Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0009912

Physical Location & Seq

Genomic Coordinates Forward (+)

24799104 .. 24800635

Gene Structure 1532 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00185400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1335 bp

ATGCAGCTGGGTCATGTTTCCCTGCTCCTTCTCATTCTCTGCTTCTTCATCTCCATTTCCAGCGCAGAGTTCTCGGCCAAGGTTGGTGTGAACTACGGCCAGCTGGGCAACAATCTACCATCTCCGTCAGAGTCTGTGAAGCTCATCCAAACCCTCAAAGCCATGCGGGTCAAAATCTACGGTGCCAACCATGACATCCTCGAGGCTCTCCGAAACACAGACCTCCAAGTCTCCATTATGGTACCCAATGAGCTCATCAACAACATTTCCTCCAGTCAAACCCTCGCCGACCAATGGGTACACGACAATGTAGTCCCCTTCTACCCACAGACCCTAATCCGATACCTCCTCGTCGGAAACGAAATCCTCTCGTGGTCGGACAAGTCTATGTGGTTCAATCTGGTTCCGGCAATGCGCAAAATCATGCATGCTCTCAAAATCCACGGAATCACCAAAGTCAAAGTCGGGACTCCATCGGCCATAGACGTGCTCGAGTCACAGTTCCCACCGTCCAACGGTACGTTCCGGTCGGATATCTCCGGCTCCGTAATCAAACCCATGTTAAAGTTTCTGTCCAAAACAAAGTCCTTCTTCTTCGTCGATATCTATACTTTTTTCCCTTGGGTCTCCGATCCAATCAACATCGATTTGGACTACGCTCTACTTGAATCCACCAATGTGACGTACACGGATCCGGTTTCGGGTCTGACCTACCACGACCTCTTCGATCAAAAGGTAGACGCTTTCATTTTCGCCATGAAGCGACTCGGCTACCCGGATATCCGGATCTGGATCGCCGAAACGGGTTGGCCCAGCGGCGGAGACTACGACCAGATTGGCGCCAACATCCACAACGCCGCTACTTACAACCGCAATGTGATCAAAAAGTTCACGGCCAAAACGCCGGTCGGAACGCCGGCTCGACCGGGCGTGGGGCTCCCCAGCTTCATATTCGCTTTGTTCAACGAGAACACGAAAGGGGGTCCGAGTACGGAGCGGAACTTCGGGTTGCTGTACCCGAACGGGTCGAATGTGTACCAGATTGACCTAACCGGGAAGACGCCCGAGTCCGAGTTTAAGCCGTTGCCGCCCGCGACAAATAATAAGCCGTATCCGGGGCCGATATGGTGCGTGGTTAAGGAGGGAGCCAATAAGACTGCGGTTGCAGAGGCTTTATCGGAGGCTTGTTCGCAGGGGAACAAAACTTGTGACCCGATTCAACCCGGGGGAATTGCTTTAAACCCAACTCGTTGGCCCAACACGCGAGCTATGCGTTTAGTGCTTATTGGGCTCAGTTTAGGAAGGCTGGTGGATTCTGCTACTTCGGTGGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001871 GO:0003006 GO:0003674 GO:0003824 GO:0004553 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010208 GO:0010584 GO:0010927 GO:0016020 GO:0016043 GO:0016787 GO:0016798 GO:0022414 GO:0022607 GO:0030198 GO:0030246 GO:0030247 GO:0031224 GO:0031225 GO:0031226 GO:0032501 GO:0032502 GO:0032989 GO:0043062 GO:0044085 GO:0044425 GO:0044459 GO:0044464 GO:0045229 GO:0046658 GO:0048229 GO:0048316 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048869 GO:0061458 GO:0071840 GO:0071944 GO:0085029

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_17 X8

Protein Analysis

444

Amino Acids

48.91

Weight (kDa)

8.48

Isoelectric Point (pI)

34.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_17	PF00332	28 - 349	1.3e-95	Glycosyl hydrolases family 17

