Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0012544

Physical Location & Seq

Genomic Coordinates Forward (+)

2181346 .. 2185126

Gene Structure 3781 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G06920.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2616 bp

ATGGTGGGATTCGCTAGAACAAAATTTTGTAAGAACTTATCATCTTTATCTGATAATGGCGAAAATCATGAGAAACCATATACATTTGAGGGTAATAGGCAAACTGTTAATGATATTTGCAATGTTTTGGAGACTGGTCCATGGGGACCTTCAGCTGAGAATACTCTATCTGCTCTAAGTTTTAAACCACAACCAGAATTTGTCATTGGGGTTTTACGGAGGCTGAAAGATGTTAATCGGGCTATTGAGTATTTCCGTTGGTATGAGAGAAGAACCGAGCTGCCTCATTGTCCTGAATCATACAACTCCTTGCTTTTGGTGATGGCTCGTTGTAGAAATTTTGATGCTTTGGACCAGATTCTTGGAGAAATGAGTGTTGCAGGATTTGGCCCTTCTGTTAACACTTGTATTGAGATGGTTTTGGGCTGCGTTAAGGCTAATAAGCTTAGGGAAGGTTATGATGTTGTGCAGATGATGAGGAAGTTCAAGTTCCGACCTGCTTTTTCAGCTTACACAACTCTTATCGGTGCTTTCTCGGCAGTTAATCATTCTGATATGATGTTGACACTCTTTCAGCAAATGCAGGAGTTAGGATATGAACCGACCGTTCATCTGTTTACAACATTGATTCGGGGATTTGCCAAAGAGGGTCGAGTTGATTCTGCTCTATCTTTACTTGATGAGATGAAGAGCAGCTCTCTTGATGCCGACATTGTTCTTTATAATGTATGTATTGATAGCTTTGGTAAAGTGGGCAAGGTTGATATGGCATGGAAATTTTTTCATGAGATTGAAGCGAATGGTTTAAAGCCTGATGAAGTCACTTATACCAGCATGATAGGAGTTCTGTGCAAGGCAAACAGATTGGATGAAGCTGTAGAGATGTTTGAGCATCTAGAGAAGAATAGACGGGTTCCTTGCACTTATGCTTACAACACGATGATTATGGGTTATGGTTCGGCTGGAAAATTTGATGAAGCATACAGTCTCCTAGAGAGACAGAGGGCTAAAGGGTCTATACCGAGTGTGATTGCATATAATTGCATTCTTACATGCTTAAGGAAAATGGGAAAAGTGGACGAAGCTTTGAAAGTTTTCGAGGAGATGAAAAAAGACGCTGCTCCAAATCTTTCAACCTATAATATTCTCATTGACATGCTGTGTAGAGCTGGTAAACTTGACACTGCTTTTGAGCTACGCGATTCTATGCAGAAGGCTGGTCTGTTTCCTAATGTGAGGACTGTGAACATAATGGTTGATCGGCTCTGTAAATCCCAAAAACTTGATGAAGCATGTGCTATGTTCGAGGAGATGGATTATAAGGTTTGTACCCCAGATGAGATTACATTTTGCTCCCTCATAGATGGCTTAGGAAAGGTCGGAAGAGTTGATGACGCTTACAAAGTCTATGAAAAGATGTTGGATTCTGATTGTCGTACTAACTCTATCGTTTACACATCCCTCATAAAAAACTTCTTCAACCACGGTAGAAAAGAAGATGGACACAAGATATACAAGGACATGATTAATCAAAACTGTTCTCCTGATTTACAGCTTCTTAATACGTACATGGATTGCATGTTCAAGGCTGGAGAACCAGAAAAGGGAAGGGCCATGTTTGAAGAAATAAAAGCCCGTCGGTTTGTCCCAGATGCTCGAAGCTACTCGATTTTAATTCATGGACTAATAAAAGCAGGATTTGCAAATGAAACTTATGAGTTGTTTTATTCCATGAAAGAGCAAGGGTGTGTCTTGGACACACGTGCTTACAATATTGTCATTGACGGTTTCTGCAAGTGTGGAAAAGTTAACAAAGCTTATCAGCTGCTGGAGGAAATGAAGACAAAAGGTTTTGAGCCAACTGTTGTTACGTATGGTTCAGTCATCGACGGGCTTGCAAAAATAGATCGGCTTGATGAAGCTTATATGCTCTTTGAGGAAGCAAAATCGAAGAGAATAGAGCTAAACGTGGTGATTTACAGTAGTCTTATTGATGGGTTTGGAAAAGTTGGTAGGATAGATGAAGCTTACCTTATCTTGGAAGAGCTTATGCAGAAAGGATTAACACCTAATCTTTACACATGGAACTCATTGCTTGATGCATTGGTCAAAGCTGAGGAAATCAACGAAGCGCTTGTCTGTTTTCAGTCGATGAAAGAACTGAAATGCACGCCAAACCAAGTTACTTATGGTATCCTAATAAATGGTCTTTGTAAGGTCAGGAAGTTCAATAAAGCCTTTGTCTTTTGGCAGGAGATGCAGAAACAGGGGATGAAACCCAGTACTATTTCTTACACCACCATGATATCAGGACTTGCAAAGGCTGGGAATATTGCAGAGGCTGGGGCGCTCTTCGATCGGTTCAAGGCAAACGGTGGTGTTCCAGACTCTGCTTGTTATAATGCCATGATCGAAGGTCTAAGTAACGGAAACAGGGCAATGGATGCTTTTTCTCTTTTTGAGGAAACACGTCGAAGAGGATTACCTATCCATAACAAAACCTGTGTTGTTCTTTTGGATACTTTGCATAAGAATGATTGTCTTGAGCAAGCAGCTATTGTGGGAGCTGTTTTGAGGGAAACGGGAAAGGCACGGCATGCTGCCCGATCTTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

871

Amino Acids

98.34

Weight (kDa)

6.52

Isoelectric Point (pI)

33.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_24	PF23276	167 - 277	1.6e-07	Fungal tetratrico peptide repeats
PPR_2	PF13041	184 - 229	8.9e-08	PPR repeat family
PPR_1	PF12854	212 - 244	1.3e-09	PPR repeat
PPR_2	PF13041	215 - 251	1.1e-06	PPR repeat family
PPR	PF01535	220 - 246	6.8e-07	PPR repeat
PPR_long	PF17177	229 - 362	1.2e-07	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	251 - 299	2.6e-15	PPR repeat family
TPR_24	PF23276	264 - 382	2.1e-06	Fungal tetratrico peptide repeats
PPR_3	PF13812	275 - 333	5.2e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	281 - 312	6e-12	PPR repeat
PPR	PF01535	288 - 316	1.2e-06	PPR repeat
PPR_3	PF13812	344 - 401	1.7e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	351 - 384	8.6e-07	PPR repeat
PPR_2	PF13041	355 - 403	1.2e-14	PPR repeat family
PPR	PF01535	359 - 385	3.2e-06	PPR repeat
PPR_long	PF17177	372 - 489	4.1e-09	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	388 - 417	1.3e-11	PPR repeat
PPR_2	PF13041	389 - 438	1.5e-15	PPR repeat family
PPR	PF01535	392 - 422	4.7e-07	PPR repeat
TPR_24	PF23276	392 - 486	6.6e-07	Fungal tetratrico peptide repeats
PPR_1	PF12854	421 - 452	2.3e-09	PPR repeat
