Rw3G018740

N-terminal C2 in EEIG1 and EHBP1 proteins

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0008328
Physical Location & Seq
Reverse (-)
20993634 .. 20997762
4129 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G018740.1

Sequence Viewer

Length: 2352 bp
ATGGTGGTGAAGATGATGAAGTGGCGGCCGTGGCCGCCGCTGAATACGAGGAAGTACGAGGTGAGGCTGGTGGTGCGGCGGCTGGAGGGGTGGGATCCGGTGCGGGAGGAGGAGGAGGAGGAGGATTCCGGCGAGAGTAAGCTGACCGTTGAGGTTAGGTGGAAGGGGACCAGTAGGGGGAAAGTGGGGCCCCTGAGCTCGCTACGGCGGGCGGTGGTGAAGAGGAACTTTACGAAGGAGGTGGAGGCGGGTCAAGACGGCGTCGTTCAGTGGGACGAGGAGTTTCACAGCGCTTGCGCTTTTAATTCGTACAAGGACAATGTGTTTCATCCCTGGGAGATCGCCTTCACTGTGTTTGATGGTCTGAATCAAGGGCCAAAAATTAAAGCTCCTGTTGTGGGAACAGCATCGGTGAACCTTGCTGAATTTGTTGCCGCAGCTGAAGAAAATGAGCTTCAGTTGAACATTCCCCTCACCACATCTGGCGGTGCTGCTGAGCCCTGTCCCTCACTTTGTATATCGCTTGGTTTATTGGAATTGAGAACGGCGCAAGAAATGACAGAGCCGGTGCAGGGATCAATTATTCCTGCTCCATCACCAGCCCAATCAAGAGAAACTGTATCTGCAGAAAAGGATGAGCTTTCTGCTCTTAAAGCCGGTCTTAGGAAAGTTAAGATTTTTACCGAGTATGTGTCCACCAGAAAAGCGAAAAAACCGTGCCGTGAAGAGGACGGCAGTGAAGGTAGGTGCTCTGCCAGAAGTGAGGACGGTGAGTACAACTATCCATTTGACTCTGATTCACTTGACGATTGTGAAGAAGGTGAATCAGATGATGTCAAAGATGATTCCAGTGTCAGGAAGTCATTCAGTTATGGCACACTGGCCCATGCAAATTATGCTGGAAGAACAATATACTCCAATATGAGAATCAATGGCGAAGGTGAGGATTGGGTTTATTACAGCAATCGCAAATCAGATGTGGGGTGCTCACAGGCCGAGGACTCATCTGTATCAGTCTCTGAGCCATCTGCTAGTTCAAAGCGGGGCTTACTACCCTGGAGGAAGAGAAAGCTGAGCTTCATTCGGTCTCCTAAAGCTAAAGGAGAACCATTGTTAAAGAAGGCTTATGGTGAAGAAGGTGGTGATGACATTGATTTTGATCGTCGGCAGCTTAGCTCTGATGAATGTCTATCTCTCGGGTGGCAGAAGACAGAGGAGGATTCATCTGCTAATCGGTCATCAGTTTCAGAATTTGGGGATGATAATTTCGCCATAGGCTGTTGGGAGAACAAGGAAGTGACGAACCGTGATGAACACATGAAGCTTCAAACACAGATCTTCTTTGCTTCTATTGATCAGCGGAGTGAGCGGGCAGCGGGTGAGAGTGCATGTACGGCTCTTGTTGCAGTGATTGCGGATTGGTTTCAGAATAACCCTGACCTCATGCCCATAAAGTCCCAGTTTGATAGTCTGATTCGAGAAGGATCGTTAGAGTGGAGGAATCTTTGTGAAAATGAGACATATATGGAGAGATTCCCAGACAAGCACTTTGATCTTGAAACTGTCCTCCAAGCCAAAATACGTCCTCTTTCTGTAGTTCCGGGGAAATCTATCATTGGGTTTTTCCATCCTGAGGGGGTGGACGAGGGACGATTTGATTTTCTACATGGTGCATTGTCCTTTGATAACATTTGGGATGAGATTAGCCGTGCTGCATCCGAATGTTCAAGCAATGGGGAACCTCAAGTTTATATTGTTAGTTGGAATGACCATTTCTTCATCCTCAAGGTTGAACCAGAAGCTTACTACATCATTGATACATTAGGGGAGAGGCTCTATGAAGGATGTGACCAGGCCTATATTCTTAAATTTGACAGCAACACGACAATTTACAAAAAGCAAAATGTTGCACAATCTGATGATAAAACAGCCGGTGATCAGCCAATTGTGGCAGGAGCTGGTGAACCCAAGAACCAGCAAATGCAGCCGGTCAATGGGAAAGAGGAGGGGTCTATAGTGGAGGCAGAGGTAACCAATCCAGAGGAGCAGAAGGAGGAAGAGGAGGTCGTGTGTCGAGGGAAGGAGGCCTGCAAAGAGTACATAAAGAGCTTTCTGGCTGCTATTCCAATAAGGGAATTGCAGGCTGATATCAAGAAAGGACTAATGTCATCCACACTTGTTCATCAACGTTTACAGATTGAATTCAATTTTACCCAGTTCTCGAAACTGCTGCCTACTACTAGTCCACCGGCAGAAGTAACCACAGATGCGTCACAAAGTCCAGCAGCAGAAGTAACCACAGATGCGTCACAAAGTCTCCAACTTTTTACGGCAGAGGTTGTTGCTGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NT-C2

Protein Analysis

783

Amino Acids

87.53

Weight (kDa)

4.79

Isoelectric Point (pI)

51.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NT-C2 PF10358 41 - 147 3.2e-09 N-terminal C2 in EEIG1 and EHBP1 proteins
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1369
AclI AACGTT 1 cut(s) 2188
AclWI GGATC 4 cut(s) 89, 102, 583, 1492
AcoI YGGCCR 2 cut(s) 26, 32
AcsI RAATTY 4 cut(s) 425, 1250, 1868, 2201
AcuI CTGAAG 2 cut(s) 440, 462
AcyI GRCGYC 1 cut(s) 261
AfaI GTAC 5 cut(s) 56, 311, 776, 1393, 2099
AfeI AGCGCT 1 cut(s) 292
AfiI CCNNNNNNNGG 8 cut(s) 177, 398, 572, 663, 727, 855, 1633, 1994
AgsI TTSAA 8 cut(s) 463, 1038, 1328, 1559, 1728, 1793, 2201, 2206
AhlI ACTAGT 1 cut(s) 2240
AjnI CCWGG 3 cut(s) 332, 1055, 1851
Alw21I GWGCWC 3 cut(s) 200, 752, 989
Alw26I GTCTC 4 cut(s) 1021, 1092, 1511, 2321
AlwI GGATC 4 cut(s) 89, 102, 583, 1492
AlwNI CAGNNNCTG 2 cut(s) 1019, 1958
Ama87I CYCGRG 1 cut(s) 1196
Aor51HI AGCGCT 1 cut(s) 292
AoxI GGCC 8 cut(s) 26, 32, 188, 374, 882, 993, 1854, 2085
ApaI GGGCCC 1 cut(s) 192
ApeKI GCWGC 9 cut(s) 437, 491, 1168, 1373, 1712, 1984, 2117, 2230, 2285
ApoI RAATTY 4 cut(s) 425, 1250, 1868, 2201
ArsI GACNNNNNNTTYG 4 cut(s) 1139, 1171, 1532, 1564
Asp700I GAANNNNTTC 1 cut(s) 863
AspLEI GCGC 3 cut(s) 293, 299, 550
AspS9I GGNCC 5 cut(s) 168, 188, 189, 374, 883
AsuC2I CCSGG 1 cut(s) 1602
AvaI CYCGRG 1 cut(s) 1196
AvaII GGWCC 1 cut(s) 168
AxyI CCTNAGG 1 cut(s) 1632
BaeGI GKGCMC 1 cut(s) 192
BamHI GGATCC 1 cut(s) 94
BanII GRGCYC 3 cut(s) 192, 200, 501
BbsI GAAGAC 1 cut(s) 1214
Bbv12I GWGCWC 3 cut(s) 200, 752, 989
BbvI GCAGC 9 cut(s) 449, 478, 1180, 1385, 1699, 1996, 2104, 2217, 2297
BccI CCATC 4 cut(s) 353, 601, 1033, 1635
BceAI ACGGC 9 cut(s) 13, 221, 274, 561, 705, 748, 1410, 1692, 2346
BcgI CGANNNNNNTGC 2 cut(s) 2212, 2246
