Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0019600

Physical Location & Seq

Genomic Coordinates Forward (+)

50768241 .. 50771236

Gene Structure 2996 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1407400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2100 bp

ATGATCAAAACCTCCTTTAAGCCCTTTAGGTTTTTGCTCAACAATATTCTCACCATGTACTCTAGGCTCGGACAATTCGACAGTGCACGCCGCCTGTTCGATAGAATGCCTAAGCGGAATCTCATTTCGTACAACTCCTTGATTTCTGGATATAACGAGGTGGGTCTGTTTGAAAAGGCAATCGGTGTTTTTAACGAAGCAAGAATGGCTGGTTTAAAACTTGATAGGTTTACTTATGCTGGTGTCTTGAGTGTGTGTGGTCAAACCGGTGATTTTGAGCTGGGTAAGCTGGTTCATGGATTGATAGTCGTCAATGGATCGGGCTCAGAAGTTAGTTCGGATAACTTGGACCATGTCACATGGAATTCCTTGATTGCTTGCTATGCTCGAATTGGTGCTAACGAGGAAACATTGACCACTCTCGTGAAAATGCATCAGTGCGGGTTGAGCTTGAATACCTATACACTGGGGAGTGCCCTCAAGGCGTGTGGCAAAATTCTTGACAATTCAGGACTATTTGGGAAAATACTTCATGGATACACGGTGAAACTGGGGTTGGACTTGGATGTTGTAGTAAGAACAGCATTGCTTGATATGTATGCAAAGACTTGTGGCTTAGGTGAGGCGATACAAATATTCAAAATCATGCCTTACCGCAATGTTGTTCTCTATAATGTCATGATTGCGGGGTTCCTCCAAATAGAGACCTTTTCTTATGGACATGCAAATGAAGTGTTCAATCTTCTATCAGAGATGCAAAGGCTAGGAATCAAGCCATCAACATTTACTTTCTCAATCATATTGAGAACTTGTAAATCGGTTGAAGCTCTTAAGTATGGGAAACAAGTTCACTCTCAAGTCTACAAGTATGACCTACAAGGAGATGAATTCATTGGAAGTGGGCTTATTGAATTCTACTCTTCTGTGTGTTTATCCGATTATGCGTTGAGACGCTTTAACTTAACTCCTAGGCTAGATATTGTCTTGTGGACATCCATGGTTGCAGGTTATCTCCAAAATGGGGAAACTGAAAGTGCATTTGATTTATTTTATAGACTCTTGGAATTTGGAATGAAGCCTGATCAATTCATAATATCAAGCATGCTGGGTGCGTGTGCTGATTTGGCTGCAGCAAGATCAGGAGAGCAGATTCAAGGATATGCTGTAAAAGCTGGATTCGGGAAATTCACTATAGAGAATCCTGATGTGGTTTCCTGGTCCGTGATGATATGTAGCAAAGCACAACATGGATGTGCAAATGAAGCCTTGAATCTTTTTGAGTTGATGAAGACTTGTGGAATTGCACCCAACCACATCACTTTCCTTGGAGTTCTGATTGCATGCAGTCATGGATTATATTTTGAAACAAGGAAGAAAGATTATGACATGTCAACCAATGTAGAGCACTGTGCCTGCGTTGTTGATCTCCTAGGTCGTGCAGGAAGGCTAGCAGATGCTGAGAAGTTCATTTTCAACTCATCTTTTGAGGATAATCCAGTTATGTGGCGAGCCTTGTTGAGTGCTTGCAGGGTTTATATGGACACTGTTGCTGCAAAACGTGTTGCAGAAAAGCTAATTGATCTTGAACCTCAGGCTGCTGCATCATATGTTCTTCTGTACAACATTTACAATGATGCTGGGATAGAGTTACCGGCCAAAAGAATTAGGGAACTGATGAAAAATCGAGGAGTTAAGAAGGAACCTGGTCTAAGTTGGATAAAGGTAGGAAACAAAGTTCATTCTTTTGTTAGTGGCGATCGGTCTCACCAAATCGTTCAATTAATTTATACTCGGTTGGAAGAAATGTTGCATAAGATAAAGAAAATAGATTGTATTGTTGGTAAGTTGATTACTTCTGAACCGAAACTTAAGGACAGCAAAGTGAACTACCACAGTGAAAAGTTAGCTGTAACTTTTGGAATTATCAGCTTGCCAGCATCAGCTCCAGTTAGGGTGATGAAGAATTTGGGAGTCTTCTATGATTGTCATACAACAATGAAGCTCTTCTCTGAGGTGGAAAAAAGAGAAATAATCCTAAGAGATCCTATTCGTTTTCATCATTTCAGAGATGGTGCTTGTTCTTGTAGAGATTATTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

