Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0009912

Physical Location & Seq

Genomic Coordinates Reverse (-)

46048373 .. 46051494

Gene Structure 3122 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG267700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1398 bp

ATGCAGCTGGGTCTTGTTCCCCTGCTCATTCTCCTTTTCTGCTTCATCATCTCGATTTCCAGCGCAGAGTTCTCGGGCAAGGTGGGTGTGAACTACGGCCAGCTGGGCAACAATCTACCATCTCCATCAGAATCTGTGAAGCTCATCCAAACCCTCAAAGCTAAGCGAGTCAAAATCTACGATGCCAACCCCAAAATCCTCAAGGCTCTCCAAAACACAGACCTCCAAGTCTCGATTATGGTGCCCAATGAGCTGATCAACAACATTTCCTCCAATCAAACCCTCGCGGATCAATGGGTCCGCGCCAATGTAGTCCCCTTCTACCCACATACCCTAATCCGGTACCTCCTCGTCGGAAACGAAATCCTCTCGGCGCCGGACAAGTCCATCTGGTTCAATCTGGTTCCGGCAATGCGCAAAATCAAGCATGCTCTCAAAACCCACGGAATCACCAAAGTCAAAGTCGGGACACCGTCGGCCATGGACGTGCTCGAGTCCTCGTTCCCGCCGTCCAACGGTACGTTCCGGTCGGATATCTCCGGCTCCGTCATCAAACCCATGTTAAAGTTTCTGTTGAAAACCAAGTCCTTCTTCTTCGTCGATGTCTATACTTACTTCCCCTGGTCTTCCGATCCGACCAACATCGATTTGGGCTACGCTCTACTCGAACCCACGAACGTGACGTACACCGACCCGGTTTCGGGTCTGACGTACCACAACCTCTTCGATCAGATGGTGGACGCTTTAATTTTCGCGATGAAGCGACTCGGGTACCCTGATATCCGGGTCTGGATCGCCGAAACGGGTTGGCCCAGCGGCGGAGACTACGACCAGATTGGCGCCAACATCCACAACGCCGCTATTTACAACCGCAATGTGATCAAAAAGTTCACGGCTAAACCGCCGGTCGGAACGCCGGCCCGACCGGGCGTGGTGCTCCCGAGCTTCATCTTCGCTCTGTACAACGAGAACACGAAGCCGGGTCCGAGTACGGAGCGGAACTTCGGGTTGCTGCACCCGAACGGGTCTAATGTGTATGAGATTGACCTGACCGGAAAGACGCCGGAGTCCGAGTTTAAGGTGTTGCCGCCGGCGACGAATAATAAGCCGTATCCGGGGCCGATATGGTGCTTGGCTAAGAAGGAAGCCAATAAGACTGCGGTTGCAGAGGCTTTGTCGTACGCTTGCTCGCAGGGGAATAAAACTTGTGACCCGATTCAACCTGGAGGGAAGTGCTTTAAGCCCAATTCGTTGGCCCAACATGCGAGCTATGCGTTCAGTGCGTATTGGGCTCAGTTTAGGAAGGCCGGTGGTAGCTGCAACTTCGGTGGTCTAGCTGTTCAAACCATCAAGGATCCAAGTTATGGATCATGCAAGTTCCCTGGTGCTAAGCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001871 GO:0003006 GO:0003674 GO:0003824 GO:0004553 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010208 GO:0010584 GO:0010927 GO:0016020 GO:0016043 GO:0016787 GO:0016798 GO:0022414 GO:0022607 GO:0030198 GO:0030246 GO:0030247 GO:0031224 GO:0031225 GO:0031226 GO:0032501 GO:0032502 GO:0032989 GO:0043062 GO:0044085 GO:0044425 GO:0044459 GO:0044464 GO:0045229 GO:0046658 GO:0048229 GO:0048316 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048869 GO:0061458 GO:0071840 GO:0071944 GO:0085029

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_17 X8

Protein Analysis

465

Amino Acids

51.03

Weight (kDa)

9.27

Isoelectric Point (pI)

