AT3G07320

Belongs to the glycosyl hydrolase 17 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
2332004 .. 2334185
2182 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G07320.1

Sequence Viewer

Length: 1383 bp
ATGAGTCTTCTTCTACATCTCTTTGCTCTGTCTCTGCTCATCTCTGTTTCAGGAGCAAAGTTCTCCGGCCGGCCAGGAATCAACTATGGCCAGCTCGGAAACAACCTCCCGTCACCGTCCGACTCAGTCAACCTCATCAAGTCCCTAAACGCGAAACGCGTCAAACTCTACGACGCTAACCCAAAAATCCTCGCCGCGTTAAACGGCACCGACATTACCGTCTCCGTCATGGTCCCAAACGAGCTCCTCGTCAACATCTCCAAATCCGCATCACTCTCCGACGACTGGATCCGATCCAACATCCTCCCGTTTTACCCAACCACCAAGATCCGTTACCTCCTCGTCGGCAACGAGATCCTCTCTTTACCAGACTCTGAGCTCAAATCTTCACTCGTTCCCGCAATGCGCAAGATCCAACGCTCCTTAAAGTCTCTCGGCGTTAAAAAAGTCAAAGTCGGTACTACACTCGCCACCGACGTTCTCCAATCTTCGTTTCCTCCGTCTAGCGGCGAGTTTCGGGAGGATATCTCCGGTTTAATTATGAAACCGATGCTCCAATTCTTAAACCGGACCAAATCTTTCCTATTCGTTGATGTTTACCCGTATTTCGCGTGGGCACAAGATCCGACCCATGTGGATCTCGATTACGCGATTTTCGAATCTACCAACGTCACCGTCACGGATCCGGTTTCGAATCTGACATACCACAACCTATTCGATCAGATGATTGACGCTTTCGTCTTCGCCATGAAACGAGTCGGGTATCCGGATATTCGGATCTGGGTCGCGGAAACGGGTTGGCCCAATAACGGTGACTACGACCAAATTGGAGCGAATATTTACAACGCCGCTACTTACAATCGCAATGTTGTCAAGAAACTCGCCGCTGACCCGCCCGTAGGTACGCCCGCCCGACCCGGAAAGGTTCTACCGGCGTTTGTATTCGCACTTTACAACGAAAATCAGAAAACGGGTCCGGGTACGGAGCGGCATTTCGGACTTTTACATCCGAATGGGACTCAGGTTTACGGGATTGATTTGTCGGGGAAGACGGAGTACAAGGAATCATTGCCGGCGCCGGAGAATAACGACCTGTACAAAGGGAAGATTTGGTGCGTGGTGGCTAAAGGAGCGAATTGGACTCAGCTAGGTGATGCTCTATCGTACGCTTGCTCACAGGGGAATAATACCTGTGACCCGATTCAACGCGGAGGCCCATGTCAGAAACCTGATTTGACCGTTTTGCACGCCAGTTACGCCTTTAGCTCTTATTGGGCCCAATTTCGTAAGATCGGGGGAACTTGCTCCTTCAACGGCTTAGCTACACAAACCATCAAAGATCCAAGTTACGGACGATGTGAGTTTCCGAGCGTGACATTGTGA

Protein Analysis

460

Amino Acids

50.6

Weight (kDa)

8.78

Isoelectric Point (pI)

