MD09G1278300.v1.1

UTP-glucose-1-phosphate uridylyltransferase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Reverse (-)
35487006 .. 35493527
6522 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1278300.v1.1.491

Sequence Viewer

Length: 1416 bp
ATGGCTGCGGTGGCTACCGGTAATGTCGACAAGCTCAAATCTGACGTCGCTTCTCTGAGCCAGATCAGCGAGAATGAGAAGAACGGATTCATCAGCCTCGTCTCTCGCTACGTCAGTGGAGAAGAAGCACAGCATGTGGAGTGGAGTAAGATCCAGACTCCTACCGACGAGGTAGTCGTTCCTTATGATGGCTTGGCACCTACTCCTGAAGATCCTGAGGAGATCAAGAAGCTTTTGGACAAACTTGTTGTGCTTAAGCTTAACGGAGGTTTGGGAACAACAATGGGTTGCACTGGCCCCAAGTCTGTCATTGAAGTTCGAAATGGGTTGACATTTCTGGACTTGATTGTCATCCAGATTGAGAATCTCAATAACAAATATGGTAGCAGTGTTCCCTTGCTTTTGATGAACTCATTCAACACTCATGACGATACTCAAAAGATTGTAGAGAAGTATTCCAAGTCAAATGTTCAGATTCATACTTTTAACCAGAGTCAGTATCCTCGTCTGGTTGTTGAAGATTTTTCGCCACTTCCATCCAAAGGACAGACTGGCAAGGACGGATGGTATCCTCCTGGCCACGGTGATGTGTTTCCATCCCTTAAGAACAGTGGAAAACTTGATCTGTTATTGTCACAGGGTAAGGAGTACGTGTTTATTGCTAACTCGGACAACTTGGGTGCTGTTGTTGACTTGAAAATTCTACAGCATTTGATCCAGAAAAAGAATGAATACTGTATGGAGGTGACACCGAAAACATTGGCCGATGTGAAGGGCGGCACTCTTATTTCTTATGAGGGCAGGGTTCAGCTCCTGGAAATTGCTCAAGTCCCTGATCAACATGTCAATGAATTCAAGTCAATAGAGAAGTTCAAAATTTTCAACACAAATAATTTGTGGGTGAACTTGAATGCAATTAAAAGGCTAGTAGAAGCTGATGCACTGAAGATGGAAATTATCCCAAACCCAAAGGAAGTGGATGGGGTCAAAGTTCTTCAACTAGAAACCGCAGCTGGTGCAGCAATCAGGTTCTTTAATAATGCTATTGGCATCAATGTACCGAGATCTCGATTCCTTCCTGTGAAGGCAACTTCCGATTTGCTTCTTGTCCAGTCTGACCTTTATACATTACAAGACGGCTTTGTTACCCGGAACAGTGCGAGAAAAAATCCAGAAAATCCTTCTATTGAATTGGGGCCTGAATTTAAGAAGGTTGGCAGTTACTTGAGTCGATTCAAGTCAATCCCCAGCATCCTTGAGCTTGATAGCCTTAAGGTTTCTGGTGATGTCTGGTTCGGTGCTGGTGTTGCTCTCAAGGGGAAAGTAACTATCACAGCAAAATCCGGGGTGAAGTTAGAAATTCCTGACAACGCCGTGATTGCAAACAAGGATATCAATGGCCCTGAAGATCTCTAA

Protein Analysis

472

Amino Acids

51.71

Weight (kDa)

5.84

Isoelectric Point (pI)

