Rroxscaffold_6G00405230

N-terminal C2 in EEIG1 and EHBP1 proteins

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0008328
Physical Location & Seq
Forward (+)
27640822 .. 27644863
4042 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00405230.1

Sequence Viewer

Length: 2358 bp
ATGGTGGTGAAGATGATGAAGTGGCGGCCGTGGCCGCCGCTGAATACGAGGAAGTACGAGGTGAGGCTGGTGGTGCGGCGGCTGGAGGGGTGGGATCTGGTGCGGCGGGAGGAGGAGGAGGAGGAGGATTCCGGGGAGACTAAGTTGACCGTTGAGATTAGGTGGAAGGGGACCAGTAGGGGGAAAGTGGGGCCCCTGAGCTCGCTACGGCGGGCCGGGTTGAAGAGGAACTTTACGAAGGAGGTGGAGGCGGGTCAAGACGGCGTCGTTCAGTGGGACGAGGAGTTTCACAGCGCTTGCGCTTTTAATTCGTATAAGGACAATGTGTTTCATCCTTGGGAGATCGCCTTCACTGTGTTTGATGGTCTGAATCAAGGGCCAAAAATTAAAGCTCCTGTTGTGGGAACAGCATCAGTGAACCTTGCTGAATTTGTTGCTGCAGCTGAAGAAAACGAGCTTCAGTTAAACATTCCCCTCACCACATCTGGCGGTGCTGCTGAGCCCTGTCCCTCACTTTGTATATCGCTTGGCTTATTGGAATTGAGAGCGGCTCAAGAAATGACAGAGCCGGTGCAGGGATCAATTATTCCTGCTCCATCACCAGCCCAATCAAGAGAAACTGTTACTGCAGAAAAGGATGAGCTTTCTGCTCTTAAAGCCGGTCTTAGGAAAGTAAAGATTTTTACCGAGTATGTGTCCACCAGAAAAGCGAAAAAACCCTGCCGTGAAGAGGACGGCAGTGAAGGTAGGTGCTCTGCCAGAAGTGAGGATGGTGAGTACAACTATCCATTTGACTCTGATTCACTTGACGATTGTGAAGAAGGTGAATCAGATGATGTCAAAGATGATTCCAGTGTCAGGAAGTCATTCAGTTATGGCACACTGGCCCATGCAAATTATGCTGGAAGAACAATATACTCCAATATGAGAATCAATGGTGAAGGTGAGGATTGGGTTTATTACAGCAATCGCAAAACAGATGTGGGGTGCTCACAGGCCGAGGACTCATCTATATCAGTCTCTGAGCCATCTGCTAGTTCAAAGCGGGGCTTACTACCTTGGAGGAAGAGAAAGCTGAGCTTCATTCGGTCTCCTAAAGCTAAAGGAGAACCATTGTTAAAGAAGGCTTATGGTGAAGAAGGTGGTGATGACATTGATTTTGATCGTCGGCAGCTTAGCTCTGATGAATGTCTATCTCTTGGGTGGCAGAAGACAGAGGAGGATTCATCTGCTAATCGGTCATCAGTTTCAGAATTTGGGGATGATAATTTCGCCATAGGCTGTTGGGAGAACAAGGAAGTGACGAACCGTGATGGACACATGGAGCTTCAAACACAGATCTTCTTTGCTTCTATTGATCAGCGGAGTGAGCGGGCAGCGGGTGAGAGTGCATGTACGGCTCTTGTCGCAGTGATTGCAGATTGGTTTCAGAATAACCCTGACCTCATGCCCATAAAGTCCCAGTTTGATAGTCTGATTCGAGAAGGATCGTTAGAGTGGAGGAATCTTTGTGAAAATGAGACATATATGGAGAGATTCCCAGACAAGCACTTTGATCTTGAAACTGTCCTCCAAGCCAAAATACGTCCTCTTTCTGTAGTTCCGGGGAAATCTATCATTGGGTTTTTCCATCCTGAGGGGGTGGACGAGGGACGATTTGATTTTCTACATGGTGCATTGTCCTTTGATAACATTTGGGATGAGATTAGCCGTGCTGCATCCGAATGTTCAAGCAATGGGGAACCTCAAGTTTATATTGTTAGTTGGAATGACCATTTCTTCATCCTCAAGGTTGAACCAGAAGCTTACTACATCATTGATACATTAGGGGAGAGGCTCTATGAAGGATGCGACCAGGCCTATATTCTTAAATTTGACAGCAACACGACAATTTACAAAAAGCAAAATGTTGCAGATTCATCTGATGATAAAACAGCCAGTGATCAGCCAATTGTGGCAGGAGCTGGTGAACCCAAGAACCAGCAAATGCAGCAGGTCAATGGGAAAGAGGAGGGGTATATAGTAGAGGCAGAGGTAACCAATCCAGGGGAGCAGAAGGAGGAAGAGGAGGTCGTGTGTCGAGGGAAGGAGGCCTGCAAAGAGTACATAAAGAACTTTCTGGCTGCTATTCCAATAAGGGAATTGCAGGCAGATATCAAGAAAGGACTAATGTCATCCACACTTGTTCATCAACGTTTACAGATTGAATTCAATTTTACCCAGTTCTCGAAACTGCTGCCTACTACTAGTCCACCGGCAGAAGTAACCACAGATGCGTTACAAAGTCCAGCAGCAGAAGTAACCACAGATGCGTCACAAAGTCTCCAACTTTTTACGGCAGAGGTTGTTGCTGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NT-C2

Protein Analysis

785

Amino Acids

87.83

Weight (kDa)

4.79

Isoelectric Point (pI)

50.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NT-C2 PF10358 33 - 148 5.6e-09 N-terminal C2 in EEIG1 and EHBP1 proteins
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1984
AccBSI CCGCTC 2 cut(s) 548, 1372
AclI AACGTT 1 cut(s) 2194
AclWI GGATC 3 cut(s) 102, 586, 1495
AcoI YGGCCR 2 cut(s) 26, 32
AcsI RAATTY 4 cut(s) 428, 1253, 1871, 2207
AcuI CTGAAG 2 cut(s) 443, 465
AcyI GRCGYC 1 cut(s) 264
AfaI GTAC 4 cut(s) 56, 779, 1396, 2105
AfeI AGCGCT 1 cut(s) 295
AfiI CCNNNNNNNGG 8 cut(s) 180, 401, 575, 666, 730, 858, 1636, 2046
AgsI TTSAA 8 cut(s) 223, 1041, 1331, 1562, 1731, 1796, 2207, 2212
AhlI ACTAGT 1 cut(s) 2246
AjnI CCWGG 2 cut(s) 1854, 2044
Alw21I GWGCWC 3 cut(s) 203, 755, 992
Alw26I GTCTC 5 cut(s) 131, 1024, 1095, 1514, 2327
AlwI GGATC 3 cut(s) 102, 586, 1495
AlwNI CAGNNNCTG 2 cut(s) 1022, 1964
Aor51HI AGCGCT 1 cut(s) 295
AoxI GGCC 9 cut(s) 26, 32, 191, 213, 377, 885, 996, 1857, 2091
ApaI GGGCCC 1 cut(s) 195
ApoI RAATTY 4 cut(s) 428, 1253, 1871, 2207
ArsI GACNNNNNNTTYG 4 cut(s) 1142, 1174, 1535, 1567
Asp700I GAANNNNTTC 1 cut(s) 866
AspLEI GCGC 2 cut(s) 296, 302
AspS9I GGNCC 6 cut(s) 171, 191, 192, 213, 377, 886
AsuC2I CCSGG 3 cut(s) 133, 217, 1605
AvaII GGWCC 1 cut(s) 171
AxyI CCTNAGG 1 cut(s) 1635
BaeGI GKGCMC 1 cut(s) 195
BanII GRGCYC 3 cut(s) 195, 203, 504
BbsI GAAGAC 1 cut(s) 1217
Bbv12I GWGCWC 3 cut(s) 203, 755, 992
BccI CCATC 6 cut(s) 356, 604, 764, 1036, 1307, 1638
BceAI ACGGC 8 cut(s) 13, 224, 277, 708, 751, 1413, 1695, 2352
BcgI CGANNNNNNTGC 2 cut(s) 2218, 2252
