Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G13880 |
| malus_domestica | MD15G1395900.v1.1 MD15G1396200.v1.1 MD15G1407400.v1.1 |
| prunus_persica | Prupe.1G554200_v2.0.a1 |
| pyrus_communis | pycom15g35640 pycom15g36360 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1851 |
| Acc36I | ACCTGC | 2 cut(s) | 1101, 1214 |
| AccI | GTMKAC | 1 cut(s) | 2190 |
| AciI | CCGC | 2 cut(s) | 405, 519 |
| AclWI | GGATC | 4 cut(s) | 85, 1363, 2083, 2342 |
| AcsI | RAATTY | 9 cut(s) | 553, 583, 714, 1106, 1304, 1403, 1420, 1777, 2206 |
| AdeI | CACNNNGTG | 1 cut(s) | 151 |
| AfaI | GTAC | 6 cut(s) | 98, 206, 509, 1088, 1716, 1934 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 111 |
| AflII | CTTAAG | 1 cut(s) | 698 |
| AflIII | ACRYGT | 1 cut(s) | 1873 |
| AgeI | ACCGGT | 1 cut(s) | 827 |
| AjnI | CCWGG | 4 cut(s) | 303, 1508, 1743, 2017 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2034, 2066 |
| Alw26I | GTCTC | 4 cut(s) | 580, 1207, 1446, 1478 |
| AlwI | GGATC | 4 cut(s) | 85, 1363, 2083, 2342 |
| ApeKI | GCWGC | 6 cut(s) | 708, 1346, 1349, 1865, 1910, 1913 |
| ApoI | RAATTY | 9 cut(s) | 553, 583, 714, 1106, 1304, 1403, 1420, 1777, 2206 |
| AseI | ATTAAT | 2 cut(s) | 1893, 2096 |
| AsiGI | ACCGGT | 1 cut(s) | 827 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2309 |
| AspA2I | CCTAGG | 1 cut(s) | 1187 |
| AspLEI | GCGC | 2 cut(s) | 1537, 1733 |
| AspS9I | GGNCC | 2 cut(s) | 1512, 2162 |
| AsuHPI | GGTGA | 7 cut(s) | 163, 655, 842, 851, 2072, 2081, 2272 |
| AvaII | GGWCC | 2 cut(s) | 1512, 2162 |
| AvrII | CCTAGG | 1 cut(s) | 1187 |
| AxyI | CCTNAGG | 1 cut(s) | 1905 |
| BaeGI | GKGCMC | 1 cut(s) | 697 |
| BanII | GRGCYC | 1 cut(s) | 473 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1650, 1682, 2140, 2172 |
| BbvI | GCAGC | 6 cut(s) | 695, 1333, 1361, 1852, 1897, 1900 |
| BccI | CCATC | 2 cut(s) | 57, 2369 |
| BceAI | ACGGC | 1 cut(s) | 142 |
| BciT130I | CCWGG | 4 cut(s) | 305, 1510, 1745, 2019 |
| BclI | TGATCA | 2 cut(s) | 529, 2071 |
| BcoDI | GTCTC | 4 cut(s) | 580, 1207, 1446, 1478 |
| BfaI | CTAG | 5 cut(s) | 597, 983, 1188, 1193, 1763 |
| BfmI | CTRYAG | 3 cut(s) | 1094, 1347, 1525 |
| BfrI | CTTAAG | 1 cut(s) | 698 |
| BfuAI | ACCTGC | 2 cut(s) | 1101, 1214 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 701 |
| BisI | GCNGC | 7 cut(s) | 520, 709, 1347, 1350, 1866, 1911, 1914 |
| BlnI | CCTAGG | 1 cut(s) | 1187 |
| BlsI | GCNGC | 7 cut(s) | 521, 710, 1348, 1351, 1867, 1912, 1915 |
| BmcAI | AGTACT | 1 cut(s) | 98 |
| Bme1390I | CCNGG | 4 cut(s) | 305, 1510, 1745, 2019 |
| Bme18I | GGWCC | 2 cut(s) | 1512, 2162 |
| BmgT120I | GGNCC | 2 cut(s) | 1512, 2162 |
| BmiI | GGNNCC | 2 cut(s) | 911, 2016 |
| BmrFI | CCNGG | 4 cut(s) | 305, 1510, 1745, 2019 |