700

Amino Acids

78.38

Weight (kDa)

8.65

Isoelectric Point (pI)

36.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	40 - 86	2.2e-07	PPR repeat family
PPR_2	PF13041	117 - 165	1e-05	PPR repeat family
PPR_2	PF13041	219 - 271	7.1e-10	PPR repeat family
PPR_2	PF13041	326 - 373	1.6e-06	PPR repeat family
PPR_2	PF13041	401 - 448	4e-08	PPR repeat family
E_motif	PF20431	515 - 574	1.8e-14	E motif
DYW_deaminase	PF14432	624 - 699	2.3e-27	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0019600)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13880
malus_domestica	MD15G1395900.v1.1 MD15G1396200.v1.1 MD15G1407400.v1.1
prunus_persica	Prupe.1G554200_v2.0.a1
pyrus_communis	pycom15g35640 pycom15g36360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	995
AccI	GTMKAC	1 cut(s)	861
AciI	CCGC	5 cut(s)	91, 115, 441, 655, 686
AclWI	GGATC	2 cut(s)	325, 2036
AcoI	YGGCCR	1 cut(s)	1653
AcsI	RAATTY	7 cut(s)	364, 495, 887, 911, 1064, 1184, 1963
AfaI	GTAC	3 cut(s)	59, 131, 1619
AfiI	CCNNNNNNNGG	1 cut(s)	1021
AflII	CTTAAG	2 cut(s)	830, 1868
AflIII	ACRYGT	2 cut(s)	1386, 1558
AgeI	ACCGGT	1 cut(s)	266
AjnI	CCWGG	2 cut(s)	1214, 1702
AjuI	GAANNNNNNNTTGG	2 cut(s)	539, 571
AleI	CACNNNNGTG	1 cut(s)	422
AloI	GAACNNNNNNTCC	2 cut(s)	1719, 1751
Alw21I	GWGCWC	2 cut(s)	88, 1407
Alw26I	GTCTC	3 cut(s)	698, 943, 1767
Alw44I	GTGCAC	1 cut(s)	84
AlwI	GGATC	2 cut(s)	325, 2036
AlwNI	CAGNNNCTG	1 cut(s)	1457
AoxI	GGCC	1 cut(s)	1653
ApaLI	GTGCAC	1 cut(s)	84
ApeKI	GCWGC	5 cut(s)	1127, 1130, 1550, 1595, 1598
ApoI	RAATTY	7 cut(s)	364, 495, 887, 911, 1064, 1184, 1963
AseI	ATTAAT	1 cut(s)	1781
AsiGI	ACCGGT	1 cut(s)	266
Asp700I	GAANNNNTTC	1 cut(s)	2003
AspA2I	CCTAGG	2 cut(s)	968, 1429
AspS9I	GGNCC	2 cut(s)	349, 1218
AsuHPI	GGTGA	6 cut(s)	43, 281, 556, 632, 1757, 1966
AsuNHI	GCTAGC	1 cut(s)	1447
AvaII	GGWCC	2 cut(s)	349, 1218
AvrII	CCTAGG	2 cut(s)	968, 1429
AxyI	CCTNAGG	1 cut(s)	1590
BaeGI	GKGCMC	2 cut(s)	88, 478
BanII	GRGCYC	1 cut(s)	326
BauI	CACGAG	1 cut(s)	422
BbsI	GAAGAC	2 cut(s)	1295, 1966
Bbv12I	GWGCWC	2 cut(s)	88, 1407
BbvI	GCAGC	5 cut(s)	1114, 1142, 1537, 1582, 1585
BccI	CCATC	2 cut(s)	784, 2063
