Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0019600

Physical Location & Seq

Genomic Coordinates Forward (+)

49578212 .. 49583165

Gene Structure 4954 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1396200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1788 bp

ATGTTGCCTCAACCCGCACCTACTCCACAGCAGTGCTCTCAACTTTGCCATCCCAACTATTCTCTCGACAATGTTGCCTATACAAAACTTGTCCAACACGCTACCAAAACTGGGTCTTCACTCCACGGCAAACTTGCCCACGCCCACATCATCAAAACCTCATTTAAGCCCTATATGTTTTTTCTCAACAATCTTCTCACCATGTACTCTAGGCTCGGAGAATTCGACAGTGCACGCCACCTGTTCGATAGAATGCCTAAGCGGAATCTCATTTCGTACAACTCATTGATTTCTGGATATAACGAGGTGGGTCTGTTTGATAAGGCAATGGGTGTTTTTAAAGAAGCAAGAATGGCTGGTTTAAAACTTGATAGGTTTACTTATGCCGGTGTTTTGAGTGTGTGTGGTCAAACATGTGATTTTGAGCTGGGTAAGATGGTTCATGGATTGATAGTCATCAACGGGTCGGGCTCAGAAGTTGCGTGTGGCAAAATTCTTGACAATTCAGGACTATTTGGGAAAATACTTCATGGATACAATGTCAAACTGGGGTTGGACTTGGATGTTGCAGTAGGAACGACATTGCTTGATATGTATGCAAAGACTTGTGGCTTAGGTGAGGCGATACAAATATTCAAATTCATGCCTTACCGCAATGTTGTTTTGTATAATGCCATGATTGTGGGGTTCCTCCAAATAGAGACCTTTTCTTATGGACATGCAAATGAAGTGTTTAATCTTCTATTAGAGATGCAAAGGCTAGGAATCAAGCCATCAACATTTACTTTCTCAATCATATTGAGAGCTTGTAAATCGGTTGAAGCTCTTGAGTACGGGAAACAGGTTCACACTCAAGTCTACAAGTATGACCTACAGGGAGATGAATTCATTGGAAGTGGGCTTATTGATTTCTACTGTTCTGTGGGTTTATCCACTTATGCGTTGAGATGCTTTAACTTAACTCCTAGGCTAGATATTGTCTCGTGGACATCCATGGTTGCAGGTTATATCCAAAATGGGGAAATTGAAAGTGCATTTGATTTATTTTATAAACTCTTAGAATCTGGAATGAAGCCTGATGAATTCATAATATCAAGCATGTTGGGTGCGTGTGCTGATTTGGCTGCAGCAAGATCTGGAGAGCAGATCCAAGGATATGCTATATGCATGTATGCAAAATCTGGAGATATTGATTATGCTAATTTTTCCTTTACAGAGATAGAGAATCCTGATGTGGTTTCCTGGTTCGTGATGATATGTAGCAAAGCACAACATGGATGTGCAAATGAAGCCTTGAATCTTTTTGAGTTGATGAAGACTTGTGGAATTGCACCCAACCACATCACTTTCCTTGGAGTTCTAACTGCATGCAGTCATGGAGGGCTAGTAGAAGAAGGTTTACGATATTTTGAAACAATGAAGAAAGATTATGGCATGTCAACCAATGTAGAGCACTGTGCCTGCGTTGTTGATCTCCTAGGTCGTGCAGGAAGGCTAGCAGATGCTGAGAAGGTTTATATGGACACTGTTGCTGCAAAACGTGTTGCAGAAAAACTAATTGATCTTGAACCTCAAGCTGCTGCATCATATGTTCTTCTGTACAACATTTACAATGATGCTGCGATAGAGTTACCGGCCAAAAGAATTAGGGAACTGATGAAAAATCGAGGAGTTAAGAAGGAACCTGGTCTAAGTTGGATAGAGGTAGGAAACAAAGTTCATTCTTTTGTTAGTGGCGATCGGTCTCACCAAATGGTTCAATTAATATATACTCGGTTGGTTGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

596

Amino Acids

66.02

Weight (kDa)

6.47

Isoelectric Point (pI)