33.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_17	PF00332	28 - 349	1.9e-98	Glycosyl hydrolases family 17
X8	PF07983	376 - 446	6.1e-20	X8 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009912)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07320
fragaria_vesca	FvH4_2g18182 FvH4_2g18200
malus_domestica	MD05G1166600.v1.1 MD10G1156600.v1.1
prunus_persica	Prupe.8G194400_v2.0.a1
pyrus_communis	pycom05g15540 pycom10g13480
rosa_chinensis	RchiOBHm_Chr6g0283561 RchiOBHm_Chr6g0283571
rosa_laevigata	RLG00000012816
rosa_multiflora	Rmu_sc0005719.1_g000009 Rmu_sc0007194.1_g000001
rosa_roxburghii	Rroxscaffold_7G00185370 Rroxscaffold_7G00185400
rosa_rugosa	Rorug06G0155800
rosa_samantha	Rh6AG267700 Rh6BG270200 Rh6CG270000 Rh6DG263600
rosa_wichuraiana	Rw6G023180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	227, 1066
Acc16I	TGCGCA	1 cut(s)	416
Acc65I	GGTACC	2 cut(s)	342, 771
AccB1I	GGYRCC	5 cut(s)	241, 342, 373, 771, 839
AccB7I	CCANNNNNTGG	1 cut(s)	1364
AccBSI	CCGCTC	1 cut(s)	997
AccII	CGCG	3 cut(s)	287, 303, 755
AclWI	GGATC	6 cut(s)	297, 626, 800, 1349, 1362, 1375
AcoI	YGGCCR	2 cut(s)	97, 477
AcyI	GRCGYC	3 cut(s)	374, 840, 1061
AfaI	GTAC	8 cut(s)	344, 520, 686, 713, 773, 962, 991, 1181
AfiI	CCNNNNNNNGG	8 cut(s)	339, 515, 700, 701, 818, 908, 1115, 1364
AgsI	TTSAA	4 cut(s)	397, 577, 1220, 1343
AjiI	CACGTC	1 cut(s)	487
AjnI	CCWGG	3 cut(s)	620, 1222, 1381
AjuI	GAANNNNNNNTTGG	4 cut(s)	506, 538, 575, 607
AleI	CACNNNNGTG	1 cut(s)	677
Alw21I	GWGCWC	2 cut(s)	492, 939
Alw26I	GTCTC	2 cut(s)	235, 816
AlwI	GGATC	6 cut(s)	297, 626, 800, 1349, 1362, 1375
AlwNI	CAGNNNCTG	1 cut(s)	134
Ama87I	CYCGRG	4 cut(s)	73, 491, 767, 940
AoxI	GGCC	7 cut(s)	97, 477, 809, 918, 1118, 1254, 1305
ApeKI	GCWGC	3 cut(s)	4, 1012, 1317
ArsI	GACNNNNNNTTYG	2 cut(s)	447, 479
Asp718I	GGTACC	2 cut(s)	342, 771
AspLEI	GCGC	5 cut(s)	65, 305, 376, 417, 842
AspS9I	GGNCC	6 cut(s)	298, 810, 919, 983, 1118, 1255
AsuC2I	CCSGG	5 cut(s)	695, 785, 927, 981, 1116
AsuHPI	GGTGA	1 cut(s)	442
AvaI	CYCGRG	4 cut(s)	73, 491, 767, 940
AvaII	GGWCC	2 cut(s)	298, 983
BaeGI	GKGCMC	1 cut(s)	246
BaeI	ACNNNNGTAYC	2 cut(s)	755, 788
BamHI	GGATCC	1 cut(s)	1354
BanI	GGYRCC	5 cut(s)	241, 342, 373, 771, 839
BanII	GRGCYC	1 cut(s)	1294
BbsI	GAAGAC	1 cut(s)	618
Bbv12I	GWGCWC	2 cut(s)	492, 939
BbvI	GCAGC	3 cut(s)	16, 999, 1304