BciT130I	CCWGG	2 cut(s)	1216, 1704
BciVI	GTATCC	1 cut(s)	530
BclI	TGATCA	2 cut(s)	3, 1081
BcoDI	GTCTC	3 cut(s)	698, 943, 1767
BfaI	CTAG	6 cut(s)	63, 764, 969, 974, 1430, 1448
BfmI	CTRYAG	2 cut(s)	1128, 1191
BfrI	CTTAAG	2 cut(s)	830, 1868
BfuAI	ACCTGC	1 cut(s)	995
BfuI	GTATCC	1 cut(s)	530
BglI	GCCNNNNNGGC	1 cut(s)	482
BisI	GCNGC	6 cut(s)	91, 1128, 1131, 1551, 1596, 1599
BlnI	CCTAGG	2 cut(s)	968, 1429
BlsI	GCNGC	6 cut(s)	92, 1129, 1132, 1552, 1597, 1600
Bme1390I	CCNGG	2 cut(s)	1216, 1704
Bme18I	GGWCC	2 cut(s)	349, 1218
BmgT120I	GGNCC	2 cut(s)	349, 1218
BmiI	GGNNCC	2 cut(s)	692, 1701
BmrFI	CCNGG	2 cut(s)	1216, 1704
BmrI	ACTGGG	2 cut(s)	476, 560
BmsI	GCATC	6 cut(s)	442, 744, 1444, 1610, 1624, 1946
BmtI	GCTAGC	1 cut(s)	1451
BmuI	ACTGGG	2 cut(s)	476, 560
BpiI	GAAGAC	2 cut(s)	1295, 1966
BpmI	CTGGAG	1 cut(s)	1929
Bpu10I	CCTNAGC	2 cut(s)	111, 616
BpuEI	CTTGAG	3 cut(s)	268, 464, 840
BsaI	GGTCTC	2 cut(s)	698, 1767
BsaJI	CCNNGG	4 cut(s)	968, 996, 1324, 1429
BsaWI	WCCGGW	1 cut(s)	266
Bsc4I	CCNNNNNNNGG	1 cut(s)	1021
Bse118I	RCCGGY	2 cut(s)	266, 1651
Bse1I	ACTGG	4 cut(s)	471, 555, 1496, 1946
Bse21I	CCTNAGG	1 cut(s)	1590
Bse3DI	GCAATG	2 cut(s)	584, 664
BseBI	CCWGG	2 cut(s)	1216, 1704
BseDI	CCNNGG	4 cut(s)	968, 996, 1324, 1429
BseGI	GGATG	3 cut(s)	571, 992, 1256
BseLI	CCNNNNNNNGG	1 cut(s)	1021
BseMI	GCAATG	2 cut(s)	584, 664
BseMII	CTCAG	4 cut(s)	339, 1449, 1604, 2001
BseNI	ACTGG	4 cut(s)	471, 555, 1496, 1946
BseRI	GAGGAG	1 cut(s)	1701
BseSI	GKGCMC	2 cut(s)	88, 478
BseXI	GCAGC	5 cut(s)	1114, 1142, 1537, 1582, 1585
BseYI	CCCAGC	3 cut(s)	280, 1105, 1637
BsgI	GTGCAG	1 cut(s)	1458
Bsh1285I	CGRYCG	1 cut(s)	1759
BshFI	GGCC	1 cut(s)	1655
BshTI	ACCGGT	1 cut(s)	266
BsiEI	CGRYCG	1 cut(s)	1759
BsiHKAI	GWGCWC	2 cut(s)	88, 1407
BsiSI	CCGG	2 cut(s)	267, 1652
BslI	CCNNNNNNNGG	1 cut(s)	1021
BsmAI	GTCTC	3 cut(s)	698, 943, 1767
BsmBI	CGTCTC	1 cut(s)	943
BsmI	GAATGC	1 cut(s)	111
BsnI	GGCC	1 cut(s)	1655
Bso31I	GGTCTC	2 cut(s)	698, 1767
Bsp1286I	GDGCHC	4 cut(s)	88, 326, 478, 1407
Bsp1407I	TGTACA	1 cut(s)	1617
Bsp143I	GATC	8 cut(s)	3, 317, 1081, 1136, 1423, 1579, 1756, 2041