| BmrI | ACTGGG | 3 cut(s) | 120, 695, 779 |
| BmsI | GCATC | 8 cut(s) | 661, 832, 963, 1150, 1292, 1759, 1925, 1939 |
| BmuI | ACTGGG | 3 cut(s) | 120, 695, 779 |
| BpmI | CTGGAG | 3 cut(s) | 1380, 1470, 2235 |
| BpuEI | CTTGAG | 2 cut(s) | 1059, 2293 |
| Bsa29I | ATCGAT | 1 cut(s) | 1128 |
| BsaJI | CCNNGG | 7 cut(s) | 124, 303, 1187, 1215, 1372, 1560, 1744 |
| BsaWI | WCCGGW | 1 cut(s) | 827 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1638, 1668 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 111 |
| Bse118I | RCCGGY | 1 cut(s) | 827 |
| Bse1I | ACTGG | 8 cut(s) | 94, 115, 361, 690, 774, 1811, 2252, 2405 |
| Bse21I | CCTNAGG | 1 cut(s) | 1905 |
| Bse3DI | GCAATG | 3 cut(s) | 43, 333, 803 |
| BseBI | CCWGG | 4 cut(s) | 305, 1510, 1745, 2019 |
| BseCI | ATCGAT | 1 cut(s) | 1128 |
| BseDI | CCNNGG | 7 cut(s) | 124, 303, 1187, 1215, 1372, 1560, 1744 |
| BseGI | GGATG | 7 cut(s) | 49, 574, 790, 1165, 1211, 1550, 1774 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 111 |
| BseMI | GCAATG | 3 cut(s) | 43, 333, 803 |
| BseMII | CTCAG | 5 cut(s) | 486, 983, 1806, 1919, 2328 |
| BseNI | ACTGG | 8 cut(s) | 94, 115, 361, 690, 774, 1811, 2252, 2405 |
| BseRI | GAGGAG | 1 cut(s) | 2016 |
| BseSI | GKGCMC | 1 cut(s) | 697 |
| BseXI | GCAGC | 6 cut(s) | 695, 1333, 1361, 1852, 1897, 1900 |
| BseYI | CCCAGC | 3 cut(s) | 427, 522, 905 |
| BshTI | ACCGGT | 1 cut(s) | 827 |
| BshVI | ATCGAT | 1 cut(s) | 1128 |
| BsiSI | CCGG | 1 cut(s) | 828 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 111 |
| BsmAI | GTCTC | 4 cut(s) | 580, 1207, 1446, 1478 |
| Bsp1286I | GDGCHC | 2 cut(s) | 473, 697 |
| Bsp1407I | TGTACA | 2 cut(s) | 1714, 1932 |
| Bsp19I | CCATGG | 1 cut(s) | 1215 |
| BspACI | CCGC | 2 cut(s) | 405, 519 |
| BspCNI | CTCAG | 5 cut(s) | 485, 982, 1805, 1918, 2327 |
| BspDI | ATCGAT | 1 cut(s) | 1128 |
| BspHI | TCATGA | 1 cut(s) | 1683 |
| BspLI | GGNNCC | 2 cut(s) | 911, 2016 |
| BspMAI | CTGCAG | 2 cut(s) | 1098, 1351 |
| BspMI | ACCTGC | 2 cut(s) | 1101, 1214 |
| BspPI | GGATC | 4 cut(s) | 85, 1363, 2083, 2342 |
| BspTI | CTTAAG | 1 cut(s) | 698 |
| BsrDI | GCAATG | 3 cut(s) | 43, 333, 803 |
| BsrFI | RCCGGY | 1 cut(s) | 827 |
| BsrGI | TGTACA | 2 cut(s) | 1714, 1932 |
| BsrI | ACTGG | 8 cut(s) | 94, 115, 361, 690, 774, 1811, 2252, 2405 |
| BssAI | RCCGGY | 1 cut(s) | 827 |
| BssECI | CCNNGG | 7 cut(s) | 124, 303, 1187, 1215, 1372, 1560, 1744 |
| BssNAI | GTATAC | 1 cut(s) | 2191 |
| BssT1I | CCWWGG | 4 cut(s) | 1187, 1215, 1372, 1560 |
| Bst1107I | GTATAC | 1 cut(s) | 2191 |
| Bst2UI | CCWGG | 4 cut(s) | 305, 1510, 1745, 2019 |
| Bst4CI | ACNGT | 6 cut(s) | 763, 875, 1356, 1724, 1861, 2201 |
| Bst6I | CTCTTC | 1 cut(s) | 1144 |
| BstAFI | CTTAAG | 1 cut(s) | 698 |
| BstAUI | TGTACA | 2 cut(s) | 1714, 1932 |
