AT5G17310

UTP--glucose-1-phosphate uridylyltransferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
5696478 .. 5700993
4516 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G17310.3

Sequence Viewer

Length: 1173 bp
ATGCGTTATGCGGTATATTCTTTCTTCAGGTTTCATTTTCTTTTCCTGTTTTTGTGCAGATCGGTTATTGAAGTTCGTGATGGTTTGACATTTCTTGACCTGATTGTTATCCAGATTGAGAATCTCAACAACAAGTATAACTGCAAGGTTCCTTTGGTTCTTATGAACTCATTCAATACACATGATGACACACAAAAGATTGTGGAAAAATACACCAAGTCAAATGTTGATATTCACACTTTTAATCAGAGCAAGTATCCTCGTGTTGTTGCTGATGAGTTTGTGCCGTGGCCAAGCAAAGGAAAGACTGACAAGGATGGATGGTATCCTCCCGGTCACGGTGATGTATTCCCATCTCTCATGAACAGTGGCAAGCTTGATGCGTTCTTATCACAGGGTAAGGAGTATGTGTTCATCGCCAACTCAGACAACTTGGGCGCAATCGTTGACTTAAAAATCTTGAAGCACCTGATCCAGAACAAAAATGAGTACTGTATGGAGGTTACACCCAAAACACTAGCTGATGTAAAGGGAGGAACTCTCATTTCTTACGAAGGAAAAGTACAGCTTTTGGAGATTGCTCAGGTTCCTGATGAACATGTAAATGAATTCAAATCAATTGAGAAATTCAAGATTTTCAACACCAACAACCTATGGGTGAACTTGAAAGCCATCAAAAAGCTTGTGGAAGCTGATGCACTTAAAATGGAGATCATCCCAAACCCGAAGGAAGTTGACGGAGTCAAAGTTCTTCAGCTGGAAACTGCAGCTGGTGCTGCGATAAGGTTTTTTGATAATGCAATTGGTGTGAATGTACCTCGGTCACGGTTCTTGCCAGTGAAGGCAACTTCAGACTTGCTTCTTGTTCAATCGGATCTGTACACACTCGTAGATGGCTTTGTCACAAGAAACAAAGCTAGAACAAACCCCACAAACCCAGCGATCGAGTTGGGACCCGAATTCAAAAAGGTAGCGAGTTTCCTTAGCCGGTTCAAGTCCATCCCGAGTATAGTTGAGCTCGATAGTCTTAAGGTCTCAGGTGATGTTTGGTTTGGCTCCGGCGTTGTTCTCAAGGGCAAAGTGACAGTAAAGGCAAACGCCGGGACTAAACTTGAAATCCCTGACAATGCCGTGCTCGAGAATAAGGACATCAACGGTCCAGAGGATCTGTGA

Protein Analysis

390

Amino Acids

43.75

Weight (kDa)

7.64

Isoelectric Point (pI)