Bsp19I	CCATGG	1 cut(s)	996
BspACI	CCGC	5 cut(s)	91, 115, 441, 655, 686
BspANI	GGCC	1 cut(s)	1655
BspCNI	CTCAG	4 cut(s)	338, 1450, 1603, 2002
BspHI	TCATGA	1 cut(s)	678
BspLI	GGNNCC	2 cut(s)	692, 1701
BspMAI	CTGCAG	1 cut(s)	1132
BspMI	ACCTGC	1 cut(s)	995
BspOI	GCTAGC	1 cut(s)	1451
BspPI	GGATC	2 cut(s)	325, 2036
BspQI	GCTCTTC	1 cut(s)	2009
BspTI	CTTAAG	2 cut(s)	830, 1868
BspTNI	GGTCTC	2 cut(s)	698, 1767
BsrDI	GCAATG	2 cut(s)	584, 664
BsrFI	RCCGGY	2 cut(s)	266, 1651
BsrGI	TGTACA	1 cut(s)	1617
BsrI	ACTGG	4 cut(s)	471, 555, 1496, 1946
BssAI	RCCGGY	2 cut(s)	266, 1651
BssECI	CCNNGG	4 cut(s)	968, 996, 1324, 1429
BssMI	GATC	8 cut(s)	3, 317, 1081, 1136, 1423, 1579, 1756, 2041
BssSI	CACGAG	1 cut(s)	422
BssT1I	CCWWGG	4 cut(s)	968, 996, 1324, 1429
Bst2BI	CACGAG	1 cut(s)	422
Bst2UI	CCWGG	2 cut(s)	1216, 1704
Bst4CI	ACNGT	5 cut(s)	83, 544, 1409, 1546, 1895
Bst6I	CTCTTC	2 cut(s)	925, 2009
BstAFI	CTTAAG	2 cut(s)	830, 1868
BstAUI	TGTACA	1 cut(s)	1617
BstDEI	CTNAG	8 cut(s)	111, 325, 616, 1458, 1590, 1709, 2010, 2036
BstDSI	CCRYGG	1 cut(s)	996
BstF5I	GGATG	3 cut(s)	571, 992, 1256
BstKTI	GATC	8 cut(s)	6, 320, 1084, 1139, 1426, 1582, 1759, 2044
BstMAI	GTCTC	3 cut(s)	698, 943, 1767
BstMBI	GATC	8 cut(s)	3, 317, 1081, 1136, 1423, 1579, 1756, 2041
BstMCI	CGRYCG	1 cut(s)	1759
BstMWI	GCNNNNNNNGC	8 cut(s)	206, 286, 383, 447, 482, 1124, 1169, 1262
BstNI	CCWGG	2 cut(s)	1216, 1704
BstNSI	RCATGY	4 cut(s)	725, 1105, 1344, 1390
BstSCI	CCNGG	2 cut(s)	1214, 1702
BstSFI	CTRYAG	2 cut(s)	1128, 1191
BstSLI	GKGCMC	2 cut(s)	88, 478
BstV1I	GCAGC	5 cut(s)	1114, 1142, 1537, 1582, 1585
BstV2I	GAAGAC	2 cut(s)	1295, 1966
BstX2I	RGATCY	1 cut(s)	2041
BstXI	CCANNNNNNTGG	1 cut(s)	1503
BstYI	RGATCY	1 cut(s)	2041
Bsu36I	CCTNAGG	1 cut(s)	1590
BsuI	GTATCC	1 cut(s)	530
BsuRI	GGCC	1 cut(s)	1655
BtgI	CCRYGG	1 cut(s)	996
BtsCI	GGATG	3 cut(s)	571, 992, 1256
BtsIMutI	CAGTG	6 cut(s)	88, 443, 464, 1405, 1542, 1900
BveI	ACCTGC	1 cut(s)	995
CaiI	CAGNNNCTG	1 cut(s)	1457
CciI	TCATGA	1 cut(s)	678
Cfr10I	RCCGGY	2 cut(s)	266, 1651
Cfr13I	GGNCC	2 cut(s)	349, 1218
CseI	GACGC	1 cut(s)	960
CsiI	ACCWGGT	1 cut(s)	1702