| BstDEI | CTNAG | 9 cut(s) | 458, 472, 969, 1022, 1792, 1905, 2024, 2314, 2342 |
| BstDSI | CCRYGG | 2 cut(s) | 124, 1215 |
| BstF5I | GGATG | 7 cut(s) | 49, 574, 790, 1165, 1211, 1550, 1774 |
| BstHHI | GCGC | 2 cut(s) | 1537, 1733 |
| BstMAI | GTCTC | 4 cut(s) | 580, 1207, 1446, 1478 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 54, 433, 602, 701, 902, 1343, 1388, 1556, 2289 |
| BstNI | CCWGG | 4 cut(s) | 305, 1510, 1745, 2019 |
| BstNSI | RCATGY | 8 cut(s) | 237, 708, 944, 1324, 1335, 1438, 1638, 2385 |
| BstSCI | CCNGG | 4 cut(s) | 303, 1508, 1743, 2017 |
| BstSFI | CTRYAG | 3 cut(s) | 1094, 1347, 1525 |
| BstSLI | GKGCMC | 1 cut(s) | 697 |
| BstV1I | GCAGC | 6 cut(s) | 695, 1333, 1361, 1852, 1897, 1900 |
| BstX2I | RGATCY | 2 cut(s) | 1368, 2347 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1818 |
| BstYI | RGATCY | 2 cut(s) | 1368, 2347 |
| BstZ17I | GTATAC | 1 cut(s) | 2191 |
| Bsu15I | ATCGAT | 1 cut(s) | 1128 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1905 |
| BsuTUI | ATCGAT | 1 cut(s) | 1128 |
| BtgI | CCRYGG | 2 cut(s) | 124, 1215 |
| BtsCI | GGATG | 7 cut(s) | 49, 574, 790, 1165, 1211, 1550, 1774 |
| BtsIMutI | CAGTG | 5 cut(s) | 683, 1720, 1857, 2206, 2259 |
| BveI | ACCTGC | 2 cut(s) | 1101, 1214 |
| CciI | TCATGA | 1 cut(s) | 1683 |
| CfoI | GCGC | 2 cut(s) | 1537, 1733 |
| Cfr10I | RCCGGY | 1 cut(s) | 827 |
| Cfr13I | GGNCC | 2 cut(s) | 1512, 2162 |
| ClaI | ATCGAT | 1 cut(s) | 1128 |
| CsiI | ACCWGGT | 1 cut(s) | 2017 |
| Csp6I | GTAC | 6 cut(s) | 97, 205, 508, 1087, 1715, 1933 |
| CspAI | ACCGGT | 1 cut(s) | 827 |
| CviQI | GTAC | 6 cut(s) | 97, 205, 508, 1087, 1715, 1933 |
| DdeI | CTNAG | 9 cut(s) | 458, 472, 969, 1022, 1792, 1905, 2024, 2314, 2342 |
| DraIII | CACNNNGTG | 1 cut(s) | 151 |
| Eam1104I | CTCTTC | 1 cut(s) | 1144 |
| EarI | CTCTTC | 1 cut(s) | 1144 |
| Eco130I | CCWWGG | 4 cut(s) | 1187, 1215, 1372, 1560 |
| Eco24I | GRGCYC | 1 cut(s) | 473 |
| Eco47I | GGWCC | 2 cut(s) | 1512, 2162 |
| Eco81I | CCTNAGG | 1 cut(s) | 1905 |
| EcoRI | GAATTC | 4 cut(s) | 553, 583, 1106, 1304 |
| EcoRII | CCWGG | 4 cut(s) | 303, 1508, 1743, 2017 |
| EcoT14I | CCWWGG | 4 cut(s) | 1187, 1215, 1372, 1560 |
| EcoT22I | ATGCAT | 1 cut(s) | 654 |
| EcoT38I | GRGCYC | 1 cut(s) | 473 |
| ErhI | CCWWGG | 4 cut(s) | 1187, 1215, 1372, 1560 |
| FbaI | TGATCA | 2 cut(s) | 529, 2071 |
| FblI | GTMKAC | 1 cut(s) | 2190 |
| Fnu4HI | GCNGC | 7 cut(s) | 520, 709, 1347, 1350, 1866, 1911, 1914 |
| FokI | GGATG | 7 cut(s) | 36, 581, 797, 1172, 1198, 1557, 1781 |
| FriOI | GRGCYC | 1 cut(s) | 473 |
| Fsp4HI | GCNGC | 7 cut(s) | 520, 709, 1347, 1350, 1866, 1911, 1914 |
| FspBI | CTAG | 5 cut(s) | 597, 983, 1188, 1193, 1763 |
| GlaI | GCGC | 2 cut(s) | 1536, 1732 |
| GluI | GCNGC | 7 cut(s) | 520, 709, 1347, 1350, 1866, 1911, 1914 |