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009912)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07320
fragaria_vesca	FvH4_2g18182 FvH4_2g18200
malus_domestica	MD05G1166600.v1.1 MD10G1156600.v1.1
prunus_persica	Prupe.8G194400_v2.0.a1
pyrus_communis	pycom05g15540 pycom10g13480
rosa_chinensis	RchiOBHm_Chr6g0283561 RchiOBHm_Chr6g0283571
rosa_laevigata	RLG00000012816
rosa_multiflora	Rmu_sc0005719.1_g000009 Rmu_sc0007194.1_g000001
rosa_roxburghii	Rroxscaffold_7G00185370 Rroxscaffold_7G00185400
rosa_rugosa	Rorug06G0155800
rosa_samantha	Rh6AG267700 Rh6BG270200 Rh6CG270000 Rh6DG263600
rosa_wichuraiana	Rw6G023180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	227, 311, 1066
AbsI	CCTCGAGG	1 cut(s)	200
Acc16I	TGCGCA	1 cut(s)	416
Acc65I	GGTACC	1 cut(s)	241
AccB1I	GGYRCC	3 cut(s)	182, 241, 839
AccBSI	CCGCTC	1 cut(s)	997
AccI	GTMKAC	1 cut(s)	738
AccII	CGCG	2 cut(s)	1094, 1264
AccIII	TCCGGA	1 cut(s)	783
AciI	CCGC	9 cut(s)	166, 816, 819, 858, 871, 997, 1088, 1092, 1160
AclWI	GGATC	5 cut(s)	626, 686, 699, 794, 800
AcoI	YGGCCR	4 cut(s)	75, 97, 477, 894
AcyI	GRCGYC	2 cut(s)	840, 1061
AfaI	GTAC	7 cut(s)	243, 300, 520, 686, 991, 1016, 1037
AfiI	CCNNNNNNNGG	6 cut(s)	294, 515, 701, 818, 932, 1115
AgsI	TTSAA	4 cut(s)	397, 668, 964, 1220
AjiI	CACGTC	1 cut(s)	487
AjuI	GAANNNNNNNTTGG	2 cut(s)	506, 538
AleI	CACNNNNGTG	1 cut(s)	677
AluBI	AGCT	6 cut(s)	7, 103, 142, 253, 945, 1268
AluI	AGCT	6 cut(s)	7, 103, 142, 253, 945, 1268
Alw21I	GWGCWC	2 cut(s)	255, 492
Alw26I	GTCTC	3 cut(s)	235, 631, 816
AlwI	GGATC	5 cut(s)	626, 686, 699, 794, 800
AlwNI	CAGNNNCTG	1 cut(s)	134
Ama87I	CYCGRG	4 cut(s)	200, 491, 1064, 1223
Aor13HI	TCCGGA	1 cut(s)	783
AoxI	GGCC	7 cut(s)	75, 97, 477, 809, 894, 1118, 1253
ApeKI	GCWGC	1 cut(s)	4
ArsI	GACNNNNNNTTYG	4 cut(s)	447, 479, 891, 923
Asp718I	GGTACC	1 cut(s)	241
AspLEI	GCGC	3 cut(s)	65, 417, 842
AspS9I	GGNCC	4 cut(s)	810, 983, 1118, 1254
AsuC2I	CCSGG	6 cut(s)	776, 927, 1054, 1116, 1224, 1225
AsuHPI	GGTGA	1 cut(s)	442
AvaI	CYCGRG	4 cut(s)	200, 491, 1064, 1223
AvaII	GGWCC	1 cut(s)	983
BamHI	GGATCC	1 cut(s)	691
BanI	GGYRCC	3 cut(s)	182, 241, 839
BanII	GRGCYC	3 cut(s)	255, 939, 1293
BauI	CACGAG	1 cut(s)	370