BciT130I CCWGG 3 cut(s) 334, 1057, 1853
BclI TGATCA 2 cut(s) 1354, 1936
BcnI CCSGG 1 cut(s) 1602
BcoDI GTCTC 4 cut(s) 1021, 1092, 1511, 2321
BcuI ACTAGT 1 cut(s) 2240
BfaI CTAG 2 cut(s) 1032, 2241
BfmI CTRYAG 3 cut(s) 624, 1593, 2013
BfoI RGCGCY 1 cut(s) 294
BglII AGATCT 1 cut(s) 1335
BlpI GCTNAGC 3 cut(s) 495, 1073, 1172
Bme1390I CCNGG 4 cut(s) 334, 1057, 1602, 1853
Bme18I GGWCC 1 cut(s) 168
BmeT110I CYCGRG 1 cut(s) 1196
BmgT120I GGNCC 5 cut(s) 168, 188, 189, 374, 883
BmiI GGNNCC 6 cut(s) 96, 169, 189, 190, 191, 1740
BmrFI CCNGG 4 cut(s) 334, 1057, 1602, 1853
BmrI ACTGGG 2 cut(s) 1453, 2209
BmsI GCATC 4 cut(s) 416, 1724, 2257, 2293
BmuI ACTGGG 2 cut(s) 1453, 2209
BoxI GACNNNNGTC 1 cut(s) 2164
BpiI GAAGAC 1 cut(s) 1214
BpmI CTGGAG 2 cut(s) 104, 1078
Bpu10I CCTNAGC 1 cut(s) 194
Bpu1102I GCTNAGC 3 cut(s) 495, 1073, 1172
BpuEI CTTGAG 2 cut(s) 1728, 1769
BpuMI CCSGG 1 cut(s) 1602
BsaBI GATNNNNATC 1 cut(s) 1158
BsaHI GRCGYC 1 cut(s) 261
BsaI GGTCTC 1 cut(s) 1092
BsaJI CCNNGG 6 cut(s) 29, 332, 333, 996, 1055, 1601
BsaWI WCCGGW 1 cut(s) 97
BsaXI ACNNNNNCTCC 4 cut(s) 2054, 2084, 2301, 2331
Bsc4I CCNNNNNNNGG 8 cut(s) 177, 398, 572, 663, 727, 855, 1633, 1994
Bse118I RCCGGY 5 cut(s) 565, 656, 1931, 1987, 2248
Bse1I ACTGG 5 cut(s) 171, 849, 885, 1459, 2215
Bse21I CCTNAGG 1 cut(s) 1632
Bse3DI GCAATG 1 cut(s) 1738
Bse8I GATNNNNATC 1 cut(s) 1158
BseBI CCWGG 3 cut(s) 334, 1057, 1853
BseDI CCNNGG 6 cut(s) 29, 332, 333, 996, 1055, 1601
BseGI GGATG 9 cut(s) 328, 640, 1264, 1627, 1702, 1715, 1779, 1850, 2168
BseJI GATNNNNATC 1 cut(s) 1158
BseLI CCNNNNNNNGG 8 cut(s) 177, 398, 572, 663, 727, 855, 1633, 1994
BseMI GCAATG 1 cut(s) 1738
BseMII CTCAG 5 cut(s) 185, 486, 1011, 1064, 1623
BseNI ACTGG 5 cut(s) 171, 849, 885, 1459, 2215
BseSI GKGCMC 1 cut(s) 192
BseX3I CGGCCG 1 cut(s) 26
BseXI GCAGC 9 cut(s) 449, 478, 1180, 1385, 1699, 1996, 2104, 2217, 2297
BsgI GTGCAG 1 cut(s) 590
Bsh1285I CGRYCG 1 cut(s) 29
BshFI GGCC 8 cut(s) 28, 34, 190, 376, 884, 995, 1856, 2087
BsiEI CGRYCG 1 cut(s) 29
BsiHKAI GWGCWC 3 cut(s) 200, 752, 989
BsiHKCI CYCGRG 1 cut(s) 1196
BsiSI CCGG 8 cut(s) 98, 129, 566, 657, 1601, 1932, 1988, 2249
BslFI GGGAC 5 cut(s) 181, 287, 489, 1441, 1662