PPR_2	PF13041	430 - 473	6.9e-10	PPR repeat family
PPR_1	PF12854	457 - 487	1.9e-09	PPR repeat
PPR	PF01535	462 - 492	7e-06	PPR repeat
PPR_2	PF13041	466 - 507	8.8e-08	PPR repeat family
PPR_long	PF17177	477 - 594	5.4e-08	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	535 - 578	3.9e-08	PPR repeat family
PPR_2	PF13041	572 - 613	6.8e-08	PPR repeat family
PPR_3	PF13812	588 - 643	7e-07	Pentatricopeptide repeat domain
TPR_24	PF23276	590 - 690	5.6e-06	Fungal tetratrico peptide repeats
PPR_1	PF12854	596 - 628	5e-13	PPR repeat
PPR_2	PF13041	600 - 648	1.9e-17	PPR repeat family
PPR	PF01535	603 - 632	1.1e-08	PPR repeat
PPR_1	PF12854	630 - 661	4.2e-08	PPR repeat
PPR_long	PF17177	649 - 742	7.1e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	658 - 718	1.6e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	666 - 696	2.7e-07	PPR repeat
PPR_2	PF13041	670 - 718	1.9e-11	PPR repeat family
PPR_3	PF13812	693 - 749	2.1e-10	Pentatricopeptide repeat domain
PPR_2	PF13041	707 - 753	4.6e-15	PPR repeat family
PPR_1	PF12854	737 - 768	1.3e-09	PPR repeat
PPR	PF01535	742 - 771	6.3e-06	PPR repeat
PPR_2	PF13041	746 - 788	4.7e-13	PPR repeat family
PPR_3	PF13812	765 - 819	4.3e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	771 - 800	6.2e-07	PPR repeat
PPR_2	PF13041	774 - 823	9.2e-10	PPR repeat family
PPR_2	PF13041	809 - 858	1.8e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0012544)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06920 AT3G06920 AT3G06920
fragaria_vesca	FvH4_4g18230 FvH4_4g18230
malus_domestica	MD08G1066700.v1.1
prunus_persica	Prupe.1G135500_v2.0.a1
pyrus_communis	pycom13g14370
rosa_chinensis	RchiOBHm_Chr4g0422371
rosa_laevigata	RLG00000007615
rosa_multiflora	Rmu_sc0013245.1_g000002
rosa_roxburghii	Rroxscaffold_5G00364490
rosa_rugosa	Rorug04G0179500
rosa_samantha	Rh4AG239000 Rh4AG239400 Rh4BG242600 Rh4CG254000 Rh4DG238100
rosa_wichuraiana	Rw4G020660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	723, 1320, 2400
Acc36I	ACCTGC	1 cut(s)	505
AccII	CGCG	1 cut(s)	1200
AcsI	RAATTY	5 cut(s)	23, 197, 337, 776, 968
AcuI	CTGAAG	1 cut(s)	135