BbsI	GAAGAC	1 cut(s)	1064
Bbv12I	GWGCWC	2 cut(s)	255, 492
BbvI	GCAGC	1 cut(s)	16
BccI	CCATC	2 cut(s)	127, 481
BceAI	ACGGC	4 cut(s)	112, 909, 1066, 1093
BcgI	CGANNNNNNTGC	2 cut(s)	54, 88
BciVI	GTATCC	1 cut(s)	1122
BclI	TGATCA	1 cut(s)	879
BcnI	CCSGG	6 cut(s)	776, 927, 1054, 1116, 1224, 1225
BcoDI	GTCTC	3 cut(s)	235, 631, 816
BfaI	CTAG	1 cut(s)	1333
BfoI	RGCGCY	1 cut(s)	843
BfuI	GTATCC	1 cut(s)	1122
BglI	GCCNNNNNGGC	1 cut(s)	105
BisI	GCNGC	4 cut(s)	5, 817, 858, 1088
BlsI	GCNGC	4 cut(s)	6, 818, 859, 1089
Bme1390I	CCNGG	6 cut(s)	776, 927, 1054, 1116, 1224, 1225
Bme18I	GGWCC	1 cut(s)	983
BmeT110I	CYCGRG	4 cut(s)	200, 491, 1064, 1223
BmgBI	CACGTC	1 cut(s)	487
BmgT120I	GGNCC	4 cut(s)	810, 983, 1118, 1254
BmrFI	CCNGG	6 cut(s)	776, 927, 1054, 1116, 1224, 1225
BpiI	GAAGAC	1 cut(s)	1064
BpmI	CTGGAG	1 cut(s)	256
BpuMI	CCSGG	6 cut(s)	776, 927, 1054, 1116, 1224, 1225
Bsa29I	ATCGAT	1 cut(s)	645
BsaBI	GATNNNNATC	1 cut(s)	791
BsaHI	GRCGYC	2 cut(s)	840, 1061
BsaI	GGTCTC	1 cut(s)	631
BsaJI	CCNNGG	6 cut(s)	78, 442, 620, 1115, 1223, 1224
BsaWI	WCCGGW	3 cut(s)	525, 694, 783
BsaXI	ACNNNNNCTCC	2 cut(s)	254, 284
Bsc4I	CCNNNNNNNGG	6 cut(s)	294, 515, 701, 818, 932, 1115
Bse118I	RCCGGY	2 cut(s)	904, 916
Bse1I	ACTGG	1 cut(s)	273
Bse3DI	GCAATG	2 cut(s)	417, 880
Bse8I	GATNNNNATC	1 cut(s)	791
BseAI	TCCGGA	1 cut(s)	783
BseCI	ATCGAT	1 cut(s)	645
BseDI	CCNNGG	6 cut(s)	78, 442, 620, 1115, 1223, 1224
BseGI	GGATG	3 cut(s)	144, 195, 846
BseJI	GATNNNNATC	1 cut(s)	791
BseLI	CCNNNNNNNGG	6 cut(s)	294, 515, 701, 818, 932, 1115
BseMI	GCAATG	2 cut(s)	417, 880
BseMII	CTCAG	1 cut(s)	1306
BseNI	ACTGG	1 cut(s)	273
BseRI	GAGGAG	1 cut(s)	338
BseXI	GCAGC	1 cut(s)	16
BseYI	CCCAGC	4 cut(s)	7, 103, 812, 941
Bsh1236I	CGCG	2 cut(s)	1094, 1264
Bsh1285I	CGRYCG	3 cut(s)	530, 909, 926
BshFI	GGCC	7 cut(s)	77, 99, 479, 811, 896, 1120, 1255
BshNI	GGYRCC	3 cut(s)	182, 241, 839
BshVI	ATCGAT	1 cut(s)	645
BsiEI	CGRYCG	3 cut(s)	530, 909, 926
BsiHKAI	GWGCWC	2 cut(s)	255, 492
BsiHKCI	CYCGRG	4 cut(s)	200, 491, 1064, 1223
BslFI	GGGAC	2 cut(s)	299, 481
BslI	CCNNNNNNNGG	6 cut(s)	294, 515, 701, 818, 932, 1115
BsmAI	GTCTC	3 cut(s)	235, 631, 816
BsmFI	GGGAC	2 cut(s)	299, 481
BsnI	GGCC	7 cut(s)	77, 99, 479, 811, 896, 1120, 1255