BccI	CCATC	5 cut(s)	127, 133, 395, 727, 1355
BceAI	ACGGC	4 cut(s)	112, 493, 909, 1093
BcgI	CGANNNNNNTGC	4 cut(s)	54, 88, 223, 257
BciT130I	CCWGG	3 cut(s)	622, 1224, 1383
BciVI	GTATCC	1 cut(s)	1122
BclI	TGATCA	2 cut(s)	255, 879
BcnI	CCSGG	5 cut(s)	695, 785, 927, 981, 1116
BcoDI	GTCTC	2 cut(s)	235, 816
BfaI	CTAG	1 cut(s)	1334
BfoI	RGCGCY	2 cut(s)	377, 843
BfuI	GTATCC	1 cut(s)	1122
BglI	GCCNNNNNGGC	1 cut(s)	105
BisI	GCNGC	6 cut(s)	5, 817, 858, 1013, 1088, 1318
BlpI	GCTNAGC	2 cut(s)	162, 1389
BlsI	GCNGC	6 cut(s)	6, 818, 859, 1014, 1089, 1319
Bme1390I	CCNGG	8 cut(s)	622, 695, 785, 927, 981, 1116, 1224, 1383
Bme18I	GGWCC	2 cut(s)	298, 983
BmeT110I	CYCGRG	4 cut(s)	73, 491, 767, 940
BmgBI	CACGTC	1 cut(s)	487
BmgT120I	GGNCC	6 cut(s)	298, 810, 919, 983, 1118, 1255
BmrFI	CCNGG	8 cut(s)	622, 695, 785, 927, 981, 1116, 1224, 1383
BmsI	GCATC	1 cut(s)	172
BpiI	GAAGAC	1 cut(s)	618
BpmI	CTGGAG	1 cut(s)	1245
Bpu1102I	GCTNAGC	2 cut(s)	162, 1389
BpuEI	CTTGAG	1 cut(s)	185
BpuMI	CCSGG	5 cut(s)	695, 785, 927, 981, 1116
Bsa29I	ATCGAT	1 cut(s)	645
BsaHI	GRCGYC	3 cut(s)	374, 840, 1061
BsaJI	CCNNGG	5 cut(s)	442, 480, 620, 1115, 1381
BsaWI	WCCGGW	3 cut(s)	339, 525, 1052
BsaXI	ACNNNNNCTCC	4 cut(s)	254, 284, 1058, 1088
Bsc4I	CCNNNNNNNGG	8 cut(s)	339, 515, 700, 701, 818, 908, 1115, 1364
Bse118I	RCCGGY	4 cut(s)	904, 916, 1090, 1307
Bse3DI	GCAATG	2 cut(s)	417, 880
BseBI	CCWGG	3 cut(s)	622, 1224, 1383
BseCI	ATCGAT	1 cut(s)	645
BseDI	CCNNGG	5 cut(s)	442, 480, 620, 1115, 1381
BseGI	GGATG	2 cut(s)	144, 846
BseLI	CCNNNNNNNGG	8 cut(s)	339, 515, 700, 701, 818, 908, 1115, 1364
BseMI	GCAATG	2 cut(s)	417, 880
BseMII	CTCAG	1 cut(s)	1307
BseRI	GAGGAG	1 cut(s)	338
BseSI	GKGCMC	1 cut(s)	246
BseXI	GCAGC	3 cut(s)	16, 999, 1304
BseYI	CCCAGC	3 cut(s)	7, 103, 812
BsgI	GTGCAG	1 cut(s)	998
Bsh1236I	CGCG	3 cut(s)	287, 303, 755
Bsh1285I	CGRYCG	3 cut(s)	530, 909, 926
BshFI	GGCC	7 cut(s)	99, 479, 811, 920, 1120, 1256, 1307
BshNI	GGYRCC	5 cut(s)	241, 342, 373, 771, 839
BshVI	ATCGAT	1 cut(s)	645
BsiEI	CGRYCG	3 cut(s)	530, 909, 926
BsiHKAI	GWGCWC	2 cut(s)	492, 939
BsiHKCI	CYCGRG	4 cut(s)	73, 491, 767, 940
BsiWI	CGTACG	1 cut(s)	1179
BslFI	GGGAC	2 cut(s)	299, 481
BslI	CCNNNNNNNGG	8 cut(s)	339, 515, 700, 701, 818, 908, 1115, 1364
BsmAI	GTCTC	2 cut(s)	235, 816
BsmFI	GGGAC	2 cut(s)	299, 481
BsnI	GGCC	7 cut(s)	99, 479, 811, 920, 1120, 1256, 1307