35.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	89 - 135	6e-07	PPR repeat family
PPR_2	PF13041	218 - 270	3.4e-09	PPR repeat family
PPR_2	PF13041	325 - 372	1e-08	PPR repeat family
PPR	PF01535	327 - 356	3.7e-06	PPR repeat
PPR_2	PF13041	410 - 458	6.2e-08	PPR repeat family
E_motif	PF20431	509 - 568	5.8e-14	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0019600)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13880
malus_domestica	MD15G1395900.v1.1 MD15G1396200.v1.1 MD15G1407400.v1.1
prunus_persica	Prupe.1G554200_v2.0.a1
pyrus_communis	pycom15g35640 pycom15g36360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1050
Acc36I	ACCTGC	1 cut(s)	992
AccI	GTMKAC	1 cut(s)	858
AciI	CCGC	3 cut(s)	15, 262, 652
AclWI	GGATC	1 cut(s)	1141
AcoI	YGGCCR	1 cut(s)	1635
AcsI	RAATTY	5 cut(s)	221, 492, 638, 884, 1082
AfaI	GTAC	4 cut(s)	206, 278, 833, 1601
AfiI	CCNNNNNNNGG	2 cut(s)	111, 1018
AflIII	ACRYGT	2 cut(s)	413, 1540
AgsI	TTSAA	7 cut(s)	637, 821, 1028, 1297, 1412, 1568, 1760
AjnI	CCWGG	2 cut(s)	1241, 1684
AleI	CACNNNNGTG	1 cut(s)	31
AloI	GAACNNNNNNTCC	2 cut(s)	1701, 1733
AluBI	AGCT	4 cut(s)	427, 806, 824, 1577
AluI	AGCT	4 cut(s)	427, 806, 824, 1577
Alw21I	GWGCWC	3 cut(s)	38, 235, 1455
Alw26I	GTCTC	3 cut(s)	695, 985, 1749
Alw44I	GTGCAC	1 cut(s)	231
AlwI	GGATC	1 cut(s)	1141
AlwNI	CAGNNNCTG	1 cut(s)	1505
AoxI	GGCC	1 cut(s)	1635
ApaLI	GTGCAC	1 cut(s)	231
ApeKI	GCWGC	6 cut(s)	1124, 1127, 1532, 1577, 1580, 1619
ApoI	RAATTY	5 cut(s)	221, 492, 638, 884, 1082
AseI	ATTAAT	1 cut(s)	1763
AspA2I	CCTAGG	2 cut(s)	965, 1477
AsuHPI	GGTGA	3 cut(s)	190, 629, 1739
AsuNHI	GCTAGC	1 cut(s)	1495
AvrII	CCTAGG	2 cut(s)	965, 1477
BaeGI	GKGCMC	1 cut(s)	235
BanII	GRGCYC	1 cut(s)	473
BarI	GAAGNNNNNNTAC	2 cut(s)	1383, 1415
BauI	CACGAG	1 cut(s)	982
BbsI	GAAGAC	2 cut(s)	108, 1322
Bbv12I	GWGCWC	3 cut(s)	38, 235, 1455
BbvI	GCAGC	6 cut(s)	1111, 1139, 1519, 1564, 1567, 1606
BccI	CCATC	3 cut(s)	57, 430, 781
BceAI	ACGGC	1 cut(s)	142
BcgI	CGANNNNNNTGC	2 cut(s)	56, 90
BciT130I	CCWGG	2 cut(s)	1243, 1686
BciVI	GTATCC	1 cut(s)	527
BcoDI	GTCTC	3 cut(s)	695, 985, 1749
BfaI	CTAG	7 cut(s)	210, 761, 966, 971, 1385, 1478, 1496
BfmI	CTRYAG	2 cut(s)	872, 1125
BfuAI	ACCTGC	1 cut(s)	992
