AT3G09590

peptidase inhibitor activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0019556
Physical Location & Seq
Forward (+)
2944938 .. 2945513
576 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G09590.1

Sequence Viewer

Length: 561 bp
ATGTCTGTAACGTTGTCTCATCCATCATCATGTCTTCTTCTTCTCTTCCTTCTCTTTTCCGGTCATCCCTCCGTCCTCGGAACCTCCATCCCCGACGCGGTGAACACGGCGGCGCGTTTGGTAAACAGAGCGAGAAGAGCAAAACTGTCGAGAGAATTTCTACAAGCGCACAACGATGCACGTGTTTCTTCAGGCGTGCCAACGCTCGGATGGGACAGAGACCTGGCCCGATTCGCTGATAAATGGGCTAAACAACGTAAGTCCGATTGCAGTATGATACATTCAGGTGGGCCTTACGGTGAGAACATTTTCTGGCACCGGCGTAAGAAGACGTGGTCGCCGGAGAAAGTGGTGACGAGATGGTTTGAGGAAAGGTTTAACTACGACGTGAAAACAAACACGTGCGCACCGGGAAAGATGTGCGGCCATTACACGCAGATGGTGTGGAGAGAGACCACAGCCGTTGGATGCGCACGTGTGAAATGCCATAACGGTCGTGGCTATCTTGTGGTGTGTGAATATGATCCACGCGGGAATTACGAAGGTGAAAGACCATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CAP

Protein Analysis

186

Amino Acids

21.21

Weight (kDa)

9.58

Isoelectric Point (pI)