26.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGP PF01704 28 - 439 5.7e-183 UTP--glucose-1-phosphate uridylyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 173, 347
AatII GACGTC 1 cut(s) 48
AccB1I GGYRCC 1 cut(s) 196
AccI GTMKAC 1 cut(s) 27
AciI CCGC 3 cut(s) 8, 777, 1008
AclWI GGATC 3 cut(s) 145, 206, 709
AcoI YGGCCR 2 cut(s) 577, 762
AcsI RAATTY 5 cut(s) 699, 851, 876, 1202, 1359
AcuI CTGAAG 2 cut(s) 228, 965
AcyI GRCGYC 1 cut(s) 45
AfaI GTAC 2 cut(s) 650, 1059
AfiI CCNNNNNNNGG 3 cut(s) 188, 542, 581
AflII CTTAAG 3 cut(s) 254, 602, 1271
AflIII ACRYGT 2 cut(s) 651, 841
AgeI ACCGGT 1 cut(s) 17
AjnI CCWGG 2 cut(s) 574, 813
AluBI AGCT 7 cut(s) 34, 232, 259, 811, 935, 1013, 1261
AluI AGCT 7 cut(s) 34, 232, 259, 811, 935, 1013, 1261
Alw26I GTCTC 1 cut(s) 106
AlwI GGATC 3 cut(s) 145, 206, 709
AlwNI CAGNNNCTG 1 cut(s) 814
AoxI GGCC 5 cut(s) 295, 577, 762, 1196, 1399
ApeKI GCWGC 3 cut(s) 5, 1010, 1019
ApoI RAATTY 5 cut(s) 699, 851, 876, 1202, 1359
ArsI GACNNNNNNTTYG 2 cut(s) 30, 62
AsiGI ACCGGT 1 cut(s) 17
Asp700I GAANNNNTTC 2 cut(s) 86, 413
AspS9I GGNCC 3 cut(s) 296, 1196, 1400
AsuC2I CCSGG 2 cut(s) 1150, 1345
AsuHPI GGTGA 5 cut(s) 596, 757, 913, 1295, 1360
AsuII TTCGAA 1 cut(s) 319
AxyI CCTNAGG 1 cut(s) 216
BalI TGGCCA 1 cut(s) 579
BanI GGYRCC 1 cut(s) 196
BbvI GCAGC 2 cut(s) 1022, 1031
BccI CCATC 6 cut(s) 182, 544, 558, 604, 943, 974
BceAI ACGGC 2 cut(s) 1153, 1358
BciT130I CCWGG 2 cut(s) 576, 815
BciVI GTATCC 2 cut(s) 510, 579
BclI TGATCA 1 cut(s) 835
BcnI CCSGG 2 cut(s) 1150, 1345
BcoDI GTCTC 1 cut(s) 106
BfaI CTAG 2 cut(s) 926, 1001
BfmI CTRYAG 1 cut(s) 704
BfrI CTTAAG 3 cut(s) 254, 602, 1271
BfuI GTATCC 2 cut(s) 510, 579
BglII AGATCT 2 cut(s) 1064, 1408
BisI GCNGC 4 cut(s) 6, 778, 1011, 1020
BlsI GCNGC 4 cut(s) 7, 779, 1012, 1021
Bme1390I CCNGG 4 cut(s) 576, 815, 1150, 1345
BmgT120I GGNCC 3 cut(s) 296, 1196, 1400
BmiI GGNNCC 3 cut(s) 198, 298, 1197
BmrFI CCNGG 4 cut(s) 576, 815, 1150, 1345
BmsI GCATC 3 cut(s) 928, 1059, 1260
Bpu14I TTCGAA 1 cut(s) 319
BpuEI CTTGAG 4 cut(s) 810, 1246, 1277, 1298
BpuMI CCSGG 2 cut(s) 1150, 1345
BsaAI YACGTR 1 cut(s) 652