BfuI	GTATCC	1 cut(s)	527
BglII	AGATCT	1 cut(s)	1133
BisI	GCNGC	6 cut(s)	1125, 1128, 1533, 1578, 1581, 1620
BlnI	CCTAGG	2 cut(s)	965, 1477
BlsI	GCNGC	6 cut(s)	1126, 1129, 1534, 1579, 1582, 1621
Bme1390I	CCNGG	2 cut(s)	1243, 1686
BmiI	GGNNCC	2 cut(s)	689, 1683
BmrFI	CCNGG	2 cut(s)	1243, 1686
BmrI	ACTGGG	2 cut(s)	120, 557
BmsI	GCATC	5 cut(s)	741, 938, 1492, 1592, 1606
BmtI	GCTAGC	1 cut(s)	1499
BmuI	ACTGGG	2 cut(s)	120, 557
BpiI	GAAGAC	2 cut(s)	108, 1322
BpmI	CTGGAG	2 cut(s)	1158, 1203
Bpu10I	CCTNAGC	2 cut(s)	258, 613
BpuEI	CTTGAG	3 cut(s)	837, 848, 1557
BsaBI	GATNNNNATC	1 cut(s)	455
BsaI	GGTCTC	2 cut(s)	695, 1749
BsaJI	CCNNGG	6 cut(s)	124, 965, 993, 1150, 1351, 1477
BsaXI	ACNNNNNCTCC	2 cut(s)	1371, 1401
Bsc4I	CCNNNNNNNGG	2 cut(s)	111, 1018
Bse118I	RCCGGY	2 cut(s)	386, 1633
Bse1I	ACTGG	2 cut(s)	115, 552
Bse3DI	GCAATG	3 cut(s)	333, 581, 661
Bse8I	GATNNNNATC	1 cut(s)	455
BseBI	CCWGG	2 cut(s)	1243, 1686
BseDI	CCNNGG	6 cut(s)	124, 965, 993, 1150, 1351, 1477
BseGI	GGATG	4 cut(s)	49, 568, 989, 1283
BseJI	GATNNNNATC	1 cut(s)	455
BseLI	CCNNNNNNNGG	2 cut(s)	111, 1018
BseMI	GCAATG	3 cut(s)	333, 581, 661
BseMII	CTCAG	2 cut(s)	486, 1497
BseNI	ACTGG	2 cut(s)	115, 552
BseRI	GAGGAG	1 cut(s)	1683
BseSI	GKGCMC	1 cut(s)	235
BseXI	GCAGC	6 cut(s)	1111, 1139, 1519, 1564, 1567, 1606
BseYI	CCCAGC	1 cut(s)	427
BsgI	GTGCAG	1 cut(s)	1506
Bsh1285I	CGRYCG	1 cut(s)	1741
BshFI	GGCC	1 cut(s)	1637
BsiEI	CGRYCG	1 cut(s)	1741
BsiHKAI	GWGCWC	3 cut(s)	38, 235, 1455
BsiSI	CCGG	2 cut(s)	387, 1634
BslI	CCNNNNNNNGG	2 cut(s)	111, 1018
BsmAI	GTCTC	3 cut(s)	695, 985, 1749
BsmI	GAATGC	1 cut(s)	258
BsnI	GGCC	1 cut(s)	1637
Bso31I	GGTCTC	2 cut(s)	695, 1749
Bsp1286I	GDGCHC	4 cut(s)	38, 235, 473, 1455
Bsp1407I	TGTACA	1 cut(s)	1599
Bsp143I	GATC	5 cut(s)	1133, 1146, 1471, 1561, 1738
Bsp19I	CCATGG	1 cut(s)	993
BspACI	CCGC	3 cut(s)	15, 262, 652
BspANI	GGCC	1 cut(s)	1637
BspCNI	CTCAG	2 cut(s)	485, 1498
BspLI	GGNNCC	2 cut(s)	689, 1683
BspMAI	CTGCAG	1 cut(s)	1129
BspMI	ACCTGC	1 cut(s)	992
BspOI	GCTAGC	1 cut(s)	1499
BspPI	GGATC	1 cut(s)	1141
BspTNI	GGTCTC	2 cut(s)	695, 1749
BsrDI	GCAATG	3 cut(s)	333, 581, 661
BsrFI	RCCGGY	2 cut(s)	386, 1633
BsrGI	TGTACA	1 cut(s)	1599