AcvI	CACGTG	1 cut(s)	1763
AfaI	GTAC	4 cut(s)	1330, 1438, 1568, 2284
AfeI	AGCGCT	1 cut(s)	2133
AfiI	CCNNNNNNNGG	3 cut(s)	1604, 2038, 2610
AflII	CTTAAG	1 cut(s)	1057
AflIII	ACRYGT	2 cut(s)	1760, 2468
AgsI	TTSAA	9 cut(s)	487, 794, 1090, 1134, 1480, 1585, 1622, 2230, 2365
AjiI	CACGTC	1 cut(s)	2471
AjuI	GAANNNNNNNTTGG	2 cut(s)	189, 221
AloI	GAACNNNNNNTCC	2 cut(s)	1565, 1597
Alw26I	GTCTC	3 cut(s)	125, 991, 992
AlwNI	CAGNNNCTG	3 cut(s)	1828, 2342, 2390
Aor51HI	AGCGCT	1 cut(s)	2133
AoxI	GGCC	2 cut(s)	388, 1611
ApeKI	GCWGC	7 cut(s)	280, 426, 693, 1118, 1825, 2552, 2600
ApoI	RAATTY	5 cut(s)	23, 197, 337, 776, 968
ArsI	GACNNNNNNTTYG	4 cut(s)	1172, 1204, 2121, 2153
AseI	ATTAAT	1 cut(s)	1527
Asp700I	GAANNNNTTC	1 cut(s)	1094
AspLEI	GCGC	2 cut(s)	2134, 2350
AspS9I	GGNCC	5 cut(s)	137, 146, 352, 389, 1611
AsuHPI	GGTGA	2 cut(s)	331, 1984
AvaII	GGWCC	3 cut(s)	137, 146, 352
BbrPI	CACGTG	1 cut(s)	1763
BbsI	GAAGAC	1 cut(s)	1847
BbvCI	CCTCAGC	1 cut(s)	2115
BbvI	GCAGC	7 cut(s)	267, 413, 705, 1105, 1812, 2564, 2587
BccI	CCATC	6 cut(s)	316, 409, 1306, 1358, 1493, 1988
BceAI	ACGGC	1 cut(s)	2609
BcgI	CGANNNNNNTGC	2 cut(s)	1877, 1911
BciVI	GTATCC	2 cut(s)	2204, 2512
BcoDI	GTCTC	3 cut(s)	125, 991, 992
BfaI	CTAG	3 cut(s)	15, 896, 992
BfmI	CTRYAG	1 cut(s)	876
BfoI	RGCGCY	2 cut(s)	2135, 2351
BfrI	CTTAAG	1 cut(s)	1057
BfuAI	ACCTGC	1 cut(s)	505
BfuI	GTATCC	2 cut(s)	2204, 2512
BisI	GCNGC	7 cut(s)	281, 427, 694, 1119, 1826, 2553, 2601
BlsI	GCNGC	7 cut(s)	282, 428, 695, 1120, 1827, 2554, 2602
BmcAI	AGTACT	1 cut(s)	2284
Bme18I	GGWCC	3 cut(s)	137, 146, 352
BmgBI	CACGTC	1 cut(s)	2471
BmgT120I	GGNCC	5 cut(s)	137, 146, 352, 389, 1611
BmiI	GGNNCC	2 cut(s)	147, 915
BmrI	ACTGGG	1 cut(s)	2274
BmsI	GCATC	7 cut(s)	334, 694, 901, 1642, 2089, 2247, 2434
BmuI	ACTGGG	1 cut(s)	2274
BpiI	GAAGAC	1 cut(s)	1847
BplI	GAGNNNNNCTC	2 cut(s)	682, 714
BpmI	CTGGAG	2 cut(s)	1611, 1850
Bpu10I	CCTNAGC	3 cut(s)	446, 1369, 2115
BpuEI	CTTGAG	1 cut(s)	2564
BsaAI	YACGTR	3 cut(s)	1566, 1763, 1872
BsaBI	GATNNNNATC	1 cut(s)	234
BsaJI	CCNNGG	2 cut(s)	140, 1483
Bsc4I	CCNNNNNNNGG	3 cut(s)	1604, 2038, 2610
Bse1I	ACTGG	2 cut(s)	139, 2280