BsoBI	CYCGRG	4 cut(s)	73, 491, 767, 940
Bsp1286I	GDGCHC	4 cut(s)	246, 492, 939, 1294
Bsp1407I	TGTACA	1 cut(s)	960
Bsp143I	GATC	8 cut(s)	255, 289, 631, 727, 792, 879, 1354, 1367
Bsp1720I	GCTNAGC	2 cut(s)	162, 1389
Bsp19I	CCATGG	1 cut(s)	480
Bsp68I	TCGCGA	1 cut(s)	755
BspANI	GGCC	7 cut(s)	99, 479, 811, 920, 1120, 1256, 1307
BspCNI	CTCAG	1 cut(s)	1306
BspDI	ATCGAT	1 cut(s)	645
BspFNI	CGCG	3 cut(s)	287, 303, 755
BspPI	GGATC	6 cut(s)	297, 626, 800, 1349, 1362, 1375
BspT107I	GGYRCC	5 cut(s)	241, 342, 373, 771, 839
BsrBI	CCGCTC	1 cut(s)	997
BsrDI	GCAATG	2 cut(s)	417, 880
BsrFI	RCCGGY	4 cut(s)	904, 916, 1090, 1307
BsrGI	TGTACA	1 cut(s)	960
BssAI	RCCGGY	4 cut(s)	904, 916, 1090, 1307
BssECI	CCNNGG	5 cut(s)	442, 480, 620, 1115, 1381
BssMI	GATC	8 cut(s)	255, 289, 631, 727, 792, 879, 1354, 1367
BssNI	GRCGYC	3 cut(s)	374, 840, 1061
BssT1I	CCWWGG	1 cut(s)	480
Bst2UI	CCWGG	3 cut(s)	622, 1224, 1383
Bst4CI	ACNGT	2 cut(s)	474, 518
Bst6I	CTCTTC	1 cut(s)	728
BstACI	GRCGYC	3 cut(s)	374, 840, 1061
BstAUI	TGTACA	1 cut(s)	960
BstC8I	GCNNGC	7 cut(s)	101, 429, 918, 1092, 1186, 1190, 1267
BstDEI	CTNAG	4 cut(s)	162, 1137, 1293, 1389
BstDSI	CCRYGG	2 cut(s)	442, 480
BstF5I	GGATG	2 cut(s)	144, 846
BstFNI	CGCG	3 cut(s)	287, 303, 755
BstH2I	RGCGCY	2 cut(s)	377, 843
BstHHI	GCGC	5 cut(s)	65, 305, 376, 417, 842
BstKTI	GATC	8 cut(s)	258, 292, 634, 730, 795, 882, 1357, 1370
BstMAI	GTCTC	2 cut(s)	235, 816
BstMBI	GATC	8 cut(s)	255, 289, 631, 727, 792, 879, 1354, 1367
BstMCI	CGRYCG	3 cut(s)	530, 909, 926
BstMWI	GCNNNNNNNGC	6 cut(s)	105, 250, 1262, 1271, 1280, 1289
BstNI	CCWGG	3 cut(s)	622, 1224, 1383
BstNSI	RCATGY	2 cut(s)	431, 1265
BstSCI	CCNGG	8 cut(s)	620, 693, 783, 925, 979, 1114, 1222, 1381
BstSLI	GKGCMC	1 cut(s)	246
BstUI	CGCG	3 cut(s)	287, 303, 755
BstV1I	GCAGC	3 cut(s)	16, 999, 1304
BstV2I	GAAGAC	1 cut(s)	618
BstX2I	RGATCY	1 cut(s)	1354
BstXI	CCANNNNNNTGG	1 cut(s)	1252
BstYI	RGATCY	1 cut(s)	1354
Bsu15I	ATCGAT	1 cut(s)	645
BsuI	GTATCC	1 cut(s)	1122
BsuRI	GGCC	7 cut(s)	99, 479, 811, 920, 1120, 1256, 1307
BsuTUI	ATCGAT	1 cut(s)	645
BtgI	CCRYGG	2 cut(s)	442, 480
BtgZI	GCGATG	1 cut(s)	770
BtrI	CACGTC	1 cut(s)	487
BtsCI	GGATG	2 cut(s)	144, 846
BtsIMutI	CAGTG	1 cut(s)	1285
BtuMI	TCGCGA	1 cut(s)	755
Cac8I	GCNNGC	7 cut(s)	101, 429, 918, 1092, 1186, 1190, 1267
CaiI	CAGNNNCTG	1 cut(s)	134
CfoI	GCGC	5 cut(s)	65, 305, 376, 417, 842