| GsaI | CCCAGC | 3 cut(s) | 431, 526, 909 |
| GsuI | CTGGAG | 3 cut(s) | 1380, 1470, 2235 |
| HapII | CCGG | 1 cut(s) | 828 |
| HhaI | GCGC | 2 cut(s) | 1537, 1733 |
| Hin6I | GCGC | 2 cut(s) | 1535, 1731 |
| HinP1I | GCGC | 2 cut(s) | 1535, 1731 |
| HindIII | AAGCTT | 2 cut(s) | 131, 1044 |
| HinfI | GANTC | 3 cut(s) | 1460, 1492, 2277 |
| HpaII | CCGG | 1 cut(s) | 828 |
| HphI | GGTGA | 7 cut(s) | 163, 655, 842, 851, 2072, 2081, 2272 |
| Hpy166II | GTNNAC | 6 cut(s) | 124, 378, 1069, 1121, 1667, 2191 |
| Hpy188I | TCNGA | 8 cut(s) | 475, 559, 730, 972, 1629, 2287, 2317, 2372 |
| Hpy8I | GTNNAC | 6 cut(s) | 124, 378, 1069, 1121, 1667, 2191 |
| HpyAV | CCTTC | 3 cut(s) | 1655, 1752, 2005 |
| HpyCH4III | ACNGT | 6 cut(s) | 763, 875, 1356, 1724, 1861, 2201 |
| HpyCH4IV | ACGT | 3 cut(s) | 926, 1613, 1873 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 54, 433, 602, 701, 902, 1343, 1388, 1556, 2289 |
| HpyF3I | CTNAG | 9 cut(s) | 458, 472, 969, 1022, 1792, 1905, 2024, 2314, 2342 |
| HpySE526I | ACGT | 3 cut(s) | 926, 1613, 1873 |
| HspAI | GCGC | 2 cut(s) | 1535, 1731 |
| Ksp22I | TGATCA | 2 cut(s) | 529, 2071 |
| LmnI | GCTCC | 1 cut(s) | 2254 |
| Lsp1109I | GCAGC | 6 cut(s) | 695, 1333, 1361, 1852, 1897, 1900 |
| LweI | GCATC | 8 cut(s) | 661, 832, 963, 1150, 1292, 1759, 1925, 1939 |
| MabI | ACCWGGT | 1 cut(s) | 2017 |
| MaeI | CTAG | 5 cut(s) | 597, 983, 1188, 1193, 1763 |
| MaeII | ACGT | 3 cut(s) | 926, 1613, 1873 |
| MaeIII | GTNAC | 5 cut(s) | 73, 352, 416, 1962, 2215 |
| MflI | RGATCY | 2 cut(s) | 1368, 2347 |
| MhlI | GDGCHC | 2 cut(s) | 473, 697 |
| MlyI | GAGTC | 1 cut(s) | 2286 |
| MmeI | TCCRAC | 3 cut(s) | 756, 2009, 2091 |
| Mph1103I | ATGCAT | 1 cut(s) | 654 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2309 |
| MslI | CAYNNNNRTG | 3 cut(s) | 657, 945, 1545 |
| MspCI | CTTAAG | 1 cut(s) | 698 |
| MspI | CCGG | 1 cut(s) | 828 |
| MspR9I | CCNGG | 4 cut(s) | 305, 1510, 1745, 2019 |
| MvaI | CCWGG | 4 cut(s) | 305, 1510, 1745, 2019 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 54, 433, 602, 701, 902, 1343, 1388, 1556, 2289 |
| NcoI | CCATGG | 1 cut(s) | 1215 |
| NlaIV | GGNNCC | 2 cut(s) | 911, 2016 |
| NmuCI | GTSAC | 1 cut(s) | 352 |
| NsiI | ATGCAT | 1 cut(s) | 654 |
| NspI | RCATGY | 8 cut(s) | 237, 708, 944, 1324, 1335, 1438, 1638, 2385 |
| PaeI | GCATGC | 4 cut(s) | 237, 708, 944, 1638 |
| PagI | TCATGA | 1 cut(s) | 1683 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2309 |
| PfeI | GAWTC | 2 cut(s) | 1460, 1492 |
| PinAI | ACCGGT | 1 cut(s) | 827 |
| PkrI | GCNGC | 7 cut(s) | 521, 710, 1348, 1351, 1867, 1912, 1915 |
| PleI | GAGTC | 1 cut(s) | 2285 |
| PpsI | GAGTC | 1 cut(s) | 2285 |
| PshBI | ATTAAT | 2 cut(s) | 1893, 2096 |