Bse3DI	GCAATG	3 cut(s)	127, 2090, 2445
Bse8I	GATNNNNATC	1 cut(s)	234
BseDI	CCNNGG	2 cut(s)	140, 1483
BseGI	GGATG	4 cut(s)	874, 1457, 2277, 2449
BseJI	GATNNNNATC	1 cut(s)	234
BseLI	CCNNNNNNNGG	3 cut(s)	1604, 2038, 2610
BseMI	GCAATG	3 cut(s)	127, 2090, 2445
BseMII	CTCAG	2 cut(s)	147, 2106
BseNI	ACTGG	2 cut(s)	139, 2280
BseRI	GAGGAG	2 cut(s)	1115, 1322
BseXI	GCAGC	7 cut(s)	267, 413, 705, 1105, 1812, 2564, 2587
BseYI	CCCAGC	2 cut(s)	2324, 2342
BsgI	GTGCAG	1 cut(s)	488
Bsh1236I	CGCG	1 cut(s)	1200
Bsh1285I	CGRYCG	2 cut(s)	606, 2359
BshFI	GGCC	2 cut(s)	390, 1613
BsiEI	CGRYCG	2 cut(s)	606, 2359
BslFI	GGGAC	2 cut(s)	159, 1631
BslI	CCNNNNNNNGG	3 cut(s)	1604, 2038, 2610
BsmAI	GTCTC	3 cut(s)	125, 991, 992
BsmFI	GGGAC	2 cut(s)	159, 1631
BsmI	GAATGC	1 cut(s)	1044
BsnI	GGCC	2 cut(s)	390, 1613
Bsp143I	GATC	5 cut(s)	1258, 1906, 2356, 2409, 2606
Bsp19I	CCATGG	1 cut(s)	140
BspANI	GGCC	2 cut(s)	390, 1613
BspCNI	CTCAG	2 cut(s)	148, 2107
BspFNI	CGCG	1 cut(s)	1200
BspHI	TCATGA	2 cut(s)	67, 784
BspLI	GGNNCC	2 cut(s)	147, 915
BspMI	ACCTGC	1 cut(s)	505
BspQI	GCTCTTC	3 cut(s)	683, 2037, 2357
BspTI	CTTAAG	1 cut(s)	1057
BsrDI	GCAATG	3 cut(s)	127, 2090, 2445
BsrI	ACTGG	2 cut(s)	139, 2280
BssECI	CCNNGG	2 cut(s)	140, 1483
BssMI	GATC	5 cut(s)	1258, 1906, 2356, 2409, 2606
BssT1I	CCWWGG	1 cut(s)	140
Bst6I	CTCTTC	6 cut(s)	683, 1378, 1946, 2037, 2357, 2470
BstAFI	CTTAAG	1 cut(s)	1057
BstAPI	GCANNNNNTGC	4 cut(s)	1700, 2257, 2444, 2597
BstBAI	YACGTR	3 cut(s)	1566, 1763, 1872
BstC8I	GCNNGC	4 cut(s)	1896, 2171, 2550, 2598
BstDEI	CTNAG	6 cut(s)	156, 176, 446, 1369, 2115, 2420
BstDSI	CCRYGG	2 cut(s)	140, 1483
BstF5I	GGATG	4 cut(s)	874, 1457, 2277, 2449
BstFNI	CGCG	1 cut(s)	1200
BstH2I	RGCGCY	2 cut(s)	2135, 2351
BstHHI	GCGC	2 cut(s)	2134, 2350
BstKTI	GATC	5 cut(s)	1261, 1909, 2359, 2412, 2609
BstMAI	GTCTC	3 cut(s)	125, 991, 992
BstMBI	GATC	5 cut(s)	1258, 1906, 2356, 2409, 2606
BstMCI	CGRYCG	2 cut(s)	606, 2359
BstMWI	GCNNNNNNNGC	6 cut(s)	506, 536, 1700, 2257, 2444, 2597
BstNSI	RCATGY	5 cut(s)	1056, 1159, 1296, 1582, 2600
BstSFI	CTRYAG	1 cut(s)	876
BstSNI	TACGTA	2 cut(s)	1566, 1872
BstUI	CGCG	1 cut(s)	1200