BslI CCNNNNNNNGG 8 cut(s) 177, 398, 572, 663, 727, 855, 1633, 1994
BsmAI GTCTC 4 cut(s) 1021, 1092, 1511, 2321
BsmFI GGGAC 5 cut(s) 181, 287, 489, 1441, 1662
BsnI GGCC 8 cut(s) 28, 34, 190, 376, 884, 995, 1856, 2087
Bso31I GGTCTC 1 cut(s) 1092
BsoBI CYCGRG 1 cut(s) 1196
Bsp120I GGGCCC 1 cut(s) 188
Bsp1286I GDGCHC 5 cut(s) 192, 200, 501, 752, 989
Bsp143I GATC 9 cut(s) 94, 339, 575, 1159, 1335, 1354, 1484, 1552, 1936
Bsp1720I GCTNAGC 3 cut(s) 495, 1073, 1172
BspANI GGCC 8 cut(s) 28, 34, 190, 376, 884, 995, 1856, 2087
BspCNI CTCAG 5 cut(s) 186, 487, 1012, 1065, 1624
BspLI GGNNCC 6 cut(s) 96, 169, 189, 190, 191, 1740
BspMAI CTGCAG 1 cut(s) 628
BspPI GGATC 4 cut(s) 89, 102, 583, 1492
BspTNI GGTCTC 1 cut(s) 1092
BsrBI CCGCTC 1 cut(s) 1369
BsrDI GCAATG 1 cut(s) 1738
BsrFI RCCGGY 5 cut(s) 565, 656, 1931, 1987, 2248
BsrI ACTGG 5 cut(s) 171, 849, 885, 1459, 2215
BssAI RCCGGY 5 cut(s) 565, 656, 1931, 1987, 2248
BssECI CCNNGG 6 cut(s) 29, 332, 333, 996, 1055, 1601
BssMI GATC 9 cut(s) 94, 339, 575, 1159, 1335, 1354, 1484, 1552, 1936
BssNI GRCGYC 1 cut(s) 261
Bst2UI CCWGG 3 cut(s) 334, 1057, 1853
Bst4CI ACNGT 7 cut(s) 148, 352, 619, 717, 770, 1307, 1564
Bst6I CTCTTC 4 cut(s) 215, 720, 1058, 2052
BstACI GRCGYC 1 cut(s) 261
BstAPI GCANNNNNTGC 2 cut(s) 896, 1412
BstC8I GCNNGC 6 cut(s) 200, 210, 295, 1371, 2089, 2142
BstDEI CTNAG 7 cut(s) 194, 495, 662, 1020, 1073, 1172, 1632
BstDSI CCRYGG 1 cut(s) 29
BstEII GGTNACC 1 cut(s) 2029
BstF5I GGATG 9 cut(s) 328, 640, 1264, 1627, 1702, 1715, 1779, 1850, 2168
BstH2I RGCGCY 1 cut(s) 294
BstHHI GCGC 3 cut(s) 293, 299, 550
BstKTI GATC 9 cut(s) 97, 342, 578, 1162, 1338, 1357, 1487, 1555, 1939
BstMAI GTCTC 4 cut(s) 1021, 1092, 1511, 2321
BstMBI GATC 9 cut(s) 94, 339, 575, 1159, 1335, 1354, 1484, 1552, 1936
BstMCI CGRYCG 1 cut(s) 29
BstNI CCWGG 3 cut(s) 334, 1057, 1853
BstNSI RCATGY 1 cut(s) 1392
BstPAI GACNNNNGTC 1 cut(s) 2164
BstPI GGTNACC 1 cut(s) 2029
BstSCI CCNGG 4 cut(s) 332, 1055, 1600, 1851
BstSFI CTRYAG 3 cut(s) 624, 1593, 2013
BstSLI GKGCMC 1 cut(s) 192
BstV1I GCAGC 9 cut(s) 449, 478, 1180, 1385, 1699, 1996, 2104, 2217, 2297
BstV2I GAAGAC 1 cut(s) 1214
BstX2I RGATCY 2 cut(s) 94, 1335
BstYI RGATCY 2 cut(s) 94, 1335
BstZI CGGCCG 1 cut(s) 26
Bsu36I CCTNAGG 1 cut(s) 1632
