AT3G13880

Pentatricopeptide repeat domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0019600
Physical Location & Seq
Forward (+)
4572075 .. 4574490
2416 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G13880.1

Sequence Viewer

Length: 2247 bp
ATGTTGTTACAGTTCCGAGCAAAGACTTTTTTCAACAACATTGCTCAAGATTCTCTGGTTACTCTTATCACCAAACGAGTTGGATTGGGTTACAGGTTTTTGTCTTCGTTATGCCAACCAAAGAACACGGCTTTAGATTCCGAAGGTTACAAGATACTTTTTCAGACAGCTGCAAAATCAGGCTCCGTGGTACTGGGAAAGCTCGCTCATGGACACATGATCAAGTCCTCCTTGAACCCGTGTCTGTACTTGCTCAACAATCTTCTGAACATGTATTGCAAGTGCCGGGAATTGGGTTTTGCACGCCAGTTGTTCGACAGAATGCCTGAACGAAACATTATTTCTTTTAATTCTTTGATTTCTGGGTACACTCAGATGGGATTTTATGAACAGGCCATGGAATTGTTTCTTGAAGCTAGAGAAGCTAATTTGAAGCTCGATAAGTTCACGTATGCCGGTGCATTGGGCTTTTGTGGAGAAAGGTGTGATCTTGATTTAGGGGAATTGTTGCACGGGTTGGTTGTTGTGAATGGTCTATCTCAGCAAGTGTTTTTGATCAATGTGTTGATTGACATGTATAGTAAGTGTGGAAAGCTTGACCAAGCTATGTCTTTATTTGATAGATGCGATGAAAGGGATCAAGTTTCATGGAATTCTTTGATTTCCGGTTATGTTCGGGTTGGCGCAGCGGAAGAACCGCTAAATCTGTTGGCTAAAATGCATAGAGACGGCCTAAATCTGACTACGTATGCTCTGGGGAGTGTGCTAAAGGCTTGTTGTATTAACCTGAACGAAGGATTTATAGAAAAAGGTATGGCAATTCACTGTTATACAGCAAAACTAGGAATGGAGTTTGATATAGTTGTCCGTACTGCATTGCTTGACATGTATGCCAAAAACGGAAGTTTGAAAGAGGCGATAAAGCTTTTCAGTTTGATGCCTTCGAAGAATGTGGTTACGTATAACGCAATGATATCTGGGTTTCTCCAAATGGATGAAATAACCGATGAAGCTTCTAGTGAAGCCTTTAAGCTCTTCATGGATATGCAAAGACGGGGTTTGGAACCCTCGCCATCGACATTTTCAGTTGTGCTCAAAGCTTGTAGTGCAGCGAAAACCTTGGAATATGGAAGGCAGATTCACGCTCTCATCTGTAAGAACAATTTTCAGTCTGATGAGTTTATTGGGAGCGCTCTAATCGAGCTGTATGCGTTAATGGGTTCAACTGAAGATGGAATGCAATGCTTTGCTTCAACATCAAAGCAAGATATCGCCTCATGGACATCGATGATAGATTGCCATGTCCAAAACGAGCAGCTTGAAAGCGCATTTGATCTGTTCCGACAACTTTTTTCATCCCATATAAGACCAGAAGAGTATACAGTTTCCCTTATGATGAGTGCTTGTGCTGATTTTGCTGCATTAAGCTCAGGAGAGCAGATTCAGGGTTATGCCATAAAGAGTGGAATTGATGCTTTCACCAGTGTTAAGACGTCAAGCATTTCTATGTATGCAAAGTCAGGTAACATGCCGCTTGCTAATCAAGTATTTATCGAGGTCCAAAACCCAGACGTTGCAACATACTCGGCTATGATCTCAAGCCTTGCTCAACACGGTTCTGCTAACGAAGCCTTAAACATCTTTGAATCGATGAAAACCCACGGAATTAAACCGAACCAGCAAGCCTTTCTCGGTGTTCTAATAGCTTGTTGCCACGGAGGATTAGTCACACAAGGACTAAAGTATTTCCAATGCATGAAGAACGATTACAGGATTAACCCAAACGAGAAACATTTCACTTGCCTCGTCGATCTTTTAGGTCGCACGGGAAGATTATCAGATGCTGAGAATCTGATTTTGAGCTCTGGTTTTCAAGACCATCCAGTGACGTGGAGAGCATTACTGAGTTCTTGTAGAGTTTACAAAGACAGCGTAATTGGGAAACGCGTTGCGGAGAGACTGATGGAACTTGAACCCGAGGCCTCTGGCTCATACGTATTGCTCCACAACATTTACAACGATTCTGGAGTCAATTCTTCAGCAGAGGAGGTGAGAGAACTGATGAGAGATCGAGGGGTTAAGAAAGAACCAGCCTTGAGCTGGATCGTAATCGGTAACCAAACTCATTCCTTCGCCGTCGCTGATTTGTCTCACCCTTCGAGCCAGATGATCTACACAATGTTAGAGACCATGGACAATGTAGATTTTGTAGATTACACTCTTGTTCATTTTTGTTCTGTTACATGA