Bso31I	GGTCTC	1 cut(s)	631
BsoBI	CYCGRG	4 cut(s)	200, 491, 1064, 1223
Bsp1286I	GDGCHC	4 cut(s)	255, 492, 939, 1293
Bsp13I	TCCGGA	1 cut(s)	783
Bsp143I	GATC	6 cut(s)	631, 691, 727, 786, 792, 879
BspACI	CCGC	9 cut(s)	166, 816, 819, 858, 871, 997, 1088, 1092, 1160
BspANI	GGCC	7 cut(s)	77, 99, 479, 811, 896, 1120, 1255
BspCNI	CTCAG	1 cut(s)	1305
BspDI	ATCGAT	1 cut(s)	645
BspEI	TCCGGA	1 cut(s)	783
BspFNI	CGCG	2 cut(s)	1094, 1264
BspPI	GGATC	5 cut(s)	626, 686, 699, 794, 800
BspT107I	GGYRCC	3 cut(s)	182, 241, 839
BspTNI	GGTCTC	1 cut(s)	631
BsrBI	CCGCTC	1 cut(s)	997
BsrDI	GCAATG	2 cut(s)	417, 880
BsrFI	RCCGGY	2 cut(s)	904, 916
BsrI	ACTGG	1 cut(s)	273
BssAI	RCCGGY	2 cut(s)	904, 916
BssECI	CCNNGG	6 cut(s)	78, 442, 620, 1115, 1223, 1224
BssMI	GATC	6 cut(s)	631, 691, 727, 786, 792, 879
BssNI	GRCGYC	2 cut(s)	840, 1061
BssSI	CACGAG	1 cut(s)	370
BssT1I	CCWWGG	2 cut(s)	78, 620
Bst2BI	CACGAG	1 cut(s)	370
Bst4CI	ACNGT	4 cut(s)	182, 501, 510, 518
Bst6I	CTCTTC	1 cut(s)	728
BstACI	GRCGYC	2 cut(s)	840, 1061
BstC8I	GCNNGC	5 cut(s)	101, 429, 918, 1092, 1266
BstDEI	CTNAG	1 cut(s)	1292
BstDSI	CCRYGG	1 cut(s)	442
BstF5I	GGATG	3 cut(s)	144, 195, 846
BstFNI	CGCG	2 cut(s)	1094, 1264
BstH2I	RGCGCY	1 cut(s)	843
BstHHI	GCGC	3 cut(s)	65, 417, 842
BstKTI	GATC	6 cut(s)	634, 694, 730, 789, 795, 882
BstMAI	GTCTC	3 cut(s)	235, 631, 816
BstMBI	GATC	6 cut(s)	631, 691, 727, 786, 792, 879
BstMCI	CGRYCG	3 cut(s)	530, 909, 926
BstMWI	GCNNNNNNNGC	6 cut(s)	105, 1087, 1261, 1270, 1279, 1288
BstNSI	RCATGY	1 cut(s)	431
BstSCI	CCNGG	6 cut(s)	774, 925, 1052, 1114, 1222, 1223
BstUI	CGCG	2 cut(s)	1094, 1264
BstV1I	GCAGC	1 cut(s)	16
BstV2I	GAAGAC	1 cut(s)	1064
BstX2I	RGATCY	2 cut(s)	691, 786
BstXI	CCANNNNNNTGG	1 cut(s)	1251
BstYI	RGATCY	2 cut(s)	691, 786
Bsu15I	ATCGAT	1 cut(s)	645
BsuI	GTATCC	1 cut(s)	1122
BsuRI	GGCC	7 cut(s)	77, 99, 479, 811, 896, 1120, 1255
BsuTUI	ATCGAT	1 cut(s)	645
BtgI	CCRYGG	1 cut(s)	442
BtrI	CACGTC	1 cut(s)	487
BtsCI	GGATG	3 cut(s)	144, 195, 846
Cac8I	GCNNGC	5 cut(s)	101, 429, 918, 1092, 1266
CaiI	CAGNNNCTG	1 cut(s)	134
CfoI	GCGC	3 cut(s)	65, 417, 842
Cfr10I	RCCGGY	2 cut(s)	904, 916
Cfr13I	GGNCC	4 cut(s)	810, 983, 1118, 1254