Csp6I	GTAC	3 cut(s)	58, 130, 1618
CspAI	ACCGGT	1 cut(s)	266
CspCI	CAANNNNNGTGG	2 cut(s)	469, 504
CviQI	GTAC	3 cut(s)	58, 130, 1618
DdeI	CTNAG	8 cut(s)	111, 325, 616, 1458, 1590, 1709, 2010, 2036
DpnI	GATC	8 cut(s)	5, 319, 1083, 1138, 1425, 1581, 1758, 2043
DpnII	GATC	8 cut(s)	3, 317, 1081, 1136, 1423, 1579, 1756, 2041
DraI	TTTAAA	1 cut(s)	216
EaeI	YGGCCR	1 cut(s)	1653
Eam1104I	CTCTTC	2 cut(s)	925, 2009
EarI	CTCTTC	2 cut(s)	925, 2009
Eco130I	CCWWGG	4 cut(s)	968, 996, 1324, 1429
Eco24I	GRGCYC	1 cut(s)	326
Eco31I	GGTCTC	2 cut(s)	698, 1767
Eco47I	GGWCC	2 cut(s)	349, 1218
Eco81I	CCTNAGG	1 cut(s)	1590
EcoRI	GAATTC	3 cut(s)	364, 887, 911
EcoRII	CCWGG	2 cut(s)	1214, 1702
EcoT14I	CCWWGG	4 cut(s)	968, 996, 1324, 1429
EcoT22I	ATGCAT	1 cut(s)	435
EcoT38I	GRGCYC	1 cut(s)	326
ErhI	CCWWGG	4 cut(s)	968, 996, 1324, 1429
Esp3I	CGTCTC	1 cut(s)	943
FauI	CCCGC	2 cut(s)	434, 679
FauNDI	CATATG	1 cut(s)	1606
FbaI	TGATCA	2 cut(s)	3, 1081
FblI	GTMKAC	1 cut(s)	861
Fnu4HI	GCNGC	6 cut(s)	91, 1128, 1131, 1551, 1596, 1599
FokI	GGATG	3 cut(s)	578, 979, 1263
FriOI	GRGCYC	1 cut(s)	326
Fsp4HI	GCNGC	6 cut(s)	91, 1128, 1131, 1551, 1596, 1599
FspBI	CTAG	6 cut(s)	63, 764, 969, 974, 1430, 1448
GluI	GCNGC	6 cut(s)	91, 1128, 1131, 1551, 1596, 1599
GsaI	CCCAGC	3 cut(s)	284, 1109, 1641
GsuI	CTGGAG	1 cut(s)	1929
HaeIII	GGCC	1 cut(s)	1655
HapII	CCGG	2 cut(s)	267, 1652
HgaI	GACGC	1 cut(s)	960
HincII	GTYRAC	1 cut(s)	1392
HindII	GTYRAC	1 cut(s)	1392
HinfI	GANTC	8 cut(s)	118, 768, 1056, 1150, 1176, 1198, 1270, 1971
HpaII	CCGG	2 cut(s)	267, 1652
HphI	GGTGA	6 cut(s)	43, 281, 556, 632, 1757, 1966
Hpy166II	GTNNAC	7 cut(s)	86, 231, 850, 862, 990, 1392, 1885
Hpy188I	TCNGA	9 cut(s)	71, 328, 340, 751, 937, 1335, 1858, 2011, 2066
Hpy8I	GTNNAC	7 cut(s)	86, 231, 850, 862, 990, 1392, 1885
HpyAV	CCTTC	2 cut(s)	1437, 1690
HpyCH4III	ACNGT	5 cut(s)	83, 544, 1409, 1546, 1895
HpyCH4IV	ACGT	1 cut(s)	1558
HpyF10VI	GCNNNNNNNGC	8 cut(s)	206, 286, 383, 447, 482, 1124, 1169, 1262
HpyF3I	CTNAG	8 cut(s)	111, 325, 616, 1458, 1590, 1709, 2010, 2036
HpySE526I	ACGT	1 cut(s)	1558
Ksp22I	TGATCA	2 cut(s)	3, 1081