Protein Analysis

748

Amino Acids

83.19

Weight (kDa)

5.78

Isoelectric Point (pI)

35.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 111 - 152 6e-07 PPR repeat family
PPR_2 PF13041 213 - 260 6e-07 PPR repeat family
PPR_2 PF13041 286 - 328 2.7e-07 PPR repeat family
PPR_2 PF13041 316 - 369 1.7e-11 PPR repeat family
PPR_2 PF13041 423 - 470 6.9e-09 PPR repeat family
PPR_2 PF13041 523 - 572 4.8e-10 PPR repeat family
PPR PF01535 527 - 556 1.9e-06 PPR repeat
E_motif PF20431 641 - 702 6.1e-14 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0019600)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13880
malus_domestica MD15G1395900.v1.1 MD15G1396200.v1.1 MD15G1407400.v1.1
prunus_persica Prupe.1G554200_v2.0.a1
pyrus_communis pycom15g35640 pycom15g36360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1496
AccI GTMKAC 1 cut(s) 1379
AccII CGCG 1 cut(s) 1947
AciI CCGC 4 cut(s) 689, 698, 1532, 1952
AclWI GGATC 2 cut(s) 645, 2111
AcsI RAATTY 1 cut(s) 652
AcuI CTGAAG 2 cut(s) 1248, 2022
AcyI GRCGYC 1 cut(s) 1493
AfaI GTAC 4 cut(s) 192, 248, 368, 871
AfeI AGCGCT 1 cut(s) 1192
AfiI CCNNNNNNNGG 2 cut(s) 292, 2100
AflIII ACRYGT 4 cut(s) 270, 573, 885, 1945
AjiI CACGTC 1 cut(s) 1890
Alw21I GWGCWC 2 cut(s) 1095, 1865
Alw26I GTCTC 4 cut(s) 720, 1951, 2154, 2180
AlwI GGATC 2 cut(s) 645, 2111
AlwNI CAGNNNCTG 1 cut(s) 1844
Ama87I CYCGRG 1 cut(s) 1976
Aor51HI AGCGCT 1 cut(s) 1192
AoxI GGCC 3 cut(s) 393, 730, 1980
ApeKI GCWGC 5 cut(s) 170, 686, 1109, 1315, 1418
ApoI RAATTY 1 cut(s) 652
Asp700I GAANNNNTTC 2 cut(s) 405, 1793
AspLEI GCGC 3 cut(s) 686, 1193, 1328
AspS9I GGNCC 1 cut(s) 1558
AsuC2I CCSGG 1 cut(s) 287
AsuHPI GGTGA 4 cut(s) 61, 1471, 2062, 2144
AsuII TTCGAA 1 cut(s) 944
AvaI CYCGRG 1 cut(s) 1976
AvaII GGWCC 1 cut(s) 1558
BanII GRGCYC 1 cut(s) 1865
BarI GAAGNNNNNNTAC 2 cut(s) 1751, 1783
BbsI GAAGAC 1 cut(s) 96
Bbv12I GWGCWC 2 cut(s) 1095, 1865
BbvI GCAGC 5 cut(s) 157, 698, 1121, 1327, 1405
BccI CCATC 5 cut(s) 370, 1081, 1226, 1887, 1957
BceAI ACGGC 3 cut(s) 144, 745, 2120
BcgI CGANNNNNNTGC 4 cut(s) 1190, 1224, 1566, 1600
BclI TGATCA 2 cut(s) 219, 555
BcnI CCSGG 1 cut(s) 287
BcoDI GTCTC 4 cut(s) 720, 1951, 2154, 2180
BfaI CTAG 3 cut(s) 417, 842, 1017
BfoI RGCGCY 1 cut(s) 1194
BisI GCNGC 6 cut(s) 171, 687, 1110, 1316, 1419, 1532
BlsI GCNGC 6 cut(s) 172, 688, 1111, 1317, 1420, 1533