BsrI	ACTGG	2 cut(s)	115, 552
BssAI	RCCGGY	2 cut(s)	386, 1633
BssECI	CCNNGG	6 cut(s)	124, 965, 993, 1150, 1351, 1477
BssMI	GATC	5 cut(s)	1133, 1146, 1471, 1561, 1738
BssSI	CACGAG	1 cut(s)	982
BssT1I	CCWWGG	5 cut(s)	965, 993, 1150, 1351, 1477
Bst2BI	CACGAG	1 cut(s)	982
Bst2UI	CCWGG	2 cut(s)	1243, 1686
Bst4CI	ACNGT	4 cut(s)	230, 917, 1457, 1528
BstAUI	TGTACA	1 cut(s)	1599
BstC8I	GCNNGC	4 cut(s)	235, 1369, 1462, 1497
BstDEI	CTNAG	6 cut(s)	258, 472, 613, 1057, 1506, 1691
BstDSI	CCRYGG	2 cut(s)	124, 993
BstF5I	GGATG	4 cut(s)	49, 568, 989, 1283
BstKTI	GATC	5 cut(s)	1136, 1149, 1474, 1564, 1741
BstMAI	GTCTC	3 cut(s)	695, 985, 1749
BstMBI	GATC	5 cut(s)	1133, 1146, 1471, 1561, 1738
BstMCI	CGRYCG	1 cut(s)	1741
BstMWI	GCNNNNNNNGC	3 cut(s)	353, 1121, 1289
BstNI	CCWGG	2 cut(s)	1243, 1686
BstNSI	RCATGY	6 cut(s)	417, 722, 1102, 1171, 1371, 1438
BstSCI	CCNGG	2 cut(s)	1241, 1684
BstSFI	CTRYAG	2 cut(s)	872, 1125
BstSLI	GKGCMC	1 cut(s)	235
BstV1I	GCAGC	6 cut(s)	1111, 1139, 1519, 1564, 1567, 1606
BstV2I	GAAGAC	2 cut(s)	108, 1322
BstX2I	RGATCY	2 cut(s)	1133, 1146
BstXI	CCANNNNNNTGG	1 cut(s)	682
BstYI	RGATCY	2 cut(s)	1133, 1146
BsuI	GTATCC	1 cut(s)	527
BsuRI	GGCC	1 cut(s)	1637
BtgI	CCRYGG	2 cut(s)	124, 993
BtsCI	GGATG	4 cut(s)	49, 568, 989, 1283
BtsI	GCAGTG	1 cut(s)	38
BtsIMutI	CAGTG	4 cut(s)	38, 235, 1453, 1524
BveI	ACCTGC	1 cut(s)	992
Cac8I	GCNNGC	4 cut(s)	235, 1369, 1462, 1497
CaiI	CAGNNNCTG	1 cut(s)	1505
Cfr10I	RCCGGY	2 cut(s)	386, 1633
CsiI	ACCWGGT	1 cut(s)	1684
Csp6I	GTAC	4 cut(s)	205, 277, 832, 1600
CviQI	GTAC	4 cut(s)	205, 277, 832, 1600
DdeI	CTNAG	6 cut(s)	258, 472, 613, 1057, 1506, 1691
DpnI	GATC	5 cut(s)	1135, 1148, 1473, 1563, 1740
DpnII	GATC	5 cut(s)	1133, 1146, 1471, 1561, 1738
DraI	TTTAAA	2 cut(s)	340, 363
EaeI	YGGCCR	1 cut(s)	1635
Eco130I	CCWWGG	5 cut(s)	965, 993, 1150, 1351, 1477
Eco24I	GRGCYC	1 cut(s)	473
Eco31I	GGTCTC	2 cut(s)	695, 1749
EcoRI	GAATTC	3 cut(s)	221, 884, 1082
EcoRII	CCWGG	2 cut(s)	1241, 1684
EcoT14I	CCWWGG	5 cut(s)	965, 993, 1150, 1351, 1477
EcoT22I	ATGCAT	1 cut(s)	1169
EcoT38I	GRGCYC	1 cut(s)	473
ErhI	CCWWGG	5 cut(s)	965, 993, 1150, 1351, 1477
FauI	CCCGC	1 cut(s)	22
FauNDI	CATATG	1 cut(s)	1588
FblI	GTMKAC	1 cut(s)	858