Cfr10I	RCCGGY	4 cut(s)	904, 916, 1090, 1307
Cfr13I	GGNCC	6 cut(s)	298, 810, 919, 983, 1118, 1255
ClaI	ATCGAT	1 cut(s)	645
CseI	GACGC	2 cut(s)	749, 1069
Csp6I	GTAC	8 cut(s)	343, 519, 685, 712, 772, 961, 990, 1180
CspCI	CAANNNNNGTGG	2 cut(s)	1309, 1344
CviAII	CATG	5 cut(s)	428, 481, 559, 1262, 1371
CviQI	GTAC	8 cut(s)	343, 519, 685, 712, 772, 961, 990, 1180
DdeI	CTNAG	4 cut(s)	162, 1137, 1293, 1389
DinI	GGCGCC	2 cut(s)	375, 841
DpnI	GATC	8 cut(s)	257, 291, 633, 729, 794, 881, 1356, 1369
DpnII	GATC	8 cut(s)	255, 289, 631, 727, 792, 879, 1354, 1367
DrdI	GACNNNNNNGTC	2 cut(s)	227, 1066
DseDI	GACNNNNNNGTC	2 cut(s)	227, 1066
EaeI	YGGCCR	2 cut(s)	97, 477
Eam1104I	CTCTTC	1 cut(s)	728
EarI	CTCTTC	1 cut(s)	728
EciI	GGCGGA	1 cut(s)	834
Eco130I	CCWWGG	1 cut(s)	480
Eco24I	GRGCYC	1 cut(s)	1294
Eco32I	GATATC	2 cut(s)	535, 781
Eco47I	GGWCC	2 cut(s)	298, 983
Eco88I	CYCGRG	4 cut(s)	73, 491, 767, 940
EcoRII	CCWGG	3 cut(s)	620, 1222, 1381
EcoRV	GATATC	2 cut(s)	535, 781
EcoT14I	CCWWGG	1 cut(s)	480
EcoT38I	GRGCYC	1 cut(s)	1294
EgeI	GGCGCC	2 cut(s)	375, 841
EheI	GGCGCC	2 cut(s)	375, 841
ErhI	CCWWGG	1 cut(s)	480
FaeI	CATG	5 cut(s)	431, 484, 562, 1265, 1374
FalI	AAGNNNNNCTT	2 cut(s)	575, 607
FaqI	GGGAC	2 cut(s)	299, 481
FatI	CATG	5 cut(s)	427, 480, 558, 1261, 1370
FauI	CCCGC	1 cut(s)	513
FbaI	TGATCA	2 cut(s)	255, 879
Fnu4HI	GCNGC	6 cut(s)	5, 817, 858, 1013, 1088, 1318
FokI	GGATG	2 cut(s)	131, 833
FriOI	GRGCYC	1 cut(s)	1294
Fsp4HI	GCNGC	6 cut(s)	5, 817, 858, 1013, 1088, 1318
FspBI	CTAG	1 cut(s)	1334
FspI	TGCGCA	1 cut(s)	416
GlaI	GCGC	5 cut(s)	64, 304, 375, 416, 841
GluI	GCNGC	6 cut(s)	5, 817, 858, 1013, 1088, 1318
GsaI	CCCAGC	3 cut(s)	11, 107, 816
GsuI	CTGGAG	1 cut(s)	1245
HaeII	RGCGCY	2 cut(s)	377, 843
HaeIII	GGCC	7 cut(s)	99, 479, 811, 920, 1120, 1256, 1307
HgaI	GACGC	2 cut(s)	749, 1069
HhaI	GCGC	5 cut(s)	65, 305, 376, 417, 842
Hin1I	GRCGYC	3 cut(s)	374, 840, 1061
Hin1II	CATG	5 cut(s)	431, 484, 562, 1265, 1374
Hin6I	GCGC	5 cut(s)	63, 303, 374, 415, 840
HinP1I	GCGC	5 cut(s)	63, 303, 374, 415, 840
HinfI	GANTC	7 cut(s)	131, 168, 447, 494, 765, 1067, 1216
HphI	GGTGA	1 cut(s)	442
Hpy166II	GTNNAC	4 cut(s)	91, 687, 739, 891
Hpy188III	TCNNGA	6 cut(s)	52, 232, 466, 754, 790, 940
Hpy8I	GTNNAC	4 cut(s)	91, 687, 739, 891
Hpy99I	CGWCG	4 cut(s)	356, 478, 602, 1099
HpyAV	CCTTC	4 cut(s)	328, 598, 1135, 1297
