpyF3I CTNAG 6 cut(s) 15, 57, 110, 754, 819, 1123
HpySE526I ACGT 1 cut(s) 103
Hsp92II CATG 7 cut(s) 403, 422, 528, 578, 601, 736, 839
KflI GGGWCCC 1 cut(s) 1190
Kpn2I TCCGGA 1 cut(s) 1357
KspAI GTTAAC 1 cut(s) 898
Kzo9I GATC 5 cut(s) 144, 334, 708, 948, 1111
LguI GCTCTTC 2 cut(s) 71, 1300
Lsp1109I GCAGC 4 cut(s) 365, 1000, 1016, 1083
LweI GCATC 2 cut(s) 272, 922
MaeI CTAG 2 cut(s) 1155, 1242
MaeII ACGT 1 cut(s) 103
MaeIII GTNAC 4 cut(s) 104, 739, 1138, 1318
MalI GATC 5 cut(s) 146, 336, 710, 950, 1113
MbiI CCGCTC 2 cut(s) 81, 114
MboI GATC 5 cut(s) 144, 334, 708, 948, 1111
MboII GAAGA 3 cut(s) 88, 980, 1287
MfeI CAATTG 2 cut(s) 855, 1179
MflI RGATCY 1 cut(s) 144
MhlI GDGCHC 1 cut(s) 1257
MluCI AATT 5 cut(s) 658, 855, 1179, 1184, 1353
MlyI GAGTC 2 cut(s) 145, 987
MmeI TCCRAC 1 cut(s) 210
MnlI CCTC 9 cut(s) 36, 112, 254, 547, 576, 605, 730, 1065, 1177
MroI TCCGGA 1 cut(s) 1357
MseI TTAA 9 cut(s) 255, 411, 480, 689, 897, 939, 1047, 1230, 1266
MslI CAYNNNNRTG 2 cut(s) 579, 840
MspCI CTTAAG 1 cut(s) 1265
MspI CCGG 5 cut(s) 570, 1008, 1225, 1338, 1358
MspR9I CCNGG 2 cut(s) 95, 570
MunI CAATTG 2 cut(s) 855, 1179
MvaI CCWGG 1 cut(s) 95
MwoI GCNNNNNNNGC 2 cut(s) 1010, 1013
NciI CCSGG 1 cut(s) 570
NcoI CCATGG 1 cut(s) 524
NdeII GATC 5 cut(s) 144, 334, 708, 948, 1111
NlaIII CATG 7 cut(s) 403, 422, 528, 578, 601, 736, 839
NlaIV GGNNCC 5 cut(s) 387, 676, 825, 1191, 1192
NmeAIII GCCGAG 1 cut(s) 238
NmuCI GTSAC 2 cut(s) 1138, 1318
NspI RCATGY 1 cut(s) 839
PagI TCATGA 2 cut(s) 399, 597
PciI ACATGT 1 cut(s) 835
PciSI GCTCTTC 2 cut(s) 71, 1300
PfeI GAWTC 4 cut(s) 19, 84, 223, 358
PflMI CCANNNNNTGG 1 cut(s) 808
PkrI GCNGC 6 cut(s) 7, 380, 1006, 1015, 1098, 1330
PleI GAGTC 2 cut(s) 145, 986
PpsI GAGTC 2 cut(s) 145, 986
PpuMI RGGWCCY 1 cut(s) 1190
PscI ACATGT 1 cut(s) 835
PshAI GACNNNNGTC 1 cut(s) 194
Psp124BI GAGCTC 1 cut(s) 1257
Psp5II RGGWCCY 1 cut(s) 1190
Psp6I CCWGG 1 cut(s) 93
PspFI CCCAGC 2 cut(s) 530, 589
PspGI CCWGG 1 cut(s) 93
PspN4I GGNNCC 5 cut(s) 387, 676, 825, 1191, 1192
PspPI GGNCC 5 cut(s) 290, 528, 1190, 1365, 1394
PspPPI RGGWCCY 1 cut(s) 1190
PstI CTGCAG 1 cut(s) 1006
PstNI CAGNNNCTG 1 cut(s) 808
PsuI RGATCY 1 cut(s) 144
RsaI GTAC 2 cut(s) 449, 1053
RsaNI GTAC 2 cut(s) 448, 1052
RseI CAYNNNNRTG 2 cut(s) 579, 840
SacI GAGCTC 1 cut(s) 1257
SapI GCTCTTC 2 cut(s) 71, 1300
SaqAI TTAA 9 cut(s) 255, 411, 480, 689, 897, 939, 1047, 1230, 1266
SatI GCNGC 6 cut(s) 6, 379, 1005, 1014, 1097, 1329
Sau3AI GATC 5 cut(s) 144, 334, 708, 948, 1111
Sau96I GGNCC 5 cut(s) 290, 528, 1190, 1365, 1394
SchI GAGTC 2 cut(s) 145, 987
ScrFI CCNGG 2 cut(s) 95, 570
SduI GDGCHC 1 cut(s) 1257
SfaNI GCATC 2 cut(s) 272, 922
SfcI CTRYAG 1 cut(s) 1002
SinI GGWCC 2 cut(s) 1190, 1394
SmiMI CAYNNNNRTG 2 cut(s) 579, 840
SmlI CTYRAG 3 cut(s) 1219, 1265, 1307
SmoI CTYRAG 3 cut(s) 1219, 1265, 1307
Sse9I AATT 5 cut(s) 658, 855, 1179, 1184, 1353
SsiI CCGC 5 cut(s) 6, 39, 81, 114, 1328
SspMI CTAG 2 cut(s) 1155, 1242
SstI GAGCTC 1 cut(s) 1257
StyD4I CCNGG 2 cut(s) 93, 568
StyI CCWWGG 1 cut(s) 524
TaaI ACNGT 3 cut(s) 605, 1065, 1324
TaiI ACGT 1 cut(s) 106
TaqI TCGA 8 cut(s) 45, 306, 615, 1144, 1169, 1251, 1257, 1374
TaqII GACCGA 1 cut(s) 560
TasI AATT 5 cut(s) 658, 855, 1179, 1184, 1353
TatI WGTACW 1 cut(s) 447
TauI GCSGC 2 cut(s) 8, 1331
TfiI GAWTC 4 cut(s) 19, 84, 223, 358
Tru1I TTAA 9 cut(s) 255, 411, 480, 689, 897, 939, 1047, 1230, 1266
Tru9I TTAA 9 cut(s) 255, 411, 480, 689, 897, 939, 1047, 1230, 1266
TscAI CASTG 4 cut(s) 19, 292, 610, 1080
TseFI GTSAC 2 cut(s) 1138, 1318
TseI GCWGC 4 cut(s) 378, 1004, 1013, 1096
Tsp45I GTSAC 2 cut(s) 1138, 1318
TspDTI ATGAA 6 cut(s) 76, 177, 416, 614, 804, 846
TspGWI ACGGA 2 cut(s) 289, 378
TspRI CASTG 4 cut(s) 19, 292, 610, 1080
Van91I CCANNNNNTGG 1 cut(s) 808
Vha464I CTTAAG 1 cut(s) 1265
VpaK11BI GGWCC 2 cut(s) 1190, 1394
XapI RAATTY 1 cut(s) 1353
XceI RCATGY 1 cut(s) 839
XcmI CCANNNNNNNNNTGG 1 cut(s) 226
XspI CTAG 2 cut(s) 1155, 1242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.