Bme1390I CCNGG 1 cut(s) 287
Bme18I GGWCC 1 cut(s) 1558
BmeT110I CYCGRG 1 cut(s) 1976
BmgBI CACGTC 1 cut(s) 1890
BmgT120I GGNCC 1 cut(s) 1558
BmiI GGNNCC 2 cut(s) 184, 1065
BmrFI CCNGG 1 cut(s) 287
BmrI ACTGGG 1 cut(s) 203
BmsI GCATC 4 cut(s) 614, 927, 1462, 1831
BmuI ACTGGG 1 cut(s) 203
BpiI GAAGAC 1 cut(s) 96
BpmI CTGGAG 1 cut(s) 2046
Bpu10I CCTNAGC 1 cut(s) 1429
Bpu14I TTCGAA 1 cut(s) 944
BpuEI CTTGAG 3 cut(s) 30, 1582, 2116
BpuMI CCSGG 1 cut(s) 287
Bsa29I ATCGAT 2 cut(s) 1286, 1649
BsaAI YACGTR 4 cut(s) 450, 747, 960, 1996
BsaBI GATNNNNATC 1 cut(s) 2108
BsaHI GRCGYC 1 cut(s) 1493
BsaI GGTCTC 1 cut(s) 2180
BsaJI CCNNGG 7 cut(s) 186, 396, 1119, 1660, 1714, 1977, 2190
BsaWI WCCGGW 1 cut(s) 665
BsaXI ACNNNNNCTCC 2 cut(s) 1710, 1740
Bsc4I CCNNNNNNNGG 2 cut(s) 292, 2100
Bse118I RCCGGY 1 cut(s) 455
Bse1I ACTGG 4 cut(s) 198, 307, 1482, 1883
Bse3DI GCAATG 4 cut(s) 39, 875, 975, 1247
Bse8I GATNNNNATC 1 cut(s) 2108
BseCI ATCGAT 2 cut(s) 1286, 1649
BseDI CCNNGG 7 cut(s) 186, 396, 1119, 1660, 1714, 1977, 2190
BseGI GGATG 3 cut(s) 1000, 1355, 1879
BseJI GATNNNNATC 1 cut(s) 2108
BseLI CCNNNNNNNGG 2 cut(s) 292, 2100
BseMI GCAATG 4 cut(s) 39, 875, 975, 1247
BseMII CTCAG 5 cut(s) 386, 554, 1443, 1836, 1895
BseNI ACTGG 4 cut(s) 198, 307, 1482, 1883
BseRI GAGGAG 1 cut(s) 2060
BseXI GCAGC 5 cut(s) 157, 698, 1121, 1327, 1405
BsgI GTGCAG 1 cut(s) 1128
Bsh1236I CGCG 1 cut(s) 1947
BshFI GGCC 3 cut(s) 395, 732, 1982
BshVI ATCGAT 2 cut(s) 1286, 1649
BsiHKAI GWGCWC 2 cut(s) 1095, 1865
BsiHKCI CYCGRG 1 cut(s) 1976
BsiSI CCGG 3 cut(s) 286, 456, 666
BslI CCNNNNNNNGG 2 cut(s) 292, 2100
BsmAI GTCTC 4 cut(s) 720, 1951, 2154, 2180
BsmBI CGTCTC 1 cut(s) 720
BsmI GAATGC 2 cut(s) 327, 1242
BsnI GGCC 3 cut(s) 395, 732, 1982
Bso31I GGTCTC 1 cut(s) 2180
BsoBI CYCGRG 1 cut(s) 1976
Bsp119I TTCGAA 1 cut(s) 944
Bsp1286I GDGCHC 2 cut(s) 1095, 1865
Bsp19I CCATGG 2 cut(s) 396, 2190
BspACI CCGC 4 cut(s) 689, 698, 1532, 1952
BspANI GGCC 3 cut(s) 395, 732, 1982
BspCNI CTCAG 5 cut(s) 385, 553, 1442, 1837, 1896
BspDI ATCGAT 2 cut(s) 1286, 1649
BspFNI CGCG 1 cut(s) 1947
BspLI GGNNCC 2 cut(s) 184, 1065
BspPI GGATC 2 cut(s) 645, 2111
BspQI GCTCTTC 1 cut(s) 1040
BspT104I TTCGAA 1 cut(s) 944
BspTNI GGTCTC 1 cut(s) 2180
BsrDI GCAATG 4 cut(s) 39, 875, 975, 1247
BsrFI RCCGGY 1 cut(s) 455
BsrI ACTGG 4 cut(s) 198, 307, 1482, 1883