Fnu4HI	GCNGC	6 cut(s)	1125, 1128, 1533, 1578, 1581, 1620
FokI	GGATG	4 cut(s)	36, 575, 976, 1290
FriOI	GRGCYC	1 cut(s)	473
Fsp4HI	GCNGC	6 cut(s)	1125, 1128, 1533, 1578, 1581, 1620
FspBI	CTAG	7 cut(s)	210, 761, 966, 971, 1385, 1478, 1496
GluI	GCNGC	6 cut(s)	1125, 1128, 1533, 1578, 1581, 1620
GsaI	CCCAGC	1 cut(s)	431
GsuI	CTGGAG	2 cut(s)	1158, 1203
HaeIII	GGCC	1 cut(s)	1637
HapII	CCGG	2 cut(s)	387, 1634
HincII	GTYRAC	1 cut(s)	1440
HindII	GTYRAC	1 cut(s)	1440
HinfI	GANTC	5 cut(s)	265, 765, 1061, 1225, 1297
HpaII	CCGG	2 cut(s)	387, 1634
HphI	GGTGA	3 cut(s)	190, 629, 1739
Hpy166II	GTNNAC	7 cut(s)	233, 378, 847, 859, 987, 1400, 1440
Hpy188I	TCNGA	2 cut(s)	218, 475
Hpy8I	GTNNAC	7 cut(s)	233, 378, 847, 859, 987, 1400, 1440
HpyAV	CCTTC	4 cut(s)	1388, 1485, 1504, 1672
HpyCH4III	ACNGT	4 cut(s)	230, 917, 1457, 1528
HpyCH4IV	ACGT	1 cut(s)	1540
HpyF10VI	GCNNNNNNNGC	3 cut(s)	353, 1121, 1289
HpyF3I	CTNAG	6 cut(s)	258, 472, 613, 1057, 1506, 1691
HpySE526I	ACGT	1 cut(s)	1540
Kzo9I	GATC	5 cut(s)	1133, 1146, 1471, 1561, 1738
Lsp1109I	GCAGC	6 cut(s)	1111, 1139, 1519, 1564, 1567, 1606
LweI	GCATC	5 cut(s)	741, 938, 1492, 1592, 1606
MabI	ACCWGGT	1 cut(s)	1684
MaeI	CTAG	7 cut(s)	210, 761, 966, 971, 1385, 1478, 1496
MaeII	ACGT	1 cut(s)	1540
MaeIII	GTNAC	1 cut(s)	1629
MalI	GATC	5 cut(s)	1135, 1148, 1473, 1563, 1740
MboI	GATC	5 cut(s)	1133, 1146, 1471, 1561, 1738
MboII	GAAGA	7 cut(s)	108, 185, 731, 1327, 1403, 1432, 1586
MflI	RGATCY	2 cut(s)	1133, 1146
MhlI	GDGCHC	4 cut(s)	38, 235, 473, 1455
MmeI	TCCRAC	3 cut(s)	118, 534, 1676
MnlI	CCTC	9 cut(s)	18, 169, 298, 613, 701, 1373, 1581, 1661, 1696
Mph1103I	ATGCAT	1 cut(s)	1169
MseI	TTAA	8 cut(s)	165, 339, 362, 735, 954, 959, 1674, 1763
MslI	CAYNNNNRTG	4 cut(s)	31, 680, 723, 1278
MspI	CCGG	2 cut(s)	387, 1634
MspR9I	CCNGG	2 cut(s)	1243, 1686
Mva1269I	GAATGC	1 cut(s)	258
MvaI	CCWGG	2 cut(s)	1243, 1686
MwoI	GCNNNNNNNGC	3 cut(s)	353, 1121, 1289
NcoI	CCATGG	1 cut(s)	993
NdeI	CATATG	1 cut(s)	1588
NdeII	GATC	5 cut(s)	1133, 1146, 1471, 1561, 1738
NheI	GCTAGC	1 cut(s)	1495
NlaIV	GGNNCC	2 cut(s)	689, 1683
NsiI	ATGCAT	1 cut(s)	1169
NspI	RCATGY	6 cut(s)	417, 722, 1102, 1171, 1371, 1438
OliI	CACNNNNGTG	1 cut(s)	31