BsaBI GATNNNNATC 1 cut(s) 350
BsaHI GRCGYC 1 cut(s) 45
BsaJI CCNNGG 2 cut(s) 580, 1344
BsaWI WCCGGW 1 cut(s) 17
BsaXI ACNNNNNCTCC 2 cut(s) 638, 668
Bsc4I CCNNNNNNNGG 3 cut(s) 188, 542, 581
Bse118I RCCGGY 1 cut(s) 17
Bse1I ACTGG 3 cut(s) 298, 556, 1111
Bse21I CCTNAGG 1 cut(s) 216
Bse8I GATNNNNATC 1 cut(s) 350
BseBI CCWGG 2 cut(s) 576, 815
BseDI CCNNGG 2 cut(s) 580, 1344
BseGI GGATG 6 cut(s) 351, 536, 569, 596, 985, 1251
BseJI GATNNNNATC 1 cut(s) 350
BseLI CCNNNNNNNGG 3 cut(s) 188, 542, 581
BseMII CTCAG 2 cut(s) 47, 207
BseNI ACTGG 3 cut(s) 298, 556, 1111
BseRI GAGGAG 1 cut(s) 233
BseXI GCAGC 2 cut(s) 1022, 1031
BseYI CCCAGC 1 cut(s) 1247
BsgI GTGCAG 1 cut(s) 1038
BshFI GGCC 5 cut(s) 297, 579, 764, 1198, 1401
BshNI GGYRCC 1 cut(s) 196
BshTI ACCGGT 1 cut(s) 17
BsiSI CCGG 3 cut(s) 18, 1150, 1344
BslFI GGGAC 1 cut(s) 815
BslI CCNNNNNNNGG 3 cut(s) 188, 542, 581
BsmAI GTCTC 1 cut(s) 106
BsmBI CGTCTC 1 cut(s) 106
BsmFI GGGAC 1 cut(s) 815
BsmI GAATGC 1 cut(s) 916
BsnI GGCC 5 cut(s) 297, 579, 764, 1198, 1401
Bsp119I TTCGAA 1 cut(s) 319
Bsp143I GATC 9 cut(s) 63, 150, 211, 222, 622, 714, 835, 1064, 1408
BspACI CCGC 3 cut(s) 8, 777, 1008
BspANI GGCC 5 cut(s) 297, 579, 764, 1198, 1401
BspCNI CTCAG 2 cut(s) 48, 208
BspHI TCATGA 1 cut(s) 424
BspLI GGNNCC 3 cut(s) 198, 298, 1197
BspPI GGATC 3 cut(s) 145, 206, 709
BspT104I TTCGAA 1 cut(s) 319
BspT107I GGYRCC 1 cut(s) 196
BspTI CTTAAG 3 cut(s) 254, 602, 1271
BsrFI RCCGGY 1 cut(s) 17
BsrI ACTGG 3 cut(s) 298, 556, 1111
BssAI RCCGGY 1 cut(s) 17
BssECI CCNNGG 2 cut(s) 580, 1344
BssMI GATC 9 cut(s) 63, 150, 211, 222, 622, 714, 835, 1064, 1408
BssNI GRCGYC 1 cut(s) 45
Bst2UI CCWGG 2 cut(s) 576, 815
Bst4CI ACNGT 4 cut(s) 584, 611, 737, 1157
BstACI GRCGYC 1 cut(s) 45
BstAFI CTTAAG 3 cut(s) 254, 602, 1271
BstAPI GCANNNNNTGC 1 cut(s) 1016
BstBAI YACGTR 1 cut(s) 652
BstBI TTCGAA 1 cut(s) 319
BstDEI CTNAG 2 cut(s) 56, 216
BstDSI CCRYGG 1 cut(s) 580
BstF5I GGATG 6 cut(s) 351, 536, 569, 596, 985, 1251
BstKTI GATC 9 cut(s) 66, 153, 214, 225, 625, 717, 838, 1067, 1411
BstMAI GTCTC 1 cut(s) 106
BstMBI GATC 9 cut(s) 63, 150, 211, 222, 622, 714, 835, 1064, 1408