BsuRI GGCC 8 cut(s) 28, 34, 190, 376, 884, 995, 1856, 2087
BtgI CCRYGG 1 cut(s) 29
BtsCI GGATG 9 cut(s) 328, 640, 1264, 1627, 1702, 1715, 1779, 1850, 2168
BtsI GCAGTG 2 cut(s) 742, 1413
BtsIMutI CAGTG 6 cut(s) 275, 348, 742, 856, 878, 1413
Cac8I GCNNGC 6 cut(s) 200, 210, 295, 1371, 2089, 2142
CaiI CAGNNNCTG 2 cut(s) 1019, 1958
CfoI GCGC 3 cut(s) 293, 299, 550
Cfr10I RCCGGY 5 cut(s) 565, 656, 1931, 1987, 2248
Cfr13I GGNCC 5 cut(s) 168, 188, 189, 374, 883
CseI GACGC 3 cut(s) 250, 2259, 2295
Csp6I GTAC 5 cut(s) 55, 310, 775, 1392, 2098
CviAII CATG 5 cut(s) 887, 1318, 1389, 1444, 1667
CviQI GTAC 5 cut(s) 55, 310, 775, 1392, 2098
DdeI CTNAG 7 cut(s) 194, 495, 662, 1020, 1073, 1172, 1632
DpnI GATC 9 cut(s) 96, 341, 577, 1161, 1337, 1356, 1486, 1554, 1938
DpnII GATC 9 cut(s) 94, 339, 575, 1159, 1335, 1354, 1484, 1552, 1936
EaeI YGGCCR 2 cut(s) 26, 32
EagI CGGCCG 1 cut(s) 26
Eam1104I CTCTTC 4 cut(s) 215, 720, 1058, 2052
EarI CTCTTC 4 cut(s) 215, 720, 1058, 2052
Ecl136II GAGCTC 1 cut(s) 198
EclXI CGGCCG 1 cut(s) 26
Eco147I AGGCCT 2 cut(s) 1856, 2087
Eco24I GRGCYC 3 cut(s) 192, 200, 501
Eco31I GGTCTC 1 cut(s) 1092
Eco32I GATATC 1 cut(s) 2149
Eco47I GGWCC 1 cut(s) 168
Eco47III AGCGCT 1 cut(s) 292
Eco52I CGGCCG 1 cut(s) 26
Eco53kI GAGCTC 1 cut(s) 198
Eco57I CTGAAG 2 cut(s) 440, 462
Eco81I CCTNAGG 1 cut(s) 1632
Eco88I CYCGRG 1 cut(s) 1196
Eco91I GGTNACC 1 cut(s) 2029
EcoICRI GAGCTC 1 cut(s) 198
EcoO109I RGGNCCY 2 cut(s) 188, 189
EcoO65I GGTNACC 1 cut(s) 2029
EcoRI GAATTC 1 cut(s) 2201
EcoRII CCWGG 3 cut(s) 332, 1055, 1851
EcoRV GATATC 1 cut(s) 2149
EcoT38I GRGCYC 3 cut(s) 192, 200, 501
FaeI CATG 5 cut(s) 890, 1321, 1392, 1447, 1670
FalI AAGNNNNNCTT 8 cut(s) 212, 244, 645, 677, 1031, 1063, 1061, 1093
FaqI GGGAC 5 cut(s) 181, 287, 489, 1441, 1662
FatI CATG 5 cut(s) 886, 1317, 1388, 1443, 1666
FauI CCCGC 6 cut(s) 96, 201, 241, 1035, 1362, 1369
FbaI TGATCA 2 cut(s) 1354, 1936
FokI GGATG 9 cut(s) 315, 647, 1271, 1614, 1702, 1709, 1766, 1857, 2155
FriOI GRGCYC 3 cut(s) 192, 200, 501
FspBI CTAG 2 cut(s) 1032, 2241
GlaI GCGC 3 cut(s) 292, 298, 549
GsuI CTGGAG 2 cut(s) 104, 1078
HaeII RGCGCY 1 cut(s) 294
HaeIII GGCC 8 cut(s) 28, 34, 190, 376, 884, 995, 1856, 2087
HapII CCGG 8 cut(s) 98, 129, 566, 657, 1601, 1932, 1988, 2249