PaeI	GCATGC	1 cut(s)	1371
PciI	ACATGT	1 cut(s)	413
PcsI	WCGNNNNNNNCGW	1 cut(s)	222
PctI	GAATGC	1 cut(s)	258
PfeI	GAWTC	5 cut(s)	265, 765, 1061, 1225, 1297
PkrI	GCNGC	6 cut(s)	1126, 1129, 1534, 1579, 1582, 1621
Ple19I	CGATCG	1 cut(s)	1741
PscI	ACATGT	1 cut(s)	413
PshBI	ATTAAT	1 cut(s)	1763
PsiI	TTATAA	1 cut(s)	1050
Psp6I	CCWGG	2 cut(s)	1241, 1684
PspFI	CCCAGC	1 cut(s)	427
PspGI	CCWGG	2 cut(s)	1241, 1684
PspN4I	GGNNCC	2 cut(s)	689, 1683
PstI	CTGCAG	1 cut(s)	1129
PstNI	CAGNNNCTG	1 cut(s)	1505
PsuI	RGATCY	2 cut(s)	1133, 1146
PvuI	CGATCG	1 cut(s)	1741
RsaI	GTAC	4 cut(s)	206, 278, 833, 1601
RsaNI	GTAC	4 cut(s)	205, 277, 832, 1600
RseI	CAYNNNNRTG	4 cut(s)	31, 680, 723, 1278
SaqAI	TTAA	8 cut(s)	165, 339, 362, 735, 954, 959, 1674, 1763
SatI	GCNGC	6 cut(s)	1125, 1128, 1533, 1578, 1581, 1620
Sau3AI	GATC	5 cut(s)	1133, 1146, 1471, 1561, 1738
ScrFI	CCNGG	2 cut(s)	1243, 1686
SduI	GDGCHC	4 cut(s)	38, 235, 473, 1455
SexAI	ACCWGGT	1 cut(s)	1684
SfaNI	GCATC	5 cut(s)	741, 938, 1492, 1592, 1606
SfcI	CTRYAG	2 cut(s)	872, 1125
SmiMI	CAYNNNNRTG	4 cut(s)	31, 680, 723, 1278
SmlI	CTYRAG	3 cut(s)	827, 852, 1572
SmoI	CTYRAG	3 cut(s)	827, 852, 1572
SphI	GCATGC	1 cut(s)	1371
SsiI	CCGC	3 cut(s)	15, 262, 652
SspI	AATATT	1 cut(s)	633
SspMI	CTAG	7 cut(s)	210, 761, 966, 971, 1385, 1478, 1496
StyD4I	CCNGG	2 cut(s)	1241, 1684
StyI	CCWWGG	5 cut(s)	965, 993, 1150, 1351, 1477
TaaI	ACNGT	4 cut(s)	230, 917, 1457, 1528
TaiI	ACGT	1 cut(s)	1543
TaqI	TCGA	4 cut(s)	66, 225, 246, 1666
TaqII	GACCGA	1 cut(s)	1731
TatI	WGTACW	2 cut(s)	204, 1599
TfiI	GAWTC	5 cut(s)	265, 765, 1061, 1225, 1297
Tru1I	TTAA	8 cut(s)	165, 339, 362, 735, 954, 959, 1674, 1763
Tru9I	TTAA	8 cut(s)	165, 339, 362, 735, 954, 959, 1674, 1763
TscAI	CASTG	4 cut(s)	38, 235, 1460, 1531
TseI	GCWGC	6 cut(s)	1124, 1127, 1532, 1577, 1580, 1619
TspRI	CASTG	4 cut(s)	38, 235, 1460, 1531
VneI	GTGCAC	1 cut(s)	231
VspI	ATTAAT	1 cut(s)	1763
XapI	RAATTY	5 cut(s)	221, 492, 638, 884, 1082
XceI	RCATGY	6 cut(s)	417, 722, 1102, 1171, 1371, 1438
XmaJI	CCTAGG	2 cut(s)	965, 1477
XmiI	GTMKAC	1 cut(s)	858
XspI	CTAG	7 cut(s)	210, 761, 966, 971, 1385, 1478, 1496
Zsp2I	ATGCAT	1 cut(s)	1169

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.