AT3G11760

N-terminal C2 in EEIG1 and EHBP1 proteins

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0008328
Physical Location & Seq
Forward (+)
3717894 .. 3721251
3358 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G11760.1

Sequence Viewer

Length: 2109 bp
ATGGTGGTGAAGATGATGAAGTGGCGGCCATGGCCGCCGTTAGTTACGAGGAAATACGAGGTGAAGCTTTCCGTGAAGAAGCTTGAGGGTTGGGATCTGGTGAGGGAAGGTGTACCGGAGAAAGATAGATTAACGGTGGAGATTCGTTGGAAAGGTCCTAAGGCGACATTGGGATCTTTGAGAAGGTCGGTGAAGAGGAATTTCACCAAGGAAGCTGTGGGAGAAAGCGATGTCGTTTCATGGGAAGATGAAGAGTTTCAGAGCTTATGTTCACTCACTTCTTACAAGGACAGTTTGTTTTATCCTTGGGAGATAACTTTCTCTGTCTTCACCAATGGAATGAAGCAAGGGCAGAAGAATAAAGCTCCTGTTGTTGGAACGGCATTTTTGAATCTTGCTGAGTACGCGTGTGTGACCGATAAAAAAGAATTCGATATAAACATACCACTTACGCTCTCTGCTTGTGTGGCCTCTGAGACACATCCTTTGCTCTTTGTATCATTGAGCCTGCTTGAGCTTAGAACTACTCCAGAAACATCAGACTCGGCAGCACAAACCGCGGTTGTGCCTTTGCCTCTCCCATCTCCATCGCCACAACAGCCTACTGAAACTCACTCAGTTGAGAAGGAGGATGTCTCTGCAATCAAAGCTGGTCTCAGAAAAGTCAAGATTTTCACAGAGTTTGTTTCTACAAGGAAAGCCAAGAAGGCTTGCAGGGAAGAAGAAGGCAGATTCTCAAGCTTTGAATCATCAGAATCGCTTGATGATTTCGAGACAGATTTTGATGAAGGCAAAGAAGAATTGATGAGTATGAGAAAATCTTTCTCTTATGGACCTTTGTCTTATGCAAATGGTGTGGGAACTTCATTAAACTGTGGCGCGAAAGTTAGCGATGAAGACGAAGATTGGGTTTATTATAGCCACAGGAAATCAGACGTTGGAGCAGGTTGCTCTGATGCTGAAGATTCCGCTGCGGGTTTGGTGTATGAGGCATCACTGCTTCCACGGCGTAGCATATTGCCATGGAGAAAGAGGAAGTTGAGCTTTAGGTCTCCGAAATCCAAAGGAGAGCCTTTGTTAAAGAAGGATAATGGAGAAGAAGGTGGAGATGACATTGATTTTGATCGGAGGCAACTTAGCTCAGATGAAGCTCATCCTCCATTTGGGAGCAAGATTGATGAAGATTCATCTGCTAATCCACGAACTTCGTTCTCGGAGTTTGGAGAAGACAGTTTTGCGATTGGAAGTTGGGAGGAGAAAGAAGTGATAAGCCGAGATGGACACATGAAGCTCCAGACAAGTGTCTTTCTTGCTTCTATTGACCAGAGAAGCGAGCGAGCAGCTGGTGAGAGTGCATGCACTGCTCTTGTAGCGGTCATTGCGGATTGGTTTCAGAAGAATGGTAATCTCATGCCAATCAAGTCTCAGTTCGATAGTTTGATCAGAGAAGGTTCTTTAGAATGGAGAAACCTCTGCGAAAACGAAACGTATATGCAGAAATTCCCTGACAAGCATTTCGATCTTGATACCGTGCTACAAGCAAAGATACGGCCTCTAACCGTTATCCCCGGAAAATCCTTTGTTGGGTTTTTCCATCCTGATGGGATGATCAACGAGGGTAGATTCGAGTTTCTACAAGGCGCAATGTCTTTCGATAGTATTTGGGCTGAAATTATTAGTCTGGAGGAAAGCTCGGCGAATGGTGATAGCTATGATGATGATTCGCCACCGCACGTTTACATAGTGAGTTGGAACGATCACTTCTTTGTCCTCAAAGTTGAAAAAGAAGCTTACTATATCATTGACACACTTGGAGAAAGGCTTTACGAGGGTTGTGATCAAGCTTACGTTTTGAAATTCGACCATAAAACCGTCATCCACAAGATTCTTCACACAGAGGAAGCAGGATCCGAATCAGAACCTGAATCAGAGATTTTGAGCAGAGGGAAGGAGTCATGTAAAGAGTATATTAAGAATTTCTTGGCGGCCATACCAATTAGGGAGTTGCAAGAGGATATCAAGAAAGGATTAGCCTCAACCGCGCCTGTTCATCACCGTTTACAGATCGAGTTTCATTACACCACAAACGCAGAGATTACCAGTCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NT-C2