HgaI GACGC 3 cut(s) 250, 2259, 2295
HhaI GCGC 3 cut(s) 293, 299, 550
Hin1I GRCGYC 1 cut(s) 261
Hin1II CATG 5 cut(s) 890, 1321, 1392, 1447, 1670
Hin6I GCGC 3 cut(s) 291, 297, 548
HinP1I GCGC 3 cut(s) 291, 297, 548
HindIII AAGCTT 2 cut(s) 1322, 1800
HpaII CCGG 8 cut(s) 98, 129, 566, 657, 1601, 1932, 1988, 2249
Hpy166II GTNNAC 6 cut(s) 415, 696, 1642, 1964, 2192, 2246
Hpy188III TCNNGA 9 cut(s) 254, 609, 856, 1478, 1556, 1631, 2039, 2152, 2221
Hpy8I GTNNAC 6 cut(s) 415, 696, 1642, 1964, 2192, 2246
Hpy99I CGWCG 2 cut(s) 266, 1167
HpyCH4III ACNGT 7 cut(s) 148, 352, 619, 717, 770, 1307, 1564
HpyCH4IV ACGT 2 cut(s) 1582, 2188
HpyF3I CTNAG 7 cut(s) 194, 495, 662, 1020, 1073, 1172, 1632
HpySE526I ACGT 2 cut(s) 1582, 2188
Hsp92I GRCGYC 1 cut(s) 261
Hsp92II CATG 5 cut(s) 890, 1321, 1392, 1447, 1670
HspAI GCGC 3 cut(s) 291, 297, 548
Ksp22I TGATCA 2 cut(s) 1354, 1936
Kzo9I GATC 9 cut(s) 94, 339, 575, 1159, 1335, 1354, 1484, 1552, 1936
LmnI GCTCC 4 cut(s) 394, 595, 1955, 2044
Lsp1109I GCAGC 9 cut(s) 449, 478, 1180, 1385, 1699, 1996, 2104, 2217, 2297
LweI GCATC 4 cut(s) 416, 1724, 2257, 2293
MaeI CTAG 2 cut(s) 1032, 2241
MaeII ACGT 2 cut(s) 1582, 2188
MaeIII GTNAC 7 cut(s) 1297, 1847, 2029, 2257, 2271, 2293, 2307
MalI GATC 9 cut(s) 96, 341, 577, 1161, 1337, 1356, 1486, 1554, 1938
MbiI CCGCTC 1 cut(s) 1369
MboI GATC 9 cut(s) 94, 339, 575, 1159, 1335, 1354, 1484, 1552, 1936
MfeI CAATTG 1 cut(s) 1944
MflI RGATCY 2 cut(s) 94, 1335
MhlI GDGCHC 5 cut(s) 192, 200, 501, 752, 989
MlyI GAGTC 2 cut(s) 785, 995
MmeI TCCRAC 2 cut(s) 1742, 2344
MroXI GAANNNNTTC 1 cut(s) 863
MseI TTAA 6 cut(s) 303, 384, 651, 672, 1115, 1866
MslI CAYNNNNRTG 1 cut(s) 1720
MspA1I CMGCKG 4 cut(s) 40, 440, 1360, 1376
MspI CCGG 8 cut(s) 98, 129, 566, 657, 1601, 1932, 1988, 2249
MspR9I CCNGG 4 cut(s) 334, 1057, 1602, 1853
MunI CAATTG 1 cut(s) 1944
MvaI CCWGG 3 cut(s) 334, 1057, 1853
NciI CCSGG 1 cut(s) 1602
NdeII GATC 9 cut(s) 94, 339, 575, 1159, 1335, 1354, 1484, 1552, 1936
NlaIII CATG 5 cut(s) 890, 1321, 1392, 1447, 1670
NlaIV GGNNCC 6 cut(s) 96, 169, 189, 190, 191, 1740
NmeAIII GCCGAG 1 cut(s) 1021
NmuCI GTSAC 4 cut(s) 1297, 1847, 2271, 2307
NspI RCATGY 1 cut(s) 1392
PasI CCCWGGG 1 cut(s) 333
PceI AGGCCT 2 cut(s) 1856, 2087