| PsiI | TTATAA | 1 cut(s) | 1851 |
| Psp6I | CCWGG | 4 cut(s) | 303, 1508, 1743, 2017 |
| PspFI | CCCAGC | 3 cut(s) | 427, 522, 905 |
| PspGI | CCWGG | 4 cut(s) | 303, 1508, 1743, 2017 |
| PspN4I | GGNNCC | 2 cut(s) | 911, 2016 |
| PspPI | GGNCC | 2 cut(s) | 1512, 2162 |
| PstI | CTGCAG | 2 cut(s) | 1098, 1351 |
| PsuI | RGATCY | 2 cut(s) | 1368, 2347 |
| RsaI | GTAC | 6 cut(s) | 98, 206, 509, 1088, 1716, 1934 |
| RsaNI | GTAC | 6 cut(s) | 97, 205, 508, 1087, 1715, 1933 |
| RseI | CAYNNNNRTG | 3 cut(s) | 657, 945, 1545 |
| SatI | GCNGC | 7 cut(s) | 520, 709, 1347, 1350, 1866, 1911, 1914 |
| Sau96I | GGNCC | 2 cut(s) | 1512, 2162 |
| SbfI | CCTGCAGG | 1 cut(s) | 1098 |
| ScaI | AGTACT | 1 cut(s) | 98 |
| SchI | GAGTC | 1 cut(s) | 2286 |
| ScrFI | CCNGG | 4 cut(s) | 305, 1510, 1745, 2019 |
| SdaI | CCTGCAGG | 1 cut(s) | 1098 |
| SduI | GDGCHC | 2 cut(s) | 473, 697 |
| SexAI | ACCWGGT | 1 cut(s) | 2017 |
| SfaNI | GCATC | 8 cut(s) | 661, 832, 963, 1150, 1292, 1759, 1925, 1939 |
| SfcI | CTRYAG | 3 cut(s) | 1094, 1347, 1525 |
| SinI | GGWCC | 2 cut(s) | 1512, 2162 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 657, 945, 1545 |
| SmlI | CTYRAG | 3 cut(s) | 698, 1074, 2272 |
| SmoI | CTYRAG | 3 cut(s) | 698, 1074, 2272 |
| SphI | GCATGC | 4 cut(s) | 237, 708, 944, 1638 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1098 |
| SsiI | CCGC | 2 cut(s) | 405, 519 |
| SspI | AATATT | 1 cut(s) | 855 |
| SspMI | CTAG | 5 cut(s) | 597, 983, 1188, 1193, 1763 |
| StyD4I | CCNGG | 4 cut(s) | 303, 1508, 1743, 2017 |
| StyI | CCWWGG | 4 cut(s) | 1187, 1215, 1372, 1560 |
| TaaI | ACNGT | 6 cut(s) | 763, 875, 1356, 1724, 1861, 2201 |
| TaiI | ACGT | 3 cut(s) | 929, 1616, 1876 |
| TaqI | TCGA | 4 cut(s) | 607, 1128, 1316, 1999 |
| TatI | WGTACW | 6 cut(s) | 96, 204, 507, 1086, 1714, 1932 |
| TauI | GCSGC | 1 cut(s) | 522 |
| TfiI | GAWTC | 2 cut(s) | 1460, 1492 |
| TscAI | CASTG | 5 cut(s) | 690, 1727, 1864, 2206, 2259 |
| TseFI | GTSAC | 1 cut(s) | 352 |
| TseI | GCWGC | 6 cut(s) | 708, 1346, 1349, 1865, 1910, 1913 |
| Tsp45I | GTSAC | 1 cut(s) | 352 |
| TspGWI | ACGGA | 1 cut(s) | 1504 |
| TspRI | CASTG | 5 cut(s) | 690, 1727, 1864, 2206, 2259 |
| Vha464I | CTTAAG | 1 cut(s) | 698 |
| VpaK11BI | GGWCC | 2 cut(s) | 1512, 2162 |
| VspI | ATTAAT | 2 cut(s) | 1893, 2096 |
| XapI | RAATTY | 9 cut(s) | 553, 583, 714, 1106, 1304, 1403, 1420, 1777, 2206 |
| XceI | RCATGY | 8 cut(s) | 237, 708, 944, 1324, 1335, 1438, 1638, 2385 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 496 |
| XmaJI | CCTAGG | 1 cut(s) | 1187 |
| XmiI | GTMKAC | 1 cut(s) | 2190 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2309 |
| XspI | CTAG | 5 cut(s) | 597, 983, 1188, 1193, 1763 |
| ZrmI | AGTACT | 1 cut(s) | 98 |
| Zsp2I | ATGCAT | 1 cut(s) | 654 |