20.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGP PF01704 16 - 353 8.8e-159 UTP--glucose-1-phosphate uridylyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 11
AclWI GGATC 2 cut(s) 466, 882
AcoI YGGCCR 1 cut(s) 290
AcsI RAATTY 3 cut(s) 608, 626, 959
AcuI CTGAAG 3 cut(s) 10, 737, 834
AfaI GTAC 4 cut(s) 491, 564, 816, 881
AfiI CCNNNNNNNGG 2 cut(s) 299, 338
AflII CTTAAG 1 cut(s) 1028
AflIII ACRYGT 1 cut(s) 598
AloI GAACNNNNNNTCC 4 cut(s) 395, 427, 732, 764
AluBI AGCT 9 cut(s) 376, 521, 568, 682, 692, 757, 770, 917, 1018
AluI AGCT 9 cut(s) 376, 521, 568, 682, 692, 757, 770, 917, 1018
Alw21I GWGCWC 2 cut(s) 1020, 1137
Alw26I GTCTC 1 cut(s) 1039
AlwI GGATC 2 cut(s) 466, 882
Ama87I CYCGRG 2 cut(s) 1003, 1136
AoxI GGCC 1 cut(s) 290
ApeKI GCWGC 2 cut(s) 767, 776
ApoI RAATTY 3 cut(s) 608, 626, 959
Asp700I GAANNNNTTC 1 cut(s) 170
AspLEI GCGC 1 cut(s) 440
AspS9I GGNCC 2 cut(s) 953, 1157
AsuC2I CCSGG 2 cut(s) 333, 1102
AsuHPI GGTGA 3 cut(s) 353, 670, 1052
AvaI CYCGRG 2 cut(s) 1003, 1136
AvaII GGWCC 2 cut(s) 953, 1157
BalI TGGCCA 1 cut(s) 292
BanII GRGCYC 1 cut(s) 1020
BarI GAAGNNNNNNTAC 2 cut(s) 546, 578
BauI CACGAG 1 cut(s) 261
Bbv12I GWGCWC 2 cut(s) 1020, 1137
BbvI GCAGC 2 cut(s) 763, 779
BccI CCATC 7 cut(s) 74, 311, 315, 361, 680, 887, 1007
BceAI ACGGC 2 cut(s) 271, 1115
BciVI GTATCC 2 cut(s) 267, 336
BcnI CCSGG 2 cut(s) 333, 1102
BcoDI GTCTC 1 cut(s) 1039
BfaI CTAG 2 cut(s) 518, 918
BfmI CTRYAG 1 cut(s) 765
BfrI CTTAAG 1 cut(s) 1028
BfuI GTATCC 2 cut(s) 267, 336
BisI GCNGC 2 cut(s) 768, 777
BlsI GCNGC 2 cut(s) 769, 778
BmcAI AGTACT 1 cut(s) 491
Bme1390I CCNGG 2 cut(s) 333, 1102
Bme18I GGWCC 2 cut(s) 953, 1157
BmeT110I CYCGRG 2 cut(s) 1003, 1136
BmgT120I GGNCC 2 cut(s) 953, 1157
BmiI GGNNCC 5 cut(s) 150, 588, 954, 955, 1057
BmrFI CCNGG 2 cut(s) 333, 1102
BmsI GCATC 2 cut(s) 370, 685
BplI GAGNNNNNCTC 2 cut(s) 525, 557
Bpu10I CCTNAGC 2 cut(s) 582, 983
BpuEI CTTGAG 1 cut(s) 1055
BpuMI CCSGG 2 cut(s) 333, 1102
BsaBI GATNNNNATC 1 cut(s) 107
BsaI GGTCTC 1 cut(s) 1039
BsaJI CCNNGG 2 cut(s) 287, 818
BsaXI ACNNNNNCTCC 4 cut(s) 395, 425, 732, 762
Bsc4I CCNNNNNNNGG 2 cut(s) 299, 338
Bse118I RCCGGY 1 cut(s) 987
Bse1I ACTGG 1 cut(s) 836
Bse8I GATNNNNATC 1 cut(s) 107
BseDI CCNNGG 2 cut(s) 287, 818
BseGI GGATG 4 cut(s) 322, 326, 714, 999
BseJI GATNNNNATC 1 cut(s) 107
BseLI CCNNNNNNNGG 2 cut(s) 299, 338
BseMII CTCAG 3 cut(s) 438, 596, 1050
BseNI ACTGG 1 cut(s) 836
BseXI GCAGC 2 cut(s) 763, 779
BseYI CCCAGC 1 cut(s) 937