PdmI GAANNNNTTC 1 cut(s) 863
PflFI GACNNNGTC 1 cut(s) 260
PleI GAGTC 2 cut(s) 785, 995
PpsI GAGTC 2 cut(s) 785, 995
PshAI GACNNNNGTC 1 cut(s) 2164
Psp124BI GAGCTC 1 cut(s) 200
Psp1406I AACGTT 1 cut(s) 2188
Psp6I CCWGG 3 cut(s) 332, 1055, 1851
PspEI GGTNACC 1 cut(s) 2029
PspGI CCWGG 3 cut(s) 332, 1055, 1851
PspN4I GGNNCC 6 cut(s) 96, 169, 189, 190, 191, 1740
PspOMI GGGCCC 1 cut(s) 188
PspPI GGNCC 5 cut(s) 168, 188, 189, 374, 883
PstI CTGCAG 1 cut(s) 628
PstNI CAGNNNCTG 2 cut(s) 1019, 1958
PsuI RGATCY 2 cut(s) 94, 1335
PsyI GACNNNGTC 1 cut(s) 260
PvuII CAGCTG 1 cut(s) 440
RsaI GTAC 5 cut(s) 56, 311, 776, 1393, 2099
RsaNI GTAC 5 cut(s) 55, 310, 775, 1392, 2098
RseI CAYNNNNRTG 1 cut(s) 1720
SacI GAGCTC 1 cut(s) 200
SaqAI TTAA 6 cut(s) 303, 384, 651, 672, 1115, 1866
Sau3AI GATC 9 cut(s) 94, 339, 575, 1159, 1335, 1354, 1484, 1552, 1936
Sau96I GGNCC 5 cut(s) 168, 188, 189, 374, 883
SchI GAGTC 2 cut(s) 785, 995
ScrFI CCNGG 4 cut(s) 334, 1057, 1602, 1853
SduI GDGCHC 5 cut(s) 192, 200, 501, 752, 989
SfaNI GCATC 4 cut(s) 416, 1724, 2257, 2293
SfcI CTRYAG 3 cut(s) 624, 1593, 2013
SinI GGWCC 1 cut(s) 168
SmiMI CAYNNNNRTG 1 cut(s) 1720
SmlI CTYRAG 2 cut(s) 1743, 1784
SmoI CTYRAG 2 cut(s) 1743, 1784
SpeI ACTAGT 1 cut(s) 2240
SseBI AGGCCT 2 cut(s) 1856, 2087
SspMI CTAG 2 cut(s) 1032, 2241
SstI GAGCTC 1 cut(s) 200
StuI AGGCCT 2 cut(s) 1856, 2087
StyD4I CCNGG 4 cut(s) 332, 1055, 1600, 1851
TaaI ACNGT 7 cut(s) 148, 352, 619, 717, 770, 1307, 1564
TaiI ACGT 2 cut(s) 1585, 2191
TaqI TCGA 3 cut(s) 1477, 2074, 2222
TaqII GACCGA 2 cut(s) 1074, 1224
TatI WGTACW 2 cut(s) 774, 2097
TauI GCSGC 6 cut(s) 28, 37, 40, 79, 82, 437
Tru1I TTAA 6 cut(s) 303, 384, 651, 672, 1115, 1866
Tru9I TTAA 6 cut(s) 303, 384, 651, 672, 1115, 1866
TscAI CASTG 6 cut(s) 275, 355, 742, 856, 885, 1413
TseFI GTSAC 4 cut(s) 1297, 1847, 2271, 2307
TseI GCWGC 9 cut(s) 437, 491, 1168, 1373, 1712, 1984, 2117, 2230, 2285
Tsp45I GTSAC 4 cut(s) 1297, 1847, 2271, 2307
TspRI CASTG 6 cut(s) 275, 355, 742, 856, 885, 1413
Tth111I GACNNNGTC 1 cut(s) 260
VpaK11BI GGWCC 1 cut(s) 168
XapI RAATTY 4 cut(s) 425, 1250, 1868, 2201
XceI RCATGY 1 cut(s) 1392
XmnI GAANNNNTTC 1 cut(s) 863
XspI CTAG 2 cut(s) 1032, 2241
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.