Protein Analysis

702

Amino Acids

79.17

Weight (kDa)

5.12

Isoelectric Point (pI)

50.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NT-C2 PF10358 18 - 176 3.6e-09 N-terminal C2 in EEIG1 and EHBP1 proteins
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 935
AccII CGCG 4 cut(s) 407, 560, 881, 2042
AclWI GGATC 4 cut(s) 102, 181, 1902, 1915
AcoI YGGCCR 3 cut(s) 26, 32, 1986
AcsI RAATTY 5 cut(s) 199, 428, 1499, 1856, 1975
AcuI CTGAAG 1 cut(s) 981
AfaI GTAC 2 cut(s) 114, 404
AfiI CCNNNNNNNGG 3 cut(s) 374, 1163, 1584
AflIII ACRYGT 1 cut(s) 405
AgsI TTSAA 4 cut(s) 391, 746, 1781, 1855
Alw26I GTCTC 6 cut(s) 470, 640, 659, 767, 1056, 1428
AlwI GGATC 4 cut(s) 102, 181, 1902, 1915
AlwNI CAGNNNCTG 1 cut(s) 1922
AoxI GGCC 5 cut(s) 26, 32, 468, 1550, 1986
ApeKI GCWGC 3 cut(s) 548, 971, 1340
ApoI RAATTY 5 cut(s) 199, 428, 1499, 1856, 1975
ArsI GACNNNNNNTTYG 6 cut(s) 469, 501, 1103, 1135, 1499, 1531
Asp700I GAANNNNTTC 1 cut(s) 255
AspLEI GCGC 3 cut(s) 881, 1643, 2044
AspS9I GGNCC 2 cut(s) 155, 833
AsuC2I CCSGG 1 cut(s) 1569
AsuHPI GGTGA 9 cut(s) 19, 73, 112, 196, 202, 322, 1358, 1715, 2045
AvaII GGWCC 2 cut(s) 155, 833
AxyI CCTNAGG 1 cut(s) 159
BamHI GGATCC 1 cut(s) 1907
BbsI GAAGAC 3 cut(s) 319, 903, 1233
BbvI GCAGC 3 cut(s) 560, 958, 1352
BccI CCATC 5 cut(s) 589, 595, 1271, 1595, 1602
BceAI ACGGC 4 cut(s) 22, 396, 1022, 1565
BclI TGATCA 3 cut(s) 1440, 1608, 1837
BcnI CCSGG 1 cut(s) 1569
BcoDI GTCTC 6 cut(s) 470, 640, 659, 767, 1056, 1428
BfuAI ACCTGC 1 cut(s) 935
BglI GCCNNNNNGGC 1 cut(s) 707
BisI GCNGC 6 cut(s) 26, 35, 549, 972, 1341, 1986
BlsI GCNGC 6 cut(s) 27, 36, 550, 973, 1342, 1987
Bme1390I CCNGG 1 cut(s) 1569
Bme18I GGWCC 2 cut(s) 155, 833
BmgT120I GGNCC 2 cut(s) 155, 833
BmiI GGNNCC 1 cut(s) 1909
BmrFI CCNGG 1 cut(s) 1569
BmsI GCATC 2 cut(s) 946, 1001
BoxI GACNNNNGTC 2 cut(s) 838, 1301
BpiI GAAGAC 3 cut(s) 319, 903, 1233
BplI GAGNNNNNCTC 4 cut(s) 620, 652, 1676, 1708
BpmI CTGGAG 3 cut(s) 513, 1277, 1703
BpuEI CTTGAG 3 cut(s) 104, 533, 721
BpuMI CCSGG 1 cut(s) 1569
BsaBI GATNNNNATC 2 cut(s) 1122, 1912
BsaI GGTCTC 2 cut(s) 659, 1056
BsaJI CCNNGG 7 cut(s) 29, 207, 305, 558, 1004, 1022, 1567
BsaWI WCCGGW 1 cut(s) 115
Bsc4I CCNNNNNNNGG 3 cut(s) 374, 1163, 1584
Bse1I ACTGG 1 cut(s) 2100
Bse21I CCTNAGG 1 cut(s) 159
Bse3DI GCAATG 2 cut(s) 1377, 1650
Bse8I GATNNNNATC 2 cut(s) 1122, 1912
BseDI CCNNGG 7 cut(s) 29, 207, 305, 558, 1004, 1022, 1567