BstMWI GCNNNNNNNGC 6 cut(s) 11, 66, 1016, 1019, 1307, 1379
BstNI CCWGG 2 cut(s) 576, 815
BstNSI RCATGY 2 cut(s) 137, 845
BstSCI CCNGG 4 cut(s) 574, 813, 1148, 1343
BstSFI CTRYAG 1 cut(s) 704
BstV1I GCAGC 2 cut(s) 1022, 1031
BstX2I RGATCY 4 cut(s) 150, 211, 1064, 1408
BstYI RGATCY 4 cut(s) 150, 211, 1064, 1408
Bsu36I CCTNAGG 1 cut(s) 216
BsuI GTATCC 2 cut(s) 510, 579
BsuRI GGCC 5 cut(s) 297, 579, 764, 1198, 1401
BtgI CCRYGG 1 cut(s) 580
BtsCI GGATG 6 cut(s) 351, 536, 569, 596, 985, 1251
BtsI GCAGTG 1 cut(s) 394
BtsIMutI CAGTG 6 cut(s) 121, 291, 394, 616, 941, 1162
CaiI CAGNNNCTG 1 cut(s) 814
CciI TCATGA 1 cut(s) 424
Cfr10I RCCGGY 1 cut(s) 17
Cfr13I GGNCC 3 cut(s) 296, 1196, 1400
Csp6I GTAC 2 cut(s) 649, 1058
CspAI ACCGGT 1 cut(s) 17
CspCI CAANNNNNGTGG 2 cut(s) 957, 992
CviAII CATG 3 cut(s) 134, 425, 842
CviQI GTAC 2 cut(s) 649, 1058
DdeI CTNAG 2 cut(s) 56, 216
DpnI GATC 9 cut(s) 65, 152, 213, 224, 624, 716, 837, 1066, 1410
DpnII GATC 9 cut(s) 63, 150, 211, 222, 622, 714, 835, 1064, 1408
DrdI GACNNNNNNGTC 2 cut(s) 173, 347
DseDI GACNNNNNNGTC 2 cut(s) 173, 347
EaeI YGGCCR 2 cut(s) 577, 762
Eco32I GATATC 1 cut(s) 1393
Eco57I CTGAAG 2 cut(s) 228, 965
Eco81I CCTNAGG 1 cut(s) 216
EcoO109I RGGNCCY 1 cut(s) 1196
EcoRI GAATTC 1 cut(s) 851
EcoRII CCWGG 2 cut(s) 574, 813
EcoRV GATATC 1 cut(s) 1393
Esp3I CGTCTC 1 cut(s) 106
FaeI CATG 3 cut(s) 137, 428, 845
FaiI YATR 9 cut(s) 135, 186, 381, 426, 480, 740, 795, 843, 1125
FaqI GGGAC 1 cut(s) 815
FatI CATG 3 cut(s) 133, 424, 841
FbaI TGATCA 1 cut(s) 835
FblI GTMKAC 1 cut(s) 27
Fnu4HI GCNGC 4 cut(s) 6, 778, 1011, 1020
FokI GGATG 6 cut(s) 338, 523, 576, 583, 992, 1238
Fsp4HI GCNGC 4 cut(s) 6, 778, 1011, 1020
FspBI CTAG 2 cut(s) 926, 1001
GluI GCNGC 4 cut(s) 6, 778, 1011, 1020
GsaI CCCAGC 1 cut(s) 1251
HaeIII GGCC 5 cut(s) 297, 579, 764, 1198, 1401
HapII CCGG 3 cut(s) 18, 1150, 1344
Hin1I GRCGYC 1 cut(s) 45
Hin1II CATG 3 cut(s) 137, 428, 845
HincII GTYRAC 3 cut(s) 28, 330, 691
HindII GTYRAC 3 cut(s) 28, 330, 691
HindIII AAGCTT 2 cut(s) 230, 257
HinfI GANTC 8 cut(s) 87, 157, 364, 475, 493, 1071, 1228, 1233
HpaII CCGG 3 cut(s) 18, 1150, 1344