HpyCH4III	ACNGT	2 cut(s)	474, 518
HpyCH4IV	ACGT	5 cut(s)	486, 521, 678, 683, 710
HpyCH4V	TGCA	5 cut(s)	4, 1015, 1166, 1320, 1374
HpyF10VI	GCNNNNNNNGC	6 cut(s)	105, 250, 1262, 1271, 1280, 1289
HpyF3I	CTNAG	4 cut(s)	162, 1137, 1293, 1389
HpySE526I	ACGT	5 cut(s)	486, 521, 678, 683, 710
Hsp92I	GRCGYC	3 cut(s)	374, 840, 1061
Hsp92II	CATG	5 cut(s)	431, 484, 562, 1265, 1374
HspAI	GCGC	5 cut(s)	63, 303, 374, 415, 840
KasI	GGCGCC	2 cut(s)	373, 839
KpnI	GGTACC	2 cut(s)	346, 775
KroI	GCCGGC	2 cut(s)	916, 1090
KroNI	GCCGGC	2 cut(s)	918, 1092
Ksp22I	TGATCA	2 cut(s)	255, 879
Kzo9I	GATC	8 cut(s)	255, 289, 631, 727, 792, 879, 1354, 1367
LmnI	GCTCC	3 cut(s)	548, 942, 994
Lsp1109I	GCAGC	3 cut(s)	16, 999, 1304
LweI	GCATC	1 cut(s)	172
MaeI	CTAG	1 cut(s)	1334
MaeII	ACGT	5 cut(s)	486, 521, 678, 683, 710
MaeIII	GTNAC	2 cut(s)	679, 1208
MalI	GATC	8 cut(s)	257, 291, 633, 729, 794, 881, 1356, 1369
MbiI	CCGCTC	1 cut(s)	997
MboI	GATC	8 cut(s)	255, 289, 631, 727, 792, 879, 1354, 1367
MboII	GAAGA	5 cut(s)	583, 586, 618, 715, 943
MflI	RGATCY	1 cut(s)	1354
MhlI	GDGCHC	4 cut(s)	246, 492, 939, 1294
MluCI	AATT	2 cut(s)	747, 1246
Mly113I	GGCGCC	2 cut(s)	374, 840
MlyI	GAGTC	4 cut(s)	177, 503, 759, 1076
MmeI	TCCRAC	5 cut(s)	334, 510, 537, 659, 889
MreI	CGCCGGCG	1 cut(s)	1090
MroNI	GCCGGC	2 cut(s)	916, 1090
MseI	TTAA	4 cut(s)	563, 746, 1077, 1239
MslI	CAYNNNNRTG	2 cut(s)	485, 677
MspA1I	CMGCKG	3 cut(s)	7, 103, 816
MspR9I	CCNGG	8 cut(s)	622, 695, 785, 927, 981, 1116, 1224, 1383
MvaI	CCWGG	3 cut(s)	622, 1224, 1383
MvnI	CGCG	3 cut(s)	287, 303, 755
MwoI	GCNNNNNNNGC	6 cut(s)	105, 250, 1262, 1271, 1280, 1289
NaeI	GCCGGC	2 cut(s)	918, 1092
NarI	GGCGCC	2 cut(s)	374, 840
NciI	CCSGG	5 cut(s)	695, 785, 927, 981, 1116
NcoI	CCATGG	1 cut(s)	480
NdeII	GATC	8 cut(s)	255, 289, 631, 727, 792, 879, 1354, 1367
NgoMIV	GCCGGC	2 cut(s)	916, 1090
NlaIII	CATG	5 cut(s)	431, 484, 562, 1265, 1374
NmeAIII	GCCGAG	1 cut(s)	350
NmuCI	GTSAC	2 cut(s)	679, 1208
NruI	TCGCGA	1 cut(s)	755
NsbI	TGCGCA	1 cut(s)	416
NspI	RCATGY	2 cut(s)	431, 1265
OliI	CACNNNNGTG	1 cut(s)	677
PaeI	GCATGC	1 cut(s)	431
PaeR7I	CTCGAG	1 cut(s)	491
PcsI	WCGNNNNNNNCGW	5 cut(s)	357, 506, 663, 680, 707
PdiI	GCCGGC	2 cut(s)	918, 1092
PfeI	GAWTC	3 cut(s)	131, 447, 1216
Pfl23II	CGTACG	1 cut(s)	1179
PflFI	GACNNNGTC	1 cut(s)	472
PflMI	CCANNNNNTGG	1 cut(s)	1364