BsgI GTGCAG 1 cut(s) 76
Bsh1285I CGRYCG 1 cut(s) 945
BshFI GGCC 1 cut(s) 292
BsiEI CGRYCG 1 cut(s) 945
BsiHKAI GWGCWC 2 cut(s) 1020, 1137
BsiHKCI CYCGRG 2 cut(s) 1003, 1136
BsiSI CCGG 4 cut(s) 333, 988, 1059, 1101
BslFI GGGAC 2 cut(s) 966, 1117
BslI CCNNNNNNNGG 2 cut(s) 299, 338
BsmAI GTCTC 1 cut(s) 1039
BsmFI GGGAC 2 cut(s) 966, 1117
BsnI GGCC 1 cut(s) 292
Bso31I GGTCTC 1 cut(s) 1039
BsoBI CYCGRG 2 cut(s) 1003, 1136
Bsp1286I GDGCHC 2 cut(s) 1020, 1137
Bsp1407I TGTACA 1 cut(s) 879
Bsp143I GATC 6 cut(s) 59, 471, 711, 874, 942, 1165
BspACI CCGC 1 cut(s) 11
BspANI GGCC 1 cut(s) 292
BspCNI CTCAG 3 cut(s) 437, 595, 1049
BspHI TCATGA 1 cut(s) 360
BspLI GGNNCC 5 cut(s) 150, 588, 954, 955, 1057
BspMAI CTGCAG 1 cut(s) 769
BspPI GGATC 2 cut(s) 466, 882
BspTI CTTAAG 1 cut(s) 1028
BspTNI GGTCTC 1 cut(s) 1039
BsrFI RCCGGY 1 cut(s) 987
BsrGI TGTACA 1 cut(s) 879
BsrI ACTGG 1 cut(s) 836
BssAI RCCGGY 1 cut(s) 987
BssECI CCNNGG 2 cut(s) 287, 818
BssMI GATC 6 cut(s) 59, 471, 711, 874, 942, 1165
BssSI CACGAG 1 cut(s) 261
Bst2BI CACGAG 1 cut(s) 261
Bst4CI ACNGT 6 cut(s) 341, 368, 494, 828, 1087, 1157
BstAFI CTTAAG 1 cut(s) 1028
BstAPI GCANNNNNTGC 1 cut(s) 773
BstAUI TGTACA 1 cut(s) 879
BstC8I GCNNGC 1 cut(s) 374
BstDEI CTNAG 4 cut(s) 424, 582, 983, 1036
BstDSI CCRYGG 1 cut(s) 287
BstF5I GGATG 4 cut(s) 322, 326, 714, 999
BstHHI GCGC 1 cut(s) 440
BstKTI GATC 6 cut(s) 62, 474, 714, 877, 945, 1168
BstMAI GTCTC 1 cut(s) 1039
BstMBI GATC 6 cut(s) 59, 471, 711, 874, 942, 1165
BstMCI CGRYCG 1 cut(s) 945
BstMWI GCNNNNNNNGC 2 cut(s) 773, 776
BstNSI RCATGY 1 cut(s) 602
BstSCI CCNGG 2 cut(s) 331, 1100
BstSFI CTRYAG 1 cut(s) 765
BstV1I GCAGC 2 cut(s) 763, 779
BstX2I RGATCY 2 cut(s) 874, 1165
BstYI RGATCY 2 cut(s) 874, 1165
BsuI GTATCC 2 cut(s) 267, 336
BsuRI GGCC 1 cut(s) 292
BtgI CCRYGG 1 cut(s) 287
BtgZI GCGATG 1 cut(s) 400
BtsCI GGATG 4 cut(s) 322, 326, 714, 999
BtsIMutI CAGTG 2 cut(s) 373, 843
Cac8I GCNNGC 1 cut(s) 374
CciI TCATGA 1 cut(s) 360
CfoI GCGC 1 cut(s) 440
Cfr10I RCCGGY 1 cut(s) 987
Cfr13I GGNCC 2 cut(s) 953, 1157
Csp6I GTAC 4 cut(s) 490, 563, 815, 880
CviAII CATG 3 cut(s) 182, 361, 599
CviQI GTAC 4 cut(s) 490, 563, 815, 880
DdeI CTNAG 4 cut(s) 424, 582, 983, 1036
DpnI GATC 6 cut(s) 61, 473, 713, 876, 944, 1167
DpnII GATC 6 cut(s) 59, 471, 711, 874, 942, 1165
EaeI YGGCCR 1 cut(s) 290
Ecl136II GAGCTC 1 cut(s) 1018
Eco24I GRGCYC 1 cut(s) 1020
Eco31I GGTCTC 1 cut(s) 1039
Eco47I GGWCC 2 cut(s) 953, 1157