30.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_17 PF00332 26 - 346 4.1e-98 Glycosyl hydrolases family 17
X8 PF07983 371 - 442 1.5e-17 X8 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 218, 737
Acc16I TGCGCA 1 cut(s) 407
AccB1I GGYRCC 2 cut(s) 206, 1075
AccBSI CCGCTC 1 cut(s) 988
AccII CGCG 7 cut(s) 152, 159, 197, 611, 650, 788, 1209
AccIII TCCGGA 1 cut(s) 766
AcoI YGGCCR 3 cut(s) 67, 71, 88
AcyI GRCGYC 1 cut(s) 1076
AfaI GTAC 6 cut(s) 460, 904, 982, 1058, 1097, 1166
AfiI CCNNNNNNNGG 5 cut(s) 285, 506, 809, 899, 1349
AflIII ACRYGT 1 cut(s) 157
AgsI TTSAA 2 cut(s) 1205, 1312
AjnI CCWGG 1 cut(s) 73
AjuI GAANNNNNNNTTGG 2 cut(s) 477, 509
AluBI AGCT 6 cut(s) 94, 244, 379, 1147, 1266, 1322
AluI AGCT 6 cut(s) 94, 244, 379, 1147, 1266, 1322
Alw21I GWGCWC 2 cut(s) 246, 381
Alw26I GTCTC 3 cut(s) 36, 226, 435
AlwNI CAGNNNCTG 1 cut(s) 374
Aor13HI TCCGGA 1 cut(s) 766
AoxI GGCC 6 cut(s) 67, 71, 88, 800, 1213, 1275
ApaI GGGCCC 1 cut(s) 1279
AspLEI GCGC 2 cut(s) 408, 1078
AspS9I GGNCC 7 cut(s) 232, 570, 801, 974, 1214, 1275, 1276
AsuC2I CCSGG 2 cut(s) 918, 978
AsuHPI GGTGA 4 cut(s) 105, 664, 824, 1163
AsuII TTCGAA 2 cut(s) 657, 692
AvaII GGWCC 3 cut(s) 232, 570, 974
BaeGI GKGCMC 2 cut(s) 619, 1279
BalI TGGCCA 1 cut(s) 90
BamHI GGATCC 2 cut(s) 288, 682
BanI GGYRCC 2 cut(s) 206, 1075
BanII GRGCYC 3 cut(s) 246, 381, 1279
BarI GAAGNNNNNNTAC 2 cut(s) 1040, 1072
BbsI GAAGAC 2 cut(s) 733, 1055
Bbv12I GWGCWC 2 cut(s) 246, 381
BccI CCATC 1 cut(s) 1340
BceAI ACGGC 2 cut(s) 220, 1330
BciT130I CCWGG 1 cut(s) 75
BciVI GTATCC 1 cut(s) 774
BcnI CCSGG 2 cut(s) 918, 978
BcoDI GTCTC 3 cut(s) 36, 226, 435
BfaI CTAG 2 cut(s) 504, 1148
BfoI RGCGCY 1 cut(s) 1079
BfuI GTATCC 1 cut(s) 774
BisI GCNGC 5 cut(s) 195, 508, 849, 885, 989
BlpI GCTNAGC 1 cut(s) 1318
BlsI GCNGC 5 cut(s) 196, 509, 850, 886, 990
Bme1390I CCNGG 3 cut(s) 75, 918, 978
Bme18I GGWCC 3 cut(s) 232, 570, 974
BmgT120I GGNCC 7 cut(s) 232, 570, 801, 974, 1214, 1275, 1276
BmiI GGNNCC 7 cut(s) 208, 234, 290, 684, 975, 1077, 1277
BmrFI CCNGG 3 cut(s) 75, 918, 978
BmsI GCATC 3 cut(s) 278, 540, 1144
BpiI GAAGAC 2 cut(s) 733, 1055
BplI GAGNNNNNCTC 4 cut(s) 344, 376, 512, 544
Bpu1102I GCTNAGC 1 cut(s) 1318
Bpu14I TTCGAA 2 cut(s) 657, 692
BpuMI CCSGG 2 cut(s) 918, 978