BssAI RCCGGY 1 cut(s) 455
BssECI CCNNGG 7 cut(s) 186, 396, 1119, 1660, 1714, 1977, 2190
BssNAI GTATAC 1 cut(s) 1380
BssNI GRCGYC 1 cut(s) 1493
BssT1I CCWWGG 3 cut(s) 396, 1119, 2190
Bst1107I GTATAC 1 cut(s) 1380
Bst4CI ACNGT 4 cut(s) 12, 827, 1384, 1616
Bst6I CTCTTC 2 cut(s) 1040, 1368
BstACI GRCGYC 1 cut(s) 1493
BstBAI YACGTR 4 cut(s) 450, 747, 960, 1996
BstBI TTCGAA 1 cut(s) 944
BstC8I GCNNGC 4 cut(s) 204, 304, 1536, 1683
BstDEI CTNAG 5 cut(s) 372, 540, 1429, 1845, 1904
BstDSI CCRYGG 5 cut(s) 186, 396, 1660, 1714, 2190
BstEII GGTNACC 1 cut(s) 2114
BstF5I GGATG 3 cut(s) 1000, 1355, 1879
BstFNI CGCG 1 cut(s) 1947
BstH2I RGCGCY 1 cut(s) 1194
BstHHI GCGC 3 cut(s) 686, 1193, 1328
BstMAI GTCTC 4 cut(s) 720, 1951, 2154, 2180
BstMWI GCNNNNNNNGC 4 cut(s) 422, 1106, 1415, 1628
BstNSI RCATGY 4 cut(s) 274, 577, 889, 1531
BstPI GGTNACC 1 cut(s) 2114
BstSCI CCNGG 1 cut(s) 285
BstSNI TACGTA 3 cut(s) 747, 960, 1996
BstUI CGCG 1 cut(s) 1947
BstV1I GCAGC 5 cut(s) 157, 698, 1121, 1327, 1405
BstV2I GAAGAC 1 cut(s) 96
BstXI CCANNNNNNTGG 1 cut(s) 1890
BstZ17I GTATAC 1 cut(s) 1380
Bsu15I ATCGAT 2 cut(s) 1286, 1649
BsuRI GGCC 3 cut(s) 395, 732, 1982
BsuTUI ATCGAT 2 cut(s) 1286, 1649
BtgI CCRYGG 5 cut(s) 186, 396, 1660, 1714, 2190
BtgZI GCGATG 1 cut(s) 642
BtrI CACGTC 1 cut(s) 1890
BtsCI GGATG 3 cut(s) 1000, 1355, 1879
BtsIMutI CAGTG 3 cut(s) 823, 1489, 1890
Cac8I GCNNGC 4 cut(s) 204, 304, 1536, 1683
CaiI CAGNNNCTG 1 cut(s) 1844
CfoI GCGC 3 cut(s) 686, 1193, 1328
Cfr10I RCCGGY 1 cut(s) 455
Cfr13I GGNCC 1 cut(s) 1558
ClaI ATCGAT 2 cut(s) 1286, 1649
Csp6I GTAC 4 cut(s) 191, 247, 367, 870
CviQI GTAC 4 cut(s) 191, 247, 367, 870
DdeI CTNAG 5 cut(s) 372, 540, 1429, 1845, 1904
Eam1104I CTCTTC 2 cut(s) 1040, 1368
EarI CTCTTC 2 cut(s) 1040, 1368
Ecl136II GAGCTC 1 cut(s) 1863
Eco105I TACGTA 3 cut(s) 747, 960, 1996
Eco130I CCWWGG 3 cut(s) 396, 1119, 2190
Eco147I AGGCCT 1 cut(s) 1982
Eco24I GRGCYC 1 cut(s) 1865
Eco31I GGTCTC 1 cut(s) 2180
Eco32I GATATC 2 cut(s) 975, 1270
Eco47I GGWCC 1 cut(s) 1558
Eco47III AGCGCT 1 cut(s) 1192
Eco53kI GAGCTC 1 cut(s) 1863
Eco57I CTGAAG 2 cut(s) 1248, 2022
Eco88I CYCGRG 1 cut(s) 1976
Eco91I GGTNACC 1 cut(s) 2114
EcoICRI GAGCTC 1 cut(s) 1863
EcoO65I GGTNACC 1 cut(s) 2114
EcoRI GAATTC 1 cut(s) 652
EcoRV GATATC 2 cut(s) 975, 1270
EcoT14I CCWWGG 3 cut(s) 396, 1119, 2190