Eco53kI GAGCTC 1 cut(s) 1018
Eco57I CTGAAG 3 cut(s) 10, 737, 834
Eco88I CYCGRG 2 cut(s) 1003, 1136
EcoICRI GAGCTC 1 cut(s) 1018
EcoO109I RGGNCCY 1 cut(s) 953
EcoRI GAATTC 2 cut(s) 608, 959
EcoT38I GRGCYC 1 cut(s) 1020
FaeI CATG 3 cut(s) 185, 364, 602
FalI AAGNNNNNCTT 2 cut(s) 552, 584
FaqI GGGAC 2 cut(s) 966, 1117
FatI CATG 3 cut(s) 181, 360, 598
Fnu4HI GCNGC 2 cut(s) 768, 777
FokI GGATG 4 cut(s) 329, 333, 701, 986
FriOI GRGCYC 1 cut(s) 1020
Fsp4HI GCNGC 2 cut(s) 768, 777
FspBI CTAG 2 cut(s) 518, 918
GlaI GCGC 1 cut(s) 439
GluI GCNGC 2 cut(s) 768, 777
GsaI CCCAGC 1 cut(s) 941
HaeIII GGCC 1 cut(s) 292
HapII CCGG 4 cut(s) 333, 988, 1059, 1101
HhaI GCGC 1 cut(s) 440
Hin1II CATG 3 cut(s) 185, 364, 602
Hin6I GCGC 1 cut(s) 438
HinP1I GCGC 1 cut(s) 438
HincII GTYRAC 2 cut(s) 448, 736
HindII GTYRAC 2 cut(s) 448, 736
HindIII AAGCTT 2 cut(s) 374, 680
HinfI GANTC 2 cut(s) 121, 741
HpaII CCGG 4 cut(s) 333, 988, 1059, 1101
HphI GGTGA 3 cut(s) 353, 670, 1052
Hpy166II GTNNAC 4 cut(s) 448, 661, 736, 882
Hpy188I TCNGA 4 cut(s) 249, 427, 853, 874
Hpy8I GTNNAC 4 cut(s) 448, 661, 736, 882
HpyAV CCTTC 3 cut(s) 548, 721, 835
HpyCH4III ACNGT 6 cut(s) 341, 368, 494, 828, 1087, 1157
HpyCH4V TGCA 5 cut(s) 57, 144, 698, 767, 800
HpyF10VI GCNNNNNNNGC 2 cut(s) 773, 776
HpyF3I CTNAG 4 cut(s) 424, 582, 983, 1036
Hsp92II CATG 3 cut(s) 185, 364, 602
HspAI GCGC 1 cut(s) 438
KflI GGGWCCC 1 cut(s) 953
Kzo9I GATC 6 cut(s) 59, 471, 711, 874, 942, 1165
LmnI GCTCC 1 cut(s) 1061
Lsp1109I GCAGC 2 cut(s) 763, 779
LweI GCATC 2 cut(s) 370, 685
MaeI CTAG 2 cut(s) 518, 918
MaeIII GTNAC 5 cut(s) 335, 502, 822, 901, 1081
MalI GATC 6 cut(s) 61, 473, 713, 876, 944, 1167
MboI GATC 6 cut(s) 59, 471, 711, 874, 942, 1165
MboII GAAGA 2 cut(s) 16, 743
MfeI CAATTG 2 cut(s) 618, 801
MflI RGATCY 2 cut(s) 874, 1165
MhlI GDGCHC 2 cut(s) 1020, 1137
MlsI TGGCCA 1 cut(s) 292
MluCI AATT 5 cut(s) 608, 618, 626, 801, 959
MluNI TGGCCA 1 cut(s) 292
MlyI GAGTC 1 cut(s) 750
MnlI CCTC 6 cut(s) 270, 339, 493, 527, 828, 1156
Mox20I TGGCCA 1 cut(s) 292
MroXI GAANNNNTTC 1 cut(s) 170
MscI TGGCCA 1 cut(s) 292
MseI TTAA 4 cut(s) 243, 452, 702, 1029
MslI CAYNNNNRTG 2 cut(s) 342, 603
Msp20I TGGCCA 1 cut(s) 292
MspA1I CMGCKG 2 cut(s) 757, 770
MspCI CTTAAG 1 cut(s) 1028
MspI CCGG 4 cut(s) 333, 988, 1059, 1101
MspR9I CCNGG 2 cut(s) 333, 1102
MunI CAATTG 2 cut(s) 618, 801
MwoI GCNNNNNNNGC 2 cut(s) 773, 776
NciI CCSGG 2 cut(s) 333, 1102
NdeII GATC 6 cut(s) 59, 471, 711, 874, 942, 1165