BsaHI GRCGYC 1 cut(s) 1076
BsaWI WCCGGW 4 cut(s) 530, 567, 685, 766
BsaXI ACNNNNNCTCC 2 cut(s) 537, 567
Bsc4I CCNNNNNNNGG 5 cut(s) 285, 506, 809, 899, 1349
Bse118I RCCGGY 3 cut(s) 69, 931, 1072
Bse1I ACTGG 2 cut(s) 290, 1251
Bse3DI GCAATG 3 cut(s) 408, 871, 1067
BseAI TCCGGA 1 cut(s) 766
BseBI CCWGG 1 cut(s) 75
BseGI GGATG 2 cut(s) 300, 1006
BseLI CCNNNNNNNGG 5 cut(s) 285, 506, 809, 899, 1349
BseMI GCAATG 3 cut(s) 408, 871, 1067
BseMII CTCAG 4 cut(s) 138, 366, 1034, 1157
BseNI ACTGG 2 cut(s) 290, 1251
BseRI GAGGAG 2 cut(s) 236, 329
BseSI GKGCMC 2 cut(s) 619, 1279
BseX3I CGGCCG 1 cut(s) 67
Bsh1236I CGCG 7 cut(s) 152, 159, 197, 611, 650, 788, 1209
Bsh1285I CGRYCG 1 cut(s) 70
BshFI GGCC 6 cut(s) 69, 73, 90, 802, 1215, 1277
BshNI GGYRCC 2 cut(s) 206, 1075
BsiEI CGRYCG 1 cut(s) 70
BsiHKAI GWGCWC 2 cut(s) 246, 381
BsiWI CGTACG 1 cut(s) 1164
BslFI GGGAC 3 cut(s) 127, 218, 1030
BslI CCNNNNNNNGG 5 cut(s) 285, 506, 809, 899, 1349
BsmAI GTCTC 3 cut(s) 36, 226, 435
BsmBI CGTCTC 1 cut(s) 226
BsmFI GGGAC 3 cut(s) 127, 218, 1030
BsnI GGCC 6 cut(s) 69, 73, 90, 802, 1215, 1277
Bsp119I TTCGAA 2 cut(s) 657, 692
Bsp120I GGGCCC 1 cut(s) 1275
Bsp1286I GDGCHC 4 cut(s) 246, 381, 619, 1279
Bsp13I TCCGGA 1 cut(s) 766
Bsp1407I TGTACA 1 cut(s) 1095
Bsp1720I GCTNAGC 1 cut(s) 1318
BspANI GGCC 6 cut(s) 69, 73, 90, 802, 1215, 1277
BspCNI CTCAG 4 cut(s) 137, 367, 1033, 1156
BspEI TCCGGA 1 cut(s) 766
BspFNI CGCG 7 cut(s) 152, 159, 197, 611, 650, 788, 1209
BspLI GGNNCC 7 cut(s) 208, 234, 290, 684, 975, 1077, 1277
BspT104I TTCGAA 2 cut(s) 657, 692
BspT107I GGYRCC 2 cut(s) 206, 1075
BsrBI CCGCTC 1 cut(s) 988
BsrDI GCAATG 3 cut(s) 408, 871, 1067
BsrFI RCCGGY 3 cut(s) 69, 931, 1072
BsrGI TGTACA 1 cut(s) 1095
BsrI ACTGG 2 cut(s) 290, 1251
BssAI RCCGGY 3 cut(s) 69, 931, 1072
BssNI GRCGYC 1 cut(s) 1076
Bst2UI CCWGG 1 cut(s) 75
Bst4CI ACNGT 5 cut(s) 117, 220, 676, 812, 1240
BstACI GRCGYC 1 cut(s) 1076
BstAUI TGTACA 1 cut(s) 1095
BstBI TTCGAA 2 cut(s) 657, 692
BstC8I GCNNGC 6 cut(s) 71, 92, 909, 1074, 1171, 1248
BstDEI CTNAG 5 cut(s) 124, 375, 1020, 1143, 1318
BstF5I GGATG 2 cut(s) 300, 1006
BstFNI CGCG 7 cut(s) 152, 159, 197, 611, 650, 788, 1209
BstH2I RGCGCY 1 cut(s) 1079
BstHHI GCGC 2 cut(s) 408, 1078
BstMAI GTCTC 3 cut(s) 36, 226, 435