EcoT22I ATGCAT 2 cut(s) 723, 1757
EcoT38I GRGCYC 1 cut(s) 1865
ErhI CCWWGG 3 cut(s) 396, 1119, 2190
Esp3I CGTCTC 1 cut(s) 720
FalI AAGNNNNNCTT 2 cut(s) 215, 247
FbaI TGATCA 2 cut(s) 219, 555
FblI GTMKAC 1 cut(s) 1379
Fnu4HI GCNGC 6 cut(s) 171, 687, 1110, 1316, 1419, 1532
FokI GGATG 3 cut(s) 1007, 1342, 1866
FriOI GRGCYC 1 cut(s) 1865
Fsp4HI GCNGC 6 cut(s) 171, 687, 1110, 1316, 1419, 1532
FspBI CTAG 3 cut(s) 417, 842, 1017
GlaI GCGC 3 cut(s) 685, 1192, 1327
GluI GCNGC 6 cut(s) 171, 687, 1110, 1316, 1419, 1532
GsuI CTGGAG 1 cut(s) 2046
HaeII RGCGCY 1 cut(s) 1194
HaeIII GGCC 3 cut(s) 395, 732, 1982
HapII CCGG 3 cut(s) 286, 456, 666
HhaI GCGC 3 cut(s) 686, 1193, 1328
Hin1I GRCGYC 1 cut(s) 1493
Hin6I GCGC 3 cut(s) 684, 1191, 1326
HinP1I GCGC 3 cut(s) 684, 1191, 1326
HindIII AAGCTT 4 cut(s) 593, 923, 1011, 1098
HinfI GANTC 8 cut(s) 50, 137, 1138, 1441, 1646, 1849, 2021, 2028
HpaII CCGG 3 cut(s) 286, 456, 666
HphI GGTGA 4 cut(s) 61, 1471, 2062, 2144
Hpy166II GTNNAC 4 cut(s) 369, 447, 1380, 1921
Hpy188III TCNNGA 6 cut(s) 47, 410, 491, 1431, 1874, 2025
Hpy8I GTNNAC 4 cut(s) 369, 447, 1380, 1921
Hpy99I CGWCG 2 cut(s) 1811, 2141
HpyAV CCTTC 6 cut(s) 137, 788, 951, 1125, 2140, 2166
HpyCH4III ACNGT 4 cut(s) 12, 827, 1384, 1616
HpyCH4IV ACGT 7 cut(s) 449, 746, 959, 1493, 1572, 1889, 1995
HpyF10VI GCNNNNNNNGC 4 cut(s) 422, 1106, 1415, 1628
HpyF3I CTNAG 5 cut(s) 372, 540, 1429, 1845, 1904
HpySE526I ACGT 7 cut(s) 449, 746, 959, 1493, 1572, 1889, 1995
Hsp92I GRCGYC 1 cut(s) 1493
HspAI GCGC 3 cut(s) 684, 1191, 1326
Ksp22I TGATCA 2 cut(s) 219, 555
LguI GCTCTTC 1 cut(s) 1040
LmnI GCTCC 3 cut(s) 188, 1188, 2007
Lsp1109I GCAGC 5 cut(s) 157, 698, 1121, 1327, 1405
LweI GCATC 4 cut(s) 614, 927, 1462, 1831
MaeI CTAG 3 cut(s) 417, 842, 1017
MaeII ACGT 7 cut(s) 449, 746, 959, 1493, 1572, 1889, 1995
MhlI GDGCHC 2 cut(s) 1095, 1865
MluI ACGCGT 1 cut(s) 1945
MlyI GAGTC 1 cut(s) 2037
MmeI TCCRAC 2 cut(s) 61, 1366
Mph1103I ATGCAT 2 cut(s) 723, 1757
MroXI GAANNNNTTC 2 cut(s) 405, 1793
MslI CAYNNNNRTG 3 cut(s) 374, 1043, 1505
MspA1I CMGCKG 2 cut(s) 170, 689
MspI CCGG 3 cut(s) 286, 456, 666
MspR9I CCNGG 1 cut(s) 287
Mva1269I GAATGC 2 cut(s) 327, 1242
MvnI CGCG 1 cut(s) 1947
MwoI GCNNNNNNNGC 4 cut(s) 422, 1106, 1415, 1628
NciI CCSGG 1 cut(s) 287
NcoI CCATGG 2 cut(s) 396, 2190
NlaIV GGNNCC 2 cut(s) 184, 1065