NlaIII CATG 3 cut(s) 185, 364, 602
NlaIV GGNNCC 5 cut(s) 150, 588, 954, 955, 1057
NmuCI GTSAC 4 cut(s) 335, 822, 901, 1081
NspI RCATGY 1 cut(s) 602
PaeR7I CTCGAG 1 cut(s) 1136
PagI TCATGA 1 cut(s) 360
PciI ACATGT 1 cut(s) 598
PdmI GAANNNNTTC 1 cut(s) 170
PfeI GAWTC 1 cut(s) 121
PflFI GACNNNGTC 1 cut(s) 740
PkrI GCNGC 2 cut(s) 769, 778
Ple19I CGATCG 1 cut(s) 945
PleI GAGTC 1 cut(s) 749
PpsI GAGTC 1 cut(s) 749
PpuMI RGGWCCY 1 cut(s) 953
PscI ACATGT 1 cut(s) 598
Psp124BI GAGCTC 1 cut(s) 1020
Psp5II RGGWCCY 1 cut(s) 953
PspFI CCCAGC 1 cut(s) 937
PspN4I GGNNCC 5 cut(s) 150, 588, 954, 955, 1057
PspPI GGNCC 2 cut(s) 953, 1157
PspPPI RGGWCCY 1 cut(s) 953
PstI CTGCAG 1 cut(s) 769
PsuI RGATCY 2 cut(s) 874, 1165
PsyI GACNNNGTC 1 cut(s) 740
PvuI CGATCG 1 cut(s) 945
PvuII CAGCTG 2 cut(s) 757, 770
RsaI GTAC 4 cut(s) 491, 564, 816, 881
RsaNI GTAC 4 cut(s) 490, 563, 815, 880
RseI CAYNNNNRTG 2 cut(s) 342, 603
SacI GAGCTC 1 cut(s) 1020
SaqAI TTAA 4 cut(s) 243, 452, 702, 1029
SatI GCNGC 2 cut(s) 768, 777
Sau3AI GATC 6 cut(s) 59, 471, 711, 874, 942, 1165
Sau96I GGNCC 2 cut(s) 953, 1157
ScaI AGTACT 1 cut(s) 491
SchI GAGTC 1 cut(s) 750
ScrFI CCNGG 2 cut(s) 333, 1102
SduI GDGCHC 2 cut(s) 1020, 1137
SfaNI GCATC 2 cut(s) 370, 685
SfcI CTRYAG 1 cut(s) 765
Sfr274I CTCGAG 1 cut(s) 1136
SinI GGWCC 2 cut(s) 953, 1157
SlaI CTCGAG 1 cut(s) 1136
SmiMI CAYNNNNRTG 2 cut(s) 342, 603
SmlI CTYRAG 3 cut(s) 1028, 1070, 1136
SmoI CTYRAG 3 cut(s) 1028, 1070, 1136
Sse9I AATT 5 cut(s) 608, 618, 626, 801, 959
SsiI CCGC 1 cut(s) 11
SspMI CTAG 2 cut(s) 518, 918
SstI GAGCTC 1 cut(s) 1020
StyD4I CCNGG 2 cut(s) 331, 1100
TaaI ACNGT 6 cut(s) 341, 368, 494, 828, 1087, 1157
TaqI TCGA 3 cut(s) 945, 1020, 1137
TaqII GACCGA 1 cut(s) 810
TasI AATT 5 cut(s) 608, 618, 626, 801, 959
TatI WGTACW 3 cut(s) 489, 562, 879
TfiI GAWTC 1 cut(s) 121
Tru1I TTAA 4 cut(s) 243, 452, 702, 1029
Tru9I TTAA 4 cut(s) 243, 452, 702, 1029
TscAI CASTG 2 cut(s) 373, 843
TseFI GTSAC 4 cut(s) 335, 822, 901, 1081
TseI GCWGC 2 cut(s) 767, 776
Tsp45I GTSAC 4 cut(s) 335, 822, 901, 1081
TspDTI ATGAA 6 cut(s) 23, 179, 377, 403, 609, 621
TspGWI ACGGA 1 cut(s) 753
TspRI CASTG 2 cut(s) 373, 843
Tth111I GACNNNGTC 1 cut(s) 740
Vha464I CTTAAG 1 cut(s) 1028
VpaK11BI GGWCC 2 cut(s) 953, 1157
XapI RAATTY 3 cut(s) 608, 626, 959
XceI RCATGY 1 cut(s) 602
XhoI CTCGAG 1 cut(s) 1136
XmnI GAANNNNTTC 1 cut(s) 170
XspI CTAG 2 cut(s) 518, 918
ZrmI AGTACT 1 cut(s) 491
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.