PkrI	GCNGC	6 cut(s)	6, 818, 859, 1014, 1089, 1319
PleI	GAGTC	4 cut(s)	176, 502, 759, 1075
PluTI	GGCGCC	2 cut(s)	377, 843
PpsI	GAGTC	4 cut(s)	176, 502, 759, 1075
Psp6I	CCWGG	3 cut(s)	620, 1222, 1381
PspFI	CCCAGC	3 cut(s)	7, 103, 812
PspGI	CCWGG	3 cut(s)	620, 1222, 1381
PspLI	CGTACG	1 cut(s)	1179
PspPI	GGNCC	6 cut(s)	298, 810, 919, 983, 1118, 1255
PspXI	VCTCGAGB	1 cut(s)	491
PsrI	GAACNNNNNNTAC	2 cut(s)	668, 700
PstNI	CAGNNNCTG	1 cut(s)	134
PsuI	RGATCY	1 cut(s)	1354
PsyI	GACNNNGTC	1 cut(s)	472
PvuII	CAGCTG	2 cut(s)	7, 103
RruI	TCGCGA	1 cut(s)	755
RsaI	GTAC	8 cut(s)	344, 520, 686, 713, 773, 962, 991, 1181
RsaNI	GTAC	8 cut(s)	343, 519, 685, 712, 772, 961, 990, 1180
RseI	CAYNNNNRTG	2 cut(s)	485, 677
SaqAI	TTAA	4 cut(s)	563, 746, 1077, 1239
SatI	GCNGC	6 cut(s)	5, 817, 858, 1013, 1088, 1318
Sau3AI	GATC	8 cut(s)	255, 289, 631, 727, 792, 879, 1354, 1367
Sau96I	GGNCC	6 cut(s)	298, 810, 919, 983, 1118, 1255
SchI	GAGTC	4 cut(s)	177, 503, 759, 1076
ScrFI	CCNGG	8 cut(s)	622, 695, 785, 927, 981, 1116, 1224, 1383
SduI	GDGCHC	4 cut(s)	246, 492, 939, 1294
SfaNI	GCATC	1 cut(s)	172
SfoI	GGCGCC	2 cut(s)	375, 841
Sfr274I	CTCGAG	1 cut(s)	491
SgrAI	CRCCGGYG	1 cut(s)	1090
SinI	GGWCC	2 cut(s)	298, 983
SlaI	CTCGAG	1 cut(s)	491
SmiMI	CAYNNNNRTG	2 cut(s)	485, 677
SmlI	CTYRAG	2 cut(s)	200, 491
SmoI	CTYRAG	2 cut(s)	200, 491
SphI	GCATGC	1 cut(s)	431
Sse9I	AATT	2 cut(s)	747, 1246
SspDI	GGCGCC	2 cut(s)	373, 839
SspMI	CTAG	1 cut(s)	1334
StyD4I	CCNGG	8 cut(s)	620, 693, 783, 925, 979, 1114, 1222, 1381
StyI	CCWWGG	1 cut(s)	480
TaaI	ACNGT	2 cut(s)	474, 518
TaiI	ACGT	5 cut(s)	489, 524, 681, 686, 713
TaqI	TCGA	7 cut(s)	53, 233, 492, 600, 645, 666, 726
TasI	AATT	2 cut(s)	747, 1246
TatI	WGTACW	1 cut(s)	960
TauI	GCSGC	3 cut(s)	819, 860, 1090
TfiI	GAWTC	3 cut(s)	131, 447, 1216
Tru1I	TTAA	4 cut(s)	563, 746, 1077, 1239
Tru9I	TTAA	4 cut(s)	563, 746, 1077, 1239
TscAI	CASTG	1 cut(s)	1285
TseFI	GTSAC	2 cut(s)	679, 1208
TseI	GCWGC	3 cut(s)	4, 1012, 1317
Tsp45I	GTSAC	2 cut(s)	679, 1208
TspDTI	ATGAA	3 cut(s)	34, 773, 937
TspGWI	ACGGA	3 cut(s)	459, 535, 1007
TspRI	CASTG	1 cut(s)	1285
Tth111I	GACNNNGTC	1 cut(s)	472
Van91I	CCANNNNNTGG	1 cut(s)	1364
VpaK11BI	GGWCC	2 cut(s)	298, 983
XceI	RCATGY	2 cut(s)	431, 1265
XcmI	CCANNNNNNNNNTGG	1 cut(s)	646
XhoI	CTCGAG	1 cut(s)	491
XspI	CTAG	1 cut(s)	1334

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.