BstV1I	GCAGC	7 cut(s)	267, 413, 705, 1105, 1812, 2564, 2587
BstV2I	GAAGAC	1 cut(s)	1847
BstXI	CCANNNNNNTGG	1 cut(s)	362
BsuI	GTATCC	2 cut(s)	2204, 2512
BsuRI	GGCC	2 cut(s)	390, 1613
BtgI	CCRYGG	2 cut(s)	140, 1483
BtrI	CACGTC	1 cut(s)	2471
BtsCI	GGATG	4 cut(s)	874, 1457, 2277, 2449
BtsI	GCAGTG	1 cut(s)	1182
BtsIMutI	CAGTG	1 cut(s)	1182
BveI	ACCTGC	1 cut(s)	505
Cac8I	GCNNGC	4 cut(s)	1896, 2171, 2550, 2598
CaiI	CAGNNNCTG	3 cut(s)	1828, 2342, 2390
CciI	TCATGA	2 cut(s)	67, 784
CfoI	GCGC	2 cut(s)	2134, 2350
Cfr13I	GGNCC	5 cut(s)	137, 146, 352, 389, 1611
CseI	GACGC	2 cut(s)	1124, 1403
Csp6I	GTAC	4 cut(s)	1329, 1437, 1567, 2283
CviQI	GTAC	4 cut(s)	1329, 1437, 1567, 2283
DdeI	CTNAG	6 cut(s)	156, 176, 446, 1369, 2115, 2420
DpnI	GATC	5 cut(s)	1260, 1908, 2358, 2411, 2608
DpnII	GATC	5 cut(s)	1258, 1906, 2356, 2409, 2606
DraI	TTTAAA	2 cut(s)	184, 807
Eam1104I	CTCTTC	6 cut(s)	683, 1378, 1946, 2037, 2357, 2470
EarI	CTCTTC	6 cut(s)	683, 1378, 1946, 2037, 2357, 2470
Eco105I	TACGTA	2 cut(s)	1566, 1872
Eco130I	CCWWGG	1 cut(s)	140
Eco32I	GATATC	1 cut(s)	2307
Eco47I	GGWCC	3 cut(s)	137, 146, 352
Eco47III	AGCGCT	1 cut(s)	2133
Eco57I	CTGAAG	1 cut(s)	135
Eco72I	CACGTG	1 cut(s)	1763
EcoO109I	RGGNCCY	1 cut(s)	146
EcoRV	GATATC	1 cut(s)	2307
EcoT14I	CCWWGG	1 cut(s)	140
EcoT22I	ATGCAT	1 cut(s)	2104
ErhI	CCWWGG	1 cut(s)	140
FalI	AAGNNNNNCTT	2 cut(s)	2016, 2048
FaqI	GGGAC	2 cut(s)	159, 1631
Fnu4HI	GCNGC	7 cut(s)	281, 427, 694, 1119, 1826, 2553, 2601
FokI	GGATG	4 cut(s)	881, 1444, 2284, 2456
Fsp4HI	GCNGC	7 cut(s)	281, 427, 694, 1119, 1826, 2553, 2601
FspBI	CTAG	3 cut(s)	15, 896, 992
GlaI	GCGC	2 cut(s)	2133, 2349
GluI	GCNGC	7 cut(s)	281, 427, 694, 1119, 1826, 2553, 2601
GsaI	CCCAGC	2 cut(s)	2328, 2346
GsuI	CTGGAG	2 cut(s)	1611, 1850
HaeII	RGCGCY	2 cut(s)	2135, 2351
HaeIII	GGCC	2 cut(s)	390, 1613
HgaI	GACGC	2 cut(s)	1124, 1403
HhaI	GCGC	2 cut(s)	2134, 2350
Hin6I	GCGC	2 cut(s)	2132, 2348
HinP1I	GCGC	2 cut(s)	2132, 2348
HincII	GTYRAC	3 cut(s)	400, 564, 1810
HindII	GTYRAC	3 cut(s)	400, 564, 1810
HindIII	AAGCTT	5 cut(s)	443, 1083, 1815, 1920, 2025
HinfI	GANTC	8 cut(s)	9, 296, 358, 628, 659, 1202, 1424, 2387