BstMCI CGRYCG 1 cut(s) 70
BstMWI GCNNNNNNNGC 2 cut(s) 1130, 1256
BstNI CCWGG 1 cut(s) 75
BstSCI CCNGG 3 cut(s) 73, 916, 976
BstSLI GKGCMC 2 cut(s) 619, 1279
BstUI CGCG 7 cut(s) 152, 159, 197, 611, 650, 788, 1209
BstV2I GAAGAC 2 cut(s) 733, 1055
BstX2I RGATCY 9 cut(s) 288, 327, 354, 411, 622, 637, 682, 777, 1339
BstYI RGATCY 9 cut(s) 288, 327, 354, 411, 622, 637, 682, 777, 1339
BstZI CGGCCG 1 cut(s) 67
BsuI GTATCC 1 cut(s) 774
BsuRI GGCC 6 cut(s) 69, 73, 90, 802, 1215, 1277
BtsCI GGATG 2 cut(s) 300, 1006
Cac8I GCNNGC 6 cut(s) 71, 92, 909, 1074, 1171, 1248
CaiI CAGNNNCTG 1 cut(s) 374
CfoI GCGC 2 cut(s) 408, 1078
Cfr10I RCCGGY 3 cut(s) 69, 931, 1072
Cfr13I GGNCC 7 cut(s) 232, 570, 801, 974, 1214, 1275, 1276
CseI GACGC 3 cut(s) 148, 182, 740
Csp6I GTAC 6 cut(s) 459, 903, 981, 1057, 1096, 1165
CviAII CATG 4 cut(s) 229, 632, 748, 1218
CviQI GTAC 6 cut(s) 459, 903, 981, 1057, 1096, 1165
DdeI CTNAG 5 cut(s) 124, 375, 1020, 1143, 1318
DinI GGCGCC 1 cut(s) 1077
DrdI GACNNNNNNGTC 2 cut(s) 218, 737
DseDI GACNNNNNNGTC 2 cut(s) 218, 737
EaeI YGGCCR 3 cut(s) 67, 71, 88
EagI CGGCCG 1 cut(s) 67
Ecl136II GAGCTC 2 cut(s) 244, 379
EclXI CGGCCG 1 cut(s) 67
Eco24I GRGCYC 3 cut(s) 246, 381, 1279
Eco32I GATATC 1 cut(s) 526
Eco47I GGWCC 3 cut(s) 232, 570, 974
Eco52I CGGCCG 1 cut(s) 67
Eco53kI GAGCTC 2 cut(s) 244, 379
EcoICRI GAGCTC 2 cut(s) 244, 379
EcoRII CCWGG 1 cut(s) 73
EcoRV GATATC 1 cut(s) 526
EcoT38I GRGCYC 3 cut(s) 246, 381, 1279
EgeI GGCGCC 1 cut(s) 1077
EheI GGCGCC 1 cut(s) 1077
Esp3I CGTCTC 1 cut(s) 226
FaeI CATG 4 cut(s) 232, 635, 751, 1221
FaiI YATR 7 cut(s) 87, 230, 542, 633, 703, 749, 1219
FaqI GGGAC 3 cut(s) 127, 218, 1030
FatI CATG 4 cut(s) 228, 631, 747, 1217
FauI CCCGC 3 cut(s) 406, 900, 916
Fnu4HI GCNGC 5 cut(s) 195, 508, 849, 885, 989
FokI GGATG 2 cut(s) 287, 993
FriOI GRGCYC 3 cut(s) 246, 381, 1279
FseI GGCCGGCC 1 cut(s) 73
Fsp4HI GCNGC 5 cut(s) 195, 508, 849, 885, 989
FspBI CTAG 2 cut(s) 504, 1148
FspI TGCGCA 1 cut(s) 407
GlaI GCGC 2 cut(s) 407, 1077
GluI GCNGC 5 cut(s) 195, 508, 849, 885, 989
HaeII RGCGCY 1 cut(s) 1079
HaeIII GGCC 6 cut(s) 69, 73, 90, 802, 1215, 1277
HgaI GACGC 3 cut(s) 148, 182, 740
HhaI GCGC 2 cut(s) 408, 1078
Hin1I GRCGYC 1 cut(s) 1076
Hin1II CATG 4 cut(s) 232, 635, 751, 1221