HphI GGTGA 5 cut(s) 596, 757, 913, 1295, 1360
Hpy166II GTNNAC 4 cut(s) 28, 330, 691, 904
Hpy188I TCNGA 6 cut(s) 43, 57, 474, 670, 1096, 1117
Hpy8I GTNNAC 4 cut(s) 28, 330, 691, 904
Hpy99I CGWCG 2 cut(s) 50, 170
HpyAV CCTTC 5 cut(s) 766, 1078, 1085, 1191, 1204
HpyCH4III ACNGT 4 cut(s) 584, 611, 737, 1157
HpyCH4IV ACGT 3 cut(s) 45, 111, 651
HpyCH4V TGCA 5 cut(s) 291, 914, 941, 1019, 1382
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 66, 1016, 1019, 1307, 1379
HpyF3I CTNAG 2 cut(s) 56, 216
HpySE526I ACGT 3 cut(s) 45, 111, 651
Hsp92I GRCGYC 1 cut(s) 45
Hsp92II CATG 3 cut(s) 137, 428, 845
Ksp22I TGATCA 1 cut(s) 835
Kzo9I GATC 9 cut(s) 63, 150, 211, 222, 622, 714, 835, 1064, 1408
LmnI GCTCC 1 cut(s) 816
Lsp1109I GCAGC 2 cut(s) 1022, 1031
LweI GCATC 3 cut(s) 928, 1059, 1260
MaeI CTAG 2 cut(s) 926, 1001
MaeII ACGT 3 cut(s) 45, 111, 651
MaeIII GTNAC 5 cut(s) 633, 745, 1144, 1220, 1324
MalI GATC 9 cut(s) 65, 152, 213, 224, 624, 716, 837, 1066, 1410
MboI GATC 9 cut(s) 63, 150, 211, 222, 622, 714, 835, 1064, 1408
MboII GAAGA 6 cut(s) 91, 134, 221, 530, 958, 986
MflI RGATCY 4 cut(s) 150, 211, 1064, 1408
MlsI TGGCCA 1 cut(s) 579
MluNI TGGCCA 1 cut(s) 579
MlyI GAGTC 3 cut(s) 151, 502, 1237
MnlI CCTC 8 cut(s) 107, 163, 211, 260, 513, 582, 736, 790
Mox20I TGGCCA 1 cut(s) 579
MroXI GAANNNNTTC 2 cut(s) 86, 413
MscI TGGCCA 1 cut(s) 579
MseI TTAA 8 cut(s) 255, 261, 486, 603, 918, 1035, 1206, 1272
MslI CAYNNNNRTG 2 cut(s) 585, 846
Msp20I TGGCCA 1 cut(s) 579
MspA1I CMGCKG 1 cut(s) 1013
MspCI CTTAAG 3 cut(s) 254, 602, 1271
MspI CCGG 3 cut(s) 18, 1150, 1344
MspR9I CCNGG 4 cut(s) 576, 815, 1150, 1345
Mva1269I GAATGC 1 cut(s) 916
MvaI CCWGG 2 cut(s) 576, 815
MwoI GCNNNNNNNGC 6 cut(s) 11, 66, 1016, 1019, 1307, 1379
NciI CCSGG 2 cut(s) 1150, 1345
NdeII GATC 9 cut(s) 63, 150, 211, 222, 622, 714, 835, 1064, 1408
NlaIII CATG 3 cut(s) 137, 428, 845
NlaIV GGNNCC 3 cut(s) 198, 298, 1197
NmuCI GTSAC 2 cut(s) 633, 745
NspI RCATGY 2 cut(s) 137, 845
NspV TTCGAA 1 cut(s) 319
PagI TCATGA 1 cut(s) 424
PciI ACATGT 1 cut(s) 841
PcsI WCGNNNNNNNCGW 1 cut(s) 174
PctI GAATGC 1 cut(s) 916
PdmI GAANNNNTTC 2 cut(s) 86, 413