HpaI	GTTAAC	2 cut(s)	400, 1810
HphI	GGTGA	2 cut(s)	331, 1984
Hpy166II	GTNNAC	8 cut(s)	400, 564, 618, 1078, 1175, 1246, 1453, 1810
Hpy188I	TCNGA	5 cut(s)	52, 494, 553, 1382, 1429
Hpy8I	GTNNAC	8 cut(s)	400, 564, 618, 1078, 1175, 1246, 1453, 1810
Hpy99I	CGWCG	3 cut(s)	1641, 1892, 2475
HpyAV	CCTTC	6 cut(s)	159, 402, 446, 1207, 1602, 2408
HpyCH4IV	ACGT	5 cut(s)	1565, 1762, 1871, 1968, 2470
HpyF10VI	GCNNNNNNNGC	6 cut(s)	506, 536, 1700, 2257, 2444, 2597
HpyF3I	CTNAG	6 cut(s)	156, 176, 446, 1369, 2115, 2420
HpySE526I	ACGT	5 cut(s)	1565, 1762, 1871, 1968, 2470
HspAI	GCGC	2 cut(s)	2132, 2348
KspAI	GTTAAC	2 cut(s)	400, 1810
Kzo9I	GATC	5 cut(s)	1258, 1906, 2356, 2409, 2606
LguI	GCTCTTC	3 cut(s)	683, 2037, 2357
LmnI	GCTCC	3 cut(s)	1126, 1358, 2564
Lsp1109I	GCAGC	7 cut(s)	267, 413, 705, 1105, 1812, 2564, 2587
LweI	GCATC	7 cut(s)	334, 694, 901, 1642, 2089, 2247, 2434
MaeI	CTAG	3 cut(s)	15, 896, 992
MaeII	ACGT	5 cut(s)	1565, 1762, 1871, 1968, 2470
MaeIII	GTNAC	4 cut(s)	820, 1867, 2182, 2423
MalI	GATC	5 cut(s)	1260, 1908, 2358, 2411, 2608
MboI	GATC	5 cut(s)	1258, 1906, 2356, 2409, 2606
MluCI	AATT	7 cut(s)	23, 197, 337, 776, 968, 1039, 1674
MlyI	GAGTC	1 cut(s)	2381
MmeI	TCCRAC	3 cut(s)	517, 1360, 1401
Mph1103I	ATGCAT	1 cut(s)	2104
MroXI	GAANNNNTTC	1 cut(s)	1094
MslI	CAYNNNNRTG	3 cut(s)	1154, 2300, 2532
MspA1I	CMGCKG	2 cut(s)	155, 1825
MspCI	CTTAAG	1 cut(s)	1057
Mva1269I	GAATGC	1 cut(s)	1044
MvnI	CGCG	1 cut(s)	1200
MwoI	GCNNNNNNNGC	6 cut(s)	506, 536, 1700, 2257, 2444, 2597
NcoI	CCATGG	1 cut(s)	140
NdeII	GATC	5 cut(s)	1258, 1906, 2356, 2409, 2606
NlaIV	GGNNCC	2 cut(s)	147, 915
NmeAIII	GCCGAG	1 cut(s)	515
NmuCI	GTSAC	1 cut(s)	820
NsiI	ATGCAT	1 cut(s)	2104
NspI	RCATGY	5 cut(s)	1056, 1159, 1296, 1582, 2600
PaeI	GCATGC	1 cut(s)	2600
PagI	TCATGA	2 cut(s)	67, 784
PciSI	GCTCTTC	3 cut(s)	683, 2037, 2357
PctI	GAATGC	1 cut(s)	1044
PdmI	GAANNNNTTC	1 cut(s)	1094
PfeI	GAWTC	7 cut(s)	9, 296, 358, 628, 659, 1202, 1424
PkrI	GCNGC	7 cut(s)	282, 428, 695, 1120, 1827, 2554, 2602
Ple19I	CGATCG	1 cut(s)	2359
PleI	GAGTC	1 cut(s)	2381
PmaCI	CACGTG	1 cut(s)	1763