NmeAIII GCCGAG 1 cut(s) 1565
NmuCI GTSAC 2 cut(s) 1726, 1885
NsiI ATGCAT 2 cut(s) 723, 1757
NspI RCATGY 4 cut(s) 274, 577, 889, 1531
NspV TTCGAA 1 cut(s) 944
PceI AGGCCT 1 cut(s) 1982
PciI ACATGT 3 cut(s) 270, 573, 885
PciSI GCTCTTC 1 cut(s) 1040
PctI GAATGC 2 cut(s) 327, 1242
PdmI GAANNNNTTC 2 cut(s) 405, 1793
PfeI GAWTC 7 cut(s) 50, 137, 1138, 1441, 1646, 1849, 2021
PkrI GCNGC 6 cut(s) 172, 688, 1111, 1317, 1420, 1533
PleI GAGTC 1 cut(s) 2036
PpsI GAGTC 1 cut(s) 2036
Ppu21I YACGTR 4 cut(s) 450, 747, 960, 1996
PscI ACATGT 3 cut(s) 270, 573, 885
Psp124BI GAGCTC 1 cut(s) 1865
PspEI GGTNACC 1 cut(s) 2114
PspN4I GGNNCC 2 cut(s) 184, 1065
PspPI GGNCC 1 cut(s) 1558
PstNI CAGNNNCTG 1 cut(s) 1844
PvuII CAGCTG 1 cut(s) 170
RsaI GTAC 4 cut(s) 192, 248, 368, 871
RsaNI GTAC 4 cut(s) 191, 247, 367, 870
RseI CAYNNNNRTG 3 cut(s) 374, 1043, 1505
SacI GAGCTC 1 cut(s) 1865
SapI GCTCTTC 1 cut(s) 1040
SatI GCNGC 6 cut(s) 171, 687, 1110, 1316, 1419, 1532
Sau96I GGNCC 1 cut(s) 1558
SchI GAGTC 1 cut(s) 2037
ScrFI CCNGG 1 cut(s) 287
SduI GDGCHC 2 cut(s) 1095, 1865
SfaNI GCATC 4 cut(s) 614, 927, 1462, 1831
SfuI TTCGAA 1 cut(s) 944
SinI GGWCC 1 cut(s) 1558
SmiMI CAYNNNNRTG 3 cut(s) 374, 1043, 1505
SmlI CTYRAG 3 cut(s) 45, 1597, 2095
SmoI CTYRAG 3 cut(s) 45, 1597, 2095
SnaBI TACGTA 3 cut(s) 747, 960, 1996
SseBI AGGCCT 1 cut(s) 1982
SsiI CCGC 4 cut(s) 689, 698, 1532, 1952
SspMI CTAG 3 cut(s) 417, 842, 1017
SstI GAGCTC 1 cut(s) 1865
StuI AGGCCT 1 cut(s) 1982
StyD4I CCNGG 1 cut(s) 285
StyI CCWWGG 3 cut(s) 396, 1119, 2190
TaaI ACNGT 4 cut(s) 12, 827, 1384, 1616
TaiI ACGT 7 cut(s) 452, 749, 962, 1496, 1575, 1892, 1998
TatI WGTACW 1 cut(s) 246
TauI GCSGC 1 cut(s) 1534
TfiI GAWTC 7 cut(s) 50, 137, 1138, 1441, 1646, 1849, 2021
TscAI CASTG 3 cut(s) 830, 1489, 1890
TseFI GTSAC 2 cut(s) 1726, 1885
TseI GCWGC 5 cut(s) 170, 686, 1109, 1315, 1418
Tsp45I GTSAC 2 cut(s) 1726, 1885
TspGWI ACGGA 5 cut(s) 175, 857, 915, 1677, 1731
TspRI CASTG 3 cut(s) 830, 1489, 1890
VpaK11BI GGWCC 1 cut(s) 1558
XapI RAATTY 1 cut(s) 652
XceI RCATGY 4 cut(s) 274, 577, 889, 1531
XcmI CCANNNNNNNNNTGG 1 cut(s) 2097
XmiI GTMKAC 1 cut(s) 1379
XmnI GAANNNNTTC 2 cut(s) 405, 1793
XspI CTAG 3 cut(s) 417, 842, 1017
ZraI GACGTC 1 cut(s) 1494
Zsp2I ATGCAT 2 cut(s) 723, 1757
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.