PfeI GAWTC 5 cut(s) 87, 364, 475, 1071, 1233
PfoI TCCNGGA 1 cut(s) 813
PinAI ACCGGT 1 cut(s) 17
PkrI GCNGC 4 cut(s) 7, 779, 1012, 1021
PleI GAGTC 3 cut(s) 151, 501, 1236
PpsI GAGTC 3 cut(s) 151, 501, 1236
Ppu21I YACGTR 1 cut(s) 652
PscI ACATGT 1 cut(s) 841
Psp6I CCWGG 2 cut(s) 574, 813
PspFI CCCAGC 1 cut(s) 1247
PspGI CCWGG 2 cut(s) 574, 813
PspN4I GGNNCC 3 cut(s) 198, 298, 1197
PspPI GGNCC 3 cut(s) 296, 1196, 1400
PstNI CAGNNNCTG 1 cut(s) 814
PsuI RGATCY 4 cut(s) 150, 211, 1064, 1408
PvuII CAGCTG 1 cut(s) 1013
RsaI GTAC 2 cut(s) 650, 1059
RsaNI GTAC 2 cut(s) 649, 1058
RseI CAYNNNNRTG 2 cut(s) 585, 846
SalI GTCGAC 1 cut(s) 26
SaqAI TTAA 8 cut(s) 255, 261, 486, 603, 918, 1035, 1206, 1272
SatI GCNGC 4 cut(s) 6, 778, 1011, 1020
Sau3AI GATC 9 cut(s) 63, 150, 211, 222, 622, 714, 835, 1064, 1408
Sau96I GGNCC 3 cut(s) 296, 1196, 1400
SchI GAGTC 3 cut(s) 151, 502, 1237
ScrFI CCNGG 4 cut(s) 576, 815, 1150, 1345
SfaNI GCATC 3 cut(s) 928, 1059, 1260
SfcI CTRYAG 1 cut(s) 704
SfuI TTCGAA 1 cut(s) 319
SmiMI CAYNNNNRTG 2 cut(s) 585, 846
SmlI CTYRAG 7 cut(s) 254, 602, 825, 1225, 1256, 1271, 1313
SmoI CTYRAG 7 cut(s) 254, 602, 825, 1225, 1256, 1271, 1313
SsiI CCGC 3 cut(s) 8, 777, 1008
SspMI CTAG 2 cut(s) 926, 1001
StyD4I CCNGG 4 cut(s) 574, 813, 1148, 1343
TaaI ACNGT 4 cut(s) 584, 611, 737, 1157
TaiI ACGT 3 cut(s) 48, 114, 654
TaqI TCGA 4 cut(s) 27, 319, 1069, 1231
TauI GCSGC 1 cut(s) 780
TfiI GAWTC 5 cut(s) 87, 364, 475, 1071, 1233
Tru1I TTAA 8 cut(s) 255, 261, 486, 603, 918, 1035, 1206, 1272
Tru9I TTAA 8 cut(s) 255, 261, 486, 603, 918, 1035, 1206, 1272
TscAI CASTG 6 cut(s) 121, 298, 394, 616, 948, 1162
TseFI GTSAC 2 cut(s) 633, 745
TseI GCWGC 3 cut(s) 5, 1010, 1019
Tsp45I GTSAC 2 cut(s) 633, 745
TspDTI ATGAA 5 cut(s) 79, 422, 467, 744, 864
TspGWI ACGGA 3 cut(s) 99, 279, 576
TspRI CASTG 6 cut(s) 121, 298, 394, 616, 948, 1162
Vha464I CTTAAG 3 cut(s) 254, 602, 1271
XapI RAATTY 5 cut(s) 699, 851, 876, 1202, 1359
XceI RCATGY 2 cut(s) 137, 845
XmiI GTMKAC 1 cut(s) 27
XmnI GAANNNNTTC 2 cut(s) 86, 413
XspI CTAG 2 cut(s) 926, 1001
ZraI GACGTC 1 cut(s) 46
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.