Hin6I GCGC 2 cut(s) 406, 1076
HinP1I GCGC 2 cut(s) 406, 1076
HincII GTYRAC 2 cut(s) 130, 253
HindII GTYRAC 2 cut(s) 130, 253
HphI GGTGA 4 cut(s) 105, 664, 824, 1163
Hpy166II GTNNAC 4 cut(s) 130, 253, 598, 1027
Hpy188III TCNNGA 5 cut(s) 51, 518, 641, 767, 874
Hpy8I GTNNAC 4 cut(s) 130, 253, 598, 1027
Hpy99I CGWCG 4 cut(s) 176, 284, 347, 479
HpyAV CCTTC 1 cut(s) 1318
HpyCH4III ACNGT 5 cut(s) 117, 220, 676, 812, 1240
HpyCH4IV ACGT 2 cut(s) 477, 669
HpyCH4V TGCA 1 cut(s) 1246
HpyF10VI GCNNNNNNNGC 2 cut(s) 1130, 1256
HpyF3I CTNAG 5 cut(s) 124, 375, 1020, 1143, 1318
HpySE526I ACGT 2 cut(s) 477, 669
Hsp92I GRCGYC 1 cut(s) 1076
Hsp92II CATG 4 cut(s) 232, 635, 751, 1221
HspAI GCGC 2 cut(s) 406, 1076
KasI GGCGCC 1 cut(s) 1075
Kpn2I TCCGGA 1 cut(s) 766
KroI GCCGGC 2 cut(s) 69, 1072
KroNI GCCGGC 2 cut(s) 71, 1074
LmnI GCTCC 8 cut(s) 53, 249, 425, 558, 830, 985, 1130, 1310
LweI GCATC 3 cut(s) 278, 540, 1144
MaeI CTAG 2 cut(s) 504, 1148
MaeII ACGT 2 cut(s) 477, 669
MaeIII GTNAC 9 cut(s) 111, 332, 670, 676, 812, 1193, 1253, 1346, 1372
MbiI CCGCTC 1 cut(s) 988
MboII GAAGA 5 cut(s) 378, 480, 733, 1060, 1117
MflI RGATCY 9 cut(s) 288, 327, 354, 411, 622, 637, 682, 777, 1339
MhlI GDGCHC 4 cut(s) 246, 381, 619, 1279
MlsI TGGCCA 1 cut(s) 90
MluCI AATT 5 cut(s) 537, 557, 825, 1135, 1280
MluI ACGCGT 1 cut(s) 157
MluNI TGGCCA 1 cut(s) 90
Mly113I GGCGCC 1 cut(s) 1076
MlyI GAGTC 6 cut(s) 13, 116, 365, 765, 1012, 1135
MmeI TCCRAC 5 cut(s) 144, 303, 321, 439, 650
Mox20I TGGCCA 1 cut(s) 90
MroI TCCGGA 1 cut(s) 766
MroNI GCCGGC 2 cut(s) 69, 1072
MscI TGGCCA 1 cut(s) 90
MseI TTAA 5 cut(s) 200, 425, 441, 536, 563
MslI CAYNNNNRTG 1 cut(s) 1011
Msp20I TGGCCA 1 cut(s) 90
MspA1I CMGCKG 1 cut(s) 887
MspR9I CCNGG 3 cut(s) 75, 918, 978
MvaI CCWGG 1 cut(s) 75
MvnI CGCG 7 cut(s) 152, 159, 197, 611, 650, 788, 1209
MwoI GCNNNNNNNGC 2 cut(s) 1130, 1256
NaeI GCCGGC 2 cut(s) 71, 1074
NarI GGCGCC 1 cut(s) 1076
NciI CCSGG 2 cut(s) 918, 978
NgoMIV GCCGGC 2 cut(s) 69, 1072
NlaIII CATG 4 cut(s) 232, 635, 751, 1221
NlaIV GGNNCC 7 cut(s) 208, 234, 290, 684, 975, 1077, 1277
NmeAIII GCCGAG 1 cut(s) 414
NmuCI GTSAC 6 cut(s) 111, 670, 676, 812, 1193, 1372
NsbI TGCGCA 1 cut(s) 407
NspV TTCGAA 2 cut(s) 657, 692
PcsI WCGNNNNNNNCGW 7 cut(s) 156, 246, 348, 474, 497, 654, 816