Cfr9I	CCCGGG	1 cut(s)	1223
ClaI	ATCGAT	1 cut(s)	645
CseI	GACGC	2 cut(s)	749, 1069
Csp6I	GTAC	7 cut(s)	242, 299, 519, 685, 990, 1015, 1036
CviAII	CATG	7 cut(s)	14, 163, 191, 424, 428, 559, 757
CviQI	GTAC	7 cut(s)	242, 299, 519, 685, 990, 1015, 1036
DdeI	CTNAG	1 cut(s)	1292
DinI	GGCGCC	1 cut(s)	841
DpnI	GATC	6 cut(s)	633, 693, 729, 788, 794, 881
DpnII	GATC	6 cut(s)	631, 691, 727, 786, 792, 879
DraI	TTTAAA	1 cut(s)	1239
DrdI	GACNNNNNNGTC	3 cut(s)	227, 311, 1066
DseDI	GACNNNNNNGTC	3 cut(s)	227, 311, 1066
EaeI	YGGCCR	4 cut(s)	75, 97, 477, 894
Eam1104I	CTCTTC	1 cut(s)	728
EarI	CTCTTC	1 cut(s)	728
EciI	GGCGGA	1 cut(s)	834
Ecl136II	GAGCTC	1 cut(s)	253
Eco130I	CCWWGG	2 cut(s)	78, 620
Eco24I	GRGCYC	3 cut(s)	255, 939, 1293
Eco31I	GGTCTC	1 cut(s)	631
Eco32I	GATATC	3 cut(s)	535, 604, 781
Eco47I	GGWCC	1 cut(s)	983
Eco53kI	GAGCTC	1 cut(s)	253
Eco88I	CYCGRG	4 cut(s)	200, 491, 1064, 1223
EcoICRI	GAGCTC	1 cut(s)	253
EcoRV	GATATC	3 cut(s)	535, 604, 781
EcoT14I	CCWWGG	2 cut(s)	78, 620
EcoT22I	ATGCAT	1 cut(s)	429
EcoT38I	GRGCYC	3 cut(s)	255, 939, 1293
EgeI	GGCGCC	1 cut(s)	841
EheI	GGCGCC	1 cut(s)	841
ErhI	CCWWGG	2 cut(s)	78, 620
FaeI	CATG	7 cut(s)	17, 166, 194, 427, 431, 562, 760
FalI	AAGNNNNNCTT	2 cut(s)	575, 607
FaqI	GGGAC	2 cut(s)	299, 481
FatI	CATG	7 cut(s)	13, 162, 190, 423, 427, 558, 756
FauI	CCCGC	2 cut(s)	159, 1099
FbaI	TGATCA	1 cut(s)	879
FblI	GTMKAC	1 cut(s)	738
Fnu4HI	GCNGC	4 cut(s)	5, 817, 858, 1088
FokI	GGATG	3 cut(s)	131, 182, 833
FriOI	GRGCYC	3 cut(s)	255, 939, 1293
Fsp4HI	GCNGC	4 cut(s)	5, 817, 858, 1088
FspBI	CTAG	1 cut(s)	1333
FspI	TGCGCA	1 cut(s)	416
GlaI	GCGC	3 cut(s)	64, 416, 841
GluI	GCNGC	4 cut(s)	5, 817, 858, 1088
GsaI	CCCAGC	4 cut(s)	11, 107, 816, 945
GsuI	CTGGAG	1 cut(s)	256
HaeII	RGCGCY	1 cut(s)	843
HaeIII	GGCC	7 cut(s)	77, 99, 479, 811, 896, 1120, 1255
HgaI	GACGC	2 cut(s)	749, 1069
HhaI	GCGC	3 cut(s)	65, 417, 842
Hin1I	GRCGYC	2 cut(s)	840, 1061
Hin1II	CATG	7 cut(s)	17, 166, 194, 427, 431, 562, 760
Hin6I	GCGC	3 cut(s)	63, 415, 840
HinP1I	GCGC	3 cut(s)	63, 415, 840
HinfI	GANTC	9 cut(s)	131, 447, 469, 494, 668, 765, 1067, 1216, 1313
HphI	GGTGA	1 cut(s)	442
Hpy166II	GTNNAC	6 cut(s)	91, 301, 687, 739, 891, 1036