BciT130I CCWGG 2 cut(s) 1856, 2046
BclI TGATCA 2 cut(s) 1357, 1942
BcnI CCSGG 3 cut(s) 133, 217, 1605
BcoDI GTCTC 5 cut(s) 131, 1024, 1095, 1514, 2327
BcuI ACTAGT 1 cut(s) 2246
BfaI CTAG 2 cut(s) 1035, 2247
BfmI CTRYAG 3 cut(s) 438, 627, 1596
BfoI RGCGCY 1 cut(s) 297
BfuAI ACCTGC 1 cut(s) 1984
BglII AGATCT 1 cut(s) 1338
BlpI GCTNAGC 3 cut(s) 498, 1076, 1175
Bme1390I CCNGG 5 cut(s) 133, 217, 1605, 1856, 2046
Bme18I GGWCC 1 cut(s) 171
BmgT120I GGNCC 6 cut(s) 171, 191, 192, 213, 377, 886
BmiI GGNNCC 5 cut(s) 172, 192, 193, 194, 1743
BmrFI CCNGG 5 cut(s) 133, 217, 1605, 1856, 2046
BmrI ACTGGG 2 cut(s) 1456, 2215
BmsI GCATC 5 cut(s) 419, 1727, 1838, 2263, 2299
BmuI ACTGGG 2 cut(s) 1456, 2215
BoxI GACNNNNGTC 1 cut(s) 2170
BpiI GAAGAC 1 cut(s) 1217
BplI GAGNNNNNCTC 2 cut(s) 535, 567
BpmI CTGGAG 1 cut(s) 104
Bpu10I CCTNAGC 1 cut(s) 197
Bpu1102I GCTNAGC 3 cut(s) 498, 1076, 1175
BpuEI CTTGAG 3 cut(s) 537, 1731, 1772
BpuMI CCSGG 3 cut(s) 133, 217, 1605
BsaBI GATNNNNATC 1 cut(s) 1161
BsaHI GRCGYC 1 cut(s) 264
BsaI GGTCTC 1 cut(s) 1095
BsaJI CCNNGG 7 cut(s) 29, 132, 335, 999, 1058, 1604, 2045
BsaXI ACNNNNNCTCC 6 cut(s) 128, 158, 2060, 2090, 2307, 2337
Bsc4I CCNNNNNNNGG 8 cut(s) 180, 401, 575, 666, 730, 858, 1636, 2046
Bse118I RCCGGY 3 cut(s) 568, 659, 2254
Bse1I ACTGG 6 cut(s) 174, 852, 888, 1462, 1938, 2221
Bse21I CCTNAGG 1 cut(s) 1635
Bse3DI GCAATG 1 cut(s) 1741
Bse8I GATNNNNATC 1 cut(s) 1161
BseBI CCWGG 2 cut(s) 1856, 2046
BseDI CCNNGG 7 cut(s) 29, 132, 335, 999, 1058, 1604, 2045
BseJI GATNNNNATC 1 cut(s) 1161
BseLI CCNNNNNNNGG 8 cut(s) 180, 401, 575, 666, 730, 858, 1636, 2046
BseMI GCAATG 1 cut(s) 1741
BseMII CTCAG 5 cut(s) 188, 489, 1014, 1067, 1626
BseNI ACTGG 6 cut(s) 174, 852, 888, 1462, 1938, 2221
BseRI GAGGAG 9 cut(s) 125, 128, 131, 134, 137, 296, 1232, 2024, 2081
BseSI GKGCMC 1 cut(s) 195
BseX3I CGGCCG 1 cut(s) 26
BsgI GTGCAG 1 cut(s) 593
Bsh1285I CGRYCG 1 cut(s) 29
BshFI GGCC 9 cut(s) 28, 34, 193, 215, 379, 887, 998, 1859, 2093
BsiEI CGRYCG 1 cut(s) 29
BsiHKAI GWGCWC 3 cut(s) 203, 755, 992
BsiSI CCGG 6 cut(s) 132, 216, 569, 660, 1604, 2255
BslFI GGGAC 5 cut(s) 184, 290, 492, 1444, 1665
BslI CCNNNNNNNGG 8 cut(s) 180, 401, 575, 666, 730, 858, 1636, 2046