PdiI GCCGGC 2 cut(s) 71, 1074
PfeI GAWTC 5 cut(s) 78, 659, 694, 1064, 1201
Pfl23II CGTACG 1 cut(s) 1164
PflFI GACNNNGTC 1 cut(s) 125
PkrI GCNGC 5 cut(s) 196, 509, 850, 886, 990
PleI GAGTC 6 cut(s) 12, 116, 365, 764, 1012, 1135
PluTI GGCGCC 1 cut(s) 1079
PpsI GAGTC 6 cut(s) 12, 116, 365, 764, 1012, 1135
Psp124BI GAGCTC 2 cut(s) 246, 381
Psp6I CCWGG 1 cut(s) 73
PspGI CCWGG 1 cut(s) 73
PspLI CGTACG 1 cut(s) 1164
PspN4I GGNNCC 7 cut(s) 208, 234, 290, 684, 975, 1077, 1277
PspOMI GGGCCC 1 cut(s) 1275
PspPI GGNCC 7 cut(s) 232, 570, 801, 974, 1214, 1275, 1276
PstNI CAGNNNCTG 1 cut(s) 374
PsuI RGATCY 9 cut(s) 288, 327, 354, 411, 622, 637, 682, 777, 1339
PsyI GACNNNGTC 1 cut(s) 125
RigI GGCCGGCC 1 cut(s) 73
RsaI GTAC 6 cut(s) 460, 904, 982, 1058, 1097, 1166
RsaNI GTAC 6 cut(s) 459, 903, 981, 1057, 1096, 1165
RseI CAYNNNNRTG 1 cut(s) 1011
SacI GAGCTC 2 cut(s) 246, 381
SaqAI TTAA 5 cut(s) 200, 425, 441, 536, 563
SatI GCNGC 5 cut(s) 195, 508, 849, 885, 989
Sau96I GGNCC 7 cut(s) 232, 570, 801, 974, 1214, 1275, 1276
SchI GAGTC 6 cut(s) 13, 116, 365, 765, 1012, 1135
ScrFI CCNGG 3 cut(s) 75, 918, 978
SduI GDGCHC 4 cut(s) 246, 381, 619, 1279
SfaNI GCATC 3 cut(s) 278, 540, 1144
SfoI GGCGCC 1 cut(s) 1077
SfuI TTCGAA 2 cut(s) 657, 692
SinI GGWCC 3 cut(s) 232, 570, 974
SmiMI CAYNNNNRTG 1 cut(s) 1011
Sse9I AATT 5 cut(s) 537, 557, 825, 1135, 1280
SspDI GGCGCC 1 cut(s) 1075
SspI AATATT 1 cut(s) 838
SspMI CTAG 2 cut(s) 504, 1148
SstI GAGCTC 2 cut(s) 246, 381
StyD4I CCNGG 3 cut(s) 73, 916, 976
TaaI ACNGT 5 cut(s) 117, 220, 676, 812, 1240
TaiI ACGT 2 cut(s) 480, 672
TaqI TCGA 4 cut(s) 642, 657, 692, 717
TasI AATT 5 cut(s) 537, 557, 825, 1135, 1280
TatI WGTACW 2 cut(s) 1056, 1095
TauI GCSGC 5 cut(s) 197, 510, 851, 887, 991
TfiI GAWTC 5 cut(s) 78, 659, 694, 1064, 1201
Tru1I TTAA 5 cut(s) 200, 425, 441, 536, 563
Tru9I TTAA 5 cut(s) 200, 425, 441, 536, 563
TseFI GTSAC 6 cut(s) 111, 670, 676, 812, 1193, 1372
Tsp45I GTSAC 6 cut(s) 111, 670, 676, 812, 1193, 1372
TspDTI ATGAA 2 cut(s) 557, 764
TspGWI ACGGA 7 cut(s) 214, 320, 489, 695, 998, 1067, 1365
Tth111I GACNNNGTC 1 cut(s) 125
VpaK11BI GGWCC 3 cut(s) 232, 570, 974
XspI CTAG 2 cut(s) 504, 1148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.