Kzo9I	GATC	8 cut(s)	3, 317, 1081, 1136, 1423, 1579, 1756, 2041
LguI	GCTCTTC	1 cut(s)	2009
LmnI	GCTCC	1 cut(s)	1948
Lsp1109I	GCAGC	5 cut(s)	1114, 1142, 1537, 1582, 1585
LweI	GCATC	6 cut(s)	442, 744, 1444, 1610, 1624, 1946
MabI	ACCWGGT	1 cut(s)	1702
MaeI	CTAG	6 cut(s)	63, 764, 969, 974, 1430, 1448
MaeII	ACGT	1 cut(s)	1558
MaeIII	GTNAC	3 cut(s)	355, 1647, 1909
MalI	GATC	8 cut(s)	5, 319, 1083, 1138, 1425, 1581, 1758, 2043
MboI	GATC	8 cut(s)	3, 317, 1081, 1136, 1423, 1579, 1756, 2041
MboII	GAAGA	9 cut(s)	734, 912, 1300, 1384, 1604, 1811, 1966, 1972, 1996
MflI	RGATCY	1 cut(s)	2041
MhlI	GDGCHC	4 cut(s)	88, 326, 478, 1407
MlyI	GAGTC	2 cut(s)	1050, 1980
MmeI	TCCRAC	3 cut(s)	537, 1694, 1776
Mph1103I	ATGCAT	1 cut(s)	435
MroXI	GAANNNNTTC	1 cut(s)	2003
MseI	TTAA	9 cut(s)	18, 192, 215, 831, 957, 962, 1692, 1781, 1869
MslI	CAYNNNNRTG	3 cut(s)	422, 726, 1251
MspCI	CTTAAG	2 cut(s)	830, 1868
MspI	CCGG	2 cut(s)	267, 1652
MspR9I	CCNGG	2 cut(s)	1216, 1704
Mva1269I	GAATGC	1 cut(s)	111
MvaI	CCWGG	2 cut(s)	1216, 1704
MwoI	GCNNNNNNNGC	8 cut(s)	206, 286, 383, 447, 482, 1124, 1169, 1262
NcoI	CCATGG	1 cut(s)	996
NdeI	CATATG	1 cut(s)	1606
NdeII	GATC	8 cut(s)	3, 317, 1081, 1136, 1423, 1579, 1756, 2041
NheI	GCTAGC	1 cut(s)	1447
NlaIV	GGNNCC	2 cut(s)	692, 1701
NmuCI	GTSAC	1 cut(s)	355
NsiI	ATGCAT	1 cut(s)	435
NspI	RCATGY	4 cut(s)	725, 1105, 1344, 1390
OliI	CACNNNNGTG	1 cut(s)	422
PaeI	GCATGC	2 cut(s)	1105, 1344
PagI	TCATGA	1 cut(s)	678
PciI	ACATGT	1 cut(s)	1386
PciSI	GCTCTTC	1 cut(s)	2009
PcsI	WCGNNNNNNNCGW	1 cut(s)	75
PctI	GAATGC	1 cut(s)	111
PdmI	GAANNNNTTC	1 cut(s)	2003
PfeI	GAWTC	6 cut(s)	118, 768, 1150, 1176, 1198, 1270
PflFI	GACNNNGTC	1 cut(s)	353
PinAI	ACCGGT	1 cut(s)	266
PkrI	GCNGC	6 cut(s)	92, 1129, 1132, 1552, 1597, 1600
Ple19I	CGATCG	1 cut(s)	1759
PleI	GAGTC	2 cut(s)	1050, 1979
PpsI	GAGTC	2 cut(s)	1050, 1979
PscI	ACATGT	1 cut(s)	1386
PshBI	ATTAAT	1 cut(s)	1781
Psp6I	CCWGG	2 cut(s)	1214, 1702
PspFI	CCCAGC	3 cut(s)	280, 1105, 1637
PspGI	CCWGG	2 cut(s)	1214, 1702
PspN4I	GGNNCC	2 cut(s)	692, 1701
PspPI	GGNCC	2 cut(s)	349, 1218
PstI	CTGCAG	1 cut(s)	1132
PstNI	CAGNNNCTG	1 cut(s)	1457
PsuI	RGATCY	1 cut(s)	2041