BsmAI GTCTC 5 cut(s) 131, 1024, 1095, 1514, 2327
BsmFI GGGAC 5 cut(s) 184, 290, 492, 1444, 1665
BsnI GGCC 9 cut(s) 28, 34, 193, 215, 379, 887, 998, 1859, 2093
Bso31I GGTCTC 1 cut(s) 1095
Bsp120I GGGCCC 1 cut(s) 191
Bsp1286I GDGCHC 5 cut(s) 195, 203, 504, 755, 992
Bsp143I GATC 9 cut(s) 94, 342, 578, 1162, 1338, 1357, 1487, 1555, 1942
Bsp1720I GCTNAGC 3 cut(s) 498, 1076, 1175
BspANI GGCC 9 cut(s) 28, 34, 193, 215, 379, 887, 998, 1859, 2093
BspCNI CTCAG 5 cut(s) 189, 490, 1015, 1068, 1627
BspLI GGNNCC 5 cut(s) 172, 192, 193, 194, 1743
BspMAI CTGCAG 2 cut(s) 442, 631
BspMI ACCTGC 1 cut(s) 1984
BspPI GGATC 3 cut(s) 102, 586, 1495
BspTNI GGTCTC 1 cut(s) 1095
BsrBI CCGCTC 2 cut(s) 548, 1372
BsrDI GCAATG 1 cut(s) 1741
BsrFI RCCGGY 3 cut(s) 568, 659, 2254
BsrI ACTGG 6 cut(s) 174, 852, 888, 1462, 1938, 2221
BssAI RCCGGY 3 cut(s) 568, 659, 2254
BssECI CCNNGG 7 cut(s) 29, 132, 335, 999, 1058, 1604, 2045
BssMI GATC 9 cut(s) 94, 342, 578, 1162, 1338, 1357, 1487, 1555, 1942
BssNI GRCGYC 1 cut(s) 264
BssT1I CCWWGG 2 cut(s) 335, 1058
Bst2UI CCWGG 2 cut(s) 1856, 2046
Bst4CI ACNGT 5 cut(s) 151, 355, 622, 1310, 1567
Bst6I CTCTTC 4 cut(s) 218, 723, 1061, 2058
BstACI GRCGYC 1 cut(s) 264
BstAPI GCANNNNNTGC 2 cut(s) 899, 1415
BstC8I GCNNGC 6 cut(s) 203, 213, 298, 1374, 2095, 2148
BstDEI CTNAG 8 cut(s) 141, 197, 498, 665, 1023, 1076, 1175, 1635
BstDSI CCRYGG 1 cut(s) 29
BstEII GGTNACC 1 cut(s) 2035
BstH2I RGCGCY 1 cut(s) 297
BstHHI GCGC 2 cut(s) 296, 302
BstKTI GATC 9 cut(s) 97, 345, 581, 1165, 1341, 1360, 1490, 1558, 1945
BstMAI GTCTC 5 cut(s) 131, 1024, 1095, 1514, 2327
BstMBI GATC 9 cut(s) 94, 342, 578, 1162, 1338, 1357, 1487, 1555, 1942
BstMCI CGRYCG 1 cut(s) 29
BstNI CCWGG 2 cut(s) 1856, 2046
BstNSI RCATGY 1 cut(s) 1395
BstPAI GACNNNNGTC 1 cut(s) 2170
BstPI GGTNACC 1 cut(s) 2035
BstSCI CCNGG 5 cut(s) 131, 215, 1603, 1854, 2044
BstSFI CTRYAG 3 cut(s) 438, 627, 1596
BstSLI GKGCMC 1 cut(s) 195
BstV2I GAAGAC 1 cut(s) 1217
BstX2I RGATCY 2 cut(s) 94, 1338
BstYI RGATCY 2 cut(s) 94, 1338
BstZI CGGCCG 1 cut(s) 26
Bsu36I CCTNAGG 1 cut(s) 1635
BsuRI GGCC 9 cut(s) 28, 34, 193, 215, 379, 887, 998, 1859, 2093
BtgI CCRYGG 1 cut(s) 29