43.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CAP PF00188 54 - 174 1.7e-24 Cysteine-rich secretory protein family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0019556)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G09590 AT5G02730
malus_domestica MD02G1191600.v1.1 MD15G1302700.v1.1
prunus_persica Prupe.6G214000_v2.0.a1
pyrus_communis pycom02g15640 pycom15g26600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 406, 472
AccB1I GGYRCC 1 cut(s) 315
AccII CGCG 3 cut(s) 98, 115, 531
AciI CCGC 4 cut(s) 98, 110, 423, 531
AclI AACGTT 1 cut(s) 11
AclWI GGATC 1 cut(s) 518
AcoI YGGCCR 1 cut(s) 424
AcsI RAATTY 1 cut(s) 155
AcuI CTGAAG 1 cut(s) 174
AcvI CACGTG 3 cut(s) 182, 402, 476
AfiI CCNNNNNNNGG 2 cut(s) 97, 206
AflIII ACRYGT 3 cut(s) 181, 399, 475
AjiI CACGTC 2 cut(s) 333, 388
AjnI CCWGG 1 cut(s) 222
Alw26I GTCTC 3 cut(s) 21, 213, 446
AlwI GGATC 1 cut(s) 518
AoxI GGCC 3 cut(s) 225, 290, 424
ApoI RAATTY 1 cut(s) 155
Asp700I GAANNNNTTC 1 cut(s) 308
AspLEI GCGC 4 cut(s) 115, 169, 407, 473
AspS9I GGNCC 2 cut(s) 226, 290
AsuC2I CCSGG 1 cut(s) 411
AsuHPI GGTGA 4 cut(s) 112, 311, 364, 557
BanI GGYRCC 1 cut(s) 315
BbrPI CACGTG 3 cut(s) 182, 402, 476
BbsI GAAGAC 2 cut(s) 26, 335
BccI CCATC 5 cut(s) 31, 95, 204, 354, 433
BceAI ACGGC 2 cut(s) 123, 446
BcgI CGANNNNNNTGC 2 cut(s) 129, 163
BciT130I CCWGG 1 cut(s) 224
BcnI CCSGG 1 cut(s) 411
BcoDI GTCTC 3 cut(s) 21, 213, 446
BisI GCNGC 2 cut(s) 111, 424
BlsI GCNGC 2 cut(s) 112, 425
Bme1390I CCNGG 2 cut(s) 224, 411
BmgBI CACGTC 2 cut(s) 333, 388
BmgT120I GGNCC 2 cut(s) 226, 290
BmiI GGNNCC 2 cut(s) 82, 317
BmrFI CCNGG 2 cut(s) 224, 411
BmsI GCATC 2 cut(s) 166, 458
BpiI GAAGAC 2 cut(s) 26, 335
BpuMI CCSGG 1 cut(s) 411
BsaAI YACGTR 3 cut(s) 182, 402, 476
BsaI GGTCTC 2 cut(s) 213, 446
BsaJI CCNNGG 1 cut(s) 76
BsaWI WCCGGW 1 cut(s) 59
Bsc4I CCNNNNNNNGG 2 cut(s) 97, 206
Bse118I RCCGGY 1 cut(s) 318
BseBI CCWGG 1 cut(s) 224
BseDI CCNNGG 1 cut(s) 76
BseGI GGATG 5 cut(s) 19, 64, 87, 215, 473
BseLI CCNNNNNNNGG 2 cut(s) 97, 206
Bsh1236I CGCG 3 cut(s) 98, 115, 531
Bsh1285I CGRYCG 1 cut(s) 496
BshFI GGCC 3 cut(s) 227, 292, 426
BshNI GGYRCC 1 cut(s) 315
BsiEI CGRYCG 1 cut(s) 496
BsiSI CCGG 4 cut(s) 60, 319, 341, 410
BslFI GGGAC 1 cut(s) 227
BslI CCNNNNNNNGG 2 cut(s) 97, 206
BsmAI GTCTC 3 cut(s) 21, 213, 446
BsmFI GGGAC 1 cut(s) 227
BsnI GGCC 3 cut(s) 227, 292, 426
Bso31I GGTCTC 2 cut(s) 213, 446
Bsp143I GATC 1 cut(s) 523
BspACI CCGC 4 cut(s) 98, 110, 423, 531
BspANI GGCC 3 cut(s) 227, 292, 426
BspFNI CGCG 3 cut(s) 98, 115, 531
BspLI GGNNCC 2 cut(s) 82, 317
BspPI GGATC 1 cut(s) 518
BspQI GCTCTTC 1 cut(s) 130
BspT107I GGYRCC 1 cut(s) 315
BspTNI GGTCTC 2 cut(s) 213, 446
BsrFI RCCGGY 1 cut(s) 318
BssAI RCCGGY 1 cut(s) 318
BssECI CCNNGG 1 cut(s) 76
BssMI GATC 1 cut(s) 523
Bst2UI CCWGG 1 cut(s) 224
Bst4CI ACNGT 3 cut(s) 147, 299, 494
Bst6I CTCTTC 2 cut(s) 50, 130
BstBAI YACGTR 3 cut(s) 182, 402, 476
BstC8I GCNNGC 1 cut(s) 197
BstF5I GGATG 5 cut(s) 19, 64, 87, 215, 473
BstFNI CGCG 3 cut(s) 98, 115, 531
BstHHI GCGC 4 cut(s) 115, 169, 407, 473
BstKTI GATC 1 cut(s) 526
BstMAI GTCTC 3 cut(s) 21, 213, 446
BstMBI GATC 1 cut(s) 523
BstMCI CGRYCG 1 cut(s) 496
BstMWI GCNNNNNNNGC 2 cut(s) 137, 233
BstNI CCWGG 1 cut(s) 224
BstSCI CCNGG 2 cut(s) 222, 409
BstUI CGCG 3 cut(s) 98, 115, 531
BstV2I GAAGAC 2 cut(s) 26, 335
BsuRI GGCC 3 cut(s) 227, 292, 426
BtrI CACGTC 2 cut(s) 333, 388
BtsCI GGATG 5 cut(s) 19, 64, 87, 215, 473
Cac8I GCNNGC 1 cut(s) 197
CfoI GCGC 4 cut(s) 115, 169, 407, 473
Cfr10I RCCGGY 1 cut(s) 318
Cfr13I GGNCC 2 cut(s) 226, 290
CseI GACGC 1 cut(s) 104
CspCI CAANNNNNGTGG 2 cut(s) 445, 480
CviAII CATG 1 cut(s) 30
CviJI RGCY 6 cut(s) 227, 248, 292, 426, 461, 501