Hpy188III	TCNNGA	3 cut(s)	466, 784, 790
Hpy8I	GTNNAC	6 cut(s)	91, 301, 687, 739, 891, 1036
Hpy99I	CGWCG	2 cut(s)	356, 602
HpyAV	CCTTC	4 cut(s)	38, 328, 598, 1296
HpyCH4III	ACNGT	4 cut(s)	182, 501, 510, 518
HpyCH4IV	ACGT	3 cut(s)	486, 521, 683
HpyCH4V	TGCA	3 cut(s)	4, 427, 1166
HpyF10VI	GCNNNNNNNGC	6 cut(s)	105, 1087, 1261, 1270, 1279, 1288
HpyF3I	CTNAG	1 cut(s)	1292
HpySE526I	ACGT	3 cut(s)	486, 521, 683
Hsp92I	GRCGYC	2 cut(s)	840, 1061
Hsp92II	CATG	7 cut(s)	17, 166, 194, 427, 431, 562, 760
HspAI	GCGC	3 cut(s)	63, 415, 840
KasI	GGCGCC	1 cut(s)	839
Kpn2I	TCCGGA	1 cut(s)	783
KpnI	GGTACC	1 cut(s)	245
KroI	GCCGGC	1 cut(s)	916
KroNI	GCCGGC	1 cut(s)	918
Ksp22I	TGATCA	1 cut(s)	879
Kzo9I	GATC	6 cut(s)	631, 691, 727, 786, 792, 879
LmnI	GCTCC	5 cut(s)	30, 548, 942, 994, 1145
Lsp1109I	GCAGC	1 cut(s)	16
MaeI	CTAG	1 cut(s)	1333
MaeII	ACGT	3 cut(s)	486, 521, 683
MaeIII	GTNAC	3 cut(s)	495, 679, 1208
MalI	GATC	6 cut(s)	633, 693, 729, 788, 794, 881
MbiI	CCGCTC	1 cut(s)	997
MboI	GATC	6 cut(s)	631, 691, 727, 786, 792, 879
MboII	GAAGA	5 cut(s)	37, 583, 586, 715, 1069
MflI	RGATCY	2 cut(s)	691, 786
MhlI	GDGCHC	4 cut(s)	255, 492, 939, 1293
MluCI	AATT	1 cut(s)	1230
Mly113I	GGCGCC	1 cut(s)	840
MlyI	GAGTC	5 cut(s)	140, 463, 503, 759, 1076
MmeI	TCCRAC	5 cut(s)	334, 357, 510, 537, 889
Mph1103I	ATGCAT	1 cut(s)	429
MroI	TCCGGA	1 cut(s)	783
MroNI	GCCGGC	1 cut(s)	916
MseI	TTAA	4 cut(s)	563, 1077, 1137, 1238
MslI	CAYNNNNRTG	3 cut(s)	306, 485, 677
MspA1I	CMGCKG	3 cut(s)	7, 103, 816
MspR9I	CCNGG	6 cut(s)	776, 927, 1054, 1116, 1224, 1225
MvnI	CGCG	2 cut(s)	1094, 1264
MwoI	GCNNNNNNNGC	6 cut(s)	105, 1087, 1261, 1270, 1279, 1288
NaeI	GCCGGC	1 cut(s)	918
NarI	GGCGCC	1 cut(s)	840
NciI	CCSGG	6 cut(s)	776, 927, 1054, 1116, 1224, 1225
NdeII	GATC	6 cut(s)	631, 691, 727, 786, 792, 879
NgoMIV	GCCGGC	1 cut(s)	916
NlaIII	CATG	7 cut(s)	17, 166, 194, 427, 431, 562, 760
NmeAIII	GCCGAG	2 cut(s)	53, 747
NmuCI	GTSAC	3 cut(s)	495, 679, 1208
NsbI	TGCGCA	1 cut(s)	416
NsiI	ATGCAT	1 cut(s)	429
NspI	RCATGY	1 cut(s)	431
OliI	CACNNNNGTG	1 cut(s)	677
PaeI	GCATGC	1 cut(s)	431
PaeR7I	CTCGAG	2 cut(s)	200, 491
PcsI	WCGNNNNNNNCGW	2 cut(s)	357, 723
PdiI	GCCGGC	1 cut(s)	918
PfeI	GAWTC	4 cut(s)	447, 668, 1216, 1313