BtsI GCAGTG 2 cut(s) 745, 1416
BtsIMutI CAGTG 8 cut(s) 278, 351, 420, 745, 859, 881, 1416, 1945
BveI ACCTGC 1 cut(s) 1984
Cac8I GCNNGC 6 cut(s) 203, 213, 298, 1374, 2095, 2148
CaiI CAGNNNCTG 2 cut(s) 1022, 1964
CfoI GCGC 2 cut(s) 296, 302
Cfr10I RCCGGY 3 cut(s) 568, 659, 2254
Cfr13I GGNCC 6 cut(s) 171, 191, 192, 213, 377, 886
CseI GACGC 2 cut(s) 253, 2301
Csp6I GTAC 4 cut(s) 55, 778, 1395, 2104
CviAII CATG 5 cut(s) 890, 1321, 1392, 1447, 1670
CviQI GTAC 4 cut(s) 55, 778, 1395, 2104
DdeI CTNAG 8 cut(s) 141, 197, 498, 665, 1023, 1076, 1175, 1635
DpnI GATC 9 cut(s) 96, 344, 580, 1164, 1340, 1359, 1489, 1557, 1944
DpnII GATC 9 cut(s) 94, 342, 578, 1162, 1338, 1357, 1487, 1555, 1942
EaeI YGGCCR 2 cut(s) 26, 32
EagI CGGCCG 1 cut(s) 26
Eam1104I CTCTTC 4 cut(s) 218, 723, 1061, 2058
EarI CTCTTC 4 cut(s) 218, 723, 1061, 2058
Ecl136II GAGCTC 1 cut(s) 201
EclXI CGGCCG 1 cut(s) 26
Eco130I CCWWGG 2 cut(s) 335, 1058
Eco147I AGGCCT 2 cut(s) 1859, 2093
Eco24I GRGCYC 3 cut(s) 195, 203, 504
Eco31I GGTCTC 1 cut(s) 1095
Eco32I GATATC 1 cut(s) 2155
Eco47I GGWCC 1 cut(s) 171
Eco47III AGCGCT 1 cut(s) 295
Eco52I CGGCCG 1 cut(s) 26
Eco53kI GAGCTC 1 cut(s) 201
Eco57I CTGAAG 2 cut(s) 443, 465
Eco81I CCTNAGG 1 cut(s) 1635
Eco91I GGTNACC 1 cut(s) 2035
EcoICRI GAGCTC 1 cut(s) 201
EcoO109I RGGNCCY 2 cut(s) 191, 192
EcoO65I GGTNACC 1 cut(s) 2035
EcoRI GAATTC 1 cut(s) 2207
EcoRII CCWGG 2 cut(s) 1854, 2044
EcoRV GATATC 1 cut(s) 2155
EcoT14I CCWWGG 2 cut(s) 335, 1058
EcoT38I GRGCYC 3 cut(s) 195, 203, 504
ErhI CCWWGG 2 cut(s) 335, 1058
FaeI CATG 5 cut(s) 893, 1324, 1395, 1450, 1673
FalI AAGNNNNNCTT 8 cut(s) 215, 247, 648, 680, 1034, 1066, 1064, 1096
FaqI GGGAC 5 cut(s) 184, 290, 492, 1444, 1665
FatI CATG 5 cut(s) 889, 1320, 1391, 1446, 1669
FauI CCCGC 6 cut(s) 99, 204, 244, 1038, 1365, 1372
FbaI TGATCA 2 cut(s) 1357, 1942
FriOI GRGCYC 3 cut(s) 195, 203, 504
FspBI CTAG 2 cut(s) 1035, 2247
GlaI GCGC 2 cut(s) 295, 301
GsuI CTGGAG 1 cut(s) 104
HaeII RGCGCY 1 cut(s) 297
HaeIII GGCC 9 cut(s) 28, 34, 193, 215, 379, 887, 998, 1859, 2093
HapII CCGG 6 cut(s) 132, 216, 569, 660, 1604, 2255
HgaI GACGC 2 cut(s) 253, 2301
HhaI GCGC 2 cut(s) 296, 302
Hin1I GRCGYC 1 cut(s) 264