PsyI	GACNNNGTC	1 cut(s)	353
PvuI	CGATCG	1 cut(s)	1759
RsaI	GTAC	3 cut(s)	59, 131, 1619
RsaNI	GTAC	3 cut(s)	58, 130, 1618
RseI	CAYNNNNRTG	3 cut(s)	422, 726, 1251
SapI	GCTCTTC	1 cut(s)	2009
SaqAI	TTAA	9 cut(s)	18, 192, 215, 831, 957, 962, 1692, 1781, 1869
SatI	GCNGC	6 cut(s)	91, 1128, 1131, 1551, 1596, 1599
Sau3AI	GATC	8 cut(s)	3, 317, 1081, 1136, 1423, 1579, 1756, 2041
Sau96I	GGNCC	2 cut(s)	349, 1218
SchI	GAGTC	2 cut(s)	1050, 1980
ScrFI	CCNGG	2 cut(s)	1216, 1704
SduI	GDGCHC	4 cut(s)	88, 326, 478, 1407
SexAI	ACCWGGT	1 cut(s)	1702
SfaNI	GCATC	6 cut(s)	442, 744, 1444, 1610, 1624, 1946
SfcI	CTRYAG	2 cut(s)	1128, 1191
SinI	GGWCC	2 cut(s)	349, 1218
SmiMI	CAYNNNNRTG	3 cut(s)	422, 726, 1251
SmlI	CTYRAG	5 cut(s)	247, 479, 830, 855, 1868
SmoI	CTYRAG	5 cut(s)	247, 479, 830, 855, 1868
SphI	GCATGC	2 cut(s)	1105, 1344
SsiI	CCGC	5 cut(s)	91, 115, 441, 655, 686
SspI	AATATT	2 cut(s)	46, 636
SspMI	CTAG	6 cut(s)	63, 764, 969, 974, 1430, 1448
StyD4I	CCNGG	2 cut(s)	1214, 1702
StyI	CCWWGG	4 cut(s)	968, 996, 1324, 1429
TaaI	ACNGT	5 cut(s)	83, 544, 1409, 1546, 1895
TaiI	ACGT	1 cut(s)	1561
TaqI	TCGA	4 cut(s)	78, 99, 388, 1684
TaqII	GACCGA	1 cut(s)	1749
TatI	WGTACW	2 cut(s)	57, 1617
TauI	GCSGC	1 cut(s)	93
TfiI	GAWTC	6 cut(s)	118, 768, 1150, 1176, 1198, 1270
Tru1I	TTAA	9 cut(s)	18, 192, 215, 831, 957, 962, 1692, 1781, 1869
Tru9I	TTAA	9 cut(s)	18, 192, 215, 831, 957, 962, 1692, 1781, 1869
TscAI	CASTG	6 cut(s)	88, 443, 471, 1412, 1549, 1900
TseFI	GTSAC	1 cut(s)	355
TseI	GCWGC	5 cut(s)	1127, 1130, 1550, 1595, 1598
Tsp45I	GTSAC	1 cut(s)	355
TspGWI	ACGGA	1 cut(s)	1210
TspRI	CASTG	6 cut(s)	88, 443, 471, 1412, 1549, 1900
Tth111I	GACNNNGTC	1 cut(s)	353
Vha464I	CTTAAG	2 cut(s)	830, 1868
VneI	GTGCAC	1 cut(s)	84
VpaK11BI	GGWCC	2 cut(s)	349, 1218
VspI	ATTAAT	1 cut(s)	1781
XapI	RAATTY	7 cut(s)	364, 495, 887, 911, 1064, 1184, 1963
XceI	RCATGY	4 cut(s)	725, 1105, 1344, 1390
XmaJI	CCTAGG	2 cut(s)	968, 1429
XmiI	GTMKAC	1 cut(s)	861
XmnI	GAANNNNTTC	1 cut(s)	2003
XspI	CTAG	6 cut(s)	63, 764, 969, 974, 1430, 1448
Zsp2I	ATGCAT	1 cut(s)	435

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.