PmlI	CACGTG	1 cut(s)	1763
PpsI	GAGTC	1 cut(s)	2381
Ppu21I	YACGTR	3 cut(s)	1566, 1763, 1872
PpuMI	RGGWCCY	1 cut(s)	146
PshBI	ATTAAT	1 cut(s)	1527
PsiI	TTATAA	3 cut(s)	723, 1320, 2400
Psp5II	RGGWCCY	1 cut(s)	146
PspCI	CACGTG	1 cut(s)	1763
PspFI	CCCAGC	2 cut(s)	2324, 2342
PspN4I	GGNNCC	2 cut(s)	147, 915
PspPI	GGNCC	5 cut(s)	137, 146, 352, 389, 1611
PspPPI	RGGWCCY	1 cut(s)	146
PstNI	CAGNNNCTG	3 cut(s)	1828, 2342, 2390
PvuI	CGATCG	1 cut(s)	2359
PvuII	CAGCTG	2 cut(s)	155, 1825
RsaI	GTAC	4 cut(s)	1330, 1438, 1568, 2284
RsaNI	GTAC	4 cut(s)	1329, 1437, 1567, 2283
RseI	CAYNNNNRTG	3 cut(s)	1154, 2300, 2532
SapI	GCTCTTC	3 cut(s)	683, 2037, 2357
SatI	GCNGC	7 cut(s)	281, 427, 694, 1119, 1826, 2553, 2601
Sau3AI	GATC	5 cut(s)	1258, 1906, 2356, 2409, 2606
Sau96I	GGNCC	5 cut(s)	137, 146, 352, 389, 1611
ScaI	AGTACT	1 cut(s)	2284
SchI	GAGTC	1 cut(s)	2381
SfaNI	GCATC	7 cut(s)	334, 694, 901, 1642, 2089, 2247, 2434
SfcI	CTRYAG	1 cut(s)	876
SinI	GGWCC	3 cut(s)	137, 146, 352
SmiMI	CAYNNNNRTG	3 cut(s)	1154, 2300, 2532
SmlI	CTYRAG	2 cut(s)	1057, 2543
SmoI	CTYRAG	2 cut(s)	1057, 2543
SnaBI	TACGTA	2 cut(s)	1566, 1872
SphI	GCATGC	1 cut(s)	2600
Sse9I	AATT	7 cut(s)	23, 197, 337, 776, 968, 1039, 1674
SspI	AATATT	3 cut(s)	1144, 1774, 2332
SspMI	CTAG	3 cut(s)	15, 896, 992
StyI	CCWWGG	1 cut(s)	140
TaiI	ACGT	5 cut(s)	1568, 1765, 1874, 1971, 2473
TasI	AATT	7 cut(s)	23, 197, 337, 776, 968, 1039, 1674
TatI	WGTACW	1 cut(s)	2282
TfiI	GAWTC	7 cut(s)	9, 296, 358, 628, 659, 1202, 1424
TscAI	CASTG	1 cut(s)	1189
TseFI	GTSAC	1 cut(s)	820
TseI	GCWGC	7 cut(s)	280, 426, 693, 1118, 1825, 2552, 2600
Tsp45I	GTSAC	1 cut(s)	820
TspGWI	ACGGA	3 cut(s)	232, 245, 2442
TspRI	CASTG	1 cut(s)	1189
Vha464I	CTTAAG	1 cut(s)	1057
VpaK11BI	GGWCC	3 cut(s)	137, 146, 352
VspI	ATTAAT	1 cut(s)	1527
XapI	RAATTY	5 cut(s)	23, 197, 337, 776, 968
XbaI	TCTAGA	1 cut(s)	895
XceI	RCATGY	5 cut(s)	1056, 1159, 1296, 1582, 2600
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2186
XmnI	GAANNNNTTC	1 cut(s)	1094
XspI	CTAG	3 cut(s)	15, 896, 992
ZrmI	AGTACT	1 cut(s)	2284
Zsp2I	ATGCAT	1 cut(s)	2104

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.