Hin1II CATG 5 cut(s) 893, 1324, 1395, 1450, 1673
Hin6I GCGC 2 cut(s) 294, 300
HinP1I GCGC 2 cut(s) 294, 300
HincII GTYRAC 1 cut(s) 147
HindII GTYRAC 1 cut(s) 147
HindIII AAGCTT 1 cut(s) 1803
HpaII CCGG 6 cut(s) 132, 216, 569, 660, 1604, 2255
Hpy166II GTNNAC 7 cut(s) 147, 418, 699, 1645, 1970, 2198, 2252
Hpy188III TCNNGA 9 cut(s) 257, 554, 612, 859, 1481, 1559, 1634, 2158, 2227
Hpy8I GTNNAC 7 cut(s) 147, 418, 699, 1645, 1970, 2198, 2252
Hpy99I CGWCG 2 cut(s) 269, 1170
HpyCH4III ACNGT 5 cut(s) 151, 355, 622, 1310, 1567
HpyCH4IV ACGT 2 cut(s) 1585, 2194
HpyF3I CTNAG 8 cut(s) 141, 197, 498, 665, 1023, 1076, 1175, 1635
HpySE526I ACGT 2 cut(s) 1585, 2194
Hsp92I GRCGYC 1 cut(s) 264
Hsp92II CATG 5 cut(s) 893, 1324, 1395, 1450, 1673
HspAI GCGC 2 cut(s) 294, 300
Ksp22I TGATCA 2 cut(s) 1357, 1942
Kzo9I GATC 9 cut(s) 94, 342, 578, 1162, 1338, 1357, 1487, 1555, 1942
LmnI GCTCC 5 cut(s) 397, 598, 1324, 1961, 2050
LweI GCATC 5 cut(s) 419, 1727, 1838, 2263, 2299
MaeI CTAG 2 cut(s) 1035, 2247
MaeII ACGT 2 cut(s) 1585, 2194
MaeIII GTNAC 7 cut(s) 622, 1300, 2035, 2263, 2277, 2299, 2313
MalI GATC 9 cut(s) 96, 344, 580, 1164, 1340, 1359, 1489, 1557, 1944
MbiI CCGCTC 2 cut(s) 548, 1372
MboI GATC 9 cut(s) 94, 342, 578, 1162, 1338, 1357, 1487, 1555, 1942
MfeI CAATTG 1 cut(s) 1950
MflI RGATCY 2 cut(s) 94, 1338
MhlI GDGCHC 5 cut(s) 195, 203, 504, 755, 992
MlyI GAGTC 2 cut(s) 788, 998
MmeI TCCRAC 2 cut(s) 1745, 2350
MroXI GAANNNNTTC 1 cut(s) 866
MseI TTAA 6 cut(s) 306, 387, 464, 654, 1118, 1869
MslI CAYNNNNRTG 1 cut(s) 1723
MspA1I CMGCKG 4 cut(s) 40, 443, 1363, 1379
MspI CCGG 6 cut(s) 132, 216, 569, 660, 1604, 2255
MspR9I CCNGG 5 cut(s) 133, 217, 1605, 1856, 2046
MunI CAATTG 1 cut(s) 1950
MvaI CCWGG 2 cut(s) 1856, 2046
NciI CCSGG 3 cut(s) 133, 217, 1605
NdeII GATC 9 cut(s) 94, 342, 578, 1162, 1338, 1357, 1487, 1555, 1942
NlaIII CATG 5 cut(s) 893, 1324, 1395, 1450, 1673
NlaIV GGNNCC 5 cut(s) 172, 192, 193, 194, 1743
NmeAIII GCCGAG 1 cut(s) 1024
NmuCI GTSAC 2 cut(s) 1300, 2313
NspI RCATGY 1 cut(s) 1395
PceI AGGCCT 2 cut(s) 1859, 2093
PdmI GAANNNNTTC 1 cut(s) 866
PflFI GACNNNGTC 1 cut(s) 263
PleI GAGTC 2 cut(s) 788, 998
PpsI GAGTC 2 cut(s) 788, 998