PkrI	GCNGC	4 cut(s)	6, 818, 859, 1089
PleI	GAGTC	5 cut(s)	139, 463, 502, 759, 1075
PluTI	GGCGCC	1 cut(s)	843
PpsI	GAGTC	5 cut(s)	139, 463, 502, 759, 1075
Psp124BI	GAGCTC	1 cut(s)	255
PspFI	CCCAGC	4 cut(s)	7, 103, 812, 941
PspPI	GGNCC	4 cut(s)	810, 983, 1118, 1254
PspXI	VCTCGAGB	2 cut(s)	200, 491
PstNI	CAGNNNCTG	1 cut(s)	134
PsuI	RGATCY	2 cut(s)	691, 786
PvuII	CAGCTG	2 cut(s)	7, 103
RsaI	GTAC	7 cut(s)	243, 300, 520, 686, 991, 1016, 1037
RsaNI	GTAC	7 cut(s)	242, 299, 519, 685, 990, 1015, 1036
RseI	CAYNNNNRTG	3 cut(s)	306, 485, 677
SacI	GAGCTC	1 cut(s)	255
SaqAI	TTAA	4 cut(s)	563, 1077, 1137, 1238
SatI	GCNGC	4 cut(s)	5, 817, 858, 1088
Sau3AI	GATC	6 cut(s)	631, 691, 727, 786, 792, 879
Sau96I	GGNCC	4 cut(s)	810, 983, 1118, 1254
SchI	GAGTC	5 cut(s)	140, 463, 503, 759, 1076
ScrFI	CCNGG	6 cut(s)	776, 927, 1054, 1116, 1224, 1225
SduI	GDGCHC	4 cut(s)	255, 492, 939, 1293
SfoI	GGCGCC	1 cut(s)	841
Sfr274I	CTCGAG	2 cut(s)	200, 491
SinI	GGWCC	1 cut(s)	983
SlaI	CTCGAG	2 cut(s)	200, 491
SmaI	CCCGGG	1 cut(s)	1225
SmiMI	CAYNNNNRTG	3 cut(s)	306, 485, 677
SmlI	CTYRAG	2 cut(s)	200, 491
SmoI	CTYRAG	2 cut(s)	200, 491
SphI	GCATGC	1 cut(s)	431
Sse9I	AATT	1 cut(s)	1230
SsiI	CCGC	9 cut(s)	166, 816, 819, 858, 871, 997, 1088, 1092, 1160
SspDI	GGCGCC	1 cut(s)	839
SspMI	CTAG	1 cut(s)	1333
SstI	GAGCTC	1 cut(s)	255
StyD4I	CCNGG	6 cut(s)	774, 925, 1052, 1114, 1222, 1223
StyI	CCWWGG	2 cut(s)	78, 620
TaaI	ACNGT	4 cut(s)	182, 501, 510, 518
TaiI	ACGT	3 cut(s)	489, 524, 686
TaqI	TCGA	7 cut(s)	201, 492, 600, 645, 726, 922, 1028
TasI	AATT	1 cut(s)	1230
TauI	GCSGC	3 cut(s)	819, 860, 1090
TfiI	GAWTC	4 cut(s)	447, 668, 1216, 1313
Tru1I	TTAA	4 cut(s)	563, 1077, 1137, 1238
Tru9I	TTAA	4 cut(s)	563, 1077, 1137, 1238
TseFI	GTSAC	3 cut(s)	495, 679, 1208
TseI	GCWGC	1 cut(s)	4
Tsp45I	GTSAC	3 cut(s)	495, 679, 1208
TspDTI	ATGAA	4 cut(s)	37, 736, 773, 937
TspGWI	ACGGA	5 cut(s)	114, 459, 535, 704, 1007
TspMI	CCCGGG	1 cut(s)	1223
VpaK11BI	GGWCC	1 cut(s)	983
XceI	RCATGY	1 cut(s)	431
XhoI	CTCGAG	2 cut(s)	200, 491
XmaI	CCCGGG	1 cut(s)	1223
XmiI	GTMKAC	1 cut(s)	738
XspI	CTAG	1 cut(s)	1333
Zsp2I	ATGCAT	1 cut(s)	429

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.