BseGI GGATG 6 cut(s) 481, 637, 1153, 1594, 1611, 1875
BseJI GATNNNNATC 2 cut(s) 1122, 1912
BseLI CCNNNNNNNGG 3 cut(s) 374, 1163, 1584
BseMI GCAATG 2 cut(s) 1377, 1650
BseMII CTCAG 6 cut(s) 390, 465, 630, 670, 1155, 1439
BseNI ACTGG 1 cut(s) 2100
BseRI GAGGAG 1 cut(s) 1268
BseXI GCAGC 3 cut(s) 560, 958, 1352
Bsh1236I CGCG 4 cut(s) 407, 560, 881, 2042
BshFI GGCC 5 cut(s) 28, 34, 470, 1552, 1988
BsiSI CCGG 2 cut(s) 116, 1569
BslI CCNNNNNNNGG 3 cut(s) 374, 1163, 1584
BsmAI GTCTC 6 cut(s) 470, 640, 659, 767, 1056, 1428
BsnI GGCC 5 cut(s) 28, 34, 470, 1552, 1988
Bso31I GGTCTC 2 cut(s) 659, 1056
Bsp19I CCATGG 2 cut(s) 29, 1022
BspANI GGCC 5 cut(s) 28, 34, 470, 1552, 1988
BspCNI CTCAG 6 cut(s) 391, 466, 629, 669, 1154, 1438
BspFNI CGCG 4 cut(s) 407, 560, 881, 2042
BspLI GGNNCC 1 cut(s) 1909
BspMI ACCTGC 1 cut(s) 935
BspPI GGATC 4 cut(s) 102, 181, 1902, 1915
BspTNI GGTCTC 2 cut(s) 659, 1056
BsrDI GCAATG 2 cut(s) 1377, 1650
BsrI ACTGG 1 cut(s) 2100
BssECI CCNNGG 7 cut(s) 29, 207, 305, 558, 1004, 1022, 1567
BssT1I CCWWGG 4 cut(s) 29, 207, 305, 1022
Bst4CI ACNGT 8 cut(s) 136, 293, 875, 1232, 1531, 1561, 1873, 2057
Bst6I CTCTTC 2 cut(s) 188, 246
BstAPI GCANNNNNTGC 1 cut(s) 1361
BstC8I GCNNGC 5 cut(s) 509, 712, 1334, 1338, 1357
BstDEI CTNAG 9 cut(s) 159, 399, 474, 518, 616, 656, 1136, 1141, 1425
BstDSI CCRYGG 4 cut(s) 29, 558, 1004, 1022
BstF5I GGATG 6 cut(s) 481, 637, 1153, 1594, 1611, 1875
BstFNI CGCG 4 cut(s) 407, 560, 881, 2042
BstHHI GCGC 3 cut(s) 881, 1643, 2044
BstMAI GTCTC 6 cut(s) 470, 640, 659, 767, 1056, 1428
BstNSI RCATGY 1 cut(s) 1359
BstPAI GACNNNNGTC 2 cut(s) 838, 1301
BstSCI CCNGG 1 cut(s) 1567
BstUI CGCG 4 cut(s) 407, 560, 881, 2042
BstV1I GCAGC 3 cut(s) 560, 958, 1352
BstV2I GAAGAC 3 cut(s) 319, 903, 1233
BstX2I RGATCY 3 cut(s) 94, 173, 1907
BstXI CCANNNNNNTGG 1 cut(s) 1601
BstYI RGATCY 3 cut(s) 94, 173, 1907
Bsu36I CCTNAGG 1 cut(s) 159
BsuRI GGCC 5 cut(s) 28, 34, 470, 1552, 1988
BtgI CCRYGG 4 cut(s) 29, 558, 1004, 1022
BtgZI GCGATG 3 cut(s) 243, 573, 906
BtsCI GGATG 6 cut(s) 481, 637, 1153, 1594, 1611, 1875
BtsI GCAGTG 2 cut(s) 995, 1359
BtsIMutI CAGTG 2 cut(s) 995, 1359
BveI ACCTGC 1 cut(s) 935
Cac8I GCNNGC 5 cut(s) 509, 712, 1334, 1338, 1357
CaiI CAGNNNCTG 1 cut(s) 1922
CfoI GCGC 3 cut(s) 881, 1643, 2044
Cfr13I GGNCC 2 cut(s) 155, 833
Cfr42I CCGCGG 1 cut(s) 561
Csp6I GTAC 2 cut(s) 113, 403
CspCI CAANNNNNGTGG 2 cut(s) 837, 872