PshAI GACNNNNGTC 1 cut(s) 2170
Psp124BI GAGCTC 1 cut(s) 203
Psp1406I AACGTT 1 cut(s) 2194
Psp6I CCWGG 2 cut(s) 1854, 2044
PspEI GGTNACC 1 cut(s) 2035
PspGI CCWGG 2 cut(s) 1854, 2044
PspN4I GGNNCC 5 cut(s) 172, 192, 193, 194, 1743
PspOMI GGGCCC 1 cut(s) 191
PspPI GGNCC 6 cut(s) 171, 191, 192, 213, 377, 886
PstI CTGCAG 2 cut(s) 442, 631
PstNI CAGNNNCTG 2 cut(s) 1022, 1964
PsuI RGATCY 2 cut(s) 94, 1338
PsyI GACNNNGTC 1 cut(s) 263
PvuII CAGCTG 1 cut(s) 443
RsaI GTAC 4 cut(s) 56, 779, 1396, 2105
RsaNI GTAC 4 cut(s) 55, 778, 1395, 2104
RseI CAYNNNNRTG 1 cut(s) 1723
SacI GAGCTC 1 cut(s) 203
SaqAI TTAA 6 cut(s) 306, 387, 464, 654, 1118, 1869
Sau3AI GATC 9 cut(s) 94, 342, 578, 1162, 1338, 1357, 1487, 1555, 1942
Sau96I GGNCC 6 cut(s) 171, 191, 192, 213, 377, 886
SchI GAGTC 2 cut(s) 788, 998
ScrFI CCNGG 5 cut(s) 133, 217, 1605, 1856, 2046
SduI GDGCHC 5 cut(s) 195, 203, 504, 755, 992
SfaNI GCATC 5 cut(s) 419, 1727, 1838, 2263, 2299
SfcI CTRYAG 3 cut(s) 438, 627, 1596
SinI GGWCC 1 cut(s) 171
SmiMI CAYNNNNRTG 1 cut(s) 1723
SmlI CTYRAG 3 cut(s) 552, 1746, 1787
SmoI CTYRAG 3 cut(s) 552, 1746, 1787
SpeI ACTAGT 1 cut(s) 2246
SseBI AGGCCT 2 cut(s) 1859, 2093
SspMI CTAG 2 cut(s) 1035, 2247
SstI GAGCTC 1 cut(s) 203
StuI AGGCCT 2 cut(s) 1859, 2093
StyD4I CCNGG 5 cut(s) 131, 215, 1603, 1854, 2044
StyI CCWWGG 2 cut(s) 335, 1058
TaaI ACNGT 5 cut(s) 151, 355, 622, 1310, 1567
TaiI ACGT 2 cut(s) 1588, 2197
TaqI TCGA 3 cut(s) 1480, 2080, 2228
TaqII GACCGA 2 cut(s) 1077, 1227
TatI WGTACW 2 cut(s) 777, 2103
TauI GCSGC 7 cut(s) 28, 37, 40, 79, 82, 106, 551
Tru1I TTAA 6 cut(s) 306, 387, 464, 654, 1118, 1869
Tru9I TTAA 6 cut(s) 306, 387, 464, 654, 1118, 1869
TscAI CASTG 8 cut(s) 278, 358, 420, 745, 859, 888, 1416, 1945
TseFI GTSAC 2 cut(s) 1300, 2313
Tsp45I GTSAC 2 cut(s) 1300, 2313
TspDTI ATGAA 9 cut(s) 32, 320, 1072, 1200, 1215, 1771, 1857, 1908, 2177
TspRI CASTG 8 cut(s) 278, 358, 420, 745, 859, 888, 1416, 1945
Tth111I GACNNNGTC 1 cut(s) 263
VpaK11BI GGWCC 1 cut(s) 171
XapI RAATTY 4 cut(s) 428, 1253, 1871, 2207
XceI RCATGY 1 cut(s) 1395
XmnI GAANNNNTTC 1 cut(s) 866
XspI CTAG 2 cut(s) 1035, 2247
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.