CviKI_1 RGCY 6 cut(s) 227, 248, 292, 426, 461, 501
DpnI GATC 1 cut(s) 525
DpnII GATC 1 cut(s) 523
EaeI YGGCCR 1 cut(s) 424
Eam1104I CTCTTC 2 cut(s) 50, 130
EarI CTCTTC 2 cut(s) 50, 130
Eco31I GGTCTC 2 cut(s) 213, 446
Eco57I CTGAAG 1 cut(s) 174
Eco72I CACGTG 3 cut(s) 182, 402, 476
EcoRII CCWGG 1 cut(s) 222
FaeI CATG 1 cut(s) 33
FaiI YATR 4 cut(s) 31, 275, 489, 522
FaqI GGGAC 1 cut(s) 227
FatI CATG 1 cut(s) 29
FauI CCCGC 1 cut(s) 524
Fnu4HI GCNGC 2 cut(s) 111, 424
FokI GGATG 5 cut(s) 6, 51, 74, 222, 480
Fsp4HI GCNGC 2 cut(s) 111, 424
FspAI RTGCGCAY 2 cut(s) 406, 472
FspI TGCGCA 2 cut(s) 406, 472
GlaI GCGC 4 cut(s) 114, 168, 406, 472
GluI GCNGC 2 cut(s) 111, 424
HaeIII GGCC 3 cut(s) 227, 292, 426
HapII CCGG 4 cut(s) 60, 319, 341, 410
HgaI GACGC 1 cut(s) 104
HhaI GCGC 4 cut(s) 115, 169, 407, 473
Hin1II CATG 1 cut(s) 33
Hin6I GCGC 4 cut(s) 113, 167, 405, 471
HinP1I GCGC 4 cut(s) 113, 167, 405, 471
HinfI GANTC 1 cut(s) 231
HpaII CCGG 4 cut(s) 60, 319, 341, 410
HphI GGTGA 4 cut(s) 112, 311, 364, 557
Hpy166II GTNNAC 2 cut(s) 103, 124
Hpy188I TCNGA 3 cut(s) 80, 209, 265
Hpy188III TCNNGA 1 cut(s) 150
Hpy8I GTNNAC 2 cut(s) 103, 124
Hpy99I CGWCG 2 cut(s) 98, 389
HpyAV CCTTC 2 cut(s) 59, 536
HpyCH4III ACNGT 3 cut(s) 147, 299, 494
HpyCH4IV ACGT 7 cut(s) 11, 181, 256, 332, 387, 401, 475
HpyCH4V TGCA 2 cut(s) 179, 270
HpyF10VI GCNNNNNNNGC 2 cut(s) 137, 233
HpySE526I ACGT 7 cut(s) 11, 181, 256, 332, 387, 401, 475
Hsp92II CATG 1 cut(s) 33
HspAI GCGC 4 cut(s) 113, 167, 405, 471
Kzo9I GATC 1 cut(s) 523
LguI GCTCTTC 1 cut(s) 130
LpnPI CCDG 9 cut(s) 73, 177, 209, 236, 270, 298, 332, 354, 423
LweI GCATC 2 cut(s) 166, 458
MaeII ACGT 7 cut(s) 11, 181, 256, 332, 387, 401, 475
MaeIII GTNAC 2 cut(s) 7, 352
MalI GATC 1 cut(s) 525
MboI GATC 1 cut(s) 523
MboII GAAGA 7 cut(s) 26, 29, 32, 37, 147, 180, 340
MluCI AATT 2 cut(s) 155, 535
MmeI TCCRAC 1 cut(s) 445
MnlI CCTC 4 cut(s) 79, 86, 94, 361
MroXI GAANNNNTTC 1 cut(s) 308
MseI TTAA 1 cut(s) 378
MslI CAYNNNNRTG 4 cut(s) 28, 174, 285, 437
MspI CCGG 4 cut(s) 60, 319, 341, 410
MspR9I CCNGG 2 cut(s) 224, 411
MvaI CCWGG 1 cut(s) 224
MvnI CGCG 3 cut(s) 98, 115, 531
MwoI GCNNNNNNNGC 2 cut(s) 137, 233
NciI CCSGG 1 cut(s) 411
NdeII GATC 1 cut(s) 523
NlaIII CATG 1 cut(s) 33
NlaIV GGNNCC 2 cut(s) 82, 317
NmuCI GTSAC 1 cut(s) 352
NsbI TGCGCA 2 cut(s) 406, 472
PciSI GCTCTTC 1 cut(s) 130
PdmI GAANNNNTTC 1 cut(s) 308
PfeI GAWTC 1 cut(s) 231
PflFI GACNNNGTC 1 cut(s) 334
PkrI GCNGC 2 cut(s) 112, 425
PmaCI CACGTG 3 cut(s) 182, 402, 476
PmlI CACGTG 3 cut(s) 182, 402, 476
Ppu21I YACGTR 3 cut(s) 182, 402, 476
Psp1406I AACGTT 1 cut(s) 11
Psp6I CCWGG 1 cut(s) 222
PspCI CACGTG 3 cut(s) 182, 402, 476
PspGI CCWGG 1 cut(s) 222
PspN4I GGNNCC 2 cut(s) 82, 317
PspPI GGNCC 2 cut(s) 226, 290
PsyI GACNNNGTC 1 cut(s) 334
RseI CAYNNNNRTG 4 cut(s) 28, 174, 285, 437
SapI GCTCTTC 1 cut(s) 130
SaqAI TTAA 1 cut(s) 378
SatI GCNGC 2 cut(s) 111, 424
Sau3AI GATC 1 cut(s) 523
Sau96I GGNCC 2 cut(s) 226, 290
ScrFI CCNGG 2 cut(s) 224, 411
SfaNI GCATC 2 cut(s) 166, 458
SgrAI CRCCGGYG 1 cut(s) 318
SmiMI CAYNNNNRTG 4 cut(s) 28, 174, 285, 437
Sse9I AATT 2 cut(s) 155, 535
SsiI CCGC 4 cut(s) 98, 110, 423, 531
StyD4I CCNGG 2 cut(s) 222, 409
TaaI ACNGT 3 cut(s) 147, 299, 494
TaiI ACGT 7 cut(s) 14, 184, 259, 335, 390, 404, 478
TaqI TCGA 1 cut(s) 149
TasI AATT 2 cut(s) 155, 535
TauI GCSGC 2 cut(s) 113, 426
TfiI GAWTC 1 cut(s) 231
Tru1I TTAA 1 cut(s) 378
Tru9I TTAA 1 cut(s) 378
TseFI GTSAC 1 cut(s) 352
Tsp45I GTSAC 1 cut(s) 352
TspGWI ACGGA 1 cut(s) 61
Tth111I GACNNNGTC 1 cut(s) 334
XapI RAATTY 1 cut(s) 155
XcmI CCANNNNNNNNNTGG 2 cut(s) 207, 494
XmnI GAANNNNTTC 1 cut(s) 308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.