CviAII CATG 7 cut(s) 30, 240, 1023, 1285, 1356, 1411, 1956
CviQI GTAC 2 cut(s) 113, 403
DdeI CTNAG 9 cut(s) 159, 399, 474, 518, 616, 656, 1136, 1141, 1425
EaeI YGGCCR 3 cut(s) 26, 32, 1986
Eam1104I CTCTTC 2 cut(s) 188, 246
EarI CTCTTC 2 cut(s) 188, 246
Eco130I CCWWGG 4 cut(s) 29, 207, 305, 1022
Eco31I GGTCTC 2 cut(s) 659, 1056
Eco32I GATATC 1 cut(s) 2017
Eco47I GGWCC 2 cut(s) 155, 833
Eco57I CTGAAG 1 cut(s) 981
Eco81I CCTNAGG 1 cut(s) 159
EcoO109I RGGNCCY 1 cut(s) 155
EcoRI GAATTC 1 cut(s) 428
EcoRV GATATC 1 cut(s) 2017
EcoT14I CCWWGG 4 cut(s) 29, 207, 305, 1022
ErhI CCWWGG 4 cut(s) 29, 207, 305, 1022
FaeI CATG 7 cut(s) 33, 243, 1026, 1288, 1359, 1414, 1959
FalI AAGNNNNNCTT 4 cut(s) 1028, 1060, 1964, 1996
FatI CATG 7 cut(s) 29, 239, 1022, 1284, 1355, 1410, 1955
FauI CCCGC 1 cut(s) 967
FbaI TGATCA 3 cut(s) 1440, 1608, 1837
Fnu4HI GCNGC 6 cut(s) 26, 35, 549, 972, 1341, 1986
FokI GGATG 6 cut(s) 468, 644, 1140, 1581, 1618, 1862
Fsp4HI GCNGC 6 cut(s) 26, 35, 549, 972, 1341, 1986
GlaI GCGC 3 cut(s) 880, 1642, 2043
GluI GCNGC 6 cut(s) 26, 35, 549, 972, 1341, 1986
GsuI CTGGAG 3 cut(s) 513, 1277, 1703
HaeIII GGCC 5 cut(s) 28, 34, 470, 1552, 1988
HapII CCGG 2 cut(s) 116, 1569
HhaI GCGC 3 cut(s) 881, 1643, 2044
Hin1II CATG 7 cut(s) 33, 243, 1026, 1288, 1359, 1414, 1959
Hin6I GCGC 3 cut(s) 879, 1641, 2042
HinP1I GCGC 3 cut(s) 879, 1641, 2042
HindIII AAGCTT 5 cut(s) 65, 80, 739, 1788, 1842
HpaII CCGG 2 cut(s) 116, 1569
HphI GGTGA 9 cut(s) 19, 73, 112, 196, 202, 322, 1358, 1715, 2045
Hpy166II GTNNAC 4 cut(s) 113, 272, 1738, 2060
Hpy188III TCNNGA 8 cut(s) 530, 667, 772, 1294, 1523, 1598, 1682, 2020
Hpy8I GTNNAC 4 cut(s) 113, 272, 1738, 2060
HpyCH4III ACNGT 8 cut(s) 136, 293, 875, 1232, 1531, 1561, 1873, 2057
HpyCH4IV ACGT 4 cut(s) 936, 1487, 1734, 1848
HpyCH4V TGCA 7 cut(s) 641, 714, 848, 1355, 1359, 1495, 2008
HpyF3I CTNAG 9 cut(s) 159, 399, 474, 518, 616, 656, 1136, 1141, 1425
HpySE526I ACGT 4 cut(s) 936, 1487, 1734, 1848
Hsp92II CATG 7 cut(s) 33, 243, 1026, 1288, 1359, 1414, 1959
HspAI GCGC 3 cut(s) 879, 1641, 2042
Ksp22I TGATCA 3 cut(s) 1440, 1608, 1837
KspI CCGCGG 1 cut(s) 561
LmnI GCTCC 4 cut(s) 370, 941, 1167, 1296
Lsp1109I GCAGC 3 cut(s) 560, 958, 1352
LweI GCATC 2 cut(s) 946, 1001
MaeII ACGT 4 cut(s) 936, 1487, 1734, 1848
MaeIII GTNAC 2 cut(s) 43, 412
MflI RGATCY 3 cut(s) 94, 173, 1907
MluCI AATT 8 cut(s) 199, 428, 800, 1499, 1671, 1856, 1975, 1995
MluI ACGCGT 1 cut(s) 405
MlyI GAGTC 2 cut(s) 536, 1961
MmeI TCCRAC 4 cut(s) 128, 355, 919, 1730
MroXI GAANNNNTTC 1 cut(s) 255
MseI TTAA 4 cut(s) 131, 869, 1079, 1971
MslI CAYNNNNRTG 1 cut(s) 1599
MspA1I CMGCKG 3 cut(s) 560, 971, 1343
MspI CCGG 2 cut(s) 116, 1569
MspR9I CCNGG 1 cut(s) 1569
MvnI CGCG 4 cut(s) 407, 560, 881, 2042
NciI CCSGG 1 cut(s) 1569
NcoI CCATGG 2 cut(s) 29, 1022
NlaIII CATG 7 cut(s) 33, 243, 1026, 1288, 1359, 1414, 1959
NlaIV GGNNCC 1 cut(s) 1909
NmeAIII GCCGAG 3 cut(s) 524, 1298, 1673
NmuCI GTSAC 1 cut(s) 412
NspI RCATGY 1 cut(s) 1359
PaeI GCATGC 1 cut(s) 1359
PdmI GAANNNNTTC 1 cut(s) 255
PkrI GCNGC 6 cut(s) 27, 36, 550, 973, 1342, 1987
PleI GAGTC 2 cut(s) 536, 1960
PpsI GAGTC 2 cut(s) 536, 1960
PpuMI RGGWCCY 1 cut(s) 155
PshAI GACNNNNGTC 2 cut(s) 838, 1301
Psp5II RGGWCCY 1 cut(s) 155
PspN4I GGNNCC 1 cut(s) 1909
PspPI GGNCC 2 cut(s) 155, 833
PspPPI RGGWCCY 1 cut(s) 155
PstNI CAGNNNCTG 1 cut(s) 1922
PsuI RGATCY 3 cut(s) 94, 173, 1907
PvuII CAGCTG 1 cut(s) 1343
RsaI GTAC 2 cut(s) 114, 404
RsaNI GTAC 2 cut(s) 113, 403
RseI CAYNNNNRTG 1 cut(s) 1599
SacII CCGCGG 1 cut(s) 561
SaqAI TTAA 4 cut(s) 131, 869, 1079, 1971
SatI GCNGC 6 cut(s) 26, 35, 549, 972, 1341, 1986
Sau96I GGNCC 2 cut(s) 155, 833
SchI GAGTC 2 cut(s) 536, 1961
ScrFI CCNGG 1 cut(s) 1569
SfaNI GCATC 2 cut(s) 946, 1001
Sfr303I CCGCGG 1 cut(s) 561
SgrBI CCGCGG 1 cut(s) 561
SinI GGWCC 2 cut(s) 155, 833
SmiMI CAYNNNNRTG 1 cut(s) 1599
SmlI CTYRAG 3 cut(s) 83, 512, 736
SmoI CTYRAG 3 cut(s) 83, 512, 736
SphI GCATGC 1 cut(s) 1359
Sse9I AATT 8 cut(s) 199, 428, 800, 1499, 1671, 1856, 1975, 1995
StyD4I CCNGG 1 cut(s) 1567
StyI CCWWGG 4 cut(s) 29, 207, 305, 1022
TaaI ACNGT 8 cut(s) 136, 293, 875, 1232, 1531, 1561, 1873, 2057
TaiI ACGT 4 cut(s) 939, 1490, 1737, 1851
TaqI TCGA 8 cut(s) 432, 771, 1431, 1518, 1626, 1653, 1860, 2067
TaqII GACCGA 1 cut(s) 431
TasI AATT 8 cut(s) 199, 428, 800, 1499, 1671, 1856, 1975, 1995
TauI GCSGC 3 cut(s) 28, 37, 1988
Tru1I TTAA 4 cut(s) 131, 869, 1079, 1971
Tru9I TTAA 4 cut(s) 131, 869, 1079, 1971
TscAI CASTG 2 cut(s) 1002, 1366
TseFI GTSAC 1 cut(s) 412
TseI GCWGC 3 cut(s) 548, 971, 1340
Tsp45I GTSAC 1 cut(s) 412
TspGWI ACGGA 1 cut(s) 61
TspRI CASTG 2 cut(s) 1002, 1366
VpaK11BI GGWCC 2 cut(s) 155, 833
XapI RAATTY 5 cut(s) 199, 428, 1499, 1856, 1975
XceI RCATGY 1 cut(s) 1359
XcmI CCANNNNNNNNNTGG 1 cut(s) 214
XmnI GAANNNNTTC